SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    562001 6uxj:A (1.4) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996
    562002 6uxj:A (1.4) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996 MOAD: Kd=17uM
    562003 6uxj:A (1.4) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996
    562004 6uxj:A (1.4) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996 MOAD: Kd=17uM
    562005 6uxj:B (1.4) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996
    562006 6uxj:B (1.4) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996 MOAD: Kd=17uM
    562007 6uxj:B (1.4) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996
    562008 6uxj:B (1.4) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996 MOAD: Kd=17uM
    562009 6uxj:C (1.4) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996
    562010 6uxj:C (1.4) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996 MOAD: Kd=17uM
    562011 6uxj:C (1.4) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996
    562012 6uxj:C (1.4) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996 MOAD: Kd=17uM
    562013 6uxj:D (1.4) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996
    562014 6uxj:D (1.4) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996 MOAD: Kd=17uM
    562015 6uxj:D (1.4) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996
    562016 6uxj:D (1.4) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 32014996 MOAD: Kd=17uM
    562017 6uxl:A (2.35) BS01 PLG 2.1.2.1 GO:0004372 ... K4FW35 32014996
    562018 6uxl:A (2.35) BS02 PLG 2.1.2.1 GO:0004372 ... K4FW35 32014996
    562019 6uxl:B (2.35) BS01 PLG 2.1.2.1 GO:0004372 ... K4FW35 32014996
    562020 6uxl:B (2.35) BS02 PLG 2.1.2.1 GO:0004372 ... K4FW35 32014996
    562021 6uxn:A (2.49) BS01 8SP ? GO:0042981 ... Q16611 32929280
    562022 6uxn:A (2.49) BS02 8SP ? GO:0042981 ... Q16611 32929280
    562023 6uxn:A (2.49) BS03 8SP ? GO:0042981 ... Q16611 32929280
    562024 6uxn:B (2.49) BS01 8SP ? GO:0042981 ... Q16611 32929280
    562025 6uxn:B (2.49) BS02 8SP ? GO:0042981 ... Q16611 32929280
    562026 6uxn:B (2.49) BS03 8SP ? GO:0042981 ... Q16611 32929280
    562027 6uxn:C (2.49) BS01 8SP ? GO:0042981 ... Q16611 32929280
    562028 6uxn:D (2.49) BS01 8SP ? GO:0042981 ... Q16611 32929280
    562029 6uxn:D (2.49) BS02 8SP ? GO:0042981 ... Q16611 32929280
    562030 6uxn:E (2.49) BS01 8SP ? GO:0042981 ... Q16611 32929280
    562031 6uxn:F (2.49) BS01 8SP ? GO:0042981 ... Q16611 32929280
    562032 6uxn:F (2.49) BS02 8SP ? GO:0042981 ... Q16611 32929280
    562033 6uxn:G (2.49) BS01 8SP ? GO:0042981 ... Q16611 32929280
    562034 6uxn:G (2.49) BS02 8SP ? GO:0042981 ... Q16611 32929280
    562035 6uxn:H (2.49) BS01 8SP ? GO:0042981 ... Q16611 32929280
    562036 6uxn:H (2.49) BS02 8SP ? GO:0042981 ... Q16611 32929280
    562037 6uxn:H (2.49) BS03 8SP ? GO:0042981 ... Q16611 32929280
    562038 6uxn:I (2.49) BS01 8SP ? GO:0042981 ... Q16611 32929280
