SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    560801 6uqc:D (1.87) BS01 BMA ? N/A P01865 31856660
    560802 6uqc:F (1.87) BS01 BMA ? N/A P01865 31856660
    560803 6uqc:F (1.87) BS02 FUC ? N/A P01865 31856660
    560804 6uqd:A (2.02) BS01 QF4 3.4.22.10 GO:0004197 ... P0C0J0 32479075 MOAD: ic50=29nM
    560805 6uqd:B (2.02) BS01 QF4 3.4.22.10 GO:0004197 ... P0C0J0 32479075 MOAD: ic50=29nM
    560806 6uqe:A (3.0) BS01 peptide ? GO:0005524 ... P0ABH9 32313240
    560807 6uqe:A (3.0) BS02 peptide ? GO:0005524 ... P0ABH9 32313240
    560808 6uqe:A (3.0) BS03 ADP ? GO:0005524 ... P0ABH9 32313240
    560809 6uqe:A (3.0) BS04 ADP ? GO:0005524 ... P0ABH9 32313240
    560810 6uqe:B (3.0) BS01 peptide ? GO:0005524 ... P0ABH9 32313240
    560811 6uqe:B (3.0) BS02 AGS ? GO:0005524 ... P0ABH9 32313240
    560812 6uqe:B (3.0) BS03 AGS ? GO:0005524 ... P0ABH9 32313240
    560813 6uqe:B (3.0) BS04 AGS ? GO:0005524 ... P0ABH9 32313240
    560814 6uqe:C (3.0) BS01 peptide ? GO:0005524 ... P0ABH9 32313240
    560815 6uqe:C (3.0) BS02 peptide ? GO:0005524 ... P0ABH9 32313240
    560816 6uqe:C (3.0) BS03 AGS ? GO:0005524 ... P0ABH9 32313240
    560817 6uqe:C (3.0) BS04 AGS ? GO:0005524 ... P0ABH9 32313240
    560818 6uqe:C (3.0) BS05 AGS ? GO:0005524 ... P0ABH9 32313240
    560819 6uqe:D (3.0) BS01 peptide ? GO:0005524 ... P0ABH9 32313240
    560820 6uqe:D (3.0) BS02 peptide ? GO:0005524 ... P0ABH9 32313240
    560821 6uqe:D (3.0) BS03 AGS ? GO:0005524 ... P0ABH9 32313240
    560822 6uqe:D (3.0) BS04 AGS ? GO:0005524 ... P0ABH9 32313240
    560823 6uqe:E (3.0) BS01 ADP ? GO:0005524 ... P0ABH9 32313240
    560824 6uqe:E (3.0) BS02 ADP ? GO:0005524 ... P0ABH9 32313240
    560825 6uqe:E (3.0) BS03 AGS ? GO:0005524 ... P0ABH9 32313240
    560826 6uqe:F (3.0) BS01 ADP ? GO:0005524 ... P0ABH9 32313240
    560827 6uqe:F (3.0) BS02 ADP ? GO:0005524 ... P0ABH9 32313240
    560828 6uqf:A (3.04) BS01 CMP ? GO:0005216 ... O60741 31787376
    560829 6uqf:B (3.04) BS01 CMP ? GO:0005216 ... O60741 31787376
    560830 6uqf:C (3.04) BS01 CMP ? GO:0005216 ... O60741 31787376
    560831 6uqf:D (3.04) BS01 CMP ? GO:0005216 ... O60741 31787376
    560832 6uqg:A (3.54) BS01 CMP ? GO:0005216 ... O60741 31787376
    560833 6uqg:B (3.54) BS01 CMP ? GO:0005216 ... O60741 31787376
    560834 6uqg:C (3.54) BS01 CMP ? GO:0005216 ... O60741 31787376
    560835 6uqg:D (3.54) BS01 CMP ? GO:0005216 ... O60741 31787376
    560836 6uqi:A (2.5) BS01 dna 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    560837 6uqi:A (2.5) BS02 dna 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    560838 6uqi:A (2.5) BS03 XG4 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    560839 6uqi:A (2.5) BS04 MN 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    560840 6uqi:A (2.5) BS05 MN 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    560841 6uqk:A (3.77) BS01 ZN ? GO:0000822 ... Q14573 31915246
    560842 6uqk:B (3.77) BS01 ZN ? GO:0000822 ... Q14573 31915246
    560843 6uqk:C (3.77) BS01 ZN ? GO:0000822 ... Q14573 31915246
