SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    555401 6trd:2 (3.16) BS44 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555402 6trd:2 (3.16) BS45 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555403 6trd:2 (3.16) BS46 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555404 6trd:2 (3.16) BS47 PQN 1.97.1.12 GO:0000287 ... P0A407 N/A
    555405 6trd:3 (3.16) BS01 SF4 1.97.1.12 GO:0009055 ... P0A415 N/A
    555406 6trd:3 (3.16) BS02 SF4 1.97.1.12 GO:0009055 ... P0A415 N/A
    555407 6trd:6 (3.16) BS01 CLA ? GO:0009522 ... P0A401 N/A
    555408 6trd:6 (3.16) BS02 CLA ? GO:0009522 ... P0A401 N/A
    555409 6trd:6 (3.16) BS03 CLA ? GO:0009522 ... P0A401 N/A
    555410 6trd:6 (3.16) BS04 CLA ? GO:0009522 ... P0A401 N/A
    555411 6trd:7 (3.16) BS01 CLA ? GO:0009522 ... P0A427 N/A
    555412 6trd:7 (3.16) BS02 CLA ? GO:0009522 ... P0A427 N/A
    555413 6trd:7 (3.16) BS03 CLA ? GO:0009522 ... P0A427 N/A
    555414 6trd:7 (3.16) BS04 CLA ? GO:0009522 ... P0A427 N/A
    555415 6trd:7 (3.16) BS05 CLA ? GO:0009522 ... P0A427 N/A
    555416 6trd:8 (3.16) BS01 CLA ? GO:0009522 ... P0A429 N/A
    555417 6trd:8 (3.16) BS02 CLA ? GO:0009522 ... P0A429 N/A
    555418 6trd:8 (3.16) BS03 CLA ? GO:0009522 ... P0A429 N/A
    555419 6trd:8 (3.16) BS04 CLA ? GO:0009522 ... P0A429 N/A
    555420 6trd:8 (3.16) BS05 CLA ? GO:0009522 ... P0A429 N/A
    555421 6trd:9 (3.16) BS01 CLA ? GO:0009522 ... P0A425 N/A
    555422 6trd:9 (3.16) BS02 CLA ? GO:0009522 ... P0A425 N/A
    555423 6trd:9 (3.16) BS03 CLA ? GO:0009522 ... P0A425 N/A
    555424 6trd:A (3.16) BS01 CL0 1.97.1.12 GO:0000287 ... P0A405 N/A
    555425 6trd:A (3.16) BS02 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555426 6trd:A (3.16) BS03 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555427 6trd:A (3.16) BS04 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555428 6trd:A (3.16) BS05 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555429 6trd:A (3.16) BS06 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555430 6trd:A (3.16) BS07 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555431 6trd:A (3.16) BS08 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555432 6trd:A (3.16) BS09 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555433 6trd:A (3.16) BS10 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555434 6trd:A (3.16) BS11 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555435 6trd:A (3.16) BS12 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555436 6trd:A (3.16) BS13 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555437 6trd:A (3.16) BS14 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555438 6trd:A (3.16) BS15 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555439 6trd:A (3.16) BS16 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555440 6trd:A (3.16) BS17 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555441 6trd:A (3.16) BS18 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555442 6trd:A (3.16) BS19 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555443 6trd:A (3.16) BS20 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555444 6trd:A (3.16) BS21 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555445 6trd:A (3.16) BS22 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555446 6trd:A (3.16) BS23 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555447 6trd:A (3.16) BS24 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555448 6trd:A (3.16) BS25 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555449 6trd:A (3.16) BS26 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555450 6trd:A (3.16) BS27 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555451 6trd:A (3.16) BS28 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555452 6trd:A (3.16) BS29 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555453 6trd:A (3.16) BS30 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555454 6trd:A (3.16) BS31 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555455 6trd:A (3.16) BS32 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555456 6trd:A (3.16) BS33 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555457 6trd:A (3.16) BS34 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555458 6trd:A (3.16) BS35 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555459 6trd:A (3.16) BS36 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555460 6trd:A (3.16) BS37 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555461 6trd:A (3.16) BS38 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555462 6trd:A (3.16) BS39 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555463 6trd:A (3.16) BS40 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555464 6trd:A (3.16) BS41 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555465 6trd:A (3.16) BS42 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555466 6trd:A (3.16) BS43 PQN 1.97.1.12 GO:0000287 ... P0A405 N/A
    555467 6trd:A (3.16) BS44 SF4 1.97.1.12 GO:0000287 ... P0A405 N/A