    562039 6uxn:J (2.49) BS01 8SP ? GO:0042981 ... Q16611 32929280
    562040 6uxn:J (2.49) BS02 8SP ? GO:0042981 ... Q16611 32929280
    562041 6uxn:J (2.49) BS03 8SP ? GO:0042981 ... Q16611 32929280
    562042 6uxn:K (2.49) BS01 8SP ? GO:0042981 ... Q16611 32929280
    562043 6uxn:K (2.49) BS02 8SP ? GO:0042981 ... Q16611 32929280
    562044 6uxn:L (2.49) BS01 8SP ? GO:0042981 ... Q16611 32929280
    562045 6uxn:L (2.49) BS02 8SP ? GO:0042981 ... Q16611 32929280
    562046 6uxn:L (2.49) BS03 8SP ? GO:0042981 ... Q16611 32929280
    562047 6uxq:A (1.696) BS01 C8E ? GO:0042981 ... Q16611 32929280
    562048 6uxq:A (1.696) BS02 C8E ? GO:0042981 ... Q16611 32929280
    562049 6uxq:A (1.696) BS03 C8E ? GO:0042981 ... Q16611 32929280
    562050 6uxq:A (1.696) BS04 LBN ? GO:0042981 ... Q16611 32929280
    562051 6uxq:B (1.696) BS01 C8E ? GO:0042981 ... Q16611 32929280
    562052 6uxq:B (1.696) BS02 LBN ? GO:0042981 ... Q16611 32929280
    562053 6uxq:B (1.696) BS03 C8E ? GO:0042981 ... Q16611 32929280
    562054 6uxq:C (1.696) BS01 C8E ? GO:0042981 ... Q16611 32929280
    562055 6uxq:C (1.696) BS02 C8E ? GO:0042981 ... Q16611 32929280
    562056 6uxq:D (1.696) BS01 C8E ? GO:0042981 ... Q16611 32929280
    562057 6uxq:D (1.696) BS02 C8E ? GO:0042981 ... Q16611 32929280
    562058 6uxq:D (1.696) BS03 C8E ? GO:0042981 ... Q16611 32929280
    562059 6uxq:D (1.696) BS04 C8E ? GO:0042981 ... Q16611 32929280
    562060 6uxr:A (1.8) BS01 K6G ? GO:0042981 ... Q16611 32929280
    562061 6uxr:B (1.8) BS01 K6G ? GO:0042981 ... Q16611 32929280
    562062 6uxu:A (1.962) BS01 ZN 3.5.2.6 GO:0046872 ... E2JB04 32358058
    562063 6uxu:A (1.962) BS02 ZN 3.5.2.6 GO:0046872 ... E2JB04 32358058
    562064 6uxu:B (1.962) BS01 ZN 3.5.2.6 GO:0046872 ... E2JB04 32358058
    562065 6uxu:B (1.962) BS02 ZN 3.5.2.6 GO:0046872 ... E2JB04 32358058
    562066 6uxv:A (4.7) BS01 peptide 3.6.4.- GO:0000182 ... P22082 32188938
    562067 6uxv:A (4.7) BS02 peptide 3.6.4.- GO:0000182 ... P22082 32188938
    562068 6uxv:I (4.7) BS01 peptide ? N/A P18888 32188938
    562069 6uxw:A (8.96) BS01 dna 3.6.4.- GO:0000182 ... P22082 32188938
    562070 6uxw:A (8.96) BS02 dna 3.6.4.- GO:0000182 ... P22082 32188938
    562071 6uxw:A (8.96) BS03 peptide 3.6.4.- GO:0000182 ... P22082 32188938
    562072 6uxw:A (8.96) BS04 peptide 3.6.4.- GO:0000182 ... P22082 32188938
    562073 6uxw:A (8.96) BS05 ADP 3.6.4.- GO:0000182 ... P22082 32188938
    562074 6uxw:A (8.96) BS06 BEF 3.6.4.- GO:0000182 ... P22082 32188938
    562075 6uxw:I (8.96) BS01 peptide ? N/A P18888 32188938
    562076 6uxw:R (8.96) BS01 dna ? GO:0000786 ... P84233 32188938
    562077 6uxw:R (8.96) BS02 dna ? GO:0000786 ... P84233 32188938
    562078 6uxw:S (8.96) BS01 dna ? GO:0000786 ... P62799 32188938
    562079 6uxw:S (8.96) BS02 dna ? GO:0000786 ... P62799 32188938
    562080 6uxw:T (8.96) BS01 dna ? GO:0000786 ... P06897 32188938
