SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    553001 6tcl:J2 (3.2) BS03 CLA ? GO:0009522 ... P58568 32170279
    553002 6tcl:J2 (3.2) BS04 CLA ? GO:0009522 ... P58568 32170279
    553003 6tcl:J2 (3.2) BS05 CLA ? GO:0009522 ... P58568 32170279
    553004 6tcl:JJ (3.2) BS01 CLA ? GO:0009522 ... P58568 32170279
    553005 6tcl:JJ (3.2) BS02 CLA ? GO:0009522 ... P58568 32170279
    553006 6tcl:JJ (3.2) BS03 CLA ? GO:0009522 ... P58568 32170279
    553007 6tcl:JJ (3.2) BS04 CLA ? GO:0009522 ... P58568 32170279
    553008 6tcl:K (3.2) BS01 CLA ? GO:0009522 ... P58583 32170279
    553009 6tcl:K (3.2) BS02 CLA ? GO:0009522 ... P58583 32170279
    553010 6tcl:K (3.2) BS03 CLA ? GO:0009522 ... P58583 32170279
    553011 6tcl:K1 (3.2) BS01 CLA ? GO:0009522 ... P58583 32170279
    553012 6tcl:K1 (3.2) BS02 CLA ? GO:0009522 ... P58583 32170279
    553013 6tcl:K1 (3.2) BS03 CLA ? GO:0009522 ... P58583 32170279
    553014 6tcl:K2 (3.2) BS01 CLA ? GO:0009522 ... P58583 32170279
    553015 6tcl:K2 (3.2) BS02 CLA ? GO:0009522 ... P58583 32170279
    553016 6tcl:K2 (3.2) BS03 CLA ? GO:0009522 ... P58583 32170279
    553017 6tcl:K2 (3.2) BS04 CLA ? GO:0009522 ... P58583 32170279
    553018 6tcl:K2 (3.2) BS05 CLA ? GO:0009522 ... P58583 32170279
    553019 6tcl:KK (3.2) BS01 CLA ? GO:0009522 ... P58583 32170279
    553020 6tcl:KK (3.2) BS02 CLA ? GO:0009522 ... P58583 32170279
    553021 6tcl:KK (3.2) BS03 CLA ? GO:0009522 ... P58583 32170279
    553022 6tcl:KK (3.2) BS04 CLA ? GO:0009522 ... P58583 32170279
    553023 6tcl:L (3.2) BS01 CLA ? GO:0009522 ... P58577 32170279
    553024 6tcl:L (3.2) BS02 CLA ? GO:0009522 ... P58577 32170279
    553025 6tcl:L (3.2) BS03 CLA ? GO:0009522 ... P58577 32170279
    553026 6tcl:L (3.2) BS04 CLA ? GO:0009522 ... P58577 32170279
    553027 6tcl:L (3.2) BS05 CLA ? GO:0009522 ... P58577 32170279
    553028 6tcl:L (3.2) BS06 CLA ? GO:0009522 ... P58577 32170279
    553029 6tcl:L (3.2) BS07 AJP ? GO:0009522 ... P58577 32170279
    553030 6tcl:L1 (3.2) BS01 CLA ? GO:0009522 ... P58577 32170279
    553031 6tcl:L1 (3.2) BS02 CLA ? GO:0009522 ... P58577 32170279
    553032 6tcl:L1 (3.2) BS03 CLA ? GO:0009522 ... P58577 32170279
    553033 6tcl:L1 (3.2) BS04 AJP ? GO:0009522 ... P58577 32170279
    553034 6tcl:L1 (3.2) BS05 AJP ? GO:0009522 ... P58577 32170279
    553035 6tcl:L1 (3.2) BS06 CLA ? GO:0009522 ... P58577 32170279
    553036 6tcl:L1 (3.2) BS07 CLA ? GO:0009522 ... P58577 32170279
    553037 6tcl:L1 (3.2) BS08 CLA ? GO:0009522 ... P58577 32170279
    553038 6tcl:L1 (3.2) BS09 CLA ? GO:0009522 ... P58577 32170279
    553039 6tcl:L2 (3.2) BS01 CLA ? GO:0009522 ... P58577 32170279
    553040 6tcl:L2 (3.2) BS02 CLA ? GO:0009522 ... P58577 32170279