    560844 6uqk:D (3.77) BS01 ZN ? GO:0000822 ... Q14573 31915246
    560845 6uql:A (2.1) BS01 SF4 4.2.1.2 GO:0004333 ... E9AE57 31743022
    560846 6uql:B (2.1) BS01 SF4 4.2.1.2 GO:0004333 ... E9AE57 31743022
    560847 6uqm:A (2.004) BS01 SF4 4.2.1.2 GO:0004333 ... E9AE57 31743022
    560848 6uqm:B (2.004) BS01 SF4 4.2.1.2 GO:0004333 ... E9AE57 31743022
    560849 6uqn:A (3.298) BS01 SF4 4.2.1.2 GO:0004333 ... E9AE57 31743022
    560850 6uqn:B (3.298) BS01 SF4 4.2.1.2 GO:0004333 ... E9AE57 31743022
    560851 6uqn:B (3.298) BS02 FUM 4.2.1.2 GO:0004333 ... E9AE57 31743022
    560852 6uqo:A (3.1) BS01 peptide 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560853 6uqo:A (3.1) BS02 ADP 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560854 6uqo:A (3.1) BS03 ADP 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560855 6uqo:A (3.1) BS04 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560856 6uqo:B (3.1) BS01 peptide 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560857 6uqo:B (3.1) BS02 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560858 6uqo:B (3.1) BS03 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560859 6uqo:B (3.1) BS04 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560860 6uqo:C (3.1) BS01 peptide 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560861 6uqo:C (3.1) BS02 peptide 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560862 6uqo:C (3.1) BS03 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560863 6uqo:C (3.1) BS04 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560864 6uqo:C (3.1) BS05 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560865 6uqo:D (3.1) BS01 peptide 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560866 6uqo:D (3.1) BS02 peptide 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560867 6uqo:D (3.1) BS03 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560868 6uqo:D (3.1) BS04 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560869 6uqo:E (3.1) BS01 ADP 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560870 6uqo:E (3.1) BS02 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560871 6uqo:F (3.1) BS01 ADP 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560872 6uqo:F (3.1) BS02 ADP 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    560873 6uqq:A (2.75) BS01 GDP ? GO:0005525 ... Q16181 32910969
    560874 6uqq:B (2.75) BS01 GDP ? GO:0005525 ... Q16181 32910969
    560875 6uqq:C (2.75) BS01 GDP ? GO:0005525 ... Q9UH03 32910969
    560876 6uqq:D (2.75) BS01 GDP ? GO:0005525 ... Q9UH03 32910969
    560877 6uqs:A (1.37) BS01 QFP 3.5.2.6 GO:0008800 ... P24735 31759850
    560878 6uqt:A (1.25) BS01 QFS 3.5.2.6 GO:0008800 ... P24735 31759850
    560879 6uqu:A (1.0902) BS01 PBC 3.5.2.6 GO:0008800 ... P24735 31759850
