SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    576801 6x2n:J (3.9) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576802 6x2n:J (3.9) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576803 6x2n:J (3.9) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 33480355
    576804 6x2o:A (2.551) BS01 GNP 3.6.5.- GO:0000054 ... P62826 32520643
    576805 6x2o:A (2.551) BS02 MG 3.6.5.- GO:0000054 ... P62826 32520643
    576806 6x2p:A (2.401) BS01 GNP 3.6.5.- GO:0000054 ... P62826 32520643
    576807 6x2p:A (2.401) BS02 MG 3.6.5.- GO:0000054 ... P62826 32520643
    576808 6x2p:C (2.401) BS01 peptide ? GO:0000055 ... P30822 32520643
    576809 6x2q:A (2.27) BS01 GCS ? GO:0005576 ... A0A0C5VFC0 N/A
    576810 6x2q:A (2.27) BS02 GCS ? GO:0005576 ... A0A0C5VFC0 N/A
    576811 6x2q:A (2.27) BS03 GCS ? GO:0005576 ... A0A0C5VFC0 N/A
    576812 6x2r:A (2.299) BS01 GNP 3.6.5.- GO:0000054 ... P62826 32520643
    576813 6x2r:A (2.299) BS02 MG 3.6.5.- GO:0000054 ... P62826 32520643
    576814 6x2r:C (2.299) BS01 peptide ? GO:0000055 ... P30822 32520643
    576815 6x2s:A (2.496) BS01 GNP 3.6.5.- GO:0000054 ... P62826 32520643
    576816 6x2s:A (2.496) BS02 MG 3.6.5.- GO:0000054 ... P62826 32520643
    576817 6x2s:C (2.496) BS01 peptide ? GO:0000055 ... P30822 32520643
    576818 6x2u:A (2.2) BS01 GNP 3.6.5.- GO:0000054 ... P62826 32520643
    576819 6x2u:A (2.2) BS02 MG 3.6.5.- GO:0000054 ... P62826 32520643
    576820 6x2u:C (2.2) BS01 peptide ? GO:0000055 ... P30822 32520643
    576821 6x2v:A (2.822) BS01 GNP 3.6.5.- GO:0000054 ... P62826 32520643
    576822 6x2v:A (2.822) BS02 MG 3.6.5.- GO:0000054 ... P62826 32520643
    576823 6x2v:C (2.822) BS01 peptide ? GO:0000055 ... P30822 32520643
    576824 6x2w:A (3.001) BS01 GNP 3.6.5.- GO:0000054 ... P62826 32520643
    576825 6x2w:A (3.001) BS02 MG 3.6.5.- GO:0000054 ... P62826 32520643
    576826 6x2w:C (3.001) BS01 peptide ? GO:0000055 ... P30822 32520643
    576827 6x2x:A (2.458) BS01 GNP 3.6.5.- GO:0000054 ... P62826 32520643
    576828 6x2x:A (2.458) BS02 MG 3.6.5.- GO:0000054 ... P62826 32520643
    576829 6x2x:C (2.458) BS01 peptide ? GO:0000055 ... P30822 32520643
    576830 6x2y:A (2.304) BS01 GNP 3.6.5.- GO:0000054 ... P62826 32520643
    576831 6x2y:A (2.304) BS02 MG 3.6.5.- GO:0000054 ... P62826 32520643
    576832 6x2y:C (2.304) BS01 peptide ? GO:0000055 ... P30822 32520643
    576833 6x2z:A (3.03) BS01 ASP ? GO:0001662 ... P43005 33658209
    576834 6x2z:A (3.03) BS02 NA ? GO:0001662 ... P43005 33658209
    576835 6x2z:A (3.03) BS03 NA ? GO:0001662 ... P43005 33658209
    576836 6x2z:A (3.03) BS04 NA ? GO:0001662 ... P43005 33658209
