SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    564201 6v8s:J (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    564202 6v8s:J (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    564203 6v8s:J (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    564204 6v8s:J (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    564205 6v8s:J (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    564206 6v8s:J (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    564207 6v8s:K (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    564208 6v8s:K (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    564209 6v8s:K (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    564210 6v8s:K (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    564211 6v8s:K (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    564212 6v8s:K (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    564213 6v8s:L (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    564214 6v8s:L (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    564215 6v8s:L (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    564216 6v8s:L (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    564217 6v8s:L (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    564218 6v8s:M (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    564219 6v8s:M (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    564220 6v8s:M (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    564221 6v8s:M (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    564222 6v8s:M (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    564223 6v8s:M (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    564224 6v8s:M (2.1) BS07 2AN ? GO:0004864 ... B0YIU5 N/A
    564225 6v8s:M (2.1) BS08 2AN ? GO:0004864 ... B0YIU5 N/A
    564226 6v8s:N (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    564227 6v8s:N (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    564228 6v8s:N (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    564229 6v8s:N (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    564230 6v8s:N (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    564231 6v8s:N (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    564232 6v8s:O (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    564233 6v8s:O (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    564234 6v8s:O (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    564235 6v8s:O (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    564236 6v8s:O (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    564237 6v8s:O (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    564238 6v8s:P (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    564239 6v8s:P (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    564240 6v8s:P (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    564241 6v8s:P (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    564242 6v8s:P (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    564243 6v8s:P (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    564244 6v8s:P (2.1) BS07 2AN ? GO:0004864 ... B0YIU5 N/A
    564245 6v8s:P (2.1) BS08 2AN ? GO:0004864 ... B0YIU5 N/A
    564246 6v8t:A (2.1) BS01 C6V ? N/A P03372 35575456 BindingDB: IC50=6.0nM
    564247 6v8t:B (2.1) BS01 C6V ? N/A P03372 35575456 BindingDB: IC50=6.0nM
    564248 6v8u:A (2.103) BS01 dna ? N/A Q86T24 32352758
    564249 6v8u:A (2.103) BS02 dna ? N/A Q86T24 32352758
    564250 6v8u:A (2.103) BS03 ZN ? N/A Q86T24 32352758
    564251 6v8u:A (2.103) BS04 ZN ? N/A Q86T24 32352758
    564252 6v8u:A (2.103) BS05 ZN ? N/A Q86T24 32352758
    564253 6v8v:A (1.8) BS01 CAZ 3.5.2.6 GO:0008800 ... Q9L5C7 32299911
    564254 6v8w:A (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564255 6v8w:A (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564256 6v8w:B (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564257 6v8w:B (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564258 6v8w:C (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564259 6v8w:C (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564260 6v8w:D (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564261 6v8w:D (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564262 6v8w:E (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564263 6v8w:E (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564264 6v8w:F (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564265 6v8w:F (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564266 6v8w:G (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564267 6v8w:G (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564268 6v8w:H (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564269 6v8w:H (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564270 6v8w:I (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564271 6v8w:J (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564272 6v8w:J (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564273 6v8w:K (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564274 6v8w:L (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564275 6v8w:L (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564276 6v8w:M (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564277 6v8w:N (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564278 6v8w:N (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564279 6v8w:O (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564280 6v8w:O (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564281 6v8w:P (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564282 6v8w:P (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564283 6v8w:Q (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564284 6v8w:R (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564285 6v8w:R (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564286 6v8w:S (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564287 6v8w:T (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564288 6v8w:U (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564289 6v8w:U (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564290 6v8w:V (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564291 6v8w:W (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564292 6v8w:W (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564293 6v8w:X (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564294 6v8w:X (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564295 6v8w:Y (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564296 6v8w:Y (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564297 6v8w:Z (2.8) BS01 peptide ? N/A Q8N8U2 32470319
    564298 6v8w:Z (2.8) BS02 peptide ? N/A Q8N8U2 32470319
    564299 6v8y:A (1.53) BS01 NA ? GO:0005267 ... Q81HW2 33953928
    564300 6v90:A (2.04) BS01 QSD 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 32181984 MOAD: ic50=0.0088uM
    BindingDB: IC50=19nM
    564301 6v92:D (20.0) BS01 peptide ? GO:0000785 ... P38210 31886770
    564302 6v92:F (20.0) BS01 peptide ? GO:0000724 ... Q06488 31886770
    564303 6v92:I (20.0) BS01 peptide ? GO:0000785 ... P43609 31886770
    564304 6v92:I (20.0) BS02 ZN ? GO:0000785 ... P43609 31886770
    564305 6v92:N (20.0) BS01 peptide ? GO:0000785 ... Q03124 31886770
    564306 6v92:O (20.0) BS01 peptide ? GO:0000785 ... Q07979 31886770
    564307 6v92:a (20.0) BS01 dna ? GO:0000786 ... P68431 31886770
    564308 6v92:a (20.0) BS02 dna ? GO:0000786 ... P68431 31886770
    564309 6v92:b (20.0) BS01 dna ? GO:0000781 ... P62805 31886770
    564310 6v92:b (20.0) BS02 dna ? GO:0000781 ... P62805 31886770
    564311 6v92:c (20.0) BS01 dna ? GO:0000786 ... P04908 31886770
    564312 6v92:c (20.0) BS02 dna ? GO:0000786 ... P04908 31886770
    564313 6v92:d (20.0) BS01 dna ? GO:0000786 ... O60814 31886770
    564314 6v92:d (20.0) BS02 dna ? GO:0000786 ... O60814 31886770
    564315 6v92:e (20.0) BS01 dna ? GO:0000786 ... P68431 31886770
    564316 6v92:e (20.0) BS02 dna ? GO:0000786 ... P68431 31886770
    564317 6v92:f (20.0) BS01 dna ? GO:0000781 ... P62805 31886770
    564318 6v92:f (20.0) BS02 dna ? GO:0000781 ... P62805 31886770
    564319 6v92:g (20.0) BS01 dna ? GO:0000786 ... P04908 31886770
    564320 6v92:g (20.0) BS02 dna ? GO:0000786 ... P04908 31886770
    564321 6v92:h (20.0) BS01 dna ? GO:0000786 ... O60814 31886770
    564322 6v92:h (20.0) BS02 dna ? GO:0000786 ... O60814 31886770
    564323 6v93:A (3.1) BS01 dna 2.7.7.7 GO:0000166 ... P14284 32807989
    564324 6v93:A (3.1) BS02 dna 2.7.7.7 GO:0000166 ... P14284 32807989
    564325 6v93:A (3.1) BS03 SF4 2.7.7.7 GO:0000166 ... P14284 32807989
    564326 6v93:A (3.1) BS04 CA 2.7.7.7 GO:0000166 ... P14284 32807989
    564327 6v93:A (3.1) BS05 CA 2.7.7.7 GO:0000166 ... P14284 32807989
    564328 6v93:A (3.1) BS06 DCP 2.7.7.7 GO:0000166 ... P14284 32807989
    564329 6v94:A (1.8) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 32673492
    564330 6v94:A (1.8) BS02 MG 3.6.5.2 GO:0003924 ... P01112 32673492
    564331 6v94:B (1.8) BS01 QTV ? GO:0005085 ... Q07889 32673492 BindingDB: Kd=1200000nM
    564332 6v95:A (1.78) BS01 QSG ? GO:0030246 ... P02872 33135679 MOAD: Kd=495uM
    564333 6v95:A (1.78) BS02 MN ? GO:0030246 ... P02872 33135679