    560880 6uqw:A (1.65) BS01 ACT 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560881 6uqw:A (1.65) BS02 ETM 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560882 6uqw:A (1.65) BS03 ETM 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560883 6uqw:B (1.65) BS01 ACT 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560884 6uqw:B (1.65) BS02 ETM 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560885 6uqx:A (1.85) BS01 QFJ 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560886 6uqx:B (1.85) BS01 ETM 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560887 6uqy:A (1.57) BS01 AT3 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560888 6uqy:B (1.57) BS01 AT3 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560889 6uqz:A (1.43) BS01 ACT 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560890 6uqz:A (1.43) BS02 ETM 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560891 6uqz:B (1.43) BS01 ACT 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560892 6uqz:B (1.43) BS02 ETM 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560893 6ur0:A (1.8) BS01 ETM 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560894 6ur0:B (1.8) BS01 ETM 3.1.-.- GO:0004104 ... Q9HUP2 32371400
    560895 6ur1:A (1.42) BS01 ACT ? GO:0004104 ... Q9HUP2 32371400
    560896 6ur1:A (1.42) BS02 AT3 ? GO:0004104 ... Q9HUP2 32371400
    560897 6ur1:B (1.42) BS01 ACT ? GO:0004104 ... Q9HUP2 32371400
    560898 6ur1:B (1.42) BS02 AT3 ? GO:0004104 ... Q9HUP2 32371400
    560899 6ur2:A (2.27) BS01 dna 2.7.7.7 GO:0000166 ... D9N168 32188786
    560900 6ur2:A (2.27) BS02 dna 2.7.7.7 GO:0000166 ... D9N168 32188786
    560901 6ur3:A (1.423) BS01 QFP 3.5.2.6 GO:0008800 ... P24735 31759850
    560902 6ur3:A (1.423) BS02 EDO 3.5.2.6 GO:0008800 ... P24735 31759850
    560903 6ur3:A (1.423) BS03 EDO 3.5.2.6 GO:0008800 ... P24735 31759850
    560904 6ur4:A (2.25) BS01 dna 2.7.7.7 GO:0000166 ... D9N168 32188786
    560905 6ur4:A (2.25) BS02 dna 2.7.7.7 GO:0000166 ... D9N168 32188786
    560906 6ur8:A (3.71) BS01 QMR ? GO:0004888 ... P0ABE7
    P43681
    32221310
    560907 6ur8:B (3.71) BS01 QMR ? GO:0004888 ... P17787 32221310 BindingDB: Ki=0.480nM
    560908 6ur8:D (3.71) BS01 QMR ? GO:0004888 ... P0ABE7
    P43681
    32221310
    560909 6ur9:A (2.1) BS01 dna 2.7.7.7 GO:0000166 ... D9N168 32188786
    560910 6ur9:A (2.1) BS02 dna 2.7.7.7 GO:0000166 ... D9N168 32188786
    560911 6ur9:A (2.1) BS03 NG3 2.7.7.7 GO:0000166 ... D9N168 32188786
    560912 6ur9:A (2.1) BS04 CA 2.7.7.7 GO:0000166 ... D9N168 32188786
    560913 6ur9:D (2.1) BS01 dna 2.7.7.7 GO:0000166 ... D9N168 32188786
    560914 6ur9:D (2.1) BS02 dna 2.7.7.7 GO:0000166 ... D9N168 32188786
    560915 6ura:A (2.17) BS01 CAP 4.1.1.39 GO:0000287 ... A0A160T9D2 32868887
    560916 6ura:A (2.17) BS02 MG 4.1.1.39 GO:0000287 ... A0A160T9D2 32868887
    560917 6ura:A (2.17) BS03 CAP 4.1.1.39 GO:0000287 ... A0A160T9D2 32868887
    560918 6ura:B (2.17) BS01 CAP 4.1.1.39 GO:0000287 ... A0A160T9D2 32868887
    560919 6ura:B (2.17) BS02 CAP 4.1.1.39 GO:0000287 ... A0A160T9D2 32868887
    560920 6ura:B (2.17) BS03 MG 4.1.1.39 GO:0000287 ... A0A160T9D2 32868887
    560921 6ura:C (2.17) BS01 CAP 4.1.1.39 GO:0000287 ... A0A160T9D2 32868887
