SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    577401 6x6u:B (1.944) BS01 PO4 ? GO:0016491 ... I6U881 36269456
    577402 6x6u:B (1.944) BS02 SF4 ? GO:0016491 ... I6U881 36269456
    577403 6x6u:B (1.944) BS03 SF4 ? GO:0016491 ... I6U881 36269456
    577404 6x6u:B (1.944) BS04 SF4 ? GO:0016491 ... I6U881 36269456
    577405 6x6u:B (1.944) BS05 SF4 ? GO:0016491 ... I6U881 36269456
    577406 6x6u:B (1.944) BS06 PO4 ? GO:0016491 ... I6U881 36269456
    577407 6x6u:C (1.944) BS01 PTE 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    577408 6x6u:C (1.944) BS02 SF4 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    577409 6x6u:C (1.944) BS03 MG 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    577410 6x6u:C (1.944) BS04 PO4 1.2.7.5 GO:0009055 ... I6V2C3 36269456
    577411 6x6u:D (1.944) BS01 PO4 ? GO:0016491 ... I6U881 36269456
    577412 6x6u:D (1.944) BS02 SF4 ? GO:0016491 ... I6U881 36269456
    577413 6x6u:D (1.944) BS03 SF4 ? GO:0016491 ... I6U881 36269456
    577414 6x6u:D (1.944) BS04 SF4 ? GO:0016491 ... I6U881 36269456
    577415 6x6u:D (1.944) BS05 SF4 ? GO:0016491 ... I6U881 36269456
    577416 6x6v:A (2.42) BS01 NDP ? GO:0000166 ... Q9KH42 N/A
    577417 6x6v:B (2.42) BS01 NDP ? GO:0000166 ... Q9KH42 N/A
    577418 6x6v:C (2.42) BS01 NDP ? GO:0000166 ... Q9KH42 N/A
    577419 6x6v:D (2.42) BS01 NDP ? GO:0000166 ... Q9KH42 N/A
    577420 6x6x:A (1.71) BS01 ZN ? GO:0000166 ... Q9KH42 N/A
    577421 6x6x:A (1.71) BS02 UTG ? GO:0000166 ... Q9KH42 N/A
    577422 6x6x:B (1.71) BS01 ZN ? GO:0000166 ... Q9KH42 N/A
    577423 6x6x:B (1.71) BS02 ZN ? GO:0000166 ... Q9KH42 N/A
    577424 6x6y:AAA (2.5) BS01 USY 2.3.1.- GO:0005576 ... P9WFK7 N/A
    577425 6x6z:A (1.4) BS01 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577426 6x6z:A (1.4) BS02 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577427 6x6z:A (1.4) BS03 CA 2.7.7.- GO:0003684 ... P12689 32999062
    577428 6x6z:A (1.4) BS04 CA 2.7.7.- GO:0003684 ... P12689 32999062
    577429 6x6z:A (1.4) BS05 DCP 2.7.7.- GO:0003684 ... P12689 32999062
    577430 6x6z:A (1.4) BS06 CA 2.7.7.- GO:0003684 ... P12689 32999062
    577431 6x70:A (2.05) BS01 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577432 6x70:A (2.05) BS02 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577433 6x70:A (2.05) BS03 MG 2.7.7.- GO:0003684 ... P12689 32999062
    577434 6x71:A (1.78) BS01 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577435 6x71:A (1.78) BS02 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577436 6x71:A (1.78) BS03 MG 2.7.7.- GO:0003684 ... P12689 32999062
    577437 6x71:A (1.78) BS04 MG 2.7.7.- GO:0003684 ... P12689 32999062
    577438 6x71:A (1.78) BS05 MG 2.7.7.- GO:0003684 ... P12689 32999062
    577439 6x71:A (1.78) BS06 DCP 2.7.7.- GO:0003684 ... P12689 32999062
    577440 6x71:A (1.78) BS07 POP 2.7.7.- GO:0003684 ... P12689 32999062
    577441 6x72:A (2.19) BS01 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577442 6x72:A (2.19) BS02 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577443 6x72:A (2.19) BS03 PO4 2.7.7.- GO:0003684 ... P12689 32999062
    577444 6x72:A (2.19) BS04 PO4 2.7.7.- GO:0003684 ... P12689 32999062
    577445 6x72:A (2.19) BS05 MG 2.7.7.- GO:0003684 ... P12689 32999062
    577446 6x73:A (2.05) BS01 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577447 6x73:A (2.05) BS02 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577448 6x73:A (2.05) BS03 MG 2.7.7.- GO:0003684 ... P12689 32999062
