SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    567201 6vsu:A (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567202 6vsu:A (2.25) BS03 ORN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567203 6vsu:B (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567204 6vsu:B (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567205 6vsu:C (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567206 6vsu:C (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567207 6vsu:C (2.25) BS03 ORN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567208 6vsu:D (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567209 6vsu:D (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567210 6vsu:E (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567211 6vsu:E (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567212 6vsu:E (2.25) BS03 ORN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567213 6vsu:F (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567214 6vsu:F (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567215 6vsu:F (2.25) BS03 ORN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567216 6vsu:G (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567217 6vsu:G (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567218 6vsu:H (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567219 6vsu:H (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567220 6vsu:I (2.25) BS01 ORN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567221 6vsu:I (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567222 6vsu:I (2.25) BS03 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567223 6vsu:J (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567224 6vsu:J (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567225 6vsu:K (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567226 6vsu:K (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567227 6vsu:K (2.25) BS03 ORN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567228 6vsu:L (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567229 6vsu:L (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567230 6vsu:M (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567231 6vsu:M (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567232 6vsu:N (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567233 6vsu:N (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567234 6vsu:O (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567235 6vsu:O (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567236 6vsu:P (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567237 6vsu:P (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567238 6vsu:P (2.25) BS03 ORN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567239 6vsu:Q (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567240 6vsu:Q (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567241 6vsu:R (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567242 6vsu:R (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567243 6vsu:S (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567244 6vsu:S (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567245 6vsu:S (2.25) BS03 ORN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567246 6vsu:T (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567247 6vsu:T (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567248 6vsu:U (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567249 