SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    564801 6vdr:B (1.87) BS02 BML ? GO:0004601 ... Q9NAV7 N/A
    564802 6vds:A (1.97) BS01 FDE ? GO:0004601 ... Q9NAV7 N/A
    564803 6vds:A (1.97) BS02 MWJ ? GO:0004601 ... Q9NAV7 N/A
    564804 6vds:B (1.97) BS01 FDE ? GO:0004601 ... Q9NAV7 N/A
    564805 6vds:B (1.97) BS02 MWJ ? GO:0004601 ... Q9NAV7 N/A
    564806 6vdt:A (1.978) BS01 FDE ? GO:0004601 ... Q9NAV7 N/A
    564807 6vdt:A (1.978) BS02 NPO ? GO:0004601 ... Q9NAV7 N/A
    564808 6vdt:B (1.978) BS01 FDE ? GO:0004601 ... Q9NAV7 N/A
    564809 6vdu:A (1.98) BS01 FDE ? GO:0004601 ... Q9NAV7 N/A
    564810 6vdu:A (1.98) BS02 T6C ? GO:0004601 ... Q9NAV7 N/A
    564811 6vdu:B (1.98) BS01 FDE ? GO:0004601 ... Q9NAV7 N/A
    564812 6vdu:B (1.98) BS02 T6C ? GO:0004601 ... Q9NAV7 N/A
    564813 6vdv:A (1.88) BS01 MNR ? GO:0004601 ... Q9NAV7 N/A
    564814 6vdv:A (1.88) BS02 BML ? GO:0004601 ... Q9NAV7 N/A
    564815 6vdv:B (1.88) BS01 MNR ? GO:0004601 ... Q9NAV7 N/A
    564816 6vdv:B (1.88) BS02 BML ? GO:0004601 ... Q9NAV7 N/A
    564817 6vdw:A (1.5) BS01 MNR ? GO:0004601 ... Q9NAV7 N/A
    564818 6vdw:A (1.5) BS02 NPO ? GO:0004601 ... Q9NAV7 N/A
    564819 6vdw:B (1.5) BS01 MNR ? GO:0004601 ... Q9NAV7 N/A
    564820 6vdw:B (1.5) BS02 NPO ? GO:0004601 ... Q9NAV7 N/A
    564821 6vdx:A (1.53) BS01 T6C ? GO:0004601 ... Q9NAV7 N/A
    564822 6vdx:A (1.53) BS02 MNR ? GO:0004601 ... Q9NAV7 N/A
    564823 6vdx:B (1.53) BS01 T6C ? GO:0004601 ... Q9NAV7 N/A
    564824 6vdx:B (1.53) BS02 MNR ? GO:0004601 ... Q9NAV7 N/A
    564825 6vdy:A (1.7) BS01 HEM ? GO:0004601 ... Q9NAV7 N/A
    564826 6vdy:A (1.7) BS02 T6C ? GO:0004601 ... Q9NAV7 N/A
    564827 6vdy:B (1.7) BS01 HEM ? GO:0004601 ... Q9NAV7 N/A
    564828 6vdy:B (1.7) BS02 T6C ? GO:0004601 ... Q9NAV7 N/A
    564829 6vdz:A (2.95) BS01 HEC 1.11.2.5 GO:0016491 ... B0CN28 34163669
    564830 6ve0:A (3.15) BS01 HEC 1.11.2.5 GO:0016491 ... B0CN28 34163669
    564831 6ve1:B (2.1) BS01 MG 3.2.1.96 GO:0004553 ... P04067 33201877
    564832 6ve1:C (2.1) BS01 MG 3.2.1.96 GO:0004553 ... P04067 33201877
    564833 6ve1:C (2.1) BS02 MG 3.2.1.96 GO:0004553 ... P04067 33201877
    564834 6ve1:D (2.1) BS01 MG 3.2.1.96 GO:0004553 ... P04067 33201877
    564835 6ve5:A (2.0) BS01 peptide ? GO:0000122 ... Q9UI95 34174285
    564836 6ve7:0 (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564837 6ve7:1 (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564838 6ve7:4 (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564839 6ve7:4 (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564840 6ve7:5 (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564841 6ve7:6 (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564842 6ve7:7 (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564843 6ve7:8 (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564844 6ve7:8 (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564845 6ve7:9 (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564846 6ve7:9 (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564847 6ve7:D (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564848 6ve7:E (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564849 6ve7:F (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564850 6ve7:G (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564851 6ve7:I (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564852 6ve7:J (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564853 6ve7:J (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564854 6ve7:K (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564855 6ve7:L (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564856 6ve7:M (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564857 6ve7:N (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564858 6ve7:O (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564859 6ve7:P (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564860 6ve7:Q (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564861 6ve7:R (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564862 6ve7:S (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564863 6ve7:T (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564864 6ve7:U (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564865 6ve7:V (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564866 6ve7:V (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564867 6ve7:X (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564868 6ve7:Y (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564869 6ve7:Z (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564870 6ve7:a (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564871 6ve7:a (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564872 6ve7:b (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564873 