SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    577201 6x5v:A (1.6) BS02 CA ? N/A A1YIY3 N/A
    577202 6x5v:A (1.6) BS03 CA ? N/A A1YIY3 N/A
    577203 6x5v:A (1.6) BS04 CA ? N/A A1YIY3 N/A
    577204 6x5v:A (1.6) BS05 CA ? N/A A1YIY3 N/A
    577205 6x5v:A (1.6) BS06 CA ? N/A A1YIY3 N/A
    577206 6x5v:A (1.6) BS07 CA ? N/A A1YIY3 N/A
    577207 6x5v:A (1.6) BS08 CA ? N/A A1YIY3 N/A
    577208 6x5v:A (1.6) BS09 CA ? N/A A1YIY3 N/A
    577209 6x5v:A (1.6) BS10 CA ? N/A A1YIY3 N/A
    577210 6x5v:A (1.6) BS11 CA ? N/A A1YIY3 N/A
    577211 6x5v:A (1.6) BS12 CA ? N/A A1YIY3 N/A
    577212 6x5v:A (1.6) BS13 CA ? N/A A1YIY3 N/A
    577213 6x5v:A (1.6) BS14 CA ? N/A A1YIY3 N/A
    577214 6x5v:A (1.6) BS15 CA ? N/A A1YIY3 N/A
    577215 6x5v:A (1.6) BS16 CA ? N/A A1YIY3 N/A
    577216 6x5v:A (1.6) BS17 CA ? N/A A1YIY3 N/A
    577217 6x5w:A (1.8) BS01 peptide ? N/A A1YIY3 N/A
    577218 6x5w:A (1.8) BS02 CA ? N/A A1YIY3 N/A
    577219 6x5w:A (1.8) BS03 CA ? N/A A1YIY3 N/A
    577220 6x5w:A (1.8) BS04 CA ? N/A A1YIY3 N/A
    577221 6x5w:A (1.8) BS05 CA ? N/A A1YIY3 N/A
    577222 6x5w:A (1.8) BS06 CA ? N/A A1YIY3 N/A
    577223 6x5w:A (1.8) BS07 CA ? N/A A1YIY3 N/A
    577224 6x5w:A (1.8) BS08 CA ? N/A A1YIY3 N/A
    577225 6x5w:A (1.8) BS09 CA ? N/A A1YIY3 N/A
    577226 6x5w:A (1.8) BS10 CA ? N/A A1YIY3 N/A
    577227 6x5w:A (1.8) BS11 CA ? N/A A1YIY3 N/A
    577228 6x5w:A (1.8) BS12 CA ? N/A A1YIY3 N/A
    577229 6x5w:A (1.8) BS13 CA ? N/A A1YIY3 N/A
    577230 6x5w:A (1.8) BS14 CA ? N/A A1YIY3 N/A
    577231 6x5w:A (1.8) BS15 CA ? N/A A1YIY3 N/A
    577232 6x5w:A (1.8) BS16 CA ? N/A A1YIY3 N/A
    577233 6x5x:A (1.92) BS01 CA 3.4.24.- GO:0004222 ... P0DQT6 32946987
    577234 6x5x:A (1.92) BS02 ZN 3.4.24.- GO:0004222 ... P0DQT6 32946987
    577235 6x5y:A (2.65) BS01 URJ 1.13.11.52 GO:0002376 ... P14902 N/A
    577236 6x5y:B (2.65) BS01 URJ 1.13.11.52 GO:0002376 ... P14902 N/A
    577237 6x5z:A (4.24) BS01 ADP 3.6.4.- GO:0001725 ... P68139 32730789
    577238 6x5z:A (4.24) BS02 MG 3.6.4.- GO:0001725 ... P68139 32730789
    577239 6x5z:B (4.24) BS01 ADP 3.6.4.- GO:0001725 ... P68139 32730789
    577240 6x5z:B (4.24) BS02 MG 3.6.4.- GO:0001725 ... P68139 32730789
    577241 6x5z:C (4.24) BS01 ADP 3.6.4.- GO:0001725 ... P68139 32730789
    577242 6x5z:C (4.24) BS02 MG 3.6.4.- GO:0001725 ... P68139 32730789
    577243 6x67:C (3.47) BS01 dna ? N/A Q283G1 N/A
    577244 6x67:C (3.47) BS02 dna ? N/A Q283G1 N/A
