SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    574201 6wkv:Z (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574202 6wkv:a (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574203 6wkv:a (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574204 6wkv:b (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574205 6wkv:b (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574206 6wkv:c (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574207 6wkv:c (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574208 6wkv:d (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574209 6wkv:d (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574210 6wkv:e (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574211 6wkv:e (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574212 6wkv:f (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574213 6wkv:f (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574214 6wkv:g (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574215 6wkv:g (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574216 6wkv:h (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574217 6wkv:h (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574218 6wkv:h (2.99) BS03 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574219 6wkv:i (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574220 6wkv:i (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574221 6wkv:j (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574222 6wkv:j (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574223 6wkv:k (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574224 6wkv:k (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574225 6wkv:l (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574226 6wkv:l (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574227 6wkv:m (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574228 6wkv:m (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574229 6wkv:n (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574230 6wkv:n (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574231 6wkv:o (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574232 6wkv:o (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574233 6wkv:p (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574234 6wkv:p (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574235 6wkv:p (2.99) BS03 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574236 6wkv:q (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574237 6wkv:q (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574238 6wkv:r (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574239 6wkv:r (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574240 6wkv:s (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574241 6wkv:s (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574242 6wkv:t (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574243 6wkv:t (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574244 6wkv:u (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574245 6wkv:u (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574246 6wkv:v (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574247 6wkv:v (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574248 6wkv:w (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574249 6wkv:w (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574250 6wkv:x (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574251 6wkv:x (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    574252 6wkw:A (3.6) BS01 NAD ? GO:0003714 ... P56545 33264605
