SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    559601 6ueg:A (2.0) BS02 Q5G 2.3.1.129 GO:0005737 ... A6V1E4 31664082 MOAD: Kd=19.5uM
    559602 6ueg:B (2.0) BS01 Q5G 2.3.1.129 GO:0005737 ... A6V1E4 31664082
    559603 6ueg:B (2.0) BS02 Q5G 2.3.1.129 GO:0005737 ... A6V1E4 31664082
    559604 6ueg:C (2.0) BS01 Q5G 2.3.1.129 GO:0005737 ... A6V1E4 31664082 MOAD: Kd=19.5uM
    559605 6ueg:C (2.0) BS02 Q5G 2.3.1.129 GO:0005737 ... A6V1E4 31664082 MOAD: Kd=19.5uM
    559606 6ueg:D (2.0) BS01 Q5G 2.3.1.129 GO:0005737 ... A6V1E4 31664082 MOAD: Kd=19.5uM
    559607 6ueg:D (2.0) BS02 Q5G 2.3.1.129 GO:0005737 ... A6V1E4 31664082 MOAD: Kd=19.5uM
    559608 6ueg:E (2.0) BS01 Q5G 2.3.1.129 GO:0005737 ... A6V1E4 31664082 MOAD: Kd=19.5uM
    559609 6ueg:E (2.0) BS02 Q5G 2.3.1.129 GO:0005737 ... A6V1E4 31664082 MOAD: Kd=19.5uM
    559610 6ueg:F (2.0) BS01 Q5G 2.3.1.129 GO:0005737 ... A6V1E4 31664082 MOAD: Kd=19.5uM
    559611 6ueg:F (2.0) BS02 Q5G 2.3.1.129 GO:0005737 ... A6V1E4 31664082 MOAD: Kd=19.5uM
    559612 6ueh:A (1.849) BS01 CA N/A GO:0004553 ... N/A 32139511
    559613 6uei:A (2.51) BS01 ZN ? GO:0046872 ... Q7Z2W4 31719195
    559614 6uei:A (2.51) BS02 ZN ? GO:0046872 ... Q7Z2W4 31719195
    559615 6uei:A (2.51) BS03 ZN ? GO:0046872 ... Q7Z2W4 31719195
    559616 6uei:A (2.51) BS04 ZN ? GO:0046872 ... Q7Z2W4 31719195
    559617 6uej:A (2.21) BS01 rna ? GO:0046872 ... Q7Z2W4 31719195
    559618 6uej:A (2.21) BS02 ZN ? GO:0046872 ... Q7Z2W4 31719195
    559619 6uej:A (2.21) BS03 ZN ? GO:0046872 ... Q7Z2W4 31719195
    559620 6uej:A (2.21) BS04 ZN ? GO:0046872 ... Q7Z2W4 31719195
    559621 6uej:A (2.21) BS05 ZN ? GO:0046872 ... Q7Z2W4 31719195
    559622 6uek:A (2.16) BS01 NAD 4.2.1.49 GO:0000166 ... Q4D9S6 31843618
    559623 6uek:B (2.16) BS01 NAD 4.2.1.49 GO:0000166 ... Q4D9S6 31843618
    559624 6uek:C (2.16) BS01 NAD 4.2.1.49 GO:0000166 ... Q4D9S6 31843618
    559625 6uek:D (2.16) BS01 NAD 4.2.1.49 GO:0000166 ... Q4D9S6 31843618
    559626 6uel:A (1.9) BS01 ZN 6.3.4.16 GO:0000050 ... P31327 32017919
    559627 6uel:A (1.9) BS02 Q5A 6.3.4.16 GO:0000050 ... P31327 32017919
    559628 6uel:B (1.9) BS01 ZN 6.3.4.16 GO:0000050 ... P31327 32017919
    559629 6uel:B (1.9) BS02 Q5A 6.3.4.16 GO:0000050 ... P31327 32017919
    559630 6ueo:A (2.0) BS01 dna ? GO:0003677 ... P28147 33087930
    559631 6ueo:A (2.0) BS02 dna ? GO:0003677 ... P28147 33087930
    559632 6ueo:D (2.0) BS01 dna ? GO:0003677 ... P28147 33087930
    559633 6ueo:D (2.0) BS02 dna ? GO:0003677 ... P28147 33087930
    559634 6ueo:D (2.0) BS03 dna ? GO:0003677 ... P28147 33087930
    559635 6ueo:G (2.0) BS01 dna ? GO:0003677 ... P28147 33087930
    559636 6ueo:G (2.0) BS02 dna ? GO:0003677 ... P28147 33087930
    559637 6ueo:G (2.0) BS03 dna ? GO:0003677 ... P28147 33087930
    559638 6ueo:J (2.0) BS01 dna ? GO:0003677 ... P28147 33087930
    559639 6ueo:J (2.0) BS02 dna ? GO:0003677 ... P28147 33087930