    577449 6x73:A (2.05) BS04 PO4 2.7.7.- GO:0003684 ... P12689 32999062
    577450 6x74:A (1.69) BS01 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577451 6x74:A (1.69) BS02 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577452 6x74:A (1.69) BS03 MG 2.7.7.- GO:0003684 ... P12689 32999062
    577453 6x75:A (1.95) BS01 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577454 6x75:A (1.95) BS02 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577455 6x75:A (1.95) BS03 MN 2.7.7.- GO:0003684 ... P12689 32999062
    577456 6x75:A (1.95) BS04 MN 2.7.7.- GO:0003684 ... P12689 32999062
    577457 6x75:A (1.95) BS05 MN 2.7.7.- GO:0003684 ... P12689 32999062
    577458 6x75:A (1.95) BS06 DCP 2.7.7.- GO:0003684 ... P12689 32999062
    577459 6x76:A (2.53) BS01 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577460 6x76:A (2.53) BS02 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577461 6x76:A (2.53) BS03 MN 2.7.7.- GO:0003684 ... P12689 32999062
    577462 6x76:A (2.53) BS04 MN 2.7.7.- GO:0003684 ... P12689 32999062
    577463 6x76:A (2.53) BS05 MN 2.7.7.- GO:0003684 ... P12689 32999062
    577464 6x76:A (2.53) BS06 DCP 2.7.7.- GO:0003684 ... P12689 32999062
    577465 6x77:A (1.64) BS01 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577466 6x77:A (1.64) BS02 dna 2.7.7.- GO:0003684 ... P12689 32999062
    577467 6x77:A (1.64) BS03 CA 2.7.7.- GO:0003684 ... P12689 32999062
    577468 6x77:A (1.64) BS04 CA 2.7.7.- GO:0003684 ... P12689 32999062
    577469 6x77:A (1.64) BS05 CA 2.7.7.- GO:0003684 ... P12689 32999062
    577470 6x77:A (1.64) BS06 DCP 2.7.7.- GO:0003684 ... P12689 32999062
    577471 6x78:A (2.359) BS01 peptide N/A N/A N/A N/A
    577472 6x78:B (2.359) BS01 peptide N/A N/A N/A N/A
    577473 6x78:H (2.359) BS01 peptide N/A N/A N/A N/A
    577474 6x78:L (2.359) BS01 peptide N/A N/A N/A N/A
    577475 6x7a:AAA (2.08) BS01 UTD 2.3.1.- GO:0005576 ... P9WFK7 N/A
    577476 6x7b:A (1.951) BS01 ZVP ? N/A O60885 32694708 MOAD: ic50=27nM
    577477 6x7b:B (1.951) BS01 ZVP ? N/A O60885 32694708 MOAD: ic50=27nM
    577478 6x7c:A (2.7) BS01 KV9 ? N/A O60885 32694708
    577479 6x7d:A (2.5) BS01 UT4 ? N/A O60885 32694708 MOAD: ic50=388nM
    577480 6x7d:B (2.5) BS01 UT4 ? N/A O60885 32694708 MOAD: ic50=388nM
    577481 6x7e:A (1.9987) BS01 HEC ? GO:0005506 ... P0ABE7 32830423
    577482 6x7e:A (1.9987) BS02 CO ? GO:0005506 ... P0ABE7 32830423
    577483 6x7e:B (1.9987) BS01 CO ? GO:0005506 ... P0ABE7 32830423
    577484 6x7e:B (1.9987) BS02 HEC ? GO:0005506 ... P0ABE7 32830423
    577485 6x7e:C (1.9987) BS01 CO ? GO:0005506 ... P0ABE7 32830423
    577486 6x7e:C (1.9987) BS02 HEC ? GO:0005506 ... P0ABE7 32830423
    577487 6x7f:0 (3.5) BS01 rna ? GO:0002181 ... P0AG48 32820061
    577488 6x7f:1 (3.5) BS01 rna ? GO:0002181 ... P61175 32820061
    577489 6x7f:2 (3.5) BS01 rna ? GO:0000027 ... P0ADZ0 32820061
    577490 6x7f:3 (3.5) BS01 rna ? GO:0000027 ... P60624 32820061
    577491 6x7f:4 (3.5) BS01 rna ? GO:0000027 ... P68919 32820061
    577492 6x7f:9 (3.5) BS01 rna ? GO:0002181 ... P0A7J3 32820061
    577493 6x7f:AA (3.5) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 32820061
    577494 6x7f:AA (3.5) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 32820061
    577495 6x7f:AA (3.5) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 32820061
    577496 6x7f:AB (3.5) BS01 dna ? GO:0005515 ... P0AFG0 32820061