    555468 6trd:A (3.16) BS45 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555469 6trd:A (3.16) BS46 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555470 6trd:A (3.16) BS47 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555471 6trd:A (3.16) BS48 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555472 6trd:A (3.16) BS49 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555473 6trd:B (3.16) BS01 peptide 1.97.1.12 GO:0000287 ... P0A407 N/A
    555474 6trd:B (3.16) BS02 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555475 6trd:B (3.16) BS03 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555476 6trd:B (3.16) BS04 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555477 6trd:B (3.16) BS05 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555478 6trd:B (3.16) BS06 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555479 6trd:B (3.16) BS07 SF4 1.97.1.12 GO:0000287 ... P0A407 N/A
    555480 6trd:B (3.16) BS08 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555481 6trd:B (3.16) BS09 CA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555482 6trd:B (3.16) BS10 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555483 6trd:B (3.16) BS11 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555484 6trd:B (3.16) BS12 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555485 6trd:B (3.16) BS13 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555486 6trd:B (3.16) BS14 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555487 6trd:B (3.16) BS15 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555488 6trd:B (3.16) BS16 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555489 6trd:B (3.16) BS17 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555490 6trd:B (3.16) BS18 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555491 6trd:B (3.16) BS19 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555492 6trd:B (3.16) BS20 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555493 6trd:B (3.16) BS21 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555494 6trd:B (3.16) BS22 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555495 6trd:B (3.16) BS23 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555496 6trd:B (3.16) BS24 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555497 6trd:B (3.16) BS25 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555498 6trd:B (3.16) BS26 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555499 6trd:B (3.16) BS27 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555500 6trd:B (3.16) BS28 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555501 6trd:B (3.16) BS29 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555502 6trd:B (3.16) BS30 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555503 6trd:B (3.16) BS31 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555504 6trd:B (3.16) BS32 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555505 6trd:B (3.16) BS33 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555506 6trd:B (3.16) BS34 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555507 6trd:B (3.16) BS35 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555508 6trd:B (3.16) BS36 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555509 6trd:B (3.16) BS37 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555510 6trd:B (3.16) BS38 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555511 6trd:B (3.16) BS39 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555512 6trd:B (3.16) BS40 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555513 6trd:B (3.16) BS41 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555514 6trd:B (3.16) BS42 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555515 6trd:B (3.16) BS43 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555516 6trd:B (3.16) BS44 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555517 6trd:B (3.16) BS45 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555518 6trd:B (3.16) BS46 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555519 6trd:B (3.16) BS47 PQN 1.97.1.12 GO:0000287 ... P0A407 N/A
    555520 6trd:C (3.16) BS01 SF4 1.97.1.12 GO:0009055 ... P0A415 N/A
    555521 6trd:C (3.16) BS02 SF4 1.97.1.12 GO:0009055 ... P0A415 N/A
    555522 6trd:F (3.16) BS01 peptide ? GO:0009522 ... P0A401 N/A
    555523 6trd:F (3.16) BS02 CLA ? GO:0009522 ... P0A401 N/A
    555524 6trd:F (3.16) BS03 CLA ? GO:0009522 ... P0A401 N/A
    555525 6trd:F (3.16) BS04 CLA ? GO:0009522 ... P0A401 N/A
    555526 6trd:F (3.16) BS05 CLA ? GO:0009522 ... P0A401 N/A
    555527 6trd:F (3.16) BS06 CLA ? GO:0009522 ... P0A401 N/A
    555528 6trd:F (3.16) BS07 CLA ? GO:0009522 ... P0A401 N/A
    555529 6trd:I (3.16) BS01 CLA ? GO:0009522 ... P0A427 N/A
    555530 6trd:I (3.16) BS02 CLA ? GO:0009522 ... P0A427 N/A
    555531 6trd:I (3.16) BS03 CLA ? GO:0009522 ... P0A427 N/A
    555532 6trd:J (3.16) BS01 CLA ? GO:0009522 ... P0A429 N/A
    555533 6trd:J (3.16) BS02 CLA ? GO:0009522 ... P0A429 N/A
    555534 6trd:J (3.16) BS03 CLA ? GO:0009522 ... P0A429 N/A