    559640 6uep:A (2.05) BS01 dna ? GO:0003677 ... P28147 33087930
    559641 6uep:A (2.05) BS02 dna ? GO:0003677 ... P28147 33087930
    559642 6uep:B (2.05) BS01 dna ? GO:0003677 ... P28147 33087930
    559643 6uep:B (2.05) BS02 dna ? GO:0003677 ... P28147 33087930
    559644 6ueq:B (2.4) BS01 dna ? GO:0003677 ... P28147 33087930
    559645 6ueq:B (2.4) BS02 dna ? GO:0003677 ... P28147 33087930
    559646 6uer:A (2.5) BS01 dna ? GO:0003677 ... P28147 33087930
    559647 6uer:A (2.5) BS02 dna ? GO:0003677 ... P28147 33087930
    559648 6uer:B (2.5) BS01 dna ? GO:0003677 ... P28147 33087930
    559649 6uer:B (2.5) BS02 dna ? GO:0003677 ... P28147 33087930
    559650 6ueu:A (1.8) BS01 dna 2.7.7.7 GO:0000166 ... D9N168 N/A
    559651 6ueu:A (1.8) BS02 dna 2.7.7.7 GO:0000166 ... D9N168 N/A
    559652 6ueu:A (1.8) BS03 GLC 2.7.7.7 GO:0000166 ... D9N168 N/A
    559653 6ueu:A (1.8) BS04 FRU 2.7.7.7 GO:0000166 ... D9N168 N/A
    559654 6ueu:A (1.8) BS05 DTP 2.7.7.7 GO:0000166 ... D9N168 N/A
    559655 6ueu:D (1.8) BS01 dna 2.7.7.7 GO:0000166 ... D9N168 N/A
    559656 6ueu:D (1.8) BS02 dna 2.7.7.7 GO:0000166 ... D9N168 N/A
    559657 6ueu:D (1.8) BS03 GLC 2.7.7.7 GO:0000166 ... D9N168 N/A
    559658 6ueu:D (1.8) BS04 FRU 2.7.7.7 GO:0000166 ... D9N168 N/A
    559659 6ueu:D (1.8) BS05 DTP 2.7.7.7 GO:0000166 ... D9N168 N/A
    559660 6uex:A (1.9) BS01 Q5S ? N/A Q99Q02 31969390
    559661 6uez:A (1.98) BS01 HEM 1.14.14.154 GO:0004497 ... Q16850 32493730
    559662 6uez:A (1.98) BS02 LAN 1.14.14.154 GO:0004497 ... Q16850 32493730
    559663 6uez:B (1.98) BS01 HEM 1.14.14.154 GO:0004497 ... Q16850 32493730
    559664 6uez:B (1.98) BS02 LAN 1.14.14.154 GO:0004497 ... Q16850 32493730
    559665 6uf0:A (1.96) BS01 Q5V ? N/A Q14145 31682434 MOAD: ic50=73nM
    559666 6uf0:B (1.96) BS01 Q5Y ? N/A Q14145 31682434 MOAD: ic50=230nM
    BindingDB: IC50=110nM
    559667 6ufb:A (1.67) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32031797
    559668 6ufb:A (1.67) BS02 Q64 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32031797 MOAD: Ki=4.4nM
    559669 6ufc:A (1.325) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32031797
    559670 6ufc:A (1.325) BS02 Q6A 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32031797 MOAD: Ki=0.45nM
    559671 6ufd:A (1.48) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32031797
    559672 6ufd:A (1.48) BS02 Q6D 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32031797 MOAD: Ki=2.9nM
    559673 6uff:A (2.007) BS01 FMN ? GO:0000166 ... Q8YVV8 32181943
    559674 6uff:A (2.007) BS02 CA ? GO:0000166 ... Q8YVV8 32181943
    559675 6uff:B (2.007) BS01 FMN ? GO:0000166 ... Q8YVV8 32181943
    559676 6uff:B (2.007) BS02 CA ? GO:0000166 ... Q8YVV8 32181943
    559677 6uff:C (2.007) BS01 FMN ? GO:0000166 ... Q8YVV8 32181943
    559678 6uff:C (2.007) BS02 CA ? GO:0000166 ... Q8YVV8 32181943