6vsu:U (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567250 6vsu:U (2.25) BS03 ORN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567251 6vsu:V (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567252 6vsu:V (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567253 6vsu:V (2.25) BS03 ORN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567254 6vsu:W (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567255 6vsu:W (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567256 6vsu:X (2.25) BS01 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567257 6vsu:X (2.25) BS02 MN 3.5.3.1
    3.5.3.11
    GO:0000050 ... P46637 32754173
    567258 6vsw:A (3.202) BS01 RG7 ? GO:0003677 ... P51449 32336498 BindingDB: Kd=2.0nM, IC50=28nM, EC50=109nM
    567259 6vsw:B (3.202) BS01 RG7 ? GO:0003677 ... P51449 32336498 BindingDB: Kd=2.0nM, IC50=28nM, EC50=109nM
    567260 6vsz:A (2.6) BS01 BMA ? N/A P0DOX5 34232070
    567261 6vsz:A (2.6) BS02 GAL ? N/A P0DOX5 34232070
    567262 6vsz:B (2.6) BS01 BMA ? N/A P0DOX5 34232070
    567263 6vsz:B (2.6) BS02 GAL ? N/A P0DOX5 34232070
    567264 6vt1:A (2.381) BS01 AMP ? GO:0005524 ... D2W2Z5 32315072
    567265 6vt1:B (2.381) BS01 AMP ? GO:0005524 ... D2W2Z5 32315072
    567266 6vt1:C (2.381) BS01 AMP ? GO:0005524 ... D2W2Z5 32315072
    567267 6vt1:D (2.381) BS01 AMP ? GO:0005524 ... D2W2Z5 32315072
    567268 6vt2:A (1.52) BS01 SIA N/A N/A N/A 32820052
    567269 6vt2:A (1.52) BS02 GAL N/A N/A N/A 32820052
    567270 6vt2:A (1.52) BS03 SIA N/A N/A N/A 32820052
    567271 6vt2:A (1.52) BS04 CA N/A N/A N/A 32820052
    567272 6vt2:A (1.52) BS05 CA N/A N/A N/A 32820052
    567273 6vt2:A (1.52) BS06 CA N/A N/A N/A 32820052
    567274 6vt2:A (1.52) BS07 CA N/A N/A N/A 32820052
    567275 6vt2:E (1.52) BS01 GAL N/A N/A N/A 32820052
    567276 6vt2:E (1.52) BS02 SIA N/A N/A N/A 32820052
    567277 6vt2:E (1.52) BS03 SIA N/A N/A N/A 32820052
    567278 6vt2:E (1.52) BS04 CA N/A N/A N/A 32820052
    567279 6vt2:E (1.52) BS05 CA N/A N/A N/A 32820052
    567280 6vt2:E (1.52) BS06 CA N/A N/A N/A 32820052
    567281 6vt2:E (1.52) BS07 CA N/A N/A N/A 32820052
    567282 6vt6:A (1.969) BS01 ATP ? GO:0005524 ... D2W2Z5 32315072
    567283 6vt8:A (1.998) BS01 AMP ? GO:0005524 ... D2W2Z5 32315072
    567284 6vt9:A (2.49) BS01 ATP ? GO:0005524 ... D2W2Z5 32315072
    567285 6vta:A (1.42) BS01 ACO 2.3.1.59 GO:0016746 ... Q52424 34078922
    567286 6vta:A (1.42) BS02 AKN 2.3.1.59 GO:0016746 ... Q52424 34078922
    567287 6vta:B (1.42) BS01 ACO 2.3.1.59 GO:0016746 ... Q52424 34078922
    567288 6vta:B (1.42) BS02 AKN 2.3.1.59 GO:0016746 ... Q52424 34078922
    567289 6vtb:A (1.547) BS01 ATP ? GO:0005524 ... D2W2Z5 32315072
    567290 6vtd:A (2.4) BS01 ATP ? GO:0005524 ... D2W2Z5 32315072
    567291 6vte:A (2.1) BS01 AMP ? GO:0005524 ... D2W2Z5 32315072
    567292 6vtf:A (2.71) BS01 POP ? GO:0005524 ... D2W2Z5 32315072
    567293 6vtf:B (2.71) BS01 POP ? GO:0005524 ... D2W2Z5 32315072
    567294 6vtf:C (2.71) BS01 POP ? GO:0005524 ... D2W2Z5 32315072
    567295 6vtf:D (2.71) BS01 POP ? GO:0005524 ... D2W2Z5 32315072
    567296 6vtj:A (1.95) BS01 PNS ? N/A D3E027 33610550
    567297 6vtn:A (2.25) BS01 RL7 1.3.5.2 GO:0004152 ... Q08210 32248693 MOAD: ic50=0.044uM
    567298 6vtn:A (2.25) BS02 FMN 1.3.5.2 GO:0004152 ... Q08210 32248693
    567299 6vto:A (1.69) BS01 LBL ? GO:0005515 ... P47929 34673030