    574253 6wkw:B (3.6) BS01 NAD ? GO:0003714 ... P56545 33264605
    574254 6wkw:C (3.6) BS01 NAD ? GO:0003714 ... P56545 33264605
    574255 6wkw:D (3.6) BS01 NAD ? GO:0003714 ... P56545 33264605
    574256 6wkz:A (2.23) BS01 8Y1 2.5.1.46 GO:0005515 ... P49366 34345355
    574257 6wkz:A (2.23) BS02 8Y1 2.5.1.46 GO:0005515 ... P49366 34345355
    574258 6wkz:B (2.23) BS01 8Y1 2.5.1.46 GO:0005515 ... P49366 34345355
    574259 6wkz:B (2.23) BS02 8Y1 2.5.1.46 GO:0005515 ... P49366 34345355
    574260 6wl2:A (3.3) BS01 peptide ? N/A P01901 33335016
    574261 6wl2:C (3.3) BS01 peptide N/A N/A N/A 33335016
    574262 6wl2:D (3.3) BS01 peptide ? N/A P01901 33335016
    574263 6wl2:F (3.3) BS01 peptide N/A N/A N/A 33335016
    574264 6wl2:G (3.3) BS01 peptide ? N/A P01901 33335016
    574265 6wl2:I (3.3) BS01 peptide N/A N/A N/A 33335016
    574266 6wl3:A (3.45) BS01 peptide ? N/A P01901 33335016
    574267 6wl3:C (3.45) BS01 peptide N/A N/A N/A 33335016
    574268 6wl3:D (3.45) BS01 peptide ? N/A P01901 33335016
    574269 6wl3:F (3.45) BS01 peptide N/A N/A N/A 33335016
    574270 6wl3:G (3.45) BS01 peptide ? N/A P01901 33335016
    574271 6wl3:I (3.45) BS01 peptide N/A N/A N/A 33335016
    574272 6wl4:A (3.6) BS01 peptide ? N/A P01901 33335016
    574273 6wl4:D (3.6) BS01 peptide ? N/A P01901 33335016
    574274 6wl4:F (3.6) BS01 peptide N/A N/A N/A 33335016
    574275 6wl4:G (3.6) BS01 peptide ? N/A P01901 33335016
    574276 6wl4:I (3.6) BS01 peptide N/A N/A N/A 33335016
    574277 6wl5:A (1.4) BS01 16A N/A N/A N/A 33976201
    574278 6wl5:A (1.4) BS02 16A N/A N/A N/A 33976201
    574279 6wl5:A (1.4) BS03 16A N/A N/A N/A 33976201
    574280 6wl5:B (1.4) BS01 16A N/A N/A N/A 33976201
    574281 6wl5:B (1.4) BS02 16A N/A N/A N/A 33976201
    574282 6wl5:B (1.4) BS03 16A N/A N/A N/A 33976201
    574283 6wl5:C (1.4) BS01 16A N/A N/A N/A 33976201
    574284 6wl5:C (1.4) BS02 16A N/A N/A N/A 33976201
    574285 6wl5:C (1.4) BS03 16A N/A N/A N/A 33976201
    574286 6wl5:D (1.4) BS01 16A N/A N/A N/A 33976201
    574287 6wl5:D (1.4) BS02 16A N/A N/A N/A 33976201
    574288 6wl6:A (2.12) BS01 91A 2.5.1.46 GO:0005515 ... P49366 34345355
    574289 6wl6:A (2.12) BS02 91A 2.5.1.46 GO:0005515 ... P49366 34345355
    574290 6wl6:B (2.12) BS01 91A 2.5.1.46 GO:0005515 ... P49366 34345355
    574291 6wl6:B (2.12) BS02 91A 2.5.1.46 GO:0005515 ... P49366 34345355
    574292 6wlb:A (3.5) BS01 BGC 2.4.1.12 GO:0005886 ... Q6J8X0 32646917
    574293 6wlb:A (3.5) BS02 BGC 2.4.1.12 GO:0005886 ... Q6J8X0 32646917
    574294 6wlb:A (3.5) BS03 BGC 2.4.1.12 GO:0005886 ... Q6J8X0 32646917
    574295 6wlb:B (3.5) BS01 BGC 2.4.1.12 GO:0005886 ... Q6J8X0 32646917
    574296 6wlb:B (3.5) BS02 BGC 2.4.1.12 GO:0005886 ... Q6J8X0 32646917
    574297 6wlb:B (3.5) BS03 BGC 2.4.1.12 GO:0005886 ... Q6J8X0 32646917
    574298 6wlb:C (3.5) BS01 BGC 2.4.1.12 GO:0005886 ... Q6J8X0 32646917
    574299 6wlb:C (3.5) BS02 BGC 2.4.1.12 GO:0005886 ... Q6J8X0 32646917
    574300 6wlc:A (1.82) BS01 U5P 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTD1 33564093