    553041 6tcl:L2 (3.2) BS03 CLA ? GO:0009522 ... P58577 32170279
    553042 6tcl:L2 (3.2) BS04 AJP ? GO:0009522 ... P58577 32170279
    553043 6tcl:L2 (3.2) BS05 AJP ? GO:0009522 ... P58577 32170279
    553044 6tcl:L2 (3.2) BS06 CLA ? GO:0009522 ... P58577 32170279
    553045 6tcl:L2 (3.2) BS07 CLA ? GO:0009522 ... P58577 32170279
    553046 6tcl:L2 (3.2) BS08 CLA ? GO:0009522 ... P58577 32170279
    553047 6tcl:L2 (3.2) BS09 CLA ? GO:0009522 ... P58577 32170279
    553048 6tcl:LL (3.2) BS01 AJP ? GO:0009522 ... P58577 32170279
    553049 6tcl:LL (3.2) BS02 CLA ? GO:0009522 ... P58577 32170279
    553050 6tcl:LL (3.2) BS03 CLA ? GO:0009522 ... P58577 32170279
    553051 6tcl:LL (3.2) BS04 CLA ? GO:0009522 ... P58577 32170279
    553052 6tcl:LL (3.2) BS05 CLA ? GO:0009522 ... P58577 32170279
    553053 6tcl:LL (3.2) BS06 CLA ? GO:0009522 ... P58577 32170279
    553054 6tcl:LL (3.2) BS07 CLA ? GO:0009522 ... P58577 32170279
    553055 6tcl:LL (3.2) BS08 CLA ? GO:0009522 ... P58577 32170279
    553056 6tcl:M (3.2) BS01 CLA ? GO:0009522 ... Q8YNB0 32170279
    553057 6tcl:M1 (3.2) BS01 CLA ? GO:0009522 ... Q8YNB0 32170279
    553058 6tcl:M2 (3.2) BS01 CLA ? GO:0009522 ... Q8YNB0 32170279
    553059 6tcl:MM (3.2) BS01 CLA ? GO:0009522 ... Q8YNB0 32170279
    553060 6tcl:X (3.2) BS01 CLA ? N/A P58566 32170279
    553061 6tcl:X1 (3.2) BS01 CLA ? N/A P58566 32170279
    553062 6tcl:X2 (3.2) BS01 CLA ? N/A P58566 32170279
    553063 6tcl:X2 (3.2) BS02 CLA ? N/A P58566 32170279
    553064 6tcl:XX (3.2) BS01 CLA ? N/A P58566 32170279
    553065 6tcu:A (2.14) BS01 N1Q 2.7.11.1
    2.7.11.26
    GO:0004672 ... P49841 32435391 MOAD: ic50=0.018uM
    BindingDB: IC50=20.0nM
    553066 6tcv:B (1.311) BS01 BMA ? GO:0046872 ... Q8A0N4 32060313
    553067 6tcv:B (1.311) BS02 MAN ? GO:0046872 ... Q8A0N4 32060313
    553068 6tcv:B (1.311) BS03 MAN ? GO:0046872 ... Q8A0N4 32060313
    553069 6tcv:B (1.311) BS04 MAN ? GO:0046872 ... Q8A0N4 32060313
    553070 6tcv:B (1.311) BS05 MAN ? GO:0046872 ... Q8A0N4 32060313
    553071 6tcw:A (1.599) BS01 BMA ? GO:0046872 ... Q8A0N4 32060313
    553072 6tcw:A (1.599) BS02 MAN ? GO:0046872 ... Q8A0N4 32060313
    553073 6tcw:A (1.599) BS03 MAN ? GO:0046872 ... Q8A0N4 32060313
    553074 6tcw:A (1.599) BS04 MAN ? GO:0046872 ... Q8A0N4 32060313
    553075 6tcx:AAA (1.65) BS01 N1W 3.4.22.2 GO:0006508 ... P00784 32998509
    553076 6tcy:AAA (1.6) BS01 ZN ? N/A F8W4B7 32815366
    553077 6tcy:AAA (1.6) BS02 N28 ? N/A F8W4B7 32815366
    553078 6tcy:BBB (1.6) BS01 ZN ? N/A F8W4B7 32815366
    553079 6tcy:BBB (1.6) BS02 N28 ? N/A F8W4B7 32815366
    553080 6tcy:BBB (1.6) BS03 MXE ? N/A F8W4B7 32815366
