SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    562201 6uz7:AV (3.6) BS01 rna ? GO:0003735 ... Q6CP75 31900355
    562202 6uz7:AW (3.6) BS01 rna ? GO:0002181 ... P38665 31900355
    562203 6uz7:AX (3.6) BS01 rna ? GO:0003735 ... P48045 31900355
    562204 6uz7:AX (3.6) BS02 rna ? GO:0003735 ... P48045 31900355
    562205 6uz7:AY (3.6) BS01 rna ? GO:0003723 ... Q6CW97 31900355
    562206 6uz7:AY (3.6) BS02 rna ? GO:0003723 ... Q6CW97 31900355
    562207 6uz7:AZ (3.6) BS01 rna ? GO:0003735 ... Q6CPN9 31900355
    562208 6uz7:B (3.6) BS01 rna ? GO:0003735 ... Q6CWD0 31900355
    562209 6uz7:B (3.6) BS02 rna ? GO:0003735 ... Q6CWD0 31900355
    562210 6uz7:Ba (3.6) BS01 rna ? GO:0003735 ... Q8J287 31900355
    562211 6uz7:Bb (3.6) BS01 rna ? GO:0002181 ... Q6CQM1 31900355
    562212 6uz7:Bc (3.6) BS01 rna ? GO:0003723 ... P38664 31900355
    562213 6uz7:Bd (3.6) BS01 rna ? GO:0002181 ... Q6CWM6 31900355
    562214 6uz7:Be (3.6) BS01 rna ? GO:0003735 ... Q6CP82 31900355
    562215 6uz7:Bf (3.6) BS01 rna ? GO:0003735 ... Q6CRP7 31900355
    562216 6uz7:Bg (3.6) BS01 rna ? GO:0003735 ... Q6CU17 31900355
    562217 6uz7:Bh (3.6) BS01 rna ? GO:0000463 ... Q6CL71 31900355
    562218 6uz7:Bh (3.6) BS02 rna ? GO:0000463 ... Q6CL71 31900355
    562219 6uz7:Bi (3.6) BS01 rna ? GO:0003735 ... Q6CR18 31900355
    562220 6uz7:Bj (3.6) BS01 rna ? GO:0003723 ... Q6CUW0 31900355
    562221 6uz7:Bj (3.6) BS02 rna ? GO:0003723 ... Q6CUW0 31900355
    562222 6uz7:Bj (3.6) BS03 ZN ? GO:0003723 ... Q6CUW0 31900355
    562223 6uz7:Bk (3.6) BS01 rna ? GO:0003735 ... Q6CSS8 31900355
    562224 6uz7:Bl (3.6) BS01 rna N/A GO:0003735 ... N/A 31900355
    562225 6uz7:Bl (3.6) BS02 rna N/A GO:0003735 ... N/A 31900355
    562226 6uz7:Bm (3.6) BS01 rna ? GO:0003735 ... Q9Y854 31900355
    562227 6uz7:Bm (3.6) BS02 ZN ? GO:0003735 ... Q9Y854 31900355
    562228 6uz7:Bo (3.6) BS01 rna ? GO:0003735 ... P31027 31900355
    562229 6uz7:Bo (3.6) BS02 rna ? GO:0003735 ... P31027 31900355
    562230 6uz7:Bp (3.6) BS01 rna ? GO:0003735 ... Q6CPC5 31900355
    562231 6uz7:Bq (3.6) BS01 rna ? GO:0003723 ... Q6CWR9 31900355
    562232 6uz7:Br (3.6) BS01 rna ? GO:0000027 ... Q6CW89 31900355
    562233 6uz7:C (3.6) BS01 rna ? GO:0003723 ... Q6CKL3 31900355
    562234 6uz7:D (3.6) BS01 rna ? GO:0003723 ... Q6CRK7 31900355
    562235 6uz7:E (3.6) BS01 rna ? GO:0003723 ... Q6CWJ2 31900355
    562236 6uz7:F (3.6) BS01 rna ? GO:0003723 ... Q6CRA3 31900355
    562237 6uz7:G (3.6) BS01 rna ? GO:0003735 ... Q6CM04 31900355
    562238 6uz7:H (3.6) BS01 rna ? GO:0003735 ... Q6CTD6 31900355
    562239 6uz7:I (3.6) BS01 rna ? GO:0003735 ... Q6CMG3 31900355
    562240 6uz7:I (3.6) BS02 rna ? GO:0003735 ... Q6CMG3 31900355
