SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    577601 6x7k:R (3.1) BS01 rna ? GO:0000049 ... P0A7S3 32820061
    577602 6x7k:S (3.1) BS01 rna ? GO:0000028 ... P0AG59 32820061
    577603 6x7k:T (3.1) BS01 rna ? GO:0000028 ... P0ADZ4 32820061
    577604 6x7k:T (3.1) BS02 rna ? GO:0000028 ... P0ADZ4 32820061
    577605 6x7k:U (3.1) BS01 rna ? GO:0000028 ... P0A7T3 32820061
    577606 6x7k:V (3.1) BS01 rna ? GO:0000028 ... P0AG63 32820061
    577607 6x7k:W (3.1) BS01 rna ? GO:0000028 ... P0A7U3 32820061
    577608 6x7k:X (3.1) BS01 rna ? GO:0000049 ... P0A7S9 32820061
    577609 6x7k:X (3.1) BS02 rna ? GO:0000049 ... P0A7S9 32820061
    577610 6x7k:b (3.1) BS01 rna ? GO:0000027 ... P0A7L8 32820061
    577611 6x7k:b (3.1) BS02 rna ? GO:0000027 ... P0A7L8 32820061
    577612 6x7k:c (3.1) BS01 rna ? GO:0000027 ... P0A7M2 32820061
    577613 6x7k:e (3.1) BS01 rna ? GO:0000027 ... P0A7M6 32820061
    577614 6x7k:f (3.1) BS01 rna ? GO:0000027 ... P0AG51 32820061
    577615 6x7k:f (3.1) BS02 rna ? GO:0000027 ... P0AG51 32820061
    577616 6x7k:g (3.1) BS01 rna ? GO:0002181 ... P0A7M9 32820061
    577617 6x7k:h (3.1) BS01 rna ? GO:0000027 ... P60422 32820061
    577618 6x7k:i (3.1) BS01 rna ? GO:0000027 ... P0A7N4 32820061
    577619 6x7k:j (3.1) BS01 rna ? GO:0000027 ... P60438 32820061
    577620 6x7k:k (3.1) BS01 rna ? GO:0000027 ... P0A7N9 32820061
    577621 6x7k:l (3.1) BS01 rna ? GO:0001070 ... P60723 32820061
    577622 6x7k:m (3.1) BS01 rna ? GO:0002181 ... P0A7P5 32820061
    577623 6x7k:n (3.1) BS01 rna ? GO:0000027 ... P62399 32820061
    577624 6x7k:n (3.1) BS02 rna ? GO:0000027 ... P62399 32820061
    577625 6x7k:o (3.1) BS01 rna ? GO:0002181 ... P0A7Q1 32820061
    577626 6x7k:p (3.1) BS01 rna ? GO:0000027 ... P0AG55 32820061
    577627 6x7k:q (3.1) BS01 rna ? GO:0002181 ... P0A7Q6 32820061
    577628 6x7k:r (3.1) BS01 rna ? GO:0002181 ... P0A7R1 32820061
    577629 6x7k:s (3.1) BS01 rna ? GO:0002181 ... P0AA10 32820061
    577630 6x7k:t (3.1) BS01 rna ? GO:0002181 ... P0ADY3 32820061
    577631 6x7k:t (3.1) BS02 rna ? GO:0002181 ... P0ADY3 32820061
    577632 6x7k:u (3.1) BS01 rna ? GO:0002181 ... P02413 32820061
    577633 6x7k:v (3.1) BS01 rna ? GO:0000027 ... P0ADY7 32820061
    577634 6x7k:v (3.1) BS02 rna ? GO:0000027 ... P0ADY7 32820061
    577635 6x7k:w (3.1) BS01 rna ? GO:0000027 ... P0AG44 32820061
    577636 6x7k:x (3.1) BS01 rna ? GO:0002181 ... P0C018 32820061
    577637 6x7k:x (3.1) BS02 rna ? GO:0002181 ... P0C018 32820061
    577638 6x7k:y (3.1) BS01 rna ? GO:0000027 ... P0A7K6 32820061
    577639 6x7k:z (3.1) BS01 rna ? GO:0000027 ... P0A7L3 32820061
    577640 6x7l:A (1.77) BS01 ALA ? GO:0016417 ... Q8GGP1 33482062
    577641 6x7l:A (1.77) BS02 KFV ? GO:0016417 ... Q8GGP1 33482062
    577642 6x7m:A (1.61) BS01 KGA ? GO:0016417 ... Q8GGP1 33482062
    577643 6x7n:A (1.42) BS01 KGJ ? GO:0016417 ... Q8GGP1 33482062
    577644 6x7o:A (1.55) BS01 YXS ? GO:0016417 ... Q8GGP1 33482062