    553081 6tcz:K (3.4) BS01 N2E ? GO:0005839 ... A0A504XH29 32667203
    553082 6tcz:L (3.4) BS01 N2E 3.4.25.1 GO:0000502 ... A0A3Q8IIY4 32667203
    553083 6tcz:k (3.4) BS01 N2E ? GO:0005839 ... A0A504XH29 32667203
    553084 6tcz:l (3.4) BS01 N2E 3.4.25.1 GO:0000502 ... A0A3Q8IIY4 32667203
    553085 6td0:A (0.99) BS01 4D6 3.5.2.6 GO:0008800 ... Q9F663 33479650
    553086 6td1:A (1.2) BS01 KJK 3.5.2.6 GO:0008800 ... Q9F663 33479650
    553087 6td2:A (2.8) BS01 N2K 3.1.1.7 GO:0001919 ... P21836 32610016 BindingDB: Kd=9200nM, IC50=12000nM
    553088 6td2:B (2.8) BS01 N2K 3.1.1.7 GO:0001919 ... P21836 32610016 BindingDB: Kd=9200nM, IC50=12000nM
    553089 6td3:A (3.46) BS01 RC8 ? GO:0003676 ... Q16531 32494016
    553090 6td3:B (3.46) BS01 RC8 2.7.11.22
    2.7.11.23
    GO:0004672 ... Q9NYV4 32494016
    553091 6td3:D (3.46) BS01 RC8 ? GO:0003676 ... Q16531 32494016
    553092 6td3:E (3.46) BS01 RC8 2.7.11.22
    2.7.11.23
    GO:0004672 ... Q9NYV4 32494016
    553093 6td3:G (3.46) BS01 RC8 ? GO:0003676 ... Q16531 32494016
    553094 6td3:H (3.46) BS01 RC8 2.7.11.22
    2.7.11.23
    GO:0004672 ... Q9NYV4 32494016
    553095 6td5:H (3.2) BS01 BO2 3.4.25.1 GO:0004298 ... A0A504X6A3 32667203
    553096 6td5:I (3.2) BS01 BO2 3.4.25.1 GO:0004298 ... A0A3Q8IVH0 32667203
    553097 6td5:K (3.2) BS01 N2E ? GO:0005839 ... A0A504XH29 32667203
    553098 6td5:L (3.2) BS01 BO2 3.4.25.1 GO:0004298 ... A0A3Q8IIY4 32667203
    553099 6td5:L (3.2) BS02 N2E 3.4.25.1 GO:0004298 ... A0A3Q8IIY4 32667203
    553100 6td5:h (3.2) BS01 BO2 3.4.25.1 GO:0004298 ... A0A504X6A3 32667203
    553101 6td5:i (3.2) BS01 BO2 3.4.25.1 GO:0004298 ... A0A3Q8IVH0 32667203
    553102 6td5:l (3.2) BS01 BO2 3.4.25.1 GO:0004298 ... A0A3Q8IIY4 32667203
    553103 6td5:l (3.2) BS02 N2E 3.4.25.1 GO:0004298 ... A0A3Q8IIY4 32667203
    553104 6td7:A (1.75) BS01 HEM ? GO:0019825 ... A0A2K3CTN8 32048044
    553105 6td8:A (0.97) BS01 30L 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    553106 6td8:A (0.97) BS02 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    553107 6tda:A (15.0) BS01 dna ? GO:0000786 ... P84233 32188943
    553108 6tda:B (15.0) BS01 dna ? GO:0000786 ... P62799 32188943
    553109 6tda:B (15.0) BS02 dna ? GO:0000786 ... P62799 32188943
    553110 6tda:C (15.0) BS01 dna ? GO:0000786 ... P06897 32188943
    553111 6tda:C (15.0) BS02 dna ? GO:0000786 ... P06897 32188943
    553112 6tda:D (15.0) BS01 dna ? GO:0000786 ... P02281 32188943
    553113 6tda:D (15.0) BS02 dna ? GO:0000786 ... P02281 32188943
    553114 6tda:E (15.0) BS01 dna ? GO:0000786 ... P84233 32188943
    553115 6tda:E (15.0) BS02 dna ? GO:0000786 ... P84233 32188943
    553116 6tda:F (15.0) BS01 dna ? GO:0000786 ... P62799 32188943