    562241 6uz7:J (3.6) BS01 rna ? GO:0003723 ... Q6CM18 31900355
    562242 6uz7:K (3.6) BS01 rna ? GO:0003723 ... Q6CVZ5 31900355
    562243 6uz7:L (3.6) BS01 rna ? GO:0003735 ... Q6CX80 31900355
    562244 6uz7:M (3.6) BS01 rna ? GO:0003735 ... Q6CLU4 31900355
    562245 6uz7:N (3.6) BS01 rna ? GO:0003735 ... Q6CJK0 31900355
    562246 6uz7:O (3.6) BS01 rna ? GO:0003735 ... P27069 31900355
    562247 6uz7:P (3.6) BS01 rna ? GO:0000028 ... Q6CKV4 31900355
    562248 6uz7:Q (3.6) BS01 rna ? GO:0000462 ... Q875N2 31900355
    562249 6uz7:R (3.6) BS01 rna ? GO:0003735 ... Q6CWU3 31900355
    562250 6uz7:S (3.6) BS01 rna ? GO:0003676 ... Q6CWT9 31900355
    562251 6uz7:T (3.6) BS01 rna ? GO:0000028 ... Q6CXM0 31900355
    562252 6uz7:U (3.6) BS01 rna ? GO:0003735 ... Q6CIM1 31900355
    562253 6uz7:W (3.6) BS01 rna ? GO:0003735 ... Q6CW21 31900355
    562254 6uz7:X (3.6) BS01 rna ? GO:0003735 ... Q875M3 31900355
    562255 6uz7:Y (3.6) BS01 rna ? GO:0003735 ... Q6CU44 31900355
    562256 6uz7:Z (3.6) BS01 rna ? GO:0005840 ... Q6CW78 31900355
    562257 6uz7:a (3.6) BS01 rna ? GO:0003729 ... Q6CS01 31900355
    562258 6uz7:a (3.6) BS02 ZN ? GO:0003729 ... Q6CS01 31900355
    562259 6uz7:b (3.6) BS01 rna ? GO:0003735 ... Q6CNL2 31900355
    562260 6uz7:b (3.6) BS02 ZN ? GO:0003735 ... Q6CNL2 31900355
    562261 6uz7:c (3.6) BS01 rna ? GO:0000028 ... P33285 31900355
    562262 6uz7:d (3.6) BS01 rna ? GO:0002181 ... Q6CPG3 31900355
    562263 6uz7:e (3.6) BS01 rna ? GO:0003735 ... Q6CUH5 31900355
    562264 6uz7:f (3.6) BS01 rna ? GO:0003735 ... P69061 31900355
    562265 6uz7:g (3.6) BS01 rna ? GO:0006417 ... Q6CNI7 31900355
    562266 6uz8:A (2.84) BS01 SBM ? GO:0005216 ... Q9Y210 32149605
    562267 6uz8:A (2.84) BS02 Y01 ? GO:0005216 ... Q9Y210 32149605
    562268 6uz8:A (2.84) BS03 Y01 ? GO:0005216 ... Q9Y210 32149605
    562269 6uz8:A (2.84) BS04 R0D ? GO:0005216 ... Q9Y210 32149605
    562270 6uz8:B (2.84) BS01 Y01 ? GO:0005216 ... Q9Y210 32149605
    562271 6uz8:B (2.84) BS02 SBM ? GO:0005216 ... Q9Y210 32149605
    562272 6uz8:B (2.84) BS03 Y01 ? GO:0005216 ... Q9Y210 32149605
    562273 6uz8:B (2.84) BS04 R0D ? GO:0005216 ... Q9Y210 32149605
    562274 6uz8:C (2.84) BS01 R0D ? GO:0005216 ... Q9Y210 32149605
    562275 6uz8:C (2.84) BS02 Y01 ? GO:0005216 ... Q9Y210 32149605
    562276 6uz8:C (2.84) BS03 SBM ? GO:0005216 ... Q9Y210 32149605
    562277 6uz8:C (2.84) BS04 Y01 ? GO:0005216 ... Q9Y210 32149605
    562278 6uz8:D (2.84) BS01 R0D ? GO:0005216 ... Q9Y210 32149605
    562279 6uz8:D (2.84) BS02 SBM ? GO:0005216 ... Q9Y210 32149605
    562280 6uz8:D (2.84) BS03 Y01 ? GO:0005216 ... Q9Y210 32149605
    562281 6uz8:D (2.84) BS04 Y01 ? GO:0005216 ... Q9Y210 32149605
    562282 6uza:A (3.08) BS01 R0G ? GO:0005216 ... Q9Y210 32149605