    576837 6x32:B (3.8) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576838 6x32:E (3.8) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576839 6x32:H (3.8) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576840 6x32:K (3.8) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576841 6x33:B (4.2) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576842 6x33:E (4.2) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576843 6x33:H (4.2) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576844 6x33:K (4.2) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576845 6x34:B (4.7) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576846 6x34:D (4.7) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576847 6x34:F (4.7) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576848 6x34:H (4.7) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576849 6x35:B (4.2) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576850 6x35:E (4.2) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576851 6x35:H (4.2) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576852 6x35:K (4.2) BS01 ZN N/A GO:0005216 ... N/A 33547325
    576853 6x37:A (1.94) BS01 ULS ? N/A Q99814 N/A
    576854 6x38:A (1.3) BS01 ZN 3.1.3.48 N/A P16621 35622884
    576855 6x38:A (1.3) BS02 ZN 3.1.3.48 N/A P16621 35622884
    576856 6x39:A (1.7) BS01 SOR 3.1.3.48 N/A A2A8L5 35622884
    576857 6x3b:A (1.91) BS01 NDP 1.1.1.281 GO:0009103 ... Q9HTB6 N/A
    576858 6x3b:B (1.91) BS01 NDP 1.1.1.281 GO:0009103 ... Q9HTB6 N/A
    576859 6x3b:B (1.91) BS02 POP 1.1.1.281 GO:0009103 ... Q9HTB6 N/A
    576860 6x3b:C (1.91) BS01 NDP 1.1.1.281 GO:0009103 ... Q9HTB6 N/A
    576861 6x3b:D (1.91) BS01 NDP 1.1.1.281 GO:0009103 ... Q9HTB6 N/A
    576862 6x3b:D (1.91) BS02 NDP 1.1.1.281 GO:0009103 ... Q9HTB6 N/A
    576863 6x3c:A (3.05) BS01 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576864 6x3c:A (3.05) BS02 O7S 2.3.1.- GO:0016740 ... P26839 32968273
    576865 6x3c:A (3.05) BS03 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576866 6x3c:A (3.05) BS04 O7S 2.3.1.- GO:0016740 ... P26839 32968273
    576867 6x3c:B (3.05) BS01 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576868 6x3c:B (3.05) BS02 O7S 2.3.1.- GO:0016740 ... P26839 32968273
    576869 6x3c:B (3.05) BS03 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576870 6x3c:B (3.05) BS04 O7S 2.3.1.- GO:0016740 ... P26839 32968273
    576871 6x3c:C (3.05) BS01 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576872 6x3c:C (3.05) BS02 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576873 6x3c:C (3.05) BS03 O7S 2.3.1.- GO:0016740 ... P26839 32968273
    576874 6x3c:C (3.05) BS04 O7S 2.3.1.- GO:0016740 ... P26839 32968273
    576875 6x3c:D (3.05) BS01 O7S 2.3.1.- GO:0016740 ... P26839 32968273
    576876 6x3c:D (3.05) BS02 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576877 6x3c:D (3.05) BS03 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576878 6x3c:D (3.05) BS04 O7S 2.3.1.- GO:0016740 ... P26839 32968273
    576879 6x3c:E (3.05) BS01 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576880 6x3c:E (3.05) BS02 O7S 2.3.1.- GO:0016740 ... P26839 32968273
    576881 6x3c:E (3.05) BS03 MG 2.3.1.- GO:0016740 ... P26839 32968273