    559679 6uff:D (2.007) BS01 FMN ? GO:0000166 ... Q8YVV8 32181943
    559680 6uff:D (2.007) BS02 CA ? GO:0000166 ... Q8YVV8 32181943
    559681 6uff:E (2.007) BS01 FMN ? GO:0000166 ... Q8YVV8 32181943
    559682 6uff:E (2.007) BS02 CA ? GO:0000166 ... Q8YVV8 32181943
    559683 6uff:F (2.007) BS01 FMN ? GO:0000166 ... Q8YVV8 32181943
    559684 6uff:F (2.007) BS02 CA ? GO:0000166 ... Q8YVV8 32181943
    559685 6uff:G (2.007) BS01 FMN ? GO:0000166 ... Q8YVV8 32181943
    559686 6uff:G (2.007) BS02 CA ? GO:0000166 ... Q8YVV8 32181943
    559687 6uff:H (2.007) BS01 FMN ? GO:0000166 ... Q8YVV8 32181943
    559688 6uff:H (2.007) BS02 CA ? GO:0000166 ... Q8YVV8 32181943
    559689 6ufi:A (1.72) BS01 MN 4.1.1.2 GO:0005737 ... O34714 34097877
    559690 6ufi:A (1.72) BS02 MN 4.1.1.2 GO:0005737 ... O34714 34097877
    559691 6ufl:A (1.61) BS01 BGC N/A N/A N/A 32451508
    559692 6ufl:A (1.61) BS02 BGC N/A N/A N/A 32451508
    559693 6ufl:A (1.61) BS03 BGC N/A N/A N/A 32451508
    559694 6ufl:A (1.61) BS04 BGC N/A N/A N/A 32451508
    559695 6ufn:A (2.7) BS01 Q6M 3.5.1.48
    3.5.1.62
    GO:0005634 ... F1QCV2 31746596
    559696 6ufn:A (2.7) BS02 ZN 3.5.1.48
    3.5.1.62
    GO:0005634 ... F1QCV2 31746596
    559697 6ufo:A (2.68) BS01 Q6P 3.5.1.48
    3.5.1.62
    GO:0005634 ... F1QCV2 31746596
    559698 6ufo:A (2.68) BS02 ZN 3.5.1.48
    3.5.1.62
    GO:0005634 ... F1QCV2 31746596
    559699 6ufp:A (1.737) BS01 FDA 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 32159324
    559700 6ufp:A (1.737) BS02 T2C 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 32159324
    559701 6ufp:A (1.737) BS03 NAD 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 32159324
    559702 6ufp:B (1.737) BS01 FDA 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 32159324
    559703 6ufp:B (1.737) BS02 T2C 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 32159324
    559704 6ufp:B (1.737) BS03 NAD 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 32159324
    559705 6ufq:A (2.51) BS01 MG ? GO:0046872 ... A0A161XU12 31615898
    559706 6ufq:A (2.51) BS02 GLY ? GO:0046872 ... A0A161XU12 31615898
    559707 6ufq:A (2.51) BS03 GLY ? GO:0046872 ... A0A161XU12 31615898
    559708 6ufq:B (2.51) BS01 GLY ? GO:0046872 ... A0A161XU12 31615898
    559709 6ufq:B (2.51) BS02 MG ? GO:0046872 ... A0A161XU12 31615898
    559710 6ufq:B (2.51) BS03 GLY ? GO:0046872 ... A0A161XU12 31615898
    559711 6ufq:C (2.51) BS01 MG ? GO:0046872 ... A0A161XU12 31615898
    559712 6ufq:C (2.51) BS02 GLY ? GO:0046872 ... A0A161XU12 31615898
    559713 6ufq:C (2.51) BS03 GLY ? GO:0046872 ... A0A161XU12 31615898
    559714 6ufq:D (2.51) BS01 GLY ? GO:0046872 ... A0A161XU12 31615898
    559715 6ufq:D (2.51) BS02 MG ? GO:0046872 ... A0A161XU12 31615898
    559716 6ufq:D (2.51) BS03 GLY ? GO:0046872 ... A0A161XU12 31615898
    559717 6ufs:B (1.47) BS01 Q6J 5.3.3.1 GO:0004769 ... P07445 32378409
