SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    56401 1uxv:A (2.35) BS01 NAP 1.2.1.90 GO:0008886 ... O57693 15288789
    56402 1uxv:A (2.35) BS02 AMP 1.2.1.90 GO:0008886 ... O57693 15288789
    56403 1uxw:A (1.71) BS01 peptide ? N/A P01889 15537660
    56404 1uxx:X (1.6) BS01 XYP 3.2.1.8 GO:0030246 ... O52780 15010454
    56405 1uxx:X (1.6) BS02 XYP 3.2.1.8 GO:0030246 ... O52780 15010454
    56406 1uxx:X (1.6) BS03 XYP 3.2.1.8 GO:0030246 ... O52780 15010454
    56407 1uxx:X (1.6) BS04 XYP 3.2.1.8 GO:0030246 ... O52780 15010454
    56408 1uxx:X (1.6) BS05 XYP 3.2.1.8 GO:0030246 ... O52780 15010454
    56409 1uxx:X (1.6) BS06 CA 3.2.1.8 GO:0030246 ... O52780 15010454
    56410 1uxy:A (1.8) BS01 FAD 1.3.1.98 GO:0005737 ... P08373 9020778
    56411 1uxy:A (1.8) BS02 EPU 1.3.1.98 GO:0005737 ... P08373 9020778
    56412 1uy0:A (1.65) BS01 BGC ? GO:0030246 ... O07653 15010454
    56413 1uy0:A (1.65) BS02 BGC ? GO:0030246 ... O07653 15010454
    56414 1uy0:A (1.65) BS03 CA ? GO:0030246 ... O07653 15010454
    56415 1uy0:A (1.65) BS04 CA ? GO:0030246 ... O07653 15010454
    56416 1uy0:B (1.65) BS01 BGC ? GO:0030246 ... O07653 15010454
    56417 1uy0:B (1.65) BS02 BGC ? GO:0030246 ... O07653 15010454
    56418 1uy0:B (1.65) BS03 BGC ? GO:0030246 ... O07653 15010454
    56419 1uy0:B (1.65) BS04 CA ? GO:0030246 ... O07653 15010454
    56420 1uy0:B (1.65) BS05 CA ? GO:0030246 ... O07653 15010454
    56421 1uy1:A (1.8) BS01 CA 3.2.1.8 GO:0030246 ... Q8GJ44 15223327
    56422 1uy2:A (1.7) BS01 XYP 3.2.1.8 GO:0030246 ... Q8GJ44 15223327
    56423 1uy2:A (1.7) BS02 CA 3.2.1.8 GO:0030246 ... Q8GJ44 15223327
    56424 1uy3:A (1.89) BS01 XYP 3.2.1.8 GO:0030246 ... Q8GJ44 15223327
    56425 1uy3:A (1.89) BS02 XYP 3.2.1.8 GO:0030246 ... Q8GJ44 15223327
    56426 1uy3:A (1.89) BS03 XYP 3.2.1.8 GO:0030246 ... Q8GJ44 15223327
    56427 1uy3:A (1.89) BS04 CA 3.2.1.8 GO:0030246 ... Q8GJ44 15223327
    56428 1uy4:A (1.69) BS01 XYP 3.2.1.8 GO:0030246 ... Q8GJ44 15223327
    56429 1uy4:A (1.69) BS02 XYP 3.2.1.8 GO:0030246 ... Q8GJ44 15223327
    56430 1uy4:A (1.69) BS03 XYP 3.2.1.8 GO:0030246 ... Q8GJ44 15223327
    56431 1uy4:A (1.69) BS04 CA 3.2.1.8 GO:0030246 ... Q8GJ44 15223327
    56432 1uy6:A (1.9) BS01 PU3 3.6.4.10 GO:0005524 ... P07900 15217611 MOAD: ic50>200uM
    56433 1uy7:A (1.9) BS01 PU4 3.6.4.10 GO:0005524 ... P07900 15217611 MOAD: ic50>200uM
    56434 1uy8:A (1.98) BS01 PU5 3.6.4.10 GO:0005524 ... P07900 15217611 MOAD: ic50=75uM
    56435 1uy9:A (2.0) BS01 PU6 3.6.4.10 GO:0005524 ... P07900 15217611 MOAD: ic50=15.3uM
    56436 1uyc:A (2.0) BS01 PU7 3.6.4.10 GO:0005524 ... P07900 15217611 MOAD: ic50=41uM
    56437 1uyd:A (2.2) BS01 PU8 3.6.4.10 GO:0005524 ... P07900 15217611 MOAD: ic50>200uM
    56438 1uye:A (2.0) BS01 PU9 3.6.4.10 GO:0005524 ... P07900 15217611 MOAD: ic50>200uM
    56439 1uyf:A (2.0) BS01 PU1 3.6.4.10 GO:0005524 ... P07900 15217611 MOAD: ic50=30uM
    BindingDB: EC50=1200nM