    576882 6x3c:E (3.05) BS04 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576883 6x3c:F (3.05) BS01 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576884 6x3c:F (3.05) BS02 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576885 6x3c:F (3.05) BS03 O7S 2.3.1.- GO:0016740 ... P26839 32968273
    576886 6x3d:A (2.0) BS01 ULM ? N/A Q99814 N/A
    576887 6x3e:A (3.42) BS01 ASP ? GO:0001662 ... P43005 33658209
    576888 6x3e:A (3.42) BS02 NA ? GO:0001662 ... P43005 33658209
    576889 6x3e:A (3.42) BS03 NA ? GO:0001662 ... P43005 33658209
    576890 6x3e:A (3.42) BS04 NA ? GO:0001662 ... P43005 33658209
    576891 6x3j:A (2.7) BS01 O7V 2.3.1.- GO:0016740 ... P26839 32968273
    576892 6x3j:A (2.7) BS02 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576893 6x3j:A (2.7) BS03 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576894 6x3j:B (2.7) BS01 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576895 6x3j:B (2.7) BS02 O7V 2.3.1.- GO:0016740 ... P26839 32968273
    576896 6x3j:B (2.7) BS03 O7V 2.3.1.- GO:0016740 ... P26839 32968273
    576897 6x3j:B (2.7) BS04 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576898 6x3j:C (2.7) BS01 O7V 2.3.1.- GO:0016740 ... P26839 32968273
    576899 6x3j:C (2.7) BS02 MG 2.3.1.- GO:0016740 ... P26839 32968273
    576900 6x3j:C (2.7) BS03 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576901 6x3j:C (2.7) BS04 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576902 6x3j:D (2.7) BS01 O7V 2.3.1.- GO:0016740 ... P26839 32968273
    576903 6x3j:D (2.7) BS02 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576904 6x3j:D (2.7) BS03 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576905 6x3j:E (2.7) BS01 O7V 2.3.1.- GO:0016740 ... P26839 32968273
    576906 6x3j:E (2.7) BS02 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576907 6x3j:E (2.7) BS03 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576908 6x3j:F (2.7) BS01 O7V 2.3.1.- GO:0016740 ... P26839 32968273
    576909 6x3j:F (2.7) BS02 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576910 6x3j:F (2.7) BS03 SXA 2.3.1.- GO:0016740 ... P26839 32968273
    576911 6x3k:A (2.5) BS01 GAL ? N/A A8AWU7 35585145
    576912 6x3k:A (2.5) BS02 SIA ? N/A A8AWU7 35585145
    576913 6x3l:A (2.7) BS01 UMJ ? GO:0016020 ... Q99523 32738972
    576914 6x3m:A (3.581) BS01 BDP 3.2.1.35 GO:0004415 ... P15316 N/A
    576915 6x3m:B (3.581) BS01 BDP 3.2.1.35 GO:0004415 ... P15316 N/A
    576916 6x3m:B (3.581) BS02 BDP 3.2.1.35 GO:0004415 ... P15316 N/A
    576917 6x3m:C (3.581) BS01 BDP 3.2.1.35 GO:0004415 ... P15316 N/A
    576918 6x3m:D (3.581) BS01 BDP 3.2.1.35 GO:0004415 ... P15316 N/A
    576919 6x3m:D (3.581) BS02 BDP 3.2.1.35 GO:0004415 ... P15316 N/A
    576920 6x3m:E (3.581) BS01 BDP 3.2.1.35 GO:0004415 ... P15316 N/A
    576921 6x3m:F (3.581) BS01 BDP 3.2.1.35 GO:0004415 ... P15316 N/A
    576922 6x3m:G (3.581) BS01 BDP 3.2.1.35 GO:0004415 ... P15316 N/A