    562283 6uza:A (3.08) BS02 S9Y ? GO:0005216 ... Q9Y210 32149605
    562284 6uza:A (3.08) BS03 Y01 ? GO:0005216 ... Q9Y210 32149605
    562285 6uza:A (3.08) BS04 Y01 ? GO:0005216 ... Q9Y210 32149605
    562286 6uza:B (3.08) BS01 Y01 ? GO:0005216 ... Q9Y210 32149605
    562287 6uza:B (3.08) BS02 R0G ? GO:0005216 ... Q9Y210 32149605
    562288 6uza:B (3.08) BS03 S9Y ? GO:0005216 ... Q9Y210 32149605
    562289 6uza:B (3.08) BS04 Y01 ? GO:0005216 ... Q9Y210 32149605
    562290 6uza:C (3.08) BS01 Y01 ? GO:0005216 ... Q9Y210 32149605
    562291 6uza:C (3.08) BS02 R0G ? GO:0005216 ... Q9Y210 32149605
    562292 6uza:C (3.08) BS03 S9Y ? GO:0005216 ... Q9Y210 32149605
    562293 6uza:C (3.08) BS04 Y01 ? GO:0005216 ... Q9Y210 32149605
    562294 6uza:D (3.08) BS01 Y01 ? GO:0005216 ... Q9Y210 32149605
    562295 6uza:D (3.08) BS02 R0G ? GO:0005216 ... Q9Y210 32149605
    562296 6uza:D (3.08) BS03 S9Y ? GO:0005216 ... Q9Y210 32149605
    562297 6uza:D (3.08) BS04 Y01 ? GO:0005216 ... Q9Y210 32149605
    562298 6uzb:A (3.2) BS01 CA ? GO:0005515 ... P13423 32047164
    562299 6uzb:A (3.2) BS02 CA ? GO:0005515 ... P13423 32047164
    562300 6uzb:B (3.2) BS01 CA ? GO:0005515 ... P13423 32047164
    562301 6uzb:B (3.2) BS02 CA ? GO:0005515 ... P13423 32047164
    562302 6uzb:C (3.2) BS01 CA ? GO:0005515 ... P13423 32047164
    562303 6uzb:C (3.2) BS02 CA ? GO:0005515 ... P13423 32047164
    562304 6uzb:D (3.2) BS01 CA ? GO:0005515 ... P13423 32047164
    562305 6uzb:D (3.2) BS02 CA ? GO:0005515 ... P13423 32047164
    562306 6uzb:E (3.2) BS01 CA ? GO:0005515 ... P13423 32047164
    562307 6uzb:E (3.2) BS02 CA ? GO:0005515 ... P13423 32047164
    562308 6uzb:F (3.2) BS01 CA ? GO:0005515 ... P13423 32047164
    562309 6uzb:F (3.2) BS02 CA ? GO:0005515 ... P13423 32047164
    562310 6uzb:G (3.2) BS01 CA ? GO:0005515 ... P13423 32047164
    562311 6uzb:G (3.2) BS02 CA ? GO:0005515 ... P13423 32047164
    562312 6uzd:A (3.4) BS01 CA ? GO:0005515 ... P13423 32047164
    562313 6uzd:A (3.4) BS02 CA ? GO:0005515 ... P13423 32047164
    562314 6uzd:B (3.4) BS01 CA ? GO:0005515 ... P13423 32047164
    562315 6uzd:B (3.4) BS02 CA ? GO:0005515 ... P13423 32047164
    562316 6uzd:C (3.4) BS01 CA ? GO:0005515 ... P13423 32047164
    562317 6uzd:C (3.4) BS02 CA ? GO:0005515 ... P13423 32047164
    562318 6uzd:D (3.4) BS01 CA ? GO:0005515 ... P13423 32047164
    562319 6uzd:D (3.4) BS02 CA ? GO:0005515 ... P13423 32047164
    562320 6uzd:E (3.4) BS01 CA ? GO:0005515 ... P13423 32047164
    562321 6uzd:E (3.4) BS02 CA ? GO:0005515 ... P13423 32047164
    562322 6uzd:F (3.4) BS01 CA ? GO:0005515 ... P13423 32047164
    562323 6uzd:F (3.4) BS02 CA ? GO:0005515 ... P13423 32047164