6ve7:b (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564874 6ve7:e (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564875 6ve7:f (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564876 6ve7:h (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564877 6ve7:i (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564878 6ve7:i (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564879 6ve7:j (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564880 6ve7:j (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564881 6ve7:k (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564882 6ve7:m (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564883 6ve7:o (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564884 6ve7:p (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564885 6ve7:p (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564886 6ve7:q (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564887 6ve7:q (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564888 6ve7:r (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564889 6ve7:r (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564890 6ve7:s (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564891 6ve7:s (3.6) BS02 GDP 3.6.5.- GO:0005200 ... P09204 31951202
    564892 6ve7:t (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564893 6ve7:t (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564894 6ve7:u (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564895 6ve7:u (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564896 6ve7:v (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564897 6ve7:v (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564898 6ve7:w (3.6) BS01 GDP ? GO:0003924 ... P04690 31951202
    564899 6ve7:w (3.6) BS02 TA1 ? GO:0003924 ... P04690 31951202
    564900 6ve7:y (3.6) BS01 GTP 3.6.5.- GO:0005200 ... P09204 31951202
    564901 6ve8:A (1.75) BS01 MET ? GO:0015276 ... Q93YT1 33027636
    564902 6vea:A (1.58) BS01 GLY ? GO:0015276 ... Q93YT1 33027636
    564903 6veb:A (2.55) BS01 SAH 1.3.1.76
    2.1.1.107
    4.99.1.4
    GO:0004325 ... P25924 32054833
    564904 6veb:A (2.55) BS02 NAD 1.3.1.76
    2.1.1.107
    4.99.1.4
    GO:0004325 ... P25924 32054833
    564905 6veb:A (2.55) BS03 PQ2 1.3.1.76
    2.1.1.107
    4.99.1.4
    GO:0004325 ... P25924 32054833
    564906 6veb:B (2.55) BS01 SAH 1.3.1.76
    2.1.1.107
    4.99.1.4
    GO:0004325 ... P25924 32054833
    564907 6veb:B (2.55) BS02 PQ2 1.3.1.76
    2.1.1.107
    4.99.1.4
    GO:0004325 ... P25924 32054833
    564908 6vec:A (3.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 32509377
    564909 6vec:B (3.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 32509377
    564910 6vec:C (3.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 32509377
    564911 6vec:D (3.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 32509377
    564912 6vec:E (3.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 32509377
    564913 6vec:F (3.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 32509377
    564914 6vec:G (3.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 32509377
    564915 6vec:H (3.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 32509377
    564916 6vec:I (3.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 32509377
    564917 6vec:J (3.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 32509377
    564918 6vec:K (3.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 32509377
    564919 6vef:A (4.08) BS01 AMP 1.2.4.2 GO:0000166 ... P0AFG3 N/A
    564920 6vef:A (4.08) BS02 OAA 1.2.4.2 GO:0000166 ... P0AFG3 N/A
    564921 6vef:A (4.08) BS03 OAA 1.2.4.2 GO:0000166 ... P0AFG3 N/A
    564922 6vef:B (4.08) BS01 OAA 1.2.4.2 GO:0000166 ... P0AFG3 N/A
    564923 6vef:B (4.08) BS02 OAA 1.2.4.2 GO:0000166 ... P0AFG3 N/A
    564924 6vef:B (4.08) BS03 AMP 1.2.4.2 GO:0000166 ... P0AFG3 N/A
    564925 6vei:A (2.1) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 32071674
    564926 6vei:A (2.1) BS02 33O 1.1.1.42 GO:0000287 ... O75874 32071674
    564927 6vei:A (2.1) BS03 NDP 1.1.1.42 GO:0000287 ... O75874 32071674
    564928 6vei:A (2.1) BS04 9UO 1.1.1.42 GO:0000287 ... O75874 32071674 BindingDB: IC50=0.040000nM
    564929 6vei:B (2.1) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 32071674
    564930 6vei:B (2.1) BS02 9UO 1.1.1.42 GO:0000287 ... O75874 32071674 BindingDB: IC50=0.040000nM
    564931 6vel:C (2.65) BS01 CA ? GO:0000794 ... P12830
    Q12306
    36157596
    564932 6vel:C (2.65) BS02 CA ? GO:0000794 ... P12830
    Q12306
    36157596
    564933 6vel:C (2.65) BS03 CA ? GO:0000794 ... P12830
    Q12306
    36157596
    564934 6ven:A (3.37) BS01 dna ? GO:0000786 ... P84233 31922488
    564935 6ven:A (3.37) BS02 dna ? GO:0000786 ... P84233 31922488
    564936 6ven:B (3.37) BS01 dna ? GO:0000786 ... P62799 31922488