    560922 6ura:C (2.17) BS02 MG 4.1.1.39 GO:0000287 ... A0A160T9D2 32868887
    560923 6ura:C (2.17) BS03 CAP 4.1.1.39 GO:0000287 ... A0A160T9D2 32868887
    560924 6ura:D (2.17) BS01 CAP 4.1.1.39 GO:0000287 ... A0A160T9D2 32868887
    560925 6ura:D (2.17) BS02 CAP 4.1.1.39 GO:0000287 ... A0A160T9D2 32868887
    560926 6ura:D (2.17) BS03 MG 4.1.1.39 GO:0000287 ... A0A160T9D2 32868887
    560927 6urb:A (2.096) BS01 HEM ? GO:0046872 ... O69756 N/A
    560928 6urb:B (2.096) BS01 HEM ? GO:0046872 ... O69756 N/A
    560929 6urc:A (2.2) BS01 QFV 2.7.11.1
    3.1.26.-
    GO:0004521 ... O75460 31371506 BindingDB: IC50=13nM
    560930 6urc:B (2.2) BS01 QFV 2.7.11.1
    3.1.26.-
    GO:0004521 ... O75460 31371506 BindingDB: IC50=13nM
    560931 6urg:C (3.0) BS01 ZN ? GO:0003676 ... O95639 31810758
    560932 6uri:N (3.0) BS01 peptide ? GO:0005525 ... P03406 32719457
    560933 6uro:B (3.6) BS01 rna ? GO:0031124 ... Q9C0J8 31810758
    560934 6uro:C (3.6) BS01 rna ? GO:0003676 ... O95639 31810758
    560935 6uro:C (3.6) BS02 ZN ? GO:0003676 ... O95639 31810758
    560936 6uro:C (3.6) BS03 ZN ? GO:0003676 ... O95639 31810758
    560937 6uro:C (3.6) BS04 ZN ? GO:0003676 ... O95639 31810758
    560938 6urq:A (2.05) BS01 peptide 2.4.2.-
    2.4.2.30
    N/A O95271 32698014
    560939 6urq:B (2.05) BS01 peptide 2.4.2.-
    2.4.2.30
    N/A O95271 32698014
    560940 6urw:A (2.4) BS01 R7T 3.2.2.22 GO:0017148 ... P02879 32428396 MOAD: ic50=32uM
    560941 6urx:A (1.99) BS01 JMG 3.2.2.22 GO:0017148 ... P02879 32428396 MOAD: ic50=181uM
    560942 6ury:A (1.54) BS01 R6T 3.2.2.22 GO:0017148 ... P02879 32428396 MOAD: ic50=400uM
    560943 6us2:A (1.80013) BS01 S3O 3.6.1.-
    3.6.1.56
    GO:0001669 ... P36639 32184970 MOAD: Ki=5.2pM
    BindingDB: IC50=0.043000nM, Ki=1.7nM
    560944 6us3:A (1.47029) BS01 8JF 3.6.1.-
    3.6.1.56
    GO:0001669 ... P36639 32184970 MOAD: ic50=81nM
    BindingDB: IC50=81nM
    560945 6us4:A (1.95033) BS01 GN6 3.6.1.-
    3.6.1.56
    GO:0001669 ... P36639 32184970 MOAD: ic50=13nM
    BindingDB: IC50=13nM
    560946 6us5:A (2.25) BS01 dna 2.7.7.7 GO:0000166 ... D9N168 32188786
    560947 6us5:A (2.25) BS02 dna 2.7.7.7 GO:0000166 ... D9N168 32188786
    560948 6us5:A (2.25) BS03 XG4 2.7.7.7 GO:0000166 ... D9N168 32188786
    560949 6us5:A (2.25) BS04 MN 2.7.7.7 GO:0000166 ... D9N168 32188786
    560950 6us5:D (2.25) BS01 dna 2.7.7.7 GO:0000166 ... D9N168 32188786
    560951 6us5:D (2.25) BS02 dna 2.7.7.7 GO:0000166 ... D9N168 32188786
    560952 6us5:D (2.25) BS03 XG4 2.7.7.7 GO:0000166 ... D9N168 32188786
    560953 6us5:D (2.25) BS04 MN 2.7.7.7 GO:0000166 ... D9N168 32188786
    560954 6us6:A (1.5) BS01 QFY ? GO:0005576 ... P22629 32309932
    560955 6usa:A (2.406) BS01 PZJ 4.2.1.20 GO:0000162 ... P9WFY1 31930594
    560956 6usa:B (2.406) BS01 PZJ 4.2.1.20 GO:0000162 ... P9WFX9 31930594
    560957 6usa:B (2.406) BS02 P1T 4.2.1.20 GO:0000162 ... P9WFX9 31930594
    560958 6usa:C (2.406) BS01 PZJ 4.2.1.20 GO:0000162 ... P9WFY1 31930594