    577245 6x67:C (3.47) BS03 dna ? N/A Q283G1 N/A
    577246 6x67:C (3.47) BS04 dna ? N/A Q283G1 N/A
    577247 6x67:C (3.47) BS05 ZN ? N/A Q283G1 N/A
    577248 6x67:C (3.47) BS06 ZN ? N/A Q283G1 N/A
    577249 6x67:C (3.47) BS07 CA ? N/A Q283G1 N/A
    577250 6x67:C (3.47) BS08 CA ? N/A Q283G1 N/A
    577251 6x67:D (3.47) BS01 dna ? N/A Q283G1 N/A
    577252 6x67:D (3.47) BS02 dna ? N/A Q283G1 N/A
    577253 6x67:D (3.47) BS03 dna ? N/A Q283G1 N/A
    577254 6x67:D (3.47) BS04 dna ? N/A Q283G1 N/A
    577255 6x67:D (3.47) BS05 ZN ? N/A Q283G1 N/A
    577256 6x67:D (3.47) BS06 ZN ? N/A Q283G1 N/A
    577257 6x67:D (3.47) BS07 CA ? N/A Q283G1 N/A
    577258 6x67:D (3.47) BS08 CA ? N/A Q283G1 N/A
    577259 6x68:C (3.66) BS01 dna ? N/A Q283G1 N/A
    577260 6x68:C (3.66) BS02 dna ? N/A Q283G1 N/A
    577261 6x68:C (3.66) BS03 CA ? N/A Q283G1 N/A
    577262 6x68:C (3.66) BS04 ZN ? N/A Q283G1 N/A
    577263 6x68:C (3.66) BS05 ZN ? N/A Q283G1 N/A
    577264 6x68:D (3.66) BS01 dna ? N/A Q283G1 N/A
    577265 6x68:D (3.66) BS02 dna ? N/A Q283G1 N/A
    577266 6x68:D (3.66) BS03 ZN ? N/A Q283G1 N/A
    577267 6x68:D (3.66) BS04 ZN ? N/A Q283G1 N/A
    577268 6x68:D (3.66) BS05 CA ? N/A Q283G1 N/A
    577269 6x6c:A (2.9) BS01 GK2 3.4.14.5 GO:0004177 ... Q86TI2 33731932
    577270 6x6c:D (2.9) BS01 GK2 3.4.14.5 GO:0004177 ... Q86TI2 33731932
    577271 6x6d:A (2.48) BS01 dna ? GO:0003700 ... P04150 34289059
    577272 6x6d:A (2.48) BS02 dna ? GO:0003700 ... P04150 34289059
    577273 6x6d:A (2.48) BS03 ZN ? GO:0003700 ... P04150 34289059
    577274 6x6d:A (2.48) BS04 ZN ? GO:0003700 ... P04150 34289059
    577275 6x6d:B (2.48) BS01 dna ? GO:0003700 ... P04150 34289059
    577276 6x6d:B (2.48) BS02 dna ? GO:0003700 ... P04150 34289059
    577277 6x6d:B (2.48) BS03 ZN ? GO:0003700 ... P04150 34289059
    577278 6x6d:B (2.48) BS04 ZN ? GO:0003700 ... P04150 34289059
    577279 6x6e:A (2.0) BS01 dna ? GO:0003700 ... P04150 34289059
    577280 6x6e:A (2.0) BS02 dna ? GO:0003700 ... P04150 34289059
    577281 6x6e:A (2.0) BS03 ZN ? GO:0003700 ... P04150 34289059
    577282 6x6e:A (2.0) BS04 ZN ? GO:0003700 ... P04150 34289059
    577283 6x6e:B (2.0) BS01 dna ? GO:0003700 ... P04150 34289059
    577284 6x6e:B (2.0) BS02 dna ? GO:0003700 ... P04150 34289059
    577285 6x6e:B (2.0) BS03 ZN ? GO:0003700 ... P04150 34289059
    577286 6x6e:B (2.0) BS04 ZN ? GO:0003700 ... P04150 34289059