    56440 1uyg:A (2.0) BS01 PU2 3.6.4.10 GO:0005524 ... P07900 15217611 MOAD: ic50=53.5uM
    56441 1uyh:A (2.2) BS01 PU0 3.6.4.10 GO:0005524 ... P07900 15217611 MOAD: ic50=14.3uM
    56442 1uyi:A (2.2) BS01 PUZ 3.6.4.10 GO:0005524 ... P07900 15217611 MOAD: ic50=4.1uM
    56443 1uyk:A (2.2) BS01 PUX 3.6.4.10 GO:0005524 ... P07900 15217611 MOAD: ic50=17.1uM
    56444 1uym:A (2.45) BS01 PU3 ? GO:0005524 ... P08238 15217611 BindingDB: IC50=>200000nM, EC50=3200nM
    56445 1uyq:A (2.2) BS01 G2F 3.2.1.21 GO:0004553 ... P22073 N/A
    56446 1uyq:A (2.2) BS02 NFG 3.2.1.21 GO:0004553 ... P22073 N/A
    56447 1uyr:A (2.5) BS01 D1L 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 15079078
    56448 1uyr:A (2.5) BS02 D1L 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 15079078
    56449 1uyr:B (2.5) BS01 D1L 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 15079078
    56450 1uyr:B (2.5) BS02 D1L 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 15079078
    56451 1uys:A (2.8) BS01 H1L 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 15079078
    56452 1uys:B (2.8) BS01 H1L 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 15079078
    56453 1uys:B (2.8) BS02 H1L 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 15079078
    56454 1uys:C (2.8) BS01 H1L 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 15079078
    56455 1uys:C (2.8) BS02 H1L 6.3.4.14
    6.4.1.2
    GO:0003989 ... Q00955 15079078
    56456 1uyu:A (2.0) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 15219983
    56457 1uyu:A (2.0) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 15219983
    56458 1uyu:A (2.0) BS03 XE 1.14.15.1 GO:0004497 ... P00183 15219983
    56459 1uyu:A (2.0) BS04 XE 1.14.15.1 GO:0004497 ... P00183 15219983
    56460 1uyu:A (2.0) BS05 XE 1.14.15.1 GO:0004497 ... P00183 15219983
    56461 1uyu:A (2.0) BS06 XE 1.14.15.1 GO:0004497 ... P00183 15219983
    56462 1uyu:B (2.0) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 15219983
    56463 1uyu:B (2.0) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 15219983
    56464 1uyu:B (2.0) BS03 XE 1.14.15.1 GO:0004497 ... P00183 15219983
    56465 1uyu:B (2.0) BS04 XE 1.14.15.1 GO:0004497 ... P00183 15219983
    56466 1uyx:A (1.47) BS01 BGC ? GO:0030246 ... O07653 15010454
    56467 1uyx:A (1.47) BS02 BGC ? GO:0030246 ... O07653 15010454
    56468 1uyx:A (1.47) BS03 BGC ? GO:0030246 ... O07653 15010454
    56469 1uyx:A (1.47) BS04 CA ? GO:0030246 ... O07653 15010454
    56470 1uyx:A (1.47) BS05 CA ? GO:0030246 ... O07653 15010454
    56471 1uyx:B (1.47) BS01 BGC ? GO:0030246 ... O07653 15010454
    56472 1uyx:B (1.47) BS02 BGC ? GO:0030246 ... O07653 15010454
    56473 1uyx:B (1.47) BS03 BGC ? GO:0030246 ... O07653 15010454
    56474 1uyx:B (1.47) BS04 CA ? GO:0030246 ... O07653 15010454
    56475 1uyx:B (1.47) BS05 CA ? GO:0030246 ... O07653 15010454
    56476 1uyy:A (1.47) BS01 BGC ? GO:0030246 ... O07653 15010454