    574301 6wlc:B (1.82) BS01 U5P 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTD1 33564093
    574302 6wle:A (3.0) BS01 FMN ? N/A Q94BT6 33337855
    574303 6wle:B (3.0) BS01 FMN ? N/A Q94BT6 33337855
    574304 6wle:C (3.0) BS01 FMN ? N/A Q94BT6 33337855
    574305 6wle:D (3.0) BS01 FMN ? N/A Q94BT6 33337855
    574306 6wle:E (3.0) BS01 FMN ? N/A Q94BT6 33337855
    574307 6wle:F (3.0) BS01 FMN ? N/A Q94BT6 33337855
    574308 6wle:G (3.0) BS01 FMN ? N/A Q94BT6 33337855
    574309 6wlf:A (2.05) BS01 OPE 2.1.1.103 GO:0009058 ... A0A1I7RPU0 32479776
    574310 6wlf:A (2.05) BS02 SAH 2.1.1.103 GO:0009058 ... A0A1I7RPU0 32479776
    574311 6wlf:B (2.05) BS01 OPE 2.1.1.103 GO:0009058 ... A0A1I7RPU0 32479776
    574312 6wlf:B (2.05) BS02 SAH 2.1.1.103 GO:0009058 ... A0A1I7RPU0 32479776
    574313 6wlh:A (-1.00) BS01 rna ? N/A P19544 32955251
    574314 6wlh:A (-1.00) BS02 ZN ? N/A P19544 32955251
    574315 6wlh:A (-1.00) BS03 ZN ? N/A P19544 32955251
    574316 6wlh:A (-1.00) BS04 ZN ? N/A P19544 32955251
    574317 6wlh:A (-1.00) BS05 ZN ? N/A P19544 32955251
    574318 6wlp:A (3.0) BS01 FMN ? N/A Q94BT6 33337855
    574319 6wlp:B (3.0) BS01 FMN ? N/A Q94BT6 33337855
    574320 6wlp:C (3.0) BS01 FMN ? N/A Q94BT6 33337855
    574321 6wlp:D (3.0) BS01 FMN ? N/A Q94BT6 33337855
    574322 6wlp:E (3.0) BS01 FMN ? N/A Q94BT6 33337855
    574323 6wlp:F (3.0) BS01 FMN ? N/A Q94BT6 33337855
    574324 6wlp:G (3.0) BS01 FMN ? N/A Q94BT6 33337855
    574325 6wlw:0 (3.0) BS01 WSS ? GO:0000139 ... Q99437 33065002
    574326 6wlw:0 (3.0) BS02 WSS ? GO:0000139 ... Q99437 33065002
    574327 6wlw:0 (3.0) BS03 WSS ? GO:0000139 ... Q99437 33065002
    574328 6wlw:0 (3.0) BS04 WSS ? GO:0000139 ... Q99437 33065002
    574329 6wlw:0 (3.0) BS05 WSS ? GO:0000139 ... Q99437 33065002
    574330 6wlw:0 (3.0) BS06 WSS ? GO:0000139 ... Q99437 33065002
    574331 6wlw:3 (3.0) BS01 WSS ? GO:0000139 ... P27449 33065002
    574332 6wlw:4 (3.0) BS01 WSS ? GO:0000139 ... P27449 33065002
    574333 6wlw:7 (3.0) BS01 WSS ? GO:0000139 ... P27449 33065002
    574334 6wlw:R (3.0) BS01 BGC ? GO:0000220 ... Q93050 33065002
    574335 6wlw:R (3.0) BS02 SIA ? GO:0000220 ... Q93050 33065002
    574336 6wlw:R (3.0) BS03 MAN ? GO:0000220 ... Q93050 33065002
    574337 6wlw:R (3.0) BS04 CLR ? GO:0000220 ... Q93050 33065002
    574338 6wlw:R (3.0) BS05 WJP ? GO:0000220 ... Q93050 33065002
    574339 6wlw:T (3.0) BS01 WSS 3.1.-.- GO:0000139 ... Q6P5S7 33065002
    574340 6wlw:U (3.0) BS01 WSS ? N/A Q15904 33065002
    574341 6wlw:U (3.0) BS02 WSS ? N/A Q15904 33065002
    574342 6wlw:V (3.0) BS01 WSS ? GO:0016020 ... O75787 33065002
    574343 6wlw:V (3.0) BS02 WSS ? GO:0016020 ... O75787 33065002
    574344 6wlw:V (3.0) BS03 WSS ? GO:0016020 ... O75787 33065002
    574345 6wlx:A (2.2) BS01 peptide 2.7.11.1 GO:0004672 ... O96013 32585314
    574346 6wly:A (1.9) BS01 peptide 2.7.11.1 GO:0004672 ... O96013 32585314
    574347 6wlz:C (2.9) BS01 ADP 7.1.2.2 GO:0000139 ... P38606 33065002
    574348 6wlz:F (2.9) BS01 ADP ? GO:0000221 ... P21281 33065002
    574349 6wm1:A (1.8) BS01 peptide ? N/A P62993 32916312
    574350 6wm1:C (1.8) BS01 peptide ? N/A P62993 32916312
    574351 6wm1:C (1.8) BS02 CA ? N/A P62993 32916312