    577287 6x6g:AAA (2.15) BS01 USS 2.3.1.- GO:0005576 ... P9WFK7 N/A
    577288 6x6h:A1 (1.88) BS01 peptide 3.2.2.22 GO:0017148 ... A9ZMR8 32878986
    577289 6x6i:AAA (1.904) BS01 USG 2.3.1.- GO:0005576 ... P9WFK7 N/A
    577290 6x6m:A (1.9) BS01 peptide ? N/A A1YIY3 N/A
    577291 6x6m:A (1.9) BS02 CA ? N/A A1YIY3 N/A
    577292 6x6m:A (1.9) BS03 CA ? N/A A1YIY3 N/A
    577293 6x6m:A (1.9) BS04 CA ? N/A A1YIY3 N/A
    577294 6x6m:A (1.9) BS05 CA ? N/A A1YIY3 N/A
    577295 6x6m:A (1.9) BS06 CA ? N/A A1YIY3 N/A
    577296 6x6m:A (1.9) BS07 CA ? N/A A1YIY3 N/A
    577297 6x6m:A (1.9) BS08 CA ? N/A A1YIY3 N/A
    577298 6x6m:A (1.9) BS09 CA ? N/A A1YIY3 N/A
    577299 6x6m:A (1.9) BS10 CA ? N/A A1YIY3 N/A
    577300 6x6m:A (1.9) BS11 CA ? N/A A1YIY3 N/A
    577301 6x6m:A (1.9) BS12 CA ? N/A A1YIY3 N/A
    577302 6x6m:A (1.9) BS13 CA ? N/A A1YIY3 N/A
    577303 6x6m:A (1.9) BS14 CA ? N/A A1YIY3 N/A
    577304 6x6m:A (1.9) BS15 CA ? N/A A1YIY3 N/A
    577305 6x6q:A (2.17) BS01 peptide ? N/A A1YIY3 N/A
    577306 6x6q:A (2.17) BS02 CA ? N/A A1YIY3 N/A
    577307 6x6q:A (2.17) BS03 CA ? N/A A1YIY3 N/A
    577308 6x6q:A (2.17) BS04 CA ? N/A A1YIY3 N/A
    577309 6x6q:A (2.17) BS05 CA ? N/A A1YIY3 N/A
    577310 6x6q:A (2.17) BS06 CA ? N/A A1YIY3 N/A
    577311 6x6q:A (2.17) BS07 CA ? N/A A1YIY3 N/A
    577312 6x6q:A (2.17) BS08 CA ? N/A A1YIY3 N/A
    577313 6x6q:A (2.17) BS09 CA ? N/A A1YIY3 N/A
    577314 6x6q:A (2.17) BS10 CA ? N/A A1YIY3 N/A
    577315 6x6q:A (2.17) BS11 CA ? N/A A1YIY3 N/A
    577316 6x6q:A (2.17) BS12 CA ? N/A A1YIY3 N/A
    577317 6x6q:A (2.17) BS13 CA ? N/A A1YIY3 N/A
    577318 6x6q:A (2.17) BS14 CA ? N/A A1YIY3 N/A
    577319 6x6q:A (2.17) BS15 CA ? N/A A1YIY3 N/A
    577320 6x6r:A (2.02) BS01 4CT ? GO:0005576 ... F5B5W8 N/A
    577321 6x6r:B (2.02) BS01 AR6 ? GO:0005576 ... F5B5W8 N/A
    577322 6x6r:B (2.02) BS02 4CT ? GO:0005576 ... F5B5W8 N/A
    577323 6x6t:0 (3.2) BS01 rna ? GO:0002181 ... P0AG48 32820061
    577324 6x6t:1 (3.2) BS01 rna ? GO:0002181 ... P61175 32820061
    577325 6x6t:2 (3.2) BS01 rna ? GO:0000027 ... P0ADZ0 32820061
    577326 6x6t:3 (3.2) BS01 rna ? GO:0000027 ... P60624 32820061
    577327 6x6t:4 (3.2) BS01 rna ? GO:0000027 ... P68919 32820061
    577328 6x6t:9 (3.2) BS01 rna ? GO:0002181 ... P0A7J3 32820061
    577329 6x6t:AA (3.2) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 32820061
    577330 6x6t:AA (3.2) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 32820061