    562081 6uxw:T (8.96) BS02 dna ? GO:0000786 ... P06897 32188938
    562082 6uxw:U (8.96) BS01 dna ? GO:0000786 ... P02281 32188938
    562083 6uxw:U (8.96) BS02 dna ? GO:0000786 ... P02281 32188938
    562084 6uxw:V (8.96) BS01 dna ? GO:0000786 ... P84233 32188938
    562085 6uxw:V (8.96) BS02 dna ? GO:0000786 ... P84233 32188938
    562086 6uxw:W (8.96) BS01 dna ? GO:0000786 ... P62799 32188938
    562087 6uxw:W (8.96) BS02 dna ? GO:0000786 ... P62799 32188938
    562088 6uxw:X (8.96) BS01 dna ? GO:0000786 ... P06897 32188938
    562089 6uxw:X (8.96) BS02 dna ? GO:0000786 ... P06897 32188938
    562090 6uxw:Y (8.96) BS01 dna ? GO:0000786 ... P02281 32188938
    562091 6uxw:Y (8.96) BS02 dna ? GO:0000786 ... P02281 32188938
    562092 6uxx:A (2.69) BS01 QL1 2.1.1.320 GO:0000387 ... O14744 32944135 BindingDB: EC50=4600nM
    562093 6uxy:A (2.57) BS01 QKY 2.1.1.320 GO:0000387 ... O14744 32944135 BindingDB: EC50=50nM
    562094 6uxz:B (2.8) BS01 QL4 ? GO:0009058 ... P94426 32557944
    562095 6uxz:C (2.8) BS01 QL4 ? GO:0009058 ... P94426 32557944
    562096 6uy0:A (3.23) BS01 ATP 7.6.2.2
    7.6.2.3
    GO:0005524 ... Q8HXQ5 32458799
    562097 6uy0:A (3.23) BS02 ADP 7.6.2.2
    7.6.2.3
    GO:0005524 ... Q8HXQ5 32458799
    562098 6uy0:A (3.23) BS03 MG 7.6.2.2
    7.6.2.3
    GO:0005524 ... Q8HXQ5 32458799
    562099 6uy0:A (3.23) BS04 MG 7.6.2.2
    7.6.2.3
    GO:0005524 ... Q8HXQ5 32458799
    562100 6uy0:A (3.23) BS05 CLR 7.6.2.2
    7.6.2.3
    GO:0005524 ... Q8HXQ5 32458799
    562101 6uy0:A (3.23) BS06 CLR 7.6.2.2
    7.6.2.3
    GO:0005524 ... Q8HXQ5 32458799
    562102 6uy3:A (2.0) BS01 MTX N/A N/A N/A 33514714
    562103 6uy4:A (2.796) BS01 QLA 1.3.5.2 GO:0004152 ... G4VFD7 32428996 BindingDB: IC50=1000nM
    562104 6uy4:A (2.796) BS02 FMN 1.3.5.2 GO:0004152 ... G4VFD7 32428996
    562105 6uy5:A (1.501) BS01 PLP 2.8.1.7
    3.13.1.-
    4.4.1.16
    GO:0001887 ... P77444 N/A
    562106 6uy5:B (1.501) BS01 PLP 2.8.1.7
    3.13.1.-
    4.4.1.16
    GO:0001887 ... P77444 N/A
    562107 6uya:A (1.74) BS01 QL7 2.7.11.1 GO:0000287 ... Q9NWZ3 32184965 BindingDB: Ki=1.50nM, IC50=0.190000nM
    562108 6uya:B (1.74) BS01 QL7 2.7.11.1 GO:0000287 ... Q9NWZ3 32184965 BindingDB: Ki=1.50nM, IC50=0.190000nM
    562109 6uya:C (1.74) BS01 QL7 2.7.11.1 GO:0000287 ... Q9NWZ3 32184965 BindingDB: Ki=1.50nM, IC50=0.190000nM
    562110 6uya:D (1.74) BS01 QL7 2.7.11.1 GO:0000287 ... Q9NWZ3 32184965 BindingDB: Ki=1.50nM, IC50=0.190000nM
    562111 6uyb:A (1.543) BS01 QSJ ? N/A Q15562 32579935 MOAD: Kd=6.2uM
    562112 6uyb:B (1.543) BS01 QSJ ? N/A Q15562 32579935 MOAD: Kd=6.2uM
    562113 6uyc:A (1.658) BS01 QLV ? N/A Q15562 32579935 MOAD: Kd=229nM
    562114 6uyc:B (1.658) BS01 QLV ? N/A Q15562 32579935 MOAD: Kd=229nM
    562115 6uyh:A (1.75) BS01 ANP 6.1.1.15 GO:0000166 ... A0A4V8H034 N/A
    562116 6uyh:A (1.75) BS02 HFG 6.1.1.15 GO:0000166 ... A0A4V8H034 N/A