    574352 6wm2:0 (3.1) BS01 WSS ? GO:0000139 ... Q99437 33065002
    574353 6wm2:0 (3.1) BS02 WSS ? GO:0000139 ... Q99437 33065002
    574354 6wm2:0 (3.1) BS03 WSS ? GO:0000139 ... Q99437 33065002
    574355 6wm2:0 (3.1) BS04 WSS ? GO:0000139 ... Q99437 33065002
    574356 6wm2:0 (3.1) BS05 WSS ? GO:0000139 ... Q99437 33065002
    574357 6wm2:3 (3.1) BS01 WSS ? GO:0000139 ... P27449 33065002
    574358 6wm2:C (3.1) BS01 ADP 7.1.2.2 GO:0000139 ... P38606 33065002
    574359 6wm2:F (3.1) BS01 ADP ? GO:0000221 ... P21281 33065002
    574360 6wm2:R (3.1) BS01 SIA ? GO:0000220 ... Q93050 33065002
    574361 6wm2:R (3.1) BS02 BMA ? GO:0000220 ... Q93050 33065002
    574362 6wm2:R (3.1) BS03 MAN ? GO:0000220 ... Q93050 33065002
    574363 6wm2:R (3.1) BS04 CLR ? GO:0000220 ... Q93050 33065002
    574364 6wm2:R (3.1) BS05 WJP ? GO:0000220 ... Q93050 33065002
    574365 6wm2:T (3.1) BS01 WSS 3.1.-.- GO:0000139 ... Q6P5S7 33065002
    574366 6wm2:U (3.1) BS01 WSS ? N/A Q15904 33065002
    574367 6wm2:U (3.1) BS02 WSS ? N/A Q15904 33065002
    574368 6wm2:U (3.1) BS03 WSS ? N/A Q15904 33065002
    574369 6wm2:V (3.1) BS01 WSS ? GO:0016020 ... O75787 33065002
    574370 6wm2:V (3.1) BS02 WSS ? GO:0016020 ... O75787 33065002
    574371 6wm2:V (3.1) BS03 WSS ? GO:0016020 ... O75787 33065002
    574372 6wm2:V (3.1) BS04 WSS ? GO:0016020 ... O75787 33065002
    574373 6wm3:B (3.4) BS01 ADP 7.1.2.2 GO:0000139 ... P38606 33065002
    574374 6wm3:E (3.4) BS01 ADP ? GO:0000221 ... P21281 33065002
    574375 6wm4:A (3.6) BS01 ADP 7.1.2.2 GO:0000139 ... P38606 33065002
    574376 6wm5:A (1.961) BS01 PO4 ?
    2.7.8.-
    GO:0008654 ... O27985
    U5WZP7
    32389689
    574377 6wm5:A (1.961) BS02 8K6 ?
    2.7.8.-
    GO:0008654 ... O27985
    U5WZP7
    32389689
    574378 6wm5:A (1.961) BS03 8K6 ?
    2.7.8.-
    GO:0008654 ... O27985
    U5WZP7
    32389689
    574379 6wm5:A (1.961) BS04 GOL ?
    2.7.8.-
    GO:0008654 ... O27985
    U5WZP7
    32389689
    574380 6wm5:C (1.961) BS01 8K6 ?
    2.7.8.-
    GO:0008654 ... O27985
    U5WZP7
    32389689
    574381 6wm5:C (1.961) BS02 8K6 ?
    2.7.8.-
    GO:0008654 ... O27985
    U5WZP7
    32389689
    574382 6wma:A (2.5) BS01 dna N/A GO:0003824 ... N/A 33098858
    574383 6wma:A (2.5) BS02 ZN N/A GO:0003824 ... N/A 33098858
    574384 6wmb:A (3.02) BS01 dna N/A GO:0003824 ... N/A 33098858
    574385 6wmb:A (3.02) BS02 ZN N/A GO:0003824 ... N/A 33098858
    574386 6wmc:A (3.49) BS01 dna N/A GO:0003824 ... N/A 33098858
    574387 6wmc:A (3.49) BS02 ZN N/A GO:0003824 ... N/A 33098858
    574388 6wmd:A (1.5) BS01 peptide ? N/A Q9UH99 33058875
    574389 6wme:A (1.53) BS01 peptide ? N/A Q9UH99 33058875
    574390 6wmf:A (2.6) BS01 peptide ? N/A Q9UH99 33058875
    574391 6wmi:A (2.75) BS01 dna ? N/A Q86VK4 33301730
    574392 6wmi:A (2.75) BS02 dna ? N/A Q86VK4 33301730
    574393 6wmi:A (2.75) BS03 dna ? N/A Q86VK4 33301730
    574394 6wmi:A (2.75) BS04 ZN ? N/A Q86VK4 33301730
    574395 6wmi:A (2.75) BS05 ZN ? N/A Q86VK4 33301730
    574396 6wmi:A (2.75) BS06 ZN ? N/A Q86VK4 33301730
    574397 6wmi:A (2.75) BS07 ZN ? N/A Q86VK4 33301730
    574398 6wmi:A (2.75) BS08 ZN ? N/A Q86VK4 33301730
    574399 6wmi:D (2.75) BS01 dna ? N/A Q86VK4 33301730
    574400 6wmi:D (2.75) BS02 dna ? N/A Q86VK4 33301730

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).