SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    576601 6x15:A (3.05) BS07 6OU ? GO:0005283 ... O59010 33155546
    576602 6x15:A (3.05) BS08 6OU ? GO:0005283 ... O59010 33155546
    576603 6x15:A (3.05) BS09 6OU ? GO:0005283 ... O59010 33155546
    576604 6x15:A (3.05) BS10 6OU ? GO:0005283 ... O59010 33155546
    576605 6x15:B (3.05) BS01 NA ? GO:0005283 ... O59010 33155546
    576606 6x15:B (3.05) BS02 NA ? GO:0005283 ... O59010 33155546
    576607 6x15:B (3.05) BS03 NA ? GO:0005283 ... O59010 33155546
    576608 6x15:B (3.05) BS04 ASP ? GO:0005283 ... O59010 33155546
    576609 6x15:B (3.05) BS05 6OU ? GO:0005283 ... O59010 33155546
    576610 6x15:B (3.05) BS06 6OU ? GO:0005283 ... O59010 33155546
    576611 6x15:B (3.05) BS07 6OU ? GO:0005283 ... O59010 33155546
    576612 6x15:B (3.05) BS08 6OU ? GO:0005283 ... O59010 33155546
    576613 6x15:B (3.05) BS09 6OU ? GO:0005283 ... O59010 33155546
    576614 6x15:B (3.05) BS10 6OU ? GO:0005283 ... O59010 33155546
    576615 6x15:C (3.05) BS01 NA ? GO:0005283 ... O59010 33155546
    576616 6x15:C (3.05) BS02 NA ? GO:0005283 ... O59010 33155546
    576617 6x15:C (3.05) BS03 NA ? GO:0005283 ... O59010 33155546
    576618 6x15:C (3.05) BS04 ASP ? GO:0005283 ... O59010 33155546
    576619 6x15:C (3.05) BS05 6OU ? GO:0005283 ... O59010 33155546
    576620 6x15:C (3.05) BS06 6OU ? GO:0005283 ... O59010 33155546
    576621 6x15:C (3.05) BS07 6OU ? GO:0005283 ... O59010 33155546
    576622 6x15:C (3.05) BS08 6OU ? GO:0005283 ... O59010 33155546
    576623 6x15:C (3.05) BS09 6OU ? GO:0005283 ... O59010 33155546
    576624 6x15:C (3.05) BS10 6OU ? GO:0005283 ... O59010 33155546
    576625 6x16:A (3.39) BS01 6OU ? GO:0005283 ... O59010 33155546
    576626 6x16:A (3.39) BS02 TB1 ? GO:0005283 ... O59010 33155546 BindingDB: Kd=100nM
    576627 6x16:B (3.39) BS01 6OU ? GO:0005283 ... O59010 33155546
    576628 6x16:B (3.39) BS02 TB1 ? GO:0005283 ... O59010 33155546 BindingDB: Kd=100nM
    576629 6x16:B (3.39) BS03 6OU ? GO:0005283 ... O59010 33155546
    576630 6x16:C (3.39) BS01 6OU ? GO:0005283 ... O59010 33155546
    576631 6x16:C (3.39) BS02 TB1 ? GO:0005283 ... O59010 33155546 BindingDB: Kd=100nM
    576632 6x17:A (3.66) BS01 6OU ? GO:0005283 ... O59010 33155546
    576633 6x17:B (3.66) BS01 6OU ? GO:0005283 ... O59010 33155546
    576634 6x17:C (3.66) BS01 6OU ? GO:0005283 ... O59010 33155546
    576635 6x19:R (2.1) BS01 UK1 ? GO:0004888 ... P43220 33027691
    576636 6x1a:R (2.5) BS01 UK4 ? GO:0004888 ... P43220 33027691 BindingDB: EC50=0.950nM
    576637 6x1b:A (1.97) BS01 rna 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTD1 33564093
    576638 6x1b:B (1.97) BS01 rna 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTD1 33564093
    576639 6x1c:A (2.9) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    576640 6x1c:A (2.9) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    576641 6x1c:B (2.9) BS01 GDP ? GO:0000226 ... P02554 34406768
    576642 6x1c:B (2.9) BS02 Y5J ? GO:0000226 ... P02554 34406768
    576643 6x1c:C (2.9) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    576644 6x1c:C (2.9) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    576645 6x1c:D (2.9) BS01 GTP ? GO:0000226 ... P02554 34406768
    576646 6x1c:D (2.9) BS02 Y5J ? GO:0000226 ... P02554 34406768
    576647 6x1c:F (2.9) BS01 ACP N/A GO:0036211 ... N/A 34406768
    576648 6x1e:A (2.9) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    576649 6x1e:A (2.9) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    576650 6x1e:B (2.9) BS01 GDP ? GO:0000226 ... P02554 34406768