    576923 6x3m:H (3.581) BS01 BDP 3.2.1.35 GO:0004415 ... P15316 N/A
    576924 6x3m:H (3.581) BS02 BDP 3.2.1.35 GO:0004415 ... P15316 N/A
    576925 6x3m:I (3.581) BS01 BDP 3.2.1.35 GO:0004415 ... P15316 N/A
    576926 6x3n:A (1.95) BS01 ULV 2.7.10.2 GO:0004672 ... Q06187 32738973 MOAD: ic50=0.083nM
    576927 6x3n:A (1.95) BS02 5WE 2.7.10.2 GO:0004672 ... Q06187 32738973
    576928 6x3o:A (1.9) BS01 ULY 2.7.10.2 GO:0004672 ... Q06187 32738973 MOAD: ic50=0.21nM
    BindingDB: IC50=0.22nM
    576929 6x3o:A (1.9) BS02 5WE 2.7.10.2 GO:0004672 ... Q06187 32738973
    576930 6x3o:B (1.9) BS01 ULY 2.7.10.2 GO:0004672 ... Q06187 32738973 MOAD: ic50=0.21nM
    BindingDB: IC50=0.22nM
    576931 6x3o:B (1.9) BS02 5WE 2.7.10.2 GO:0004672 ... Q06187 32738973
    576932 6x3p:A (1.34) BS01 UM4 2.7.10.2 GO:0004672 ... Q06187 32738973 MOAD: ic50=0.58nM
    BindingDB: IC50=0.58nM
    576933 6x3p:A (1.34) BS02 UM4 2.7.10.2 GO:0004672 ... Q06187 32738973 MOAD: ic50=0.58nM
    BindingDB: IC50=0.58nM
    576934 6x3q:A (2.15) BS01 GAL ? N/A A8AWU7 35585145
    576935 6x3q:A (2.15) BS02 SIA ? N/A A8AWU7 35585145
    576936 6x3r:A (1.8) BS01 ZXX 5.2.1.8 GO:0000413 ... P62937 32539379 MOAD: Kd=30000nM
    576937 6x3s:A (3.12) BS01 J94 ? GO:0004888 ... P47870 32879488
    576938 6x3s:B (3.12) BS01 J94 ? GO:0004888 ... P14867 32879488
    576939 6x3s:C (3.12) BS01 J94 ? GO:0004888 ... P47870 32879488
    576940 6x3s:D (3.12) BS01 MAN ? GO:0004888 ... P14867 32879488
    576941 6x3s:D (3.12) BS02 J94 ? GO:0004888 ... P14867 32879488
    576942 6x3s:E (3.12) BS01 MAN ? GO:0004888 ... P18507 32879488
    576943 6x3s:E (3.12) BS02 MAN ? GO:0004888 ... P18507 32879488
    576944 6x3s:E (3.12) BS03 MAN ? GO:0004888 ... P18507 32879488
    576945 6x3t:A (2.55) BS01 ABU ? GO:0004888 ... P47870 32879488
    576946 6x3t:A (2.55) BS02 PFL ? GO:0004888 ... P47870 32879488
    576947 6x3t:B (2.55) BS01 ABU ? GO:0004888 ... P14867 32879488 BindingDB: Ki=21.37nM, EC50=3802nM
    576948 6x3t:B (2.55) BS02 PFL ? GO:0004888 ... P14867 32879488 BindingDB: EC50=50000nM
    576949 6x3t:C (2.55) BS01 ABU ? GO:0004888 ... P47870 32879488
    576950 6x3t:C (2.55) BS02 PFL ? GO:0004888 ... P47870 32879488
    576951 6x3t:D (2.55) BS01 MAN ? GO:0004888 ... P14867 32879488
    576952 6x3t:D (2.55) BS02 ABU ? GO:0004888 ... P14867 32879488 BindingDB: Ki=21.37nM, EC50=3802nM
    576953 6x3t:E (2.55) BS01 MAN ? GO:0004888 ... P18507 32879488
    576954 6x3u:A (3.5) BS01 ABU ? GO:0004888 ... P47870 32879488
    576955 6x3u:C (3.5) BS01 ABU ? GO:0004888 ... P47870 32879488
    576956 6x3u:D (3.5) BS01 MAN ? GO:0004888 ... P14867 32879488
    576957 6x3u:D (3.5) BS02 FYP ? GO:0004888 ... P14867 32879488 BindingDB: Ki=0.49nM
    576958 6x3u:E (3.5) BS01 MAN ? GO:0004888 ... P18507 32879488
    576959 6x3u:E (3.5) BS02 FYP ? GO:0004888 ... P18507 32879488
    576960 6x3v:A (3.5) BS01 ABU ? GO:0004888 ... P47870 32879488
    576961 6x3v:A (3.5) BS02 V8D ? GO:0004888 ... P47870 32879488