    567300 6vto:B (1.69) BS01 LBL ? GO:0005515 ... P47929 34673030
    567301 6vtq:A (1.95) BS01 GLC ? GO:0005515 ... P47929 34673030
    567302 6vtq:A (1.95) BS02 GAL ? GO:0005515 ... P47929 34673030
    567303 6vtq:B (1.95) BS01 GLC ? GO:0005515 ... P47929 34673030
    567304 6vtq:B (1.95) BS02 GAL ? GO:0005515 ... P47929 34673030
    567305 6vts:A (1.9) BS01 GLC ? GO:0005515 ... P47929 34673030
    567306 6vts:A (1.9) BS02 GAL ? GO:0005515 ... P47929 34673030
    567307 6vts:B (1.9) BS01 GLC ? GO:0005515 ... P47929 34673030
    567308 6vts:B (1.9) BS02 GAL ? GO:0005515 ... P47929 34673030
    567309 6vtt:H (3.7) BS01 MAN N/A N/A N/A 32268107
    567310 6vtu:H (2.61) BS01 MAN ? N/A S6B291 34019795
    567311 6vtv:A (2.06) BS01 MN 3.5.1.94 GO:0006598 ... P76038 N/A
    567312 6vtv:B (2.06) BS01 MN 3.5.1.94 GO:0006598 ... P76038 N/A
    567313 6vtx:A (2.14) BS01 dna ? N/A O43474 34552088
    567314 6vtx:A (2.14) BS02 dna ? N/A O43474 34552088
    567315 6vtx:A (2.14) BS03 ZN ? N/A O43474 34552088
    567316 6vtx:A (2.14) BS04 ZN ? N/A O43474 34552088
    567317 6vtx:A (2.14) BS05 ZN ? N/A O43474 34552088
    567318 6vty:A (1.78) BS01 RLA 1.3.5.2 GO:0004152 ... Q08210 32248693 MOAD: ic50=0.1uM
    567319 6vty:A (1.78) BS02 FMN 1.3.5.2 GO:0004152 ... Q08210 32248693
    567320 6vty:B (1.78) BS01 RLA 1.3.5.2 GO:0004152 ... Q08210 32248693 MOAD: ic50=0.1uM
    567321 6vty:B (1.78) BS02 FMN 1.3.5.2 GO:0004152 ... Q08210 32248693
    567322 6vty:C (1.78) BS01 RLA 1.3.5.2 GO:0004152 ... Q08210 32248693 MOAD: ic50=0.1uM
    567323 6vty:C (1.78) BS02 FMN 1.3.5.2 GO:0004152 ... Q08210 32248693
    567324 6vty:D (1.78) BS01 RLA 1.3.5.2 GO:0004152 ... Q08210 32248693 MOAD: ic50=0.1uM
    567325 6vty:D (1.78) BS02 FMN 1.3.5.2 GO:0004152 ... Q08210 32248693
    567326 6vu3:0 (3.7) BS01 rna ? GO:0002181 ... P0AG48 32820061
    567327 6vu3:1 (3.7) BS01 rna ? GO:0002181 ... P61175 32820061
    567328 6vu3:2 (3.7) BS01 rna ? GO:0000027 ... P0ADZ0 32820061
    567329 6vu3:3 (3.7) BS01 rna ? GO:0000027 ... P60624 32820061
    567330 6vu3:4 (3.7) BS01 rna ? GO:0000027 ... P68919 32820061
    567331 6vu3:9 (3.7) BS01 rna ? GO:0002181 ... P0A7J3 32820061
    567332 6vu3:AA (3.7) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 32820061
    567333 6vu3:AA (3.7) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 32820061
    567334 6vu3:AA (3.7) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 32820061
    567335 6vu3:AA (3.7) BS04 rna 2.7.7.6 GO:0000345 ... P0A8V2 32820061
    567336 6vu3:AB (3.7) BS01 dna ? GO:0005515 ... P0AFG0 32820061
    567337 6vu3:AE (3.7) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    567338 6vu3:AE (3.7) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    567339 6vu3:AE (3.7) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    567340 6vu3:AE (3.7) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    567341 6vu3:AE (3.7) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    567342 6vu3:AE (3.7) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    567343 6vu3:C (3.7) BS01 rna ? GO:0003735 ... P0A7T7 32820061
    567344 6vu3:E (3.7) BS01 rna ? GO:0000028 ... P0A7U7 32820061
    567345 6vu3:F (3.7) BS01 rna ? GO:0000028 ... P68679 32820061
    567346 6vu3:G (3.7) BS01 rna ? GO:0000028 ... P0A7V0 32820061
    567347 6vu3:I (3.7) BS01 rna ? GO:0003676 ... P0A7V3 32820061
    567348 6vu3:I (3.7) BS02 rna ? GO:0003676 ... P0A7V3 32820061