    576651 6x1e:B (2.9) BS02 Y5L ? GO:0000226 ... P02554 34406768
    576652 6x1e:C (2.9) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    576653 6x1e:C (2.9) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    576654 6x1e:D (2.9) BS01 GTP ? GO:0000226 ... P02554 34406768
    576655 6x1e:D (2.9) BS02 Y5L ? GO:0000226 ... P02554 34406768
    576656 6x1e:F (2.9) BS01 ACP N/A GO:0036211 ... N/A 34406768
    576657 6x1f:A (2.7) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    576658 6x1f:A (2.7) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    576659 6x1f:B (2.7) BS01 GDP ? GO:0000226 ... P02554 34406768
    576660 6x1f:B (2.7) BS02 Y5M ? GO:0000226 ... P02554 34406768
    576661 6x1f:C (2.7) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    576662 6x1f:C (2.7) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    576663 6x1f:D (2.7) BS01 GTP ? GO:0000226 ... P02554 34406768
    576664 6x1f:D (2.7) BS02 Y5M ? GO:0000226 ... P02554 34406768
    576665 6x1f:F (2.7) BS01 ACP N/A GO:0036211 ... N/A 34406768
    576666 6x1j:A (1.945) BS01 dna 3.1.-.- GO:0000373 ... Q34807 35317996
    576667 6x1j:A (1.945) BS02 dna 3.1.-.- GO:0000373 ... Q34807 35317996
    576668 6x1m:A (3.51) BS01 UKS 3.4.21.53 GO:0004176 ... P36776 33821636
    576669 6x1m:B (3.51) BS01 UKS 3.4.21.53 GO:0004176 ... P36776 33821636
    576670 6x1o:A (2.094) BS01 UKM 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    576671 6x1o:A (2.094) BS02 PTE 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    576672 6x1o:A (2.094) BS03 SF4 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    576673 6x1o:A (2.094) BS04 MG 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    576674 6x1o:A (2.094) BS05 PO4 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    576675 6x1o:B (2.094) BS01 SF4 ? GO:0016491 ... I6U881 36269456
    576676 6x1o:B (2.094) BS02 SF4 ? GO:0016491 ... I6U881 36269456
    576677 6x1o:B (2.094) BS03 SF4 ? GO:0016491 ... I6U881 36269456
    576678 6x1o:B (2.094) BS04 SF4 ? GO:0016491 ... I6U881 36269456
    576679 6x1o:B (2.094) BS05 PO4 ? GO:0016491 ... I6U881 36269456
    576680 6x1o:C (2.094) BS01 UKM 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    576681 6x1o:C (2.094) BS02 PTE 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    576682 6x1o:C (2.094) BS03 SF4 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    576683 6x1o:C (2.094) BS04 MG 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    576684 6x1o:C (2.094) BS05 PO4 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    576685 6x1o:D (2.094) BS01 SF4 ? GO:0016491 ... I6U881 36269456
    576686 6x1o:D (2.094) BS02 SF4 ? GO:0016491 ... I6U881 36269456
    576687 6x1o:D (2.094) BS03 SF4 ? GO:0016491 ... I6U881 36269456
    576688 6x1o:D (2.094) BS04 SF4 ? GO:0016491 ... I6U881 36269456
    576689 6x1q:A (1.8) BS01 MG 3.2.1.23 GO:0000287 ... P00722 32695410
    576690 6x1q:A (1.8) BS02 MG 3.2.1.23 GO:0000287 ... P00722 32695410
    576691 6x1q:B (1.8) BS01 MG 3.2.1.23 GO:0000287 ... P00722 32695410
    576692 6x1q:B (1.8) BS02 MG 3.2.1.23 GO:0000287 ... P00722 32695410
    576693 6x1q:C (1.8) BS01 MG 3.2.1.23 GO:0000287 ... P00722 32695410
    576694 6x1q:C (1.8) BS02 MG 3.2.1.23 GO:0000287 ... P00722 32695410
    576695 6x1q:D (1.8) BS01 MG 3.2.1.23 GO:0000287 ... P00722 32695410
    576696 6x1q:D (1.8) BS02 MG 3.2.1.23 GO:0000287 ... P00722 32695410
    576697 6x1s:A (1.65) BS01 peptide N/A N/A N/A 33547238