    559718 6ufx:A (2.015) BS01 Q6S ? GO:0000122 ... P61964 31858797 MOAD: Ki=0.049nM
    BindingDB: Kd=0.049000nM
    559719 6ug0:A (1.83) BS01 ICE 1.18.6.1 GO:0005524 ... P07328 32554596
    559720 6ug0:A (1.83) BS02 HDZ 1.18.6.1 GO:0005524 ... P07328 32554596
    559721 6ug0:A (1.83) BS03 MO 1.18.6.1 GO:0005524 ... P07328 32554596
    559722 6ug0:A (1.83) BS04 MO 1.18.6.1 GO:0005524 ... P07328 32554596
    559723 6ug0:A (1.83) BS05 1CL 1.18.6.1 GO:0005524 ... P07328 32554596
    559724 6ug0:B (1.83) BS01 1CL 1.18.6.1 GO:0005524 ... P07329 32554596
    559725 6ug0:B (1.83) BS02 MO 1.18.6.1 GO:0005524 ... P07329 32554596
    559726 6ug0:B (1.83) BS03 FE 1.18.6.1 GO:0005524 ... P07329 32554596
    559727 6ug0:B (1.83) BS04 FE 1.18.6.1 GO:0005524 ... P07329 32554596
    559728 6ug0:C (1.83) BS01 ICZ 1.18.6.1 GO:0005524 ... P07328 32554596
    559729 6ug0:C (1.83) BS02 HDZ 1.18.6.1 GO:0005524 ... P07328 32554596
    559730 6ug0:C (1.83) BS03 MO 1.18.6.1 GO:0005524 ... P07328 32554596
    559731 6ug0:C (1.83) BS04 MO 1.18.6.1 GO:0005524 ... P07328 32554596
    559732 6ug0:C (1.83) BS05 HDZ 1.18.6.1 GO:0005524 ... P07328 32554596
    559733 6ug0:C (1.83) BS06 1CL 1.18.6.1 GO:0005524 ... P07328 32554596
    559734 6ug0:D (1.83) BS01 FE 1.18.6.1 GO:0005524 ... P07329 32554596
    559735 6ug0:D (1.83) BS02 FE 1.18.6.1 GO:0005524 ... P07329 32554596
    559736 6ug0:D (1.83) BS03 1CL 1.18.6.1 GO:0005524 ... P07329 32554596
    559737 6ug0:D (1.83) BS04 MO 1.18.6.1 GO:0005524 ... P07329 32554596
    559738 6ug1:A (2.833) BS01 dna ? GO:0003677 ... P14736 34428697
    559739 6ug1:A (2.833) BS02 dna ? GO:0003677 ... P14736 34428697
    559740 6ug4:A (2.295) BS01 CFF ? GO:0006816 ... Q8A5J2 N/A
    559741 6ug4:B (2.295) BS01 CFF ? GO:0006816 ... Q8A5J2 N/A
    559742 6ug4:C (2.295) BS01 CFF ? GO:0006816 ... Q8A5J2 N/A
    559743 6ug4:D (2.295) BS01 CFF ? GO:0006816 ... Q8A5J2 N/A
    559744 6ug4:D (2.295) BS02 CFF ? GO:0006816 ... Q8A5J2 N/A
    559745 6ug4:D (2.295) BS03 CFF ? GO:0006816 ... Q8A5J2 N/A
    559746 6ug4:D (2.295) BS04 PYR ? GO:0006816 ... Q8A5J2 N/A
    559747 6ug4:D (2.295) BS05 PYR ? GO:0006816 ... Q8A5J2 N/A
    559748 6ug4:E (2.295) BS01 CFF ? GO:0006816 ... Q8A5J2 N/A
    559749 6ug4:F (2.295) BS01 CFF ? GO:0006816 ... Q8A5J2 N/A
    559750 6ug7:H (1.52) BS01 GLA N/A N/A N/A 31831622
    559751 6ug7:H (1.52) BS02 GAL N/A N/A N/A 31831622
    559752 6ug7:H (1.52) BS03 SIA N/A N/A N/A 31831622
    559753 6ug7:L (1.52) BS01 GLA N/A N/A N/A 31831622
    559754 6ug8:H (1.89) BS01 GLA N/A N/A N/A 31831622
    559755 6ug8:H (1.89) BS02 GAL N/A N/A N/A 31831622
    559756 6ug8:H (1.89) BS03 SIA N/A N/A N/A 31831622
    559757 6ug8:L (1.89) BS01 GLA N/A N/A N/A 31831622
    559758 6ug9:A (2.74) BS01 SIA N/A N/A N/A 31831622
    559759 6ug9:B (2.74) BS01 GAL N/A N/A N/A 31831622
    559760 6ug9:B (2.74) BS02 GLA N/A N/A N/A 31831622