    564937 6ven:B (3.37) BS02 dna ? GO:0000786 ... P62799 31922488
    564938 6ven:C (3.37) BS01 dna ? GO:0000786 ... P06897 31922488
    564939 6ven:C (3.37) BS02 dna ? GO:0000786 ... P06897 31922488
    564940 6ven:D (3.37) BS01 dna ? GO:0000786 ... P02281 31922488
    564941 6ven:D (3.37) BS02 dna ? GO:0000786 ... P02281 31922488
    564942 6ven:E (3.37) BS01 dna ? GO:0000786 ... P84233 31922488
    564943 6ven:E (3.37) BS02 dna ? GO:0000786 ... P84233 31922488
    564944 6ven:F (3.37) BS01 dna ? GO:0000786 ... P62799 31922488
    564945 6ven:G (3.37) BS01 dna ? GO:0000786 ... P06897 31922488
    564946 6ven:G (3.37) BS02 dna ? GO:0000786 ... P06897 31922488
    564947 6ven:H (3.37) BS01 dna ? GO:0000786 ... P02281 31922488
    564948 6ven:H (3.37) BS02 dna ? GO:0000786 ... P02281 31922488
    564949 6ven:N (3.37) BS01 ZN 2.1.1.354 GO:0042800 ... P38827 31922488
    564950 6ven:N (3.37) BS02 SAM 2.1.1.354 GO:0042800 ... P38827 31922488
    564951 6ven:O (3.37) BS01 peptide ? GO:0000723 ... P43132 31922488
    564952 6ven:P (3.37) BS01 peptide ? GO:0000781 ... Q03323 31922488
    564953 6veo:A (2.4) BS01 YD4 ? N/A Q9ULI0 33084328
    564954 6vep:E (2.9) BS01 peptide 2.7.10.1 N/A P06213 32483339
    564955 6vep:E (2.9) BS02 peptide 2.7.10.1 N/A P06213 32483339
    564956 6vep:K (2.9) BS01 peptide 2.7.10.1 N/A P06213 32483339
    564957 6vep:K (2.9) BS02 peptide 2.7.10.1 N/A P06213 32483339
    564958 6vep:Q (2.9) BS01 peptide 2.7.10.1 N/A P06213 32483339
    564959 6vep:Q (2.9) BS02 peptide 2.7.10.1 N/A P06213 32483339
    564960 6vep:W (2.9) BS01 peptide 2.7.10.1 N/A P06213 32483339
    564961 6vep:W (2.9) BS02 peptide 2.7.10.1 N/A P06213 32483339
    564962 6veq:E (3.25) BS01 peptide 2.7.10.1 N/A P06213 32483339
    564963 6veq:E (3.25) BS02 peptide 2.7.10.1 N/A P06213 32483339
    564964 6veq:K (3.25) BS01 peptide 2.7.10.1 N/A P06213 32483339
    564965 6veq:K (3.25) BS02 peptide 2.7.10.1 N/A P06213 32483339
    564966 6veq:K (3.25) BS03 peptide 2.7.10.1 N/A P06213 32483339
    564967 6vez:A (1.875) BS01 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564968 6vez:A (1.875) BS02 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564969 6vez:A (1.875) BS03 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564970 6vez:A (1.875) BS04 8GT 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564971 6vez:A (1.875) BS05 CA 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564972 6vez:A (1.875) BS06 CA 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564973 6vf0:A (1.58) BS01 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564974 6vf0:A (1.58) BS02 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564975 6vf0:A (1.58) BS03 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564976 6vf0:A (1.58) BS04 MG 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564977 6vf0:A (1.58) BS05 MG 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564978 6vf0:A (1.58) BS06 8GT 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564979 6vf1:A (1.68) BS01 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564980 6vf1:A (1.68) BS02 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564981 6vf1:A (1.68) BS03 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564982 6vf1:A (1.68) BS04 MG 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564983 6vf1:A (1.68) BS05 MG 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564984 6vf1:A (1.68) BS06 GOA 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564985 6vf2:A (1.6) BS01 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564986 6vf2:A (1.6) BS02 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564987 6vf2:A (1.6) BS03 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564988 6vf2:A (1.6) BS04 MG 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564989 6vf3:A (1.521) BS01 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564990 6vf3:A (1.521) BS02 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564991 6vf3:A (1.521) BS03 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564992 6vf3:A (1.521) BS04 8GT 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564993 6vf3:A (1.521) BS05 MN 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564994 6vf3:A (1.521) BS06 MN 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564995 6vf3:A (1.521) BS07 MN 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564996 6vf4:A (1.75) BS01 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564997 6vf4:A (1.75) BS02 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564998 6vf4:A (1.75) BS03 dna 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    564999 6vf4:A (1.75) BS04 MN 2.7.7.7 GO:0003677 ... Q9NP87 N/A
    565000 6vf4:A (1.75) BS05 MN 2.7.7.7 GO:0003677 ... Q9NP87 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).