    567349 6vu3:J (3.7) BS01 rna ? GO:0000028 ... P0A7V8 32820061
    567350 6vu3:K (3.7) BS01 rna ? GO:0000028 ... P0A7W1 32820061
    567351 6vu3:K (3.7) BS02 rna ? GO:0000028 ... P0A7W1 32820061
    567352 6vu3:L (3.7) BS01 rna ? GO:0003735 ... P02358 32820061
    567353 6vu3:M (3.7) BS01 rna ? GO:0003723 ... P02359 32820061
    567354 6vu3:M (3.7) BS02 rna ? GO:0003723 ... P02359 32820061
    567355 6vu3:N (3.7) BS01 rna ? GO:0000028 ... P0A7W7 32820061
    567356 6vu3:O (3.7) BS01 rna ? GO:0000049 ... P0A7X3 32820061
    567357 6vu3:P (3.7) BS01 rna ? GO:0000049 ... P0A7R5 32820061
    567358 6vu3:Q (3.7) BS01 rna ? GO:0002181 ... P0A7R9 32820061
    567359 6vu3:R (3.7) BS01 rna ? GO:0000049 ... P0A7S3 32820061
    567360 6vu3:S (3.7) BS01 rna ? GO:0000028 ... P0AG59 32820061
    567361 6vu3:T (3.7) BS01 rna ? GO:0000028 ... P0ADZ4 32820061
    567362 6vu3:T (3.7) BS02 rna ? GO:0000028 ... P0ADZ4 32820061
    567363 6vu3:U (3.7) BS01 rna ? GO:0000028 ... P0A7T3 32820061
    567364 6vu3:V (3.7) BS01 rna ? GO:0000028 ... P0AG63 32820061
    567365 6vu3:W (3.7) BS01 rna ? GO:0000028 ... P0A7U3 32820061
    567366 6vu3:X (3.7) BS01 rna ? GO:0000049 ... P0A7S9 32820061
    567367 6vu3:X (3.7) BS02 rna ? GO:0000049 ... P0A7S9 32820061
    567368 6vu3:b (3.7) BS01 rna ? GO:0003735 ... P0A7L8 32820061
    567369 6vu3:b (3.7) BS02 rna ? GO:0003735 ... P0A7L8 32820061
    567370 6vu3:c (3.7) BS01 rna ? GO:0000027 ... P0A7M2 32820061
    567371 6vu3:e (3.7) BS01 rna ? GO:0000027 ... P0A7M6 32820061
    567372 6vu3:f (3.7) BS01 rna ? GO:0000027 ... P0AG51 32820061
    567373 6vu3:f (3.7) BS02 rna ? GO:0000027 ... P0AG51 32820061
    567374 6vu3:g (3.7) BS01 rna ? GO:0002181 ... P0A7M9 32820061
    567375 6vu3:h (3.7) BS01 rna ? GO:0000027 ... P60422 32820061
    567376 6vu3:i (3.7) BS01 rna ? GO:0000027 ... P0A7N4 32820061
    567377 6vu3:j (3.7) BS01 rna ? GO:0000027 ... P60438 32820061
    567378 6vu3:k (3.7) BS01 rna ? GO:0000027 ... P0A7N9 32820061
    567379 6vu3:l (3.7) BS01 rna ? GO:0001070 ... P60723 32820061
    567380 6vu3:m (3.7) BS01 rna ? GO:0002181 ... P0A7P5 32820061
    567381 6vu3:n (3.7) BS01 rna ? GO:0000027 ... P62399 32820061
    567382 6vu3:n (3.7) BS02 rna ? GO:0000027 ... P62399 32820061
    567383 6vu3:o (3.7) BS01 rna ? GO:0002181 ... P0A7Q1 32820061
    567384 6vu3:p (3.7) BS01 rna ? GO:0000027 ... P0AG55 32820061
    567385 6vu3:q (3.7) BS01 rna ? GO:0002181 ... P0A7Q6 32820061
    567386 6vu3:r (3.7) BS01 rna ? GO:0002181 ... P0A7R1 32820061
    567387 6vu3:s (3.7) BS01 rna ? GO:0002181 ... P0AA10 32820061
    567388 6vu3:t (3.7) BS01 rna ? GO:0002181 ... P0ADY3 32820061
    567389 6vu3:t (3.7) BS02 rna ? GO:0002181 ... P0ADY3 32820061
    567390 6vu3:u (3.7) BS01 rna ? GO:0002181 ... P02413 32820061
    567391 6vu3:v (3.7) BS01 rna ? GO:0000027 ... P0ADY7 32820061
    567392 6vu3:v (3.7) BS02 rna ? GO:0000027 ... P0ADY7 32820061
    567393 6vu3:w (3.7) BS01 rna ? GO:0000027 ... P0AG44 32820061
    567394 6vu3:x (3.7) BS01 rna ? GO:0002181 ... P0C018 32820061
    567395 6vu3:x (3.7) BS02 rna ? GO:0002181 ... P0C018 32820061
    567396 6vu3:y (3.7) BS01 rna ? GO:0000027 ... P0A7K6 32820061
    567397 6vu3:z (3.7) BS01 rna ? GO:0000027 ... P0A7L3 32820061
    567398 6vu6:A (2.1) BS01 GAL N/A N/A N/A 32820052
    567399 6vu6:A (2.1) BS02 SIA N/A N/A N/A 32820052
    567400 6vu6:A (2.1) BS03 SIA N/A N/A N/A 32820052

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).