    553117 6tda:F (15.0) BS02 dna ? GO:0000786 ... P62799 32188943
    553118 6tda:G (15.0) BS01 dna ? GO:0000786 ... P06897 32188943
    553119 6tda:G (15.0) BS02 dna ? GO:0000786 ... P06897 32188943
    553120 6tda:H (15.0) BS01 dna ? GO:0000786 ... P02281 32188943
    553121 6tda:H (15.0) BS02 dna ? GO:0000786 ... P02281 32188943
    553122 6tda:L (15.0) BS01 ZN ? GO:0008270 ... P43609 32188943
    553123 6tda:S (15.0) BS01 dna 3.6.4.12 GO:0000775 ... P32597 32188943
    553124 6tda:S (15.0) BS02 dna 3.6.4.12 GO:0000775 ... P32597 32188943
    553125 6tdb:A (2.45) BS01 peptide ? N/A O60462 N/A
    553126 6tdb:B (2.45) BS01 peptide ? N/A O60462 N/A
    553127 6tdb:C (2.45) BS01 peptide ? N/A O60462 N/A
    553128 6tdb:D (2.45) BS01 peptide ? N/A O60462 N/A
    553129 6tdc:A (2.328) BS01 4F1 ? GO:0003677 ... P37231 N/A BindingDB: IC50=130nM
    553130 6tde:A (2.286) BS01 GTP ? GO:0000226 ... D0VWZ0 32827941
    553131 6tde:A (2.286) BS02 N3Z ? GO:0000226 ... D0VWZ0 32827941
    553132 6tde:B (2.286) BS01 GDP ? GO:0003924 ... D0VWY9 32827941
    553133 6tde:B (2.286) BS02 N3Z ? GO:0003924 ... D0VWY9 32827941
    553134 6tde:C (2.286) BS01 GTP ? GO:0000226 ... D0VWZ0 32827941
    553135 6tde:D (2.286) BS01 GDP ? GO:0003924 ... D0VWY9 32827941
    553136 6tde:D (2.286) BS02 N3Z ? GO:0003924 ... D0VWY9 32827941
    553137 6tdf:A (2.01) BS01 ACO 2.3.1.4 GO:0004343 ... Q4WCU5 32341126
    553138 6tdf:A (2.01) BS02 N3Q 2.3.1.4 GO:0004343 ... Q4WCU5 32341126 MOAD: Kd=5uM
    553139 6tdf:A (2.01) BS03 G6P 2.3.1.4 GO:0004343 ... Q4WCU5 32341126
    553140 6tdg:A (1.74) BS01 ACO 2.3.1.4 GO:0004343 ... Q4WCU5 32341126
    553141 6tdg:A (1.74) BS02 N3W 2.3.1.4 GO:0004343 ... Q4WCU5 32341126 MOAD: Kd=0.8uM
    553142 6tdh:A (1.58) BS01 ACO 2.3.1.4 GO:0004343 ... Q4WCU5 32341126
    553143 6tdh:A (1.58) BS02 N2Z 2.3.1.4 GO:0004343 ... Q4WCU5 32341126 MOAD: Kd=6uM
    553144 6tdo:A (1.65) BS01 GLY ? N/A F6IQS1 32161266
    553145 6tdo:A (1.65) BS02 MET ? N/A F6IQS1 32161266
    553146 6tdp:A (1.4) BS01 GLY ? N/A F6IQS1 32161266
    553147 6tdp:A (1.4) BS02 LEU ? N/A F6IQS1 32161266
    553148 6tdq:A (1.6) BS01 GLY ? N/A F6IQS1 32161266
    553149 6tdq:A (1.6) BS02 MET ? N/A F6IQS1 32161266
    553150 6tdq:A (1.6) BS03 GLY ? N/A F6IQS1 32161266
    553151 6tdq:A (1.6) BS04 MET ? N/A F6IQS1 32161266
    553152 6tdq:C (1.6) BS01 GLY ? N/A F6IQS1 32161266
    553153 6tdq:C (1.6) BS02 MET ? N/A F6IQS1 32161266
    553154 6tdq:C (1.6) BS03 GLY ? N/A F6IQS1 32161266
    553155 6tdq:C (1.6) BS04 MET ? N/A F6IQS1 32161266
    553156 6tdt:H (1.53) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 32011145
    553157 6tdt:H (1.53) BS02 LXW 3.4.21.5 GO:0004252 ... P00734 32011145 MOAD: Ki=1213nM