    577497 6x7f:AE (3.5) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577498 6x7f:AE (3.5) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577499 6x7f:AE (3.5) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577500 6x7f:AE (3.5) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577501 6x7f:AE (3.5) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577502 6x7f:AE (3.5) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577503 6x7f:C (3.5) BS01 rna ? GO:0002181 ... P0A7T7 32820061
    577504 6x7f:E (3.5) BS01 rna ? GO:0000028 ... P0A7U7 32820061
    577505 6x7f:F (3.5) BS01 rna ? GO:0000028 ... P68679 32820061
    577506 6x7f:G (3.5) BS01 rna ? GO:0000028 ... P0A7V0 32820061
    577507 6x7f:I (3.5) BS01 rna ? GO:0000028 ... P0A7V3 32820061
    577508 6x7f:I (3.5) BS02 rna ? GO:0000028 ... P0A7V3 32820061
    577509 6x7f:J (3.5) BS01 rna ? GO:0000028 ... P0A7V8 32820061
    577510 6x7f:K (3.5) BS01 rna ? GO:0000028 ... P0A7W1 32820061
    577511 6x7f:K (3.5) BS02 rna ? GO:0000028 ... P0A7W1 32820061
    577512 6x7f:L (3.5) BS01 rna ? GO:0002181 ... P02358 32820061
    577513 6x7f:M (3.5) BS01 rna ? GO:0000028 ... P02359 32820061
    577514 6x7f:M (3.5) BS02 rna ? GO:0000028 ... P02359 32820061
    577515 6x7f:N (3.5) BS01 rna ? GO:0000028 ... P0A7W7 32820061
    577516 6x7f:O (3.5) BS01 rna ? GO:0000049 ... P0A7X3 32820061
    577517 6x7f:P (3.5) BS01 rna ? GO:0000049 ... P0A7R5 32820061
    577518 6x7f:Q (3.5) BS01 rna ? GO:0002181 ... P0A7R9 32820061
    577519 6x7f:R (3.5) BS01 rna ? GO:0000049 ... P0A7S3 32820061
    577520 6x7f:S (3.5) BS01 rna ? GO:0000028 ... P0AG59 32820061
    577521 6x7f:T (3.5) BS01 rna ? GO:0000028 ... P0ADZ4 32820061
    577522 6x7f:T (3.5) BS02 rna ? GO:0000028 ... P0ADZ4 32820061
    577523 6x7f:U (3.5) BS01 rna ? GO:0000028 ... P0A7T3 32820061
    577524 6x7f:V (3.5) BS01 rna ? GO:0000028 ... P0AG63 32820061
    577525 6x7f:W (3.5) BS01 rna ? GO:0000028 ... P0A7U3 32820061
    577526 6x7f:X (3.5) BS01 rna ? GO:0000049 ... P0A7S9 32820061
    577527 6x7f:X (3.5) BS02 rna ? GO:0000049 ... P0A7S9 32820061
    577528 6x7f:b (3.5) BS01 rna ? GO:0000027 ... P0A7L8 32820061
    577529 6x7f:b (3.5) BS02 rna ? GO:0000027 ... P0A7L8 32820061
    577530 6x7f:c (3.5) BS01 rna ? GO:0000027 ... P0A7M2 32820061
    577531 6x7f:e (3.5) BS01 rna ? GO:0000027 ... P0A7M6 32820061
    577532 6x7f:f (3.5) BS01 rna ? GO:0000027 ... P0AG51 32820061
    577533 6x7f:f (3.5) BS02 rna ? GO:0000027 ... P0AG51 32820061
    577534 6x7f:g (3.5) BS01 rna ? GO:0002181 ... P0A7M9 32820061
    577535 6x7f:h (3.5) BS01 rna ? GO:0000027 ... P60422 32820061
    577536 6x7f:i (3.5) BS01 rna ? GO:0000027 ... P0A7N4 32820061
    577537 6x7f:j (3.5) BS01 rna ? GO:0000027 ... P60438 32820061
    577538 6x7f:k (3.5) BS01 rna ? GO:0000027 ... P0A7N9 32820061
    577539 6x7f:l (3.5) BS01 rna ? GO:0001070 ... P60723 32820061
    577540 6x7f:m (3.5) BS01 rna ? GO:0002181 ... P0A7P5 32820061
    577541 6x7f:n (3.5) BS01 rna ? GO:0000027 ... P62399 32820061
    577542 6x7f:n (3.5) BS02 rna ? GO:0000027 ... P62399 32820061
    577543 6x7f:o (3.5) BS01 rna ? GO:0002181 ... P0A7Q1 32820061
    577544 6x7f:p (3.5) BS01 rna ? GO:0000027 ... P0AG55 32820061
    577545 6x7f:q (3.5) BS01 rna ? GO:0002181 ... P0A7Q6 32820061
    577546 6x7f:r (3.5) BS01 rna ? GO:0002181 ... P0A7R1 32820061
    577547 6x7f:s (3.5) BS01 rna ? GO:0002181 ... P0AA10 32820061
    577548 6x7f:t (3.5) BS01 rna ? GO:0002181 ... P0ADY3 32820061
    577549 6x7f:t (3.5) BS02 rna ? GO:0002181 ... P0ADY3 32820061