    576962 6x3v:C (3.5) BS01 ABU ? GO:0004888 ... P47870 32879488
    576963 6x3v:C (3.5) BS02 V8D ? GO:0004888 ... P47870 32879488
    576964 6x3v:D (3.5) BS01 MAN ? GO:0004888 ... P14867 32879488
    576965 6x3v:D (3.5) BS02 V8D ? GO:0004888 ... P14867 32879488 BindingDB: EC50=11000nM
    576966 6x3v:E (3.5) BS01 MAN ? GO:0004888 ... P18507 32879488
    576967 6x3w:A (3.3) BS01 ABU ? N/A P47870 32879488
    576968 6x3w:A (3.3) BS02 UQA ? N/A P47870 32879488
    576969 6x3w:B (3.3) BS01 ABU ? N/A P14867 32879488 BindingDB: Ki=21.37nM, EC50=3802nM
    576970 6x3w:B (3.3) BS02 UQA ? N/A P14867 32879488
    576971 6x3w:C (3.3) BS01 UQA ? N/A P47870 32879488
    576972 6x3w:C (3.3) BS02 ABU ? N/A P47870 32879488
    576973 6x3w:D (3.3) BS01 MAN ? N/A P14867 32879488
    576974 6x3w:D (3.3) BS02 ABU ? N/A P14867 32879488 BindingDB: Ki=21.37nM, EC50=3802nM
    576975 6x3w:E (3.3) BS01 MAN ? N/A P18507 32879488
    576976 6x3w:E (3.3) BS02 UQA ? N/A P18507 32879488
    576977 6x3x:A (2.92) BS01 ABU ? GO:0004888 ... P47870 32879488
    576978 6x3x:A (2.92) BS02 DZP ? GO:0004888 ... P47870 32879488
    576979 6x3x:A (2.92) BS03 DZP ? GO:0004888 ... P47870 32879488
    576980 6x3x:B (2.92) BS01 DZP ? GO:0004888 ... P14867 32879488 BindingDB: Ki=14nM, Kd=36nM, EC50=85nM
    576981 6x3x:C (2.92) BS01 ABU ? GO:0004888 ... P47870 32879488
    576982 6x3x:C (2.92) BS02 DZP ? GO:0004888 ... P47870 32879488
    576983 6x3x:D (2.92) BS01 MAN ? GO:0004888 ... P14867 32879488
    576984 6x3x:D (2.92) BS02 ABU ? GO:0004888 ... P14867 32879488 BindingDB: Ki=21.37nM, EC50=3802nM
    576985 6x3x:D (2.92) BS03 DZP ? GO:0004888 ... P14867 32879488 BindingDB: Ki=14nM, Kd=36nM, EC50=85nM
    576986 6x3x:D (2.92) BS04 DZP ? GO:0004888 ... P14867 32879488 BindingDB: Ki=14nM, Kd=36nM, EC50=85nM
    576987 6x3x:E (2.92) BS01 MAN ? GO:0004888 ... P18507 32879488
    576988 6x3x:E (2.92) BS02 DZP ? GO:0004888 ... P18507 32879488
    576989 6x3x:E (2.92) BS03 DZP ? GO:0004888 ... P18507 32879488
    576990 6x3y:A (1.4) BS01 UMM 5.2.1.8 GO:0000413 ... P62937 32539379 MOAD: Kd=10000nM
    576991 6x3z:A (3.23) BS01 ABU ? GO:0004888 ... P47870 32879488
    576992 6x3z:B (3.23) BS01 ABU ? GO:0004888 ... P14867 32879488 BindingDB: Ki=21.37nM, EC50=3802nM
    576993 6x3z:C (3.23) BS01 ABU ? GO:0004888 ... P47870 32879488
    576994 6x3z:D (3.23) BS01 MAN ? GO:0004888 ... P14867 32879488
    576995 6x3z:D (3.23) BS02 ABU ? GO:0004888 ... P14867 32879488 BindingDB: Ki=21.37nM, EC50=3802nM
    576996 6x3z:E (3.23) BS01 MAN ? GO:0004888 ... P18507 32879488
    576997 6x40:A (2.86) BS01 ABU ? GO:0004888 ... P47870 32879488
    576998 6x40:B (2.86) BS01 ABU ? GO:0004888 ... P14867 32879488 BindingDB: Ki=21.37nM, EC50=3802nM
    576999 6x40:C (2.86) BS01 ABU ? GO:0004888 ... P47870 32879488
    577000 6x40:C (2.86) BS02 RI5 ? GO:0004888 ... P47870 32879488

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).