    555535 6trd:J (3.16) BS04 CLA ? GO:0009522 ... P0A429 N/A
    555536 6trd:J (3.16) BS05 CLA ? GO:0009522 ... P0A429 N/A
    555537 6trd:K (3.16) BS01 CLA ? GO:0009522 ... P0A425 N/A
    555538 6trd:K (3.16) BS02 CLA ? GO:0009522 ... P0A425 N/A
    555539 6trd:L (3.16) BS01 CLA ? GO:0009522 ... Q8DGB4 N/A
    555540 6trd:L (3.16) BS02 CLA ? GO:0009522 ... Q8DGB4 N/A
    555541 6trd:L (3.16) BS03 CLA ? GO:0009522 ... Q8DGB4 N/A
    555542 6trd:L (3.16) BS04 CA ? GO:0009522 ... Q8DGB4 N/A
    555543 6trd:L (3.16) BS05 CLA ? GO:0009522 ... Q8DGB4 N/A
    555544 6trd:L (3.16) BS06 CLA ? GO:0009522 ... Q8DGB4 N/A
    555545 6trd:L (3.16) BS07 CLA ? GO:0009522 ... Q8DGB4 N/A
    555546 6trd:L (3.16) BS08 CLA ? GO:0009522 ... Q8DGB4 N/A
    555547 6trd:a (3.16) BS01 CL0 1.97.1.12 GO:0000287 ... P0A405 N/A
    555548 6trd:a (3.16) BS02 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555549 6trd:a (3.16) BS03 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555550 6trd:a (3.16) BS04 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555551 6trd:a (3.16) BS05 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555552 6trd:a (3.16) BS06 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555553 6trd:a (3.16) BS07 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555554 6trd:a (3.16) BS08 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555555 6trd:a (3.16) BS09 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555556 6trd:a (3.16) BS10 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555557 6trd:a (3.16) BS11 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555558 6trd:a (3.16) BS12 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555559 6trd:a (3.16) BS13 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555560 6trd:a (3.16) BS14 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555561 6trd:a (3.16) BS15 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555562 6trd:a (3.16) BS16 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555563 6trd:a (3.16) BS17 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555564 6trd:a (3.16) BS18 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555565 6trd:a (3.16) BS19 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555566 6trd:a (3.16) BS20 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555567 6trd:a (3.16) BS21 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555568 6trd:a (3.16) BS22 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555569 6trd:a (3.16) BS23 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555570 6trd:a (3.16) BS24 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555571 6trd:a (3.16) BS25 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555572 6trd:a (3.16) BS26 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555573 6trd:a (3.16) BS27 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555574 6trd:a (3.16) BS28 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555575 6trd:a (3.16) BS29 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555576 6trd:a (3.16) BS30 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555577 6trd:a (3.16) BS31 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555578 6trd:a (3.16) BS32 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555579 6trd:a (3.16) BS33 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555580 6trd:a (3.16) BS34 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555581 6trd:a (3.16) BS35 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555582 6trd:a (3.16) BS36 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555583 6trd:a (3.16) BS37 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555584 6trd:a (3.16) BS38 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555585 6trd:a (3.16) BS39 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555586 6trd:a (3.16) BS40 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555587 6trd:a (3.16) BS41 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555588 6trd:a (3.16) BS42 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555589 6trd:a (3.16) BS43 PQN 1.97.1.12 GO:0000287 ... P0A405 N/A
    555590 6trd:a (3.16) BS44 SF4 1.97.1.12 GO:0000287 ... P0A405 N/A
    555591 6trd:a (3.16) BS45 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555592 6trd:a (3.16) BS46 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555593 6trd:a (3.16) BS47 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555594 6trd:a (3.16) BS48 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555595 6trd:a (3.16) BS49 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    555596 6trd:b (3.16) BS01 peptide 1.97.1.12 GO:0000287 ... P0A407 N/A
    555597 6trd:b (3.16) BS02 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555598 6trd:b (3.16) BS03 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555599 6trd:b (3.16) BS04 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    555600 6trd:b (3.16) BS05 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).