    577550 6x7f:u (3.5) BS01 rna ? GO:0002181 ... P02413 32820061
    577551 6x7f:v (3.5) BS01 rna ? GO:0000027 ... P0ADY7 32820061
    577552 6x7f:v (3.5) BS02 rna ? GO:0000027 ... P0ADY7 32820061
    577553 6x7f:w (3.5) BS01 rna ? GO:0000027 ... P0AG44 32820061
    577554 6x7f:x (3.5) BS01 rna ? GO:0002181 ... P0C018 32820061
    577555 6x7f:x (3.5) BS02 rna ? GO:0002181 ... P0C018 32820061
    577556 6x7f:y (3.5) BS01 rna ? GO:0000027 ... P0A7K6 32820061
    577557 6x7f:z (3.5) BS01 rna ? GO:0000027 ... P0A7L3 32820061
    577558 6x7h:A (1.25) BS01 MAN ? GO:0030246 ... P81180 36472898
    577559 6x7h:A (1.25) BS02 MAN ? GO:0030246 ... P81180 36472898
    577560 6x7h:B (1.25) BS01 MAN ? GO:0030246 ... P81180 36472898
    577561 6x7h:B (1.25) BS02 MAN ? GO:0030246 ... P81180 36472898
    577562 6x7j:A (0.97) BS01 FUL ? N/A A1YIY3 33824212
    577563 6x7j:A (0.97) BS02 CA ? N/A A1YIY3 33824212
    577564 6x7j:A (0.97) BS03 CA ? N/A A1YIY3 33824212
    577565 6x7j:A (0.97) BS04 CA ? N/A A1YIY3 33824212
    577566 6x7j:A (0.97) BS05 CA ? N/A A1YIY3 33824212
    577567 6x7j:A (0.97) BS06 FUC ? N/A A1YIY3 33824212
    577568 6x7j:A (0.97) BS07 CA ? N/A A1YIY3 33824212
    577569 6x7k:0 (3.1) BS01 rna ? GO:0002181 ... P0AG48 32820061
    577570 6x7k:1 (3.1) BS01 rna ? GO:0002181 ... P61175 32820061
    577571 6x7k:2 (3.1) BS01 rna ? GO:0000027 ... P0ADZ0 32820061
    577572 6x7k:3 (3.1) BS01 rna ? GO:0000027 ... P60624 32820061
    577573 6x7k:4 (3.1) BS01 rna ? GO:0000027 ... P68919 32820061
    577574 6x7k:9 (3.1) BS01 rna ? GO:0002181 ... P0A7J3 32820061
    577575 6x7k:AA (3.1) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 32820061
    577576 6x7k:AA (3.1) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 32820061
    577577 6x7k:AA (3.1) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 32820061
    577578 6x7k:AB (3.1) BS01 dna ? GO:0005515 ... P0AFG0 32820061
    577579 6x7k:AE (3.1) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577580 6x7k:AE (3.1) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577581 6x7k:AE (3.1) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577582 6x7k:AE (3.1) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577583 6x7k:AE (3.1) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577584 6x7k:AE (3.1) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 32820061
    577585 6x7k:C (3.1) BS01 rna ? GO:0002181 ... P0A7T7 32820061
    577586 6x7k:E (3.1) BS01 rna ? GO:0000028 ... P0A7U7 32820061
    577587 6x7k:F (3.1) BS01 rna ? GO:0000028 ... P68679 32820061
    577588 6x7k:G (3.1) BS01 rna ? GO:0000028 ... P0A7V0 32820061
    577589 6x7k:I (3.1) BS01 rna ? GO:0000028 ... P0A7V3 32820061
    577590 6x7k:I (3.1) BS02 rna ? GO:0000028 ... P0A7V3 32820061
    577591 6x7k:J (3.1) BS01 rna ? GO:0000028 ... P0A7V8 32820061
    577592 6x7k:K (3.1) BS01 rna ? GO:0000028 ... P0A7W1 32820061
    577593 6x7k:K (3.1) BS02 rna ? GO:0000028 ... P0A7W1 32820061
    577594 6x7k:L (3.1) BS01 rna ? GO:0002181 ... P02358 32820061
    577595 6x7k:M (3.1) BS01 rna ? GO:0000028 ... P02359 32820061
    577596 6x7k:M (3.1) BS02 rna ? GO:0000028 ... P02359 32820061
    577597 6x7k:N (3.1) BS01 rna ? GO:0000028 ... P0A7W7 32820061
    577598 6x7k:O (3.1) BS01 rna ? GO:0000049 ... P0A7X3 32820061
    577599 6x7k:P (3.1) BS01 rna ? GO:0000049 ... P0A7R5 32820061
    577600 6x7k:Q (3.1) BS01 rna ? GO:0002181 ... P0A7R9 32820061

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).