    562324 6uzd:G (3.4) BS01 CA ? GO:0005515 ... P13423 32047164
    562325 6uzd:G (3.4) BS02 CA ? GO:0005515 ... P13423 32047164
    562326 6uze:A (3.4) BS01 CA ? GO:0005515 ... P13423 32047164
    562327 6uze:A (3.4) BS02 CA ? GO:0005515 ... P13423 32047164
    562328 6uze:B (3.4) BS01 CA ? GO:0005515 ... P13423 32047164
    562329 6uze:B (3.4) BS02 CA ? GO:0005515 ... P13423 32047164
    562330 6uze:C (3.4) BS01 CA ? GO:0005515 ... P13423 32047164
    562331 6uze:C (3.4) BS02 CA ? GO:0005515 ... P13423 32047164
    562332 6uze:D (3.4) BS01 CA ? GO:0005515 ... P13423 32047164
    562333 6uze:D (3.4) BS02 CA ? GO:0005515 ... P13423 32047164
    562334 6uze:E (3.4) BS01 CA ? GO:0005515 ... P13423 32047164
    562335 6uze:E (3.4) BS02 CA ? GO:0005515 ... P13423 32047164
    562336 6uze:F (3.4) BS01 CA ? GO:0005515 ... P13423 32047164
    562337 6uze:F (3.4) BS02 CA ? GO:0005515 ... P13423 32047164
    562338 6uze:G (3.4) BS01 CA ? GO:0005515 ... P13423 32047164
    562339 6uze:G (3.4) BS02 CA ? GO:0005515 ... P13423 32047164
    562340 6uzg:A (1.94) BS01 GLY ? GO:0015276 ... P35439 31969570
    562341 6uzg:B (1.94) BS01 QM1 ? GO:0015276 ... Q00959 31969570
    562342 6uzi:A (2.8) BS01 FAD 1.8.1.4 GO:0000166 ... A0A077ELH4 N/A
    562343 6uzi:A (2.8) BS02 ZN 1.8.1.4 GO:0000166 ... A0A077ELH4 N/A
    562344 6uzi:B (2.8) BS01 ZN 1.8.1.4 GO:0000166 ... A0A077ELH4 N/A
    562345 6uzi:B (2.8) BS02 FAD 1.8.1.4 GO:0000166 ... A0A077ELH4 N/A
    562346 6uzi:C (2.8) BS01 FAD 1.8.1.4 GO:0000166 ... A0A077ELH4 N/A
    562347 6uzi:C (2.8) BS02 ZN 1.8.1.4 GO:0000166 ... A0A077ELH4 N/A
    562348 6uzi:D (2.8) BS01 ZN 1.8.1.4 GO:0000166 ... A0A077ELH4 N/A
    562349 6uzi:D (2.8) BS02 FAD 1.8.1.4 GO:0000166 ... A0A077ELH4 N/A
    562350 6uzk:A (1.924) BS01 QMA ? GO:0005856 ... O00522 33977234
    562351 6uzk:B (1.924) BS01 MG 3.6.5.2 GO:0003924 ... P61224 33977234
    562352 6uzk:B (1.924) BS02 GNP 3.6.5.2 GO:0003924 ... P61224 33977234
    562353 6uzm:A (1.798) BS01 peptide ? N/A F4NBQ8 N/A
    562354 6uzn:A (2.22) BS01 peptide ? N/A F4NBQ8 N/A
    562355 6uzo:A (2.349) BS01 peptide ? N/A F4NBQ8 N/A
    562356 6uzp:A (2.08) BS01 peptide ? N/A D9J307 N/A
    562357 6uzq:A (2.395) BS01 peptide ? N/A D9J307 N/A
    562358 6uzr:A (1.87) BS01 GLY ? GO:0015276 ... P35439 31969570
    562359 6uzr:B (1.87) BS01 QM1 ? GO:0015276 ... Q00959 31969570
    562360 6uzs:A (1.9) BS01 peptide ? N/A D9J307 N/A
    562361 6uzu:A (1.5) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    562362 6uzu:A (1.5) BS02 6LU 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A MOAD: Ki=7nM
    BindingDB: Ki=1765nM
    562363 6uzv:0 (3.1) BS01 CLA ? GO:0005886 ... P37277 33077842
    562364 6uzv:0 (3.1) BS02 CLA ? GO:0005886 ... P37277 33077842