    564334 6v95:A (1.78) BS03 CA ? GO:0030246 ... P02872 33135679
    564335 6v95:B (1.78) BS01 QSG ? GO:0030246 ... P02872 33135679 MOAD: Kd=495uM
    564336 6v95:B (1.78) BS02 MN ? GO:0030246 ... P02872 33135679
    564337 6v95:B (1.78) BS03 CA ? GO:0030246 ... P02872 33135679
    564338 6v95:C (1.78) BS01 QSG ? GO:0030246 ... P02872 33135679 MOAD: Kd=495uM
    564339 6v95:C (1.78) BS02 MN ? GO:0030246 ... P02872 33135679
    564340 6v95:C (1.78) BS03 CA ? GO:0030246 ... P02872 33135679
    564341 6v95:D (1.78) BS01 QSG ? GO:0030246 ... P02872 33135679 MOAD: Kd=495uM
    564342 6v95:D (1.78) BS02 MN ? GO:0030246 ... P02872 33135679
    564343 6v95:D (1.78) BS03 CA ? GO:0030246 ... P02872 33135679
    564344 6v98:A (1.8) BS01 CA ? GO:0003674 ... Q9KMN9 32094588
    564345 6v98:A (1.8) BS02 CA ? GO:0003674 ... Q9KMN9 32094588
    564346 6v9c:A (1.9) BS01 QS7 2.7.10.1 GO:0004672 ... P22455 33062171 BindingDB: IC50=<100nM
    564347 6v9e:A (2.4) BS01 MN ? GO:0003723 ... C6H0Y9 36603507
    564348 6v9e:A (2.4) BS02 MN ? GO:0003723 ... C6H0Y9 36603507
    564349 6v9e:A (2.4) BS03 QQP ? GO:0003723 ... C6H0Y9 36603507
    564350 6v9e:A (2.4) BS04 Y24 ? GO:0003723 ... C6H0Y9 36603507
    564351 6v9f:A (1.849) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 32673492
    564352 6v9f:A (1.849) BS02 MG 3.6.5.2 GO:0003924 ... P01112 32673492
    564353 6v9f:B (1.849) BS01 QTS ? GO:0005085 ... Q07889 32673492 BindingDB: Kd=350000nM
    564354 6v9i:R (5.2) BS01 ZN ? GO:0004842 ... Q9WTZ1 32513959
    564355 6v9i:R (5.2) BS02 ZN ? GO:0004842 ... Q9WTZ1 32513959
    564356 6v9i:R (5.2) BS03 ZN ? GO:0004842 ... Q9WTZ1 32513959
    564357 6v9j:A (1.76) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 32673492
    564358 6v9j:A (1.76) BS02 MG 3.6.5.2 GO:0003924 ... P01112 32673492
    564359 6v9j:B (1.76) BS01 QTM ? GO:0005085 ... Q07889 32673492 BindingDB: EC50=1320nM, Kd=4510nM
    564360 6v9k:A (1.9) BS01 MG 2.7.3.9 GO:0003824 ... P08839 32504625
    564361 6v9k:B (1.9) BS01 MG 2.7.3.9 GO:0003824 ... P08839 32504625
    564362 6v9l:A (1.698) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 32673492
    564363 6v9l:A (1.698) BS02 MG 3.6.5.2 GO:0003924 ... P01112 32673492
    564364 6v9l:B (1.698) BS01 QTJ ? GO:0005085 ... Q07889 32673492 BindingDB: Kd=74600nM
    564365 6v9m:A (1.648) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 32673492
    564366 6v9m:A (1.648) BS02 MG 3.6.5.2 GO:0003924 ... P01112 32673492
    564367 6v9m:B (1.648) BS01 QTG ? GO:0005085 ... Q07889 32673492 BindingDB: Kd=>2000000nM
    564368 6v9n:A (1.648) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 32673492
    564369 6v9n:A (1.648) BS02 MG 3.6.5.2 GO:0003924 ... P01112 32673492
    564370 6v9n:B (1.648) BS01 QTD ? GO:0005085 ... Q07889 32673492 BindingDB: Kd=600000nM
    564371 6v9o:A (1.799) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 N/A
    564372 6v9o:A (1.799) BS02 MG 3.6.5.2 GO:0003924 ... P01112 N/A
    564373 6v9o:A (1.799) BS03 QTA 3.6.5.2 GO:0003924 ... P01112 N/A
    564374 6v9o:B (1.799) BS01 QTA ? GO:0005085 ... Q07889 N/A
    564375 6v9o:B (1.799) BS02 QTA ? GO:0005085 ... Q07889 N/A
    564376 6v9p:A (1.93) BS01 ZN N/A N/A N/A 31925391
    564377 6v9p:A (1.93) BS02 ZN N/A N/A N/A 31925391
    564378 6v9q:A (2.9) BS01 rna N/A N/A N/A 31925391
    564379 6v9q:B (2.9) BS01 rna N/A N/A N/A 31925391
    564380 6v9q:C (2.9) BS01 rna N/A N/A N/A 31925391
    564381 6v9q:D (2.9) BS01 rna N/A N/A N/A 31925391
    564382 6v9q:E (2.9) BS01 rna N/A N/A N/A 31925391
    564383 6v9q:F (2.9) BS01 rna N/A N/A N/A 31925391
    564384 6v9q:G (2.9) BS01 rna N/A N/A N/A 31925391
    564385 6v9q:H (2.9) BS01 rna N/A GO:0004519 ... N/A 31925391
    564386 6v9q:I (2.9) BS01 ZN N/A N/A N/A 31925391
    564387 6v9q:I (2.9) BS02 ZN N/A N/A N/A 31925391
    564388 6v9q:J (2.9) BS01 ZN N/A N/A N/A 31925391
    564389 6v9s:A (3.5) BS01 JHC ? GO:0004930 ... O43613
    Q9V2J8
    32669442
    564390 6v9t:AAA (2.154) BS01 36X ? N/A Q9H7E2 36114190
    564391 6v9t:BBB (2.154) BS01 36X ? N/A Q9H7E2 36114190
    564392 6v9u:A (2.65) BS01 QSM ? GO:0002224 ... Q9NR97 32944143
    564393 6v9u:A (2.65) BS02 QSM ? GO:0002224 ... Q9NR97 32944143
    564394 6v9u:B (2.65) BS01 QSM ? GO:0002224 ... Q9NR97 32944143
    564395 6v9u:B (2.65) BS02 QSM ? GO:0002224 ... Q9NR97 32944143
    564396 6v9v:A (2.6) BS01 QT4 ? GO:0005216 ... O75762 32641835
    564397 6v9v:A (2.6) BS02 CA ? GO:0005216 ... O75762 32641835
    564398 6v9v:B (2.6) BS01 QT4 ? GO:0005216 ... O75762 32641835
    564399 6v9v:B (2.6) BS02 CA ? GO:0005216 ... O75762 32641835
    564400 6v9v:C (2.6) BS01 QT4 ? GO:0005216 ... O75762 32641835

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).