    562117 6uyh:B (1.75) BS01 ANP 6.1.1.15 GO:0000166 ... A0A4V8H034 N/A
    562118 6uyh:B (1.75) BS02 HFG 6.1.1.15 GO:0000166 ... A0A4V8H034 N/A
    562119 6uyi:A (-1.00) BS01 peptide ? GO:0005634 ... Q16186 32160516
    562120 6uyj:A (-1.00) BS01 peptide ? GO:0005634 ... Q16186 32160516
    562121 6uyk:A (2.6) BS01 SF4 1.3.7.7 GO:0005524 ... Q9RFD6 33219127
    562122 6uyk:B (2.6) BS01 SF4 1.3.7.7 GO:0005524 ... Q9RFD6 33219127
    562123 6uyk:C (2.6) BS01 SF4 1.3.7.7 GO:0005524 ... Q9RFD6 33219127
    562124 6uyk:D (2.6) BS01 SF4 1.3.7.7 GO:0005524 ... Q9RFD6 33219127
    562125 6uyo:A (1.639) BS01 peptide ? N/A P63165 31879127
    562126 6uyo:C (1.639) BS01 peptide ? N/A P63165 31879127
    562127 6uyp:A (1.418) BS01 peptide ? N/A P63165 31879127
    562128 6uyq:A (1.501) BS01 peptide ? N/A P63165 31879127
    562129 6uyr:A (1.3) BS01 peptide ? N/A P63165 31879127
    562130 6uys:A (1.59) BS01 peptide ? N/A P63165 31879127
    562131 6uys:C (1.59) BS01 peptide ? N/A P63165 31879127
    562132 6uys:C (1.59) BS02 peptide ? N/A P63165 31879127
    562133 6uyt:A (1.662) BS01 peptide ? N/A P63165 31879127
    562134 6uyu:A (1.66) BS01 peptide ? N/A P63165 31879127
    562135 6uyu:C (1.66) BS01 peptide ? N/A P63165 31879127
    562136 6uyv:A (1.401) BS01 peptide ? N/A P63165 31879127
    562137 6uyx:A (1.7) BS01 peptide ? N/A P63165 31879127
    562138 6uyx:A (1.7) BS02 peptide ? N/A P63165 31879127
    562139 6uyx:C (1.7) BS01 peptide ? N/A P63165 31879127
    562140 6uyy:A (1.599) BS01 peptide ? N/A P63165 31879127
    562141 6uyz:A (1.4) BS01 peptide ? N/A P63165 31879127
    562142 6uyz:C (1.4) BS01 peptide ? N/A P63165 31879127
    562143 6uz0:A (3.24) BS01 9Z9 ? GO:0001518 ... P15389
    P42212
    31866066
    562144 6uz0:A (3.24) BS02 9Z9 ? GO:0001518 ... P15389
    P42212
    31866066
    562145 6uz0:A (3.24) BS03 9Z9 ? GO:0001518 ... P15389
    P42212
    31866066
    562146 6uz0:A (3.24) BS04 9Z9 ? GO:0001518 ... P15389
    P42212
    31866066
    562147 6uz0:A (3.24) BS05 6OU ? GO:0001518 ... P15389
    P42212
    31866066
    562148 6uz0:A (3.24) BS06 6OU ? GO:0001518 ... P15389
    P42212
    31866066
    562149 6uz0:A (3.24) BS07 6OU ? GO:0001518 ... P15389
    P42212
    31866066
    562150 6uz0:A (3.24) BS08 6OU ? GO:0001518 ... P15389
    P42212
    31866066
    562151 6uz0:A (3.24) BS09 6OU ? GO:0001518 ... P15389
    P42212
    31866066
    562152 6uz0:A (3.24) BS10 K4D ? GO:0001518 ... P15389
    P42212
    31866066
    562153 6uz1:A (3.14) BS01 peptide ? N/A A0A140T913 33074657
    562154 6uz1:F (3.14) BS01 peptide ? N/A A0A140T913 33074657
    562155 6uz3:A (3.5) BS01 9Z9 ? GO:0001518 ... P15389
    P42212
    31866066
    562156 6uz3:A (3.5) BS02 9Z9 ? GO:0001518 ... P15389
    P42212
    31866066
    562157 6uz3:A (3.5) BS03 9Z9 ? GO:0001518 ... P15389
    P42212
    31866066
    562158 6uz3:A (3.5) BS04 9Z9 ? GO:0001518 ... P15389
    P42212
    31866066