    560959 6usa:D (2.406) BS01 PZJ 4.2.1.20 GO:0000162 ... P9WFX9 31930594
    560960 6usa:D (2.406) BS02 P1T 4.2.1.20 GO:0000162 ... P9WFX9 31930594
    560961 6usa:F (2.406) BS01 PZJ 4.2.1.20 GO:0000162 ... P9WFX9 31930594
    560962 6usa:F (2.406) BS02 P1T 4.2.1.20 GO:0000162 ... P9WFX9 31930594
    560963 6usa:G (2.406) BS01 PZJ 4.2.1.20 GO:0000162 ... P9WFY1 31930594
    560964 6usa:H (2.406) BS01 PZJ 4.2.1.20 GO:0000162 ... P9WFX9 31930594
    560965 6usa:H (2.406) BS02 P1T 4.2.1.20 GO:0000162 ... P9WFX9 31930594
    560966 6usc:A (1.59) BS01 CA ? GO:0001934 ... Q8WWA0 31930911
    560967 6usc:A (1.59) BS02 CA ? GO:0001934 ... Q8WWA0 31930911
    560968 6usc:A (1.59) BS03 CA ? GO:0001934 ... Q8WWA0 31930911
    560969 6usc:A (1.59) BS04 KO2 ? GO:0001934 ... Q8WWA0 31930911 MOAD: ic50=0.7mM
    560970 6usc:A (1.59) BS05 KO2 ? GO:0001934 ... Q8WWA0 31930911 MOAD: ic50=0.7mM
    560971 6usc:B (1.59) BS01 CA ? GO:0001934 ... Q8WWA0 31930911
    560972 6usc:B (1.59) BS02 CA ? GO:0001934 ... Q8WWA0 31930911
    560973 6usc:B (1.59) BS03 CA ? GO:0001934 ... Q8WWA0 31930911
    560974 6usc:B (1.59) BS04 KO2 ? GO:0001934 ... Q8WWA0 31930911 MOAD: ic50=0.7mM
    560975 6usf:A (3.87) BS01 QMR ? GO:0004888 ... P0ABE7
    P43681
    32221310
    560976 6usf:D (3.87) BS01 QMR ? GO:0004888 ... P0ABE7
    P43681
    32221310
    560977 6usf:E (3.87) BS01 QMR ? GO:0004888 ... P17787 32221310 BindingDB: Ki=0.480nM
    560978 6usj:A (10.5) BS01 dna ? GO:0000786 ... P68431 33141820
    560979 6usj:A (10.5) BS02 dna ? GO:0000786 ... P68431 33141820
    560980 6usj:B (10.5) BS01 dna ? GO:0000781 ... P62805 33141820
    560981 6usj:B (10.5) BS02 dna ? GO:0000781 ... P62805 33141820
    560982 6usj:C (10.5) BS01 dna ? GO:0000786 ... P04908 33141820
    560983 6usj:C (10.5) BS02 dna ? GO:0000786 ... P04908 33141820
    560984 6usj:D (10.5) BS01 dna ? GO:0000786 ... P06899 33141820
    560985 6usj:D (10.5) BS02 dna ? GO:0000786 ... P06899 33141820
    560986 6usj:E (10.5) BS01 dna ? GO:0000786 ... P68431 33141820
    560987 6usj:E (10.5) BS02 dna ? GO:0000786 ... P68431 33141820
    560988 6usj:F (10.5) BS01 dna ? GO:0000781 ... P62805 33141820
    560989 6usj:F (10.5) BS02 dna ? GO:0000781 ... P62805 33141820
    560990 6usj:G (10.5) BS01 dna ? GO:0000786 ... P04908 33141820
    560991 6usj:G (10.5) BS02 dna ? GO:0000786 ... P04908 33141820
    560992 6usj:H (10.5) BS01 dna ? GO:0000786 ... P06899 33141820
    560993 6usj:H (10.5) BS02 dna ? GO:0000786 ... P06899 33141820
    560994 6usj:K (10.5) BS01 dna ? GO:0000786 ... P68431 33141820
    560995 6usj:K (10.5) BS02 dna ? GO:0000786 ... P68431 33141820
    560996 6usj:L (10.5) BS01 dna ? GO:0000781 ... P62805 33141820
    560997 6usj:L (10.5) BS02 dna ? GO:0000781 ... P62805 33141820
    560998 6usj:M (10.5) BS01 dna ? GO:0000786 ... P04908 33141820
    560999 6usj:M (10.5) BS02 dna ? GO:0000786 ... P04908 33141820
    561000 6usj:N (10.5) BS01 dna ? GO:0000786 ... P06899 33141820

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).