    56477 1uyy:A (1.47) BS02 BGC ? GO:0030246 ... O07653 15010454
    56478 1uyy:A (1.47) BS03 CA ? GO:0030246 ... O07653 15010454
    56479 1uyy:A (1.47) BS04 CA ? GO:0030246 ... O07653 15010454
    56480 1uyy:B (1.47) BS01 BGC ? GO:0030246 ... O07653 15010454
    56481 1uyy:B (1.47) BS02 BGC ? GO:0030246 ... O07653 15010454
    56482 1uyy:B (1.47) BS03 BGC ? GO:0030246 ... O07653 15010454
    56483 1uyy:B (1.47) BS04 CA ? GO:0030246 ... O07653 15010454
    56484 1uyy:B (1.47) BS05 CA ? GO:0030246 ... O07653 15010454
    56485 1uyz:A (1.6) BS01 XYP ? GO:0030246 ... O07653 15010454
    56486 1uyz:A (1.6) BS02 CA ? GO:0030246 ... O07653 15010454
    56487 1uyz:A (1.6) BS03 CA ? GO:0030246 ... O07653 15010454
    56488 1uyz:B (1.6) BS01 XYP ? GO:0030246 ... O07653 15010454
    56489 1uyz:B (1.6) BS02 CA ? GO:0030246 ... O07653 15010454
    56490 1uyz:B (1.6) BS03 CA ? GO:0030246 ... O07653 15010454
    56491 1uz0:A (2.0) BS01 BGC ? GO:0030246 ... O07653 15010454
    56492 1uz0:A (2.0) BS02 BGC ? GO:0030246 ... O07653 15010454
    56493 1uz0:A (2.0) BS03 BGC ? GO:0030246 ... O07653 15010454
    56494 1uz0:A (2.0) BS04 CA ? GO:0030246 ... O07653 15010454
    56495 1uz0:A (2.0) BS05 CA ? GO:0030246 ... O07653 15010454
    56496 1uz1:A (2.0) BS01 IFL 3.2.1.21 GO:0004553 ... Q08638 15515081 MOAD: Ki=130nM
    56497 1uz1:B (2.0) BS01 IFL 3.2.1.21 GO:0004553 ... Q08638 15515081 MOAD: Ki=130nM
    56498 1uz4:A (1.71) BS01 IFL ? GO:0000272 ... Q6QT42 15515081 MOAD: Ki=400uM
    56499 1uz8:A (1.8) BS01 MAG N/A N/A N/A 15242599
    56500 1uz8:A (1.8) BS02 FUC N/A N/A N/A 15242599
    56501 1uz8:B (1.8) BS01 GAL N/A GO:0003823 ... P01811 15242599
    56502 1uz8:H (1.8) BS01 GAL N/A GO:0003823 ... P01811 15242599
    56503 1uz8:L (1.8) BS01 MAG N/A N/A N/A 15242599
    56504 1uz8:L (1.8) BS02 FUC N/A N/A N/A 15242599
    56505 1uzd:A (2.4) BS01 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56506 1uzd:A (2.4) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56507 1uzd:A (2.4) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56508 1uzd:B (2.4) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56509 1uzd:B (2.4) BS02 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56510 1uzd:B (2.4) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56511 1uzd:E (2.4) BS01 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56512 1uzd:E (2.4) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56513 1uzd:E (2.4) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56514 1uzd:H (2.4) BS01 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56515 1uzd:H (2.4) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56516 1uzd:H (2.4) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56517 1uzd:K (2.4) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56518 1uzd:K (2.4) BS02 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56519 1uzd:K (2.4) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56520 