    562365 6uzv:0 (3.1) BS03 CLA ? GO:0005886 ... P37277 33077842
    562366 6uzv:0 (3.1) BS04 CLA ? GO:0005886 ... P37277 33077842
    562367 6uzv:0 (3.1) BS05 CLA ? GO:0005886 ... P37277 33077842
    562368 6uzv:0 (3.1) BS06 CLA ? GO:0005886 ... P37277 33077842
    562369 6uzv:0 (3.1) BS07 CLA ? GO:0005886 ... P37277 33077842
    562370 6uzv:0 (3.1) BS08 CLA ? GO:0005886 ... P37277 33077842
    562371 6uzv:0 (3.1) BS09 CA ? GO:0005886 ... P37277 33077842
    562372 6uzv:0 (3.1) BS10 CLA ? GO:0005886 ... P37277 33077842
    562373 6uzv:0 (3.1) BS11 CLA ? GO:0005886 ... P37277 33077842
    562374 6uzv:0 (3.1) BS12 CLA ? GO:0005886 ... P37277 33077842
    562375 6uzv:1 (3.1) BS01 CL0 1.97.1.12 GO:0000287 ... P29254 33077842
    562376 6uzv:1 (3.1) BS02 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562377 6uzv:1 (3.1) BS03 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562378 6uzv:1 (3.1) BS04 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562379 6uzv:1 (3.1) BS05 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562380 6uzv:1 (3.1) BS06 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562381 6uzv:1 (3.1) BS07 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562382 6uzv:1 (3.1) BS08 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562383 6uzv:1 (3.1) BS09 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562384 6uzv:1 (3.1) BS10 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562385 6uzv:1 (3.1) BS11 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562386 6uzv:1 (3.1) BS12 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562387 6uzv:1 (3.1) BS13 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562388 6uzv:1 (3.1) BS14 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562389 6uzv:1 (3.1) BS15 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562390 6uzv:1 (3.1) BS16 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562391 6uzv:1 (3.1) BS17 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562392 6uzv:1 (3.1) BS18 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562393 6uzv:1 (3.1) BS19 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562394 6uzv:1 (3.1) BS20 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562395 6uzv:1 (3.1) BS21 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562396 6uzv:1 (3.1) BS22 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562397 6uzv:1 (3.1) BS23 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562398 6uzv:1 (3.1) BS24 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562399 6uzv:1 (3.1) BS25 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    562400 6uzv:1 (3.1) BS26 CLA 1.97.1.12 GO:0000287 ... P29254 33077842

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).