    576698 6x1s:B (1.65) BS01 peptide N/A N/A N/A 33547238
    576699 6x1s:C (1.65) BS01 peptide N/A N/A N/A 33547238
    576700 6x1s:C (1.65) BS02 peptide N/A N/A N/A 33547238
    576701 6x1s:D (1.65) BS01 peptide N/A N/A N/A 33547238
    576702 6x1s:E (1.65) BS01 peptide N/A N/A N/A 33547238
    576703 6x1s:E (1.65) BS02 peptide N/A N/A N/A 33547238
    576704 6x1s:F (1.65) BS01 peptide N/A N/A N/A 33547238
    576705 6x1s:H (1.65) BS01 peptide N/A N/A N/A 33547238
    576706 6x1s:H (1.65) BS02 peptide N/A N/A N/A 33547238
    576707 6x1s:L (1.65) BS01 peptide N/A N/A N/A 33547238
    576708 6x1t:A (2.34) BS01 peptide N/A N/A N/A 33547238
    576709 6x1t:A (2.34) BS02 peptide N/A N/A N/A 33547238
    576710 6x1t:B (2.34) BS01 peptide N/A N/A N/A 33547238
    576711 6x1t:C (2.34) BS01 peptide N/A N/A N/A 33547238
    576712 6x1t:D (2.34) BS01 peptide N/A N/A N/A 33547238
    576713 6x1t:E (2.34) BS01 peptide N/A N/A N/A 33547238
    576714 6x1t:F (2.34) BS01 peptide N/A N/A N/A 33547238
    576715 6x1t:G (2.34) BS01 peptide N/A N/A N/A 33547238
    576716 6x1t:H (2.34) BS01 peptide N/A N/A N/A 33547238
    576717 6x1t:I (2.34) BS01 peptide N/A N/A N/A 33547238
    576718 6x1t:J (2.34) BS01 peptide N/A N/A N/A 33547238
    576719 6x1t:J (2.34) BS02 peptide N/A N/A N/A 33547238
    576720 6x1t:K (2.34) BS01 peptide N/A N/A N/A 33547238
    576721 6x1t:L (2.34) BS01 peptide N/A N/A N/A 33547238
    576722 6x1u:A (1.641) BS01 peptide N/A N/A N/A 33547238
    576723 6x1u:B (1.641) BS01 peptide N/A N/A N/A 33547238
    576724 6x1u:H (1.641) BS01 peptide N/A N/A N/A 33547238
    576725 6x1u:L (1.641) BS01 peptide N/A N/A N/A 33547238
    576726 6x1v:H (2.11) BS01 peptide N/A N/A N/A 33547238
    576727 6x1v:L (2.11) BS01 peptide N/A N/A N/A 33547238
    576728 6x1w:H (1.95) BS01 peptide N/A N/A N/A 33547238
    576729 6x1w:L (1.95) BS01 peptide N/A N/A N/A 33547238
    576730 6x1y:A (2.35) BS01 UKV 3.1.-.- GO:0004519 ... Q9X1X0 33115610
    576731 6x1y:B (2.35) BS01 UKV 3.1.-.- GO:0004519 ... Q9X1X0 33115610
    576732 6x1z:A (1.9) BS01 UL1 3.1.-.- GO:0004519 ... Q9X1X0 33115610
    576733 6x1z:A (1.9) BS02 MG 3.1.-.- GO:0004519 ... Q9X1X0 33115610
    576734 6x1z:B (1.9) BS01 UL1 3.1.-.- GO:0004519 ... Q9X1X0 33115610
    576735 6x1z:B (1.9) BS02 MG 3.1.-.- GO:0004519 ... Q9X1X0 33115610
    576736 6x21:A (1.54) BS01 UKJ ? N/A Q99814 N/A
    576737 6x23:A (2.154) BS01 peptide ? N/A A9V7E4 32914530
    576738 6x24:A (3.25) BS01 FAD ? GO:0009785 ... Q96524 33398020
    576739 6x24:B (3.25) BS01 FAD ? GO:0009785 ... Q96524 33398020
    576740 6x24:C (3.25) BS01 FAD ? GO:0009785 ... Q96524 33398020
    576741 6x24:D (3.25) BS01 FAD ? GO:0009785 ... Q96524 33398020
    576742 6x26:A (4.1) BS01 dna 3.6.4.- GO:0000716 ... P30958 33480355
    576743 6x26:A (4.1) BS02 dna 3.6.4.- GO:0000716 ... P30958 33480355
    576744 6x26:I (4.1) BS01 rna 2.7.7.6 GO:0000345 ... P0A8V2 33480355
    576745 6x26:I (4.1) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 33480355
    576746 6x26:I (4.1) BS03 dna 2.7.7.6 GO:0000345 ... P0A8V2 33480355
    576747 6x26:J (4.1) BS01 rna 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576748 6x26:J (4.1) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576749 6x26:J (4.1) BS03 dna 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576750 6x26:J (4.1) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576751 6x26:J (4.1) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576752 6x26:J (4.1) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576753 6x27:A (2.12) BS01 BO2 3.4.21.53 GO:0004176 ... P36776 33821636