1uzd:O (2.4) BS01 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56521 1uzd:O (2.4) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56522 1uzd:O (2.4) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56523 1uzd:R (2.4) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56524 1uzd:R (2.4) BS02 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56525 1uzd:R (2.4) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56526 1uzd:V (2.4) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56527 1uzd:V (2.4) BS02 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56528 1uzd:V (2.4) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56529 1uze:A (1.82) BS01 GLY 3.4.15.1 GO:0006508 ... P12821 15236580
    56530 1uze:A (1.82) BS02 ZN 3.4.15.1 GO:0006508 ... P12821 15236580
    56531 1uze:A (1.82) BS03 CL 3.4.15.1 GO:0006508 ... P12821 15236580
    56532 1uze:A (1.82) BS04 CL 3.4.15.1 GO:0006508 ... P12821 15236580
    56533 1uze:A (1.82) BS05 EAL 3.4.15.1 GO:0006508 ... P12821 15236580 BindingDB: IC50=1.2nM
    56534 1uzf:A (2.0) BS01 ZN 3.4.15.1 GO:0006508 ... P12821 15236580
    56535 1uzf:A (2.0) BS02 MCO 3.4.15.1 GO:0006508 ... P12821 15236580
    56536 1uzf:A (2.0) BS03 CL 3.4.15.1 GO:0006508 ... P12821 15236580
    56537 1uzf:A (2.0) BS04 CL 3.4.15.1 GO:0006508 ... P12821 15236580
    56538 1uzh:A (2.2) BS01 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56539 1uzh:A (2.2) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56540 1uzh:A (2.2) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56541 1uzh:B (2.2) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56542 1uzh:B (2.2) BS02 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56543 1uzh:B (2.2) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56544 1uzh:E (2.2) BS01 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56545 1uzh:E (2.2) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56546 1uzh:E (2.2) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56547 1uzh:H (2.2) BS01 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56548 1uzh:H (2.2) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56549 1uzh:H (2.2) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56550 1uzh:K (2.2) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56551 1uzh:K (2.2) BS02 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56552 1uzh:K (2.2) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56553 1uzh:O (2.2) BS01 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56554 1uzh:O (2.2) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56555 1uzh:O (2.2) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56556 1uzh:R (2.2) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56557 1uzh:R (2.2) BS02 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56558 1uzh:R (2.2) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56559 1uzh:V (2.2) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56560 1uzh:V (2.2) BS02 MG 4.1.1.39 GO:0000287 ... P00877 16026157