    553158 6tdu:AA (4.32) BS01 ATP N/A GO:0005524 ... N/A 31738165
    553159 6tdu:AB (4.32) BS01 ATP N/A GO:0005524 ... N/A 31738165
    553160 6tdu:AB (4.32) BS02 MG N/A GO:0005524 ... N/A 31738165
    553161 6tdu:AB (4.32) BS03 TRT N/A GO:0005524 ... N/A 31738165
    553162 6tdu:AB (4.32) BS04 ATP N/A GO:0005524 ... N/A 31738165
    553163 6tdu:AC (4.32) BS01 ATP N/A GO:0005524 ... N/A 31738165
    553164 6tdu:AD (4.32) BS01 ADP N/A GO:0005524 ... N/A 31738165
    553165 6tdu:AE (4.32) BS01 TRT N/A GO:0005524 ... N/A 31738165
    553166 6tdu:AF (4.32) BS01 ATP N/A GO:0005524 ... N/A 31738165
    553167 6tdu:AF (4.32) BS02 MG N/A GO:0005524 ... N/A 31738165
    553168 6tdu:BA (4.32) BS01 ATP N/A GO:0005524 ... N/A 31738165
    553169 6tdu:BB (4.32) BS01 ATP N/A GO:0005524 ... N/A 31738165
    553170 6tdu:BB (4.32) BS02 MG N/A GO:0005524 ... N/A 31738165
    553171 6tdu:BB (4.32) BS03 ATP N/A GO:0005524 ... N/A 31738165
    553172 6tdu:BC (4.32) BS01 ATP N/A GO:0005524 ... N/A 31738165
    553173 6tdu:BD (4.32) BS01 ADP N/A GO:0005524 ... N/A 31738165
    553174 6tdu:BE (4.32) BS01 TRT N/A GO:0005524 ... N/A 31738165
    553175 6tdu:BF (4.32) BS01 ATP N/A GO:0005524 ... N/A 31738165
    553176 6tdu:BF (4.32) BS02 MG N/A GO:0005524 ... N/A 31738165
    553177 6tdu:G (4.32) BS01 TRT N/A N/A N/A 31738165
    553178 6tdu:I (4.32) BS01 TRT N/A N/A N/A 31738165
    553179 6tdu:M (4.32) BS01 TRT N/A N/A N/A 31738165
    553180 6tdu:N (4.32) BS01 TRT N/A N/A N/A 31738165
    553181 6tdu:P (4.32) BS01 TRT N/A N/A N/A 31738165
    553182 6tdu:g (4.32) BS01 TRT N/A N/A N/A 31738165
    553183 6tdu:i (4.32) BS01 TRT N/A N/A N/A 31738165
    553184 6tdu:m (4.32) BS01 TRT N/A N/A N/A 31738165
    553185 6tdu:n (4.32) BS01 TRT N/A N/A N/A 31738165
    553186 6tdu:p (4.32) BS01 TRT N/A N/A N/A 31738165
    553187 6tdv:M (2.8) BS01 TRT N/A N/A N/A 31738165
    553188 6tdv:N (2.8) BS01 TRT N/A N/A N/A 31738165
    553189 6tdv:P (2.8) BS01 TRT N/A N/A N/A 31738165
    553190 6tdv:m (2.8) BS01 TRT N/A N/A N/A 31738165
    553191 6tdv:n (2.8) BS01 TRT N/A N/A N/A 31738165
    553192 6tdv:p (2.8) BS01 TRT N/A N/A N/A 31738165
    553193 6tdw:H (3.8) BS01 peptide N/A N/A N/A 31738165
    553194 6tdw:H (3.8) BS02 peptide N/A N/A N/A 31738165
    553195 6tdw:N (3.8) BS01 peptide N/A N/A N/A 31738165
    553196 6tdy:A (3.04) BS01 ATP N/A GO:0005524 ... N/A 31738165
    553197 6tdy:A (3.04) BS02 MG N/A GO:0005524 ... N/A 31738165
    553198 6tdy:B (3.04) BS01 ATP N/A GO:0005524 ... N/A 31738165
    553199 6tdy:B (3.04) BS02 MG N/A GO:0005524 ... N/A 31738165
    553200 6tdy:B (3.04) BS03 TRT N/A GO:0005524 ... N/A 31738165

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).