    562159 6uz3:A (3.5) BS05 6OU ? GO:0001518 ... P15389
    P42212
    31866066
    562160 6uz3:A (3.5) BS06 6OU ? GO:0001518 ... P15389
    P42212
    31866066
    562161 6uz3:A (3.5) BS07 6OU ? GO:0001518 ... P15389
    P42212
    31866066
    562162 6uz3:A (3.5) BS08 6OU ? GO:0001518 ... P15389
    P42212
    31866066
    562163 6uz3:A (3.5) BS09 6OU ? GO:0001518 ... P15389
    P42212
    31866066
    562164 6uz6:A (1.66) BS01 GLY ? GO:0015276 ... P35439 31969570
    562165 6uz6:B (1.66) BS01 GLU ? GO:0015276 ... Q00959 31969570
    562166 6uz7:1 (3.6) BS01 rna ? GO:0003743 ... Q6CIX3 31900355
    562167 6uz7:1 (3.6) BS02 rna ? GO:0003743 ... Q6CIX3 31900355
    562168 6uz7:A (3.6) BS01 rna ? GO:0000028 ... Q6CN12 31900355
    562169 6uz7:AA (3.6) BS01 rna ? GO:0002181 ... Q6CQM3 31900355
    562170 6uz7:AB (3.6) BS01 rna ? GO:0003723 ... Q6CJR7 31900355
    562171 6uz7:AC (3.6) BS01 rna ? GO:0003735 ... Q6CW41 31900355
    562172 6uz7:AC (3.6) BS02 rna ? GO:0003735 ... Q6CW41 31900355
    562173 6uz7:AD (3.6) BS01 rna ? GO:0000027 ... Q6CRR9 31900355
    562174 6uz7:AD (3.6) BS02 rna ? GO:0000027 ... Q6CRR9 31900355
    562175 6uz7:AE (3.6) BS01 rna ? GO:0000027 ... Q6CWE7 31900355
    562176 6uz7:AF (3.6) BS01 rna ? GO:0000463 ... Q6CS71 31900355
    562177 6uz7:AF (3.6) BS02 rna ? GO:0000463 ... Q6CS71 31900355
    562178 6uz7:AG (3.6) BS01 rna ? GO:0003723 ... B4UN96 31900355
    562179 6uz7:AG (3.6) BS02 rna ? GO:0003723 ... B4UN96 31900355
    562180 6uz7:AH (3.6) BS01 rna ? GO:0002181 ... Q6CLA6 31900355
    562181 6uz7:AI (3.6) BS01 rna ? GO:0003735 ... Q6CRX7 31900355
    562182 6uz7:AI (3.6) BS02 rna ? GO:0003735 ... Q6CRX7 31900355
    562183 6uz7:AJ (3.6) BS01 rna ? GO:0003735 ... Q6CKT4 31900355
    562184 6uz7:AJ (3.6) BS02 rna ? GO:0003735 ... Q6CKT4 31900355
    562185 6uz7:AK (3.6) BS01 rna N/A N/A N/A 31900355
    562186 6uz7:AL (3.6) BS01 rna ? GO:0003723 ... Q875M0 31900355
    562187 6uz7:AM (3.6) BS01 rna ? GO:0003723 ... Q6CVB1 31900355
    562188 6uz7:AN (3.6) BS01 rna ? GO:0002181 ... Q6CJL7 31900355
    562189 6uz7:AN (3.6) BS02 rna ? GO:0002181 ... Q6CJL7 31900355
    562190 6uz7:AO (3.6) BS01 rna ? GO:0003729 ... Q6CL98 31900355
    562191 6uz7:AP (3.6) BS01 rna ? GO:0002181 ... Q6CXQ6 31900355
    562192 6uz7:AP (3.6) BS02 rna ? GO:0002181 ... Q6CXQ6 31900355
    562193 6uz7:AQ (3.6) BS01 rna ? GO:0003723 ... Q6CXL8 31900355
    562194 6uz7:AR (3.6) BS01 rna ? GO:0003723 ... Q6CNH9 31900355
    562195 6uz7:AR (3.6) BS02 rna ? GO:0003723 ... Q6CNH9 31900355
    562196 6uz7:AS (3.6) BS01 rna N/A GO:0003735 ... N/A 31900355
    562197 6uz7:AS (3.6) BS02 rna N/A GO:0003735 ... N/A 31900355
    562198 6uz7:AT (3.6) BS01 rna ? GO:0003735 ... Q6CM20 31900355
    562199 6uz7:AT (3.6) BS02 rna ? GO:0003735 ... Q6CM20 31900355
    562200 6uz7:AU (3.6) BS01 rna ? GO:0002181 ... Q6CRZ8 31900355

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).