    56561 1uzh:V (2.2) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 16026157
    56562 1uzi:A (1.89) BS01 V4O 2.4.2.- GO:0005576 ... P15879 15272191
    56563 1uzi:B (1.89) BS01 V4O 2.4.2.- GO:0005576 ... P15879 15272191
    56564 1uzj:A (2.25) BS01 CA ? GO:0005509 ... P35555 15062093
    56565 1uzj:A (2.25) BS02 CA ? GO:0005509 ... P35555 15062093
    56566 1uzj:B (2.25) BS01 CA ? GO:0005509 ... P35555 15062093
    56567 1uzj:B (2.25) BS02 CA ? GO:0005509 ... P35555 15062093
    56568 1uzj:C (2.25) BS01 CA ? GO:0005509 ... P35555 15062093
    56569 1uzj:C (2.25) BS02 CA ? GO:0005509 ... P35555 15062093
    56570 1uzk:A (1.35) BS01 CA ? GO:0005509 ... P35555 15062093
    56571 1uzn:A (1.91) BS01 NAP 1.1.1.100
    1.1.1.36
    GO:0004316 ... P9WGT3 12079383 MOAD: Kd=11.2uM
    56572 1uzr:A (2.2) BS01 FE 1.17.4.1 GO:0004748 ... P9WH71 15225619
    56573 1uzr:A (2.2) BS02 FE 1.17.4.1 GO:0004748 ... P9WH71 15225619
    56574 1uzr:B (2.2) BS01 FE 1.17.4.1 GO:0004748 ... P9WH71 15225619
    56575 1uzr:B (2.2) BS02 FE 1.17.4.1 GO:0004748 ... P9WH71 15225619
    56576 1uzr:C (2.2) BS01 FE 1.17.4.1 GO:0004748 ... P9WH71 15225619
    56577 1uzr:C (2.2) BS02 FE 1.17.4.1 GO:0004748 ... P9WH71 15225619
    56578 1uzu:A (2.3) BS01 PLP 2.4.1.1 GO:0004645 ... P00489 15153119
    56579 1uzu:A (2.3) BS02 INR 2.4.1.1 GO:0004645 ... P00489 15153119 MOAD: Ki=13.8uM
    56580 1uzv:A (1.0) BS01 CA ? GO:0030246 ... Q9HYN5 15573375
    56581 1uzv:A (1.0) BS02 CA ? GO:0030246 ... Q9HYN5 15573375
    56582 1uzv:A (1.0) BS03 FUC ? GO:0030246 ... Q9HYN5 15573375 MOAD: Kd=0.6667uM
    56583 1uzv:B (1.0) BS01 CA ? GO:0030246 ... Q9HYN5 15573375
    56584 1uzv:B (1.0) BS02 CA ? GO:0030246 ... Q9HYN5 15573375
    56585 1uzv:B (1.0) BS03 FUC ? GO:0030246 ... Q9HYN5 15573375 MOAD: Kd=0.6667uM
    56586 1uzv:C (1.0) BS01 CA ? GO:0030246 ... Q9HYN5 15573375
    56587 1uzv:C (1.0) BS02 CA ? GO:0030246 ... Q9HYN5 15573375
    56588 1uzv:C (1.0) BS03 FUC ? GO:0030246 ... Q9HYN5 15573375 MOAD: Kd=0.6667uM
    56589 1uzv:D (1.0) BS01 CA ? GO:0030246 ... Q9HYN5 15573375
    56590 1uzv:D (1.0) BS02 CA ? GO:0030246 ... Q9HYN5 15573375
    56591 1uzv:D (1.0) BS03 FUC ? GO:0030246 ... Q9HYN5 15573375 MOAD: Kd=0.6667uM
    56592 1uzw:A (1.3) BS01 FE2 1.21.3.1 GO:0005506 ... P05326 15175003
    56593 1uzw:A (1.3) BS02 CDH 1.21.3.1 GO:0005506 ... P05326 15175003
    56594 1uzy:A (2.0) BS01 BGC ? GO:0030246 ... Q6YD91 15201215
    56595 1uzy:A (2.0) BS02 GAL ? GO:0030246 ... Q6YD91 15201215
    56596 1uzy:A (2.0) BS03 CA ? GO:0030246 ... Q6YD91 15201215
    56597 1uzy:A (2.0) BS04 MN ? GO:0030246 ... Q6YD91 15201215
    56598 1uzy:B (2.0) BS01 BGC ? GO:0030246 ... Q6YD91 15201215
    56599 1uzy:B (2.0) BS02 GAL ? GO:0030246 ... Q6YD91 15201215
    56600 1uzy:B (2.0) BS03 CA ? GO:0030246 ... Q6YD91 15201215

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).