    577331 6x6t:AA (3.2) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 32820061
    577332 6x6t:AB (3.2) BS01 dna ? GO:0005515 ... P0AFG0 32820061
    577333 6x6t:AB (3.2) BS02 rna ? GO:0005515 ... P0AFG0 32820061
    577334 6x6t:AE (3.2) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577335 6x6t:AE (3.2) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577336 6x6t:AE (3.2) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577337 6x6t:AE (3.2) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577338 6x6t:AE (3.2) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577339 6x6t:AE (3.2) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577340 6x6t:C (3.2) BS01 rna ? GO:0002181 ... P0A7T7 32820061
    577341 6x6t:E (3.2) BS01 rna ? GO:0000028 ... P0A7U7 32820061
    577342 6x6t:F (3.2) BS01 rna ? GO:0000028 ... P68679 32820061
    577343 6x6t:G (3.2) BS01 rna ? GO:0000028 ... P0A7V0 32820061
    577344 6x6t:I (3.2) BS01 rna ? GO:0000028 ... P0A7V3 32820061
    577345 6x6t:I (3.2) BS02 rna ? GO:0000028 ... P0A7V3 32820061
    577346 6x6t:J (3.2) BS01 rna ? GO:0000028 ... P0A7V8 32820061
    577347 6x6t:K (3.2) BS01 rna ? GO:0000028 ... P0A7W1 32820061
    577348 6x6t:K (3.2) BS02 rna ? GO:0000028 ... P0A7W1 32820061
    577349 6x6t:L (3.2) BS01 rna ? GO:0002181 ... P02358 32820061
    577350 6x6t:M (3.2) BS01 rna ? GO:0000028 ... P02359 32820061
    577351 6x6t:M (3.2) BS02 rna ? GO:0000028 ... P02359 32820061
    577352 6x6t:N (3.2) BS01 rna ? GO:0000028 ... P0A7W7 32820061
    577353 6x6t:O (3.2) BS01 rna ? GO:0000049 ... P0A7X3 32820061
    577354 6x6t:P (3.2) BS01 rna ? GO:0000049 ... P0A7R5 32820061
    577355 6x6t:Q (3.2) BS01 rna ? GO:0002181 ... P0A7R9 32820061
    577356 6x6t:R (3.2) BS01 rna ? GO:0000049 ... P0A7S3 32820061
    577357 6x6t:S (3.2) BS01 rna ? GO:0000028 ... P0AG59 32820061
    577358 6x6t:T (3.2) BS01 rna ? GO:0000028 ... P0ADZ4 32820061
    577359 6x6t:T (3.2) BS02 rna ? GO:0000028 ... P0ADZ4 32820061
    577360 6x6t:U (3.2) BS01 rna ? GO:0000028 ... P0A7T3 32820061
    577361 6x6t:V (3.2) BS01 rna ? GO:0000028 ... P0AG63 32820061
    577362 6x6t:W (3.2) BS01 rna ? GO:0000028 ... P0A7U3 32820061
    577363 6x6t:X (3.2) BS01 rna ? GO:0000049 ... P0A7S9 32820061
    577364 6x6t:X (3.2) BS02 rna ? GO:0000049 ... P0A7S9 32820061
    577365 6x6t:b (3.2) BS01 rna ? GO:0000027 ... P0A7L8 32820061
    577366 6x6t:b (3.2) BS02 rna ? GO:0000027 ... P0A7L8 32820061