    576754 6x27:B (2.12) BS01 BO2 3.4.21.53 GO:0004176 ... P36776 33821636
    576755 6x27:C (2.12) BS01 BO2 3.4.21.53 GO:0004176 ... P36776 33821636
    576756 6x27:D (2.12) BS01 BO2 3.4.21.53 GO:0004176 ... P36776 33821636
    576757 6x27:E (2.12) BS01 BO2 3.4.21.53 GO:0004176 ... P36776 33821636
    576758 6x27:F (2.12) BS01 BO2 3.4.21.53 GO:0004176 ... P36776 33821636
    576759 6x27:G (2.12) BS01 BO2 3.4.21.53 GO:0004176 ... P36776 33821636
    576760 6x27:H (2.12) BS01 BO2 3.4.21.53 GO:0004176 ... P36776 33821636
    576761 6x27:I (2.12) BS01 BO2 3.4.21.53 GO:0004176 ... P36776 33821636
    576762 6x27:J (2.12) BS01 BO2 3.4.21.53 GO:0004176 ... P36776 33821636
    576763 6x27:K (2.12) BS01 BO2 3.4.21.53 GO:0004176 ... P36776 33821636
    576764 6x27:L (2.12) BS01 BO2 3.4.21.53 GO:0004176 ... P36776 33821636
    576765 6x28:A (1.92) BS01 ULG ? N/A Q99814 N/A BindingDB: IC50=<5.00nM
    576766 6x2e:A (1.8) BS01 NAD 1.2.1.12 GO:0000166 ... P0CE13 33058314
    576767 6x2e:C (1.8) BS01 NAD 1.2.1.12 GO:0000166 ... P0CE13 33058314
    576768 6x2e:D (1.8) BS01 NAD 1.2.1.12 GO:0000166 ... P0CE13 33058314
    576769 6x2f:A (4.0) BS01 dna 3.6.4.- GO:0000716 ... P30958 33480355
    576770 6x2f:A (4.0) BS02 dna 3.6.4.- GO:0000716 ... P30958 33480355
    576771 6x2f:A (4.0) BS03 ADP 3.6.4.- GO:0000716 ... P30958 33480355
    576772 6x2f:I (4.0) BS01 rna 2.7.7.6 GO:0000345 ... P0A8V2 33480355
    576773 6x2f:I (4.0) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 33480355
    576774 6x2f:I (4.0) BS03 dna 2.7.7.6 GO:0000345 ... P0A8V2 33480355
    576775 6x2f:J (4.0) BS01 rna 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576776 6x2f:J (4.0) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576777 6x2f:J (4.0) BS03 dna 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576778 6x2f:J (4.0) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576779 6x2f:J (4.0) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576780 6x2f:J (4.0) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576781 6x2h:A (2.0) BS01 ULD ? N/A Q99814 N/A
    576782 6x2j:A (3.0) BS01 ULJ ? GO:0005216 ... O75762 33152265
    576783 6x2j:A (3.0) BS02 ULJ ? GO:0005216 ... O75762 33152265
    576784 6x2j:B (3.0) BS01 ULJ ? GO:0005216 ... O75762 33152265
    576785 6x2j:B (3.0) BS02 ULJ ? GO:0005216 ... O75762 33152265
    576786 6x2j:C (3.0) BS01 ULJ ? GO:0005216 ... O75762 33152265
    576787 6x2j:C (3.0) BS02 ULJ ? GO:0005216 ... O75762 33152265
    576788 6x2j:D (3.0) BS01 ULJ ? GO:0005216 ... O75762 33152265
    576789 6x2j:D (3.0) BS02 ULJ ? GO:0005216 ... O75762 33152265
    576790 6x2m:A (2.351) BS01 GNP 3.6.5.- GO:0000054 ... P62826 32520643
    576791 6x2m:A (2.351) BS02 MG 3.6.5.- GO:0000054 ... P62826 32520643
    576792 6x2n:A (3.9) BS01 dna 3.6.4.- GO:0000716 ... P30958 33480355
    576793 6x2n:A (3.9) BS02 dna 3.6.4.- GO:0000716 ... P30958 33480355
    576794 6x2n:A (3.9) BS03 ATP 3.6.4.- GO:0000716 ... P30958 33480355
    576795 6x2n:I (3.9) BS01 rna 2.7.7.6 GO:0000345 ... P0A8V2 33480355
    576796 6x2n:I (3.9) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 33480355
    576797 6x2n:I (3.9) BS03 dna 2.7.7.6 GO:0000345 ... P0A8V2 33480355
    576798 6x2n:J (3.9) BS01 rna 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576799 6x2n:J (3.9) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576800 6x2n:J (3.9) BS03 dna 2.7.7.6 GO:0000287 ... P0A8T7 33480355

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).