    559761 6ug9:H (2.74) BS01 SIA N/A N/A N/A 31831622
    559762 6ug9:J (2.74) BS01 SIA N/A N/A N/A 31831622
    559763 6ug9:K (2.74) BS01 GAL N/A N/A N/A 31831622
    559764 6ug9:K (2.74) BS02 GLA N/A N/A N/A 31831622
    559765 6ug9:L (2.74) BS01 GAL N/A N/A N/A 31831622
    559766 6ug9:L (2.74) BS02 GLA N/A N/A N/A 31831622
    559767 6ugd:A (3.5) BS01 peptide 5.6.1.1 GO:0000212 ... P34808 31735665
    559768 6ugd:A (3.5) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559769 6ugd:B (3.5) BS01 peptide 5.6.1.1 GO:0000212 ... P34808 31735665
    559770 6ugd:B (3.5) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559771 6ugd:B (3.5) BS03 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559772 6ugd:C (3.5) BS01 peptide 5.6.1.1 GO:0000212 ... P34808 31735665
    559773 6ugd:C (3.5) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559774 6ugd:D (3.5) BS01 peptide 5.6.1.1 GO:0000212 ... P34808 31735665
    559775 6ugd:D (3.5) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559776 6ugd:E (3.5) BS01 peptide 5.6.1.1 GO:0000212 ... P34808 31735665
    559777 6ugd:E (3.5) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559778 6ugd:E (3.5) BS03 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559779 6ugd:F (3.5) BS01 peptide 5.6.1.1 GO:0000212 ... P34808 31735665
    559780 6ugd:F (3.5) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559781 6ugd:F (3.5) BS03 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559782 6uge:B (3.6) BS01 peptide 5.6.1.1 GO:0000212 ... P34808 31735665
    559783 6uge:B (3.6) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559784 6uge:C (3.6) BS01 peptide 5.6.1.1 GO:0000212 ... P34808 31735665
    559785 6uge:C (3.6) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559786 6uge:D (3.6) BS01 peptide 5.6.1.1 GO:0000212 ... P34808 31735665
    559787 6uge:D (3.6) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559788 6uge:D (3.6) BS03 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559789 6uge:E (3.6) BS01 peptide 5.6.1.1 GO:0000212 ... P34808 31735665
    559790 6uge:E (3.6) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559791 6uge:F (3.6) BS01 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559792 6uge:F (3.6) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559793 6ugf:B (4.2) BS01 peptide 5.6.1.1 GO:0000212 ... P34808 31735665
    559794 6ugf:B (4.2) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559795 6ugf:C (4.2) BS01 peptide 5.6.1.1 GO:0000212 ... P34808 31735665
    559796 6ugf:C (4.2) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559797 6ugf:D (4.2) BS01 peptide 5.6.1.1 GO:0000212 ... P34808 31735665
    559798 6ugf:D (4.2) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665
    559799 6ugf:E (4.2) BS01 peptide 5.6.1.1 GO:0000212 ... P34808 31735665
    559800 6ugf:E (4.2) BS02 ATP 5.6.1.1 GO:0000212 ... P34808 31735665

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).