    577367 6x6t:c (3.2) BS01 rna ? GO:0000027 ... P0A7M2 32820061
    577368 6x6t:e (3.2) BS01 rna ? GO:0000027 ... P0A7M6 32820061
    577369 6x6t:f (3.2) BS01 rna ? GO:0000027 ... P0AG51 32820061
    577370 6x6t:f (3.2) BS02 rna ? GO:0000027 ... P0AG51 32820061
    577371 6x6t:g (3.2) BS01 rna ? GO:0002181 ... P0A7M9 32820061
    577372 6x6t:h (3.2) BS01 rna ? GO:0000027 ... P60422 32820061
    577373 6x6t:i (3.2) BS01 rna ? GO:0000027 ... P0A7N4 32820061
    577374 6x6t:j (3.2) BS01 rna ? GO:0000027 ... P60438 32820061
    577375 6x6t:k (3.2) BS01 rna ? GO:0000027 ... P0A7N9 32820061
    577376 6x6t:l (3.2) BS01 rna ? GO:0001070 ... P60723 32820061
    577377 6x6t:m (3.2) BS01 rna ? GO:0002181 ... P0A7P5 32820061
    577378 6x6t:n (3.2) BS01 rna ? GO:0000027 ... P62399 32820061
    577379 6x6t:n (3.2) BS02 rna ? GO:0000027 ... P62399 32820061
    577380 6x6t:o (3.2) BS01 rna ? GO:0002181 ... P0A7Q1 32820061
    577381 6x6t:p (3.2) BS01 rna ? GO:0000027 ... P0AG55 32820061
    577382 6x6t:q (3.2) BS01 rna ? GO:0002181 ... P0A7Q6 32820061
    577383 6x6t:r (3.2) BS01 rna ? GO:0002181 ... P0A7R1 32820061
    577384 6x6t:s (3.2) BS01 rna ? GO:0002181 ... P0AA10 32820061
    577385 6x6t:t (3.2) BS01 rna ? GO:0002181 ... P0ADY3 32820061
    577386 6x6t:t (3.2) BS02 rna ? GO:0002181 ... P0ADY3 32820061
    577387 6x6t:u (3.2) BS01 rna ? GO:0002181 ... P02413 32820061
    577388 6x6t:v (3.2) BS01 rna ? GO:0000027 ... P0ADY7 32820061
    577389 6x6t:v (3.2) BS02 rna ? GO:0000027 ... P0ADY7 32820061
    577390 6x6t:w (3.2) BS01 rna ? GO:0000027 ... P0AG44 32820061
    577391 6x6t:x (3.2) BS01 rna ? GO:0002181 ... P0C018 32820061
    577392 6x6t:x (3.2) BS02 rna ? GO:0002181 ... P0C018 32820061
    577393 6x6t:y (3.2) BS01 rna ? GO:0000027 ... P0A7K6 32820061
    577394 6x6t:z (3.2) BS01 rna ? GO:0000027 ... P0A7L3 32820061
    577395 6x6u:A (1.944) BS01 PTE 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    577396 6x6u:A (1.944) BS02 SF4 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    577397 6x6u:A (1.944) BS03 MG 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    577398 6x6u:A (1.944) BS04 PO4 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    577399 6x6u:A (1.944) BS05 PO4 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    577400 6x6u:A (1.944) BS06 PO4 1.2.7.5 GO:0009055 ... I6V2C3 36269456

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).