    577645 6x7o:A (1.55) BS02 YXR ? GO:0016417 ... Q8GGP1 33482062
    577646 6x7p:A (1.55) BS01 SO5 ? GO:0016417 ... Q8GGP1 33482062
    577647 6x7p:A (1.55) BS02 LCV ? GO:0016417 ... Q8GGP1 33482062
    577648 6x7q:A (1.68) BS01 UTA 2.3.1.28 GO:0008811 ... P00484 N/A
    577649 6x7q:A (1.68) BS02 ZN 2.3.1.28 GO:0008811 ... P00484 N/A
    577650 6x7q:A (1.68) BS03 CLM 2.3.1.28 GO:0008811 ... P00484 N/A
    577651 6x7q:A (1.68) BS04 CLM 2.3.1.28 GO:0008811 ... P00484 N/A
    577652 6x7q:B (1.68) BS01 UTA 2.3.1.28 GO:0008811 ... P00484 N/A
    577653 6x7q:B (1.68) BS02 CLM 2.3.1.28 GO:0008811 ... P00484 N/A
    577654 6x7q:B (1.68) BS03 UTA 2.3.1.28 GO:0008811 ... P00484 N/A
    577655 6x7q:B (1.68) BS04 CLM 2.3.1.28 GO:0008811 ... P00484 N/A
    577656 6x7q:C (1.68) BS01 CLM 2.3.1.28 GO:0008811 ... P00484 N/A
    577657 6x7q:C (1.68) BS02 UTA 2.3.1.28 GO:0008811 ... P00484 N/A
    577658 6x7q:C (1.68) BS03 CLM 2.3.1.28 GO:0008811 ... P00484 N/A
    577659 6x7q:C (1.68) BS04 UTA 2.3.1.28 GO:0008811 ... P00484 N/A
    577660 6x7q:C (1.68) BS05 ZN 2.3.1.28 GO:0008811 ... P00484 N/A
    577661 6x7r:A (1.35) BS01 UT7 2.3.1.180 GO:0004315 ... P0A6R0 N/A
    577662 6x7t:A (1.0) BS01 CA ? N/A A1YIY3 33824212
    577663 6x7t:A (1.0) BS02 CA ? N/A A1YIY3 33824212
    577664 6x7t:A (1.0) BS03 CA ? N/A A1YIY3 33824212
    577665 6x7t:A (1.0) BS04 CA ? N/A A1YIY3 33824212
    577666 6x7t:A (1.0) BS05 CA ? N/A A1YIY3 33824212
    577667 6x7t:A (1.0) BS06 VDS ? N/A A1YIY3 33824212
    577668 6x7t:A (1.0) BS07 VDV ? N/A A1YIY3 33824212
    577669 6x7u:A (2.7) BS01 FAD 3.6.1.62
    3.6.1.64
    GO:0000166 ... Q96DE0 32432673
    577670 6x7u:A (2.7) BS02 MN 3.6.1.62
    3.6.1.64
    GO:0000166 ... Q96DE0 32432673
    577671 6x7u:A (2.7) BS03 MN 3.6.1.62
    3.6.1.64
    GO:0000166 ... Q96DE0 32432673
    577672 6x7u:C (2.7) BS01 FAD 3.6.1.62
    3.6.1.64
    GO:0000166 ... Q96DE0 32432673
    577673 6x7u:C (2.7) BS02 AMP 3.6.1.62
    3.6.1.64
    GO:0000166 ... Q96DE0 32432673
    577674 6x7u:C (2.7) BS03 MN 3.6.1.62
    3.6.1.64
    GO:0000166 ... Q96DE0 32432673
    577675 6x7v:A (2.3) BS01 MN 3.6.1.62
    3.6.1.64
    GO:0000166 ... Q96DE0 32432673
    577676 6x7w:A (1.7) BS01 peptide N/A N/A N/A N/A
    577677 6x7w:C (1.7) BS01 peptide N/A N/A N/A N/A
    577678 6x7w:H (1.7) BS01 peptide N/A N/A N/A N/A
    577679 6x7w:L (1.7) BS01 peptide N/A N/A N/A N/A
    577680 6x7x:A (1.3) BS01 CA ? N/A A1YIY3 33824212
    577681 6x7x:A (1.3) BS02 CA ? N/A A1YIY3 33824212
    577682 6x7x:A (1.3) BS03 CA ? N/A A1YIY3 33824212
    577683 6x7x:A (1.3) BS04 CA ? N/A A1YIY3 33824212
    577684 6x7x:A (1.3) BS05 CA ? N/A A1YIY3 33824212
    577685 6x7x:A (1.3) BS06 CA ? N/A A1YIY3 33824212
    577686 6x7x:A (1.3) BS07 MAN ? N/A A1YIY3 33824212
    577687 6x7x:A (1.3) BS08 BMA ? N/A A1YIY3 33824212
    577688 6x7y:A (1.0) BS01 CA ? N/A A1YIY3 33824212
    577689 6x7y:A (1.0) BS02 CA ? N/A A1YIY3 33824212
    577690 6x7y:A (1.0) BS03 CA ? N/A A1YIY3 33824212
    577691 6x7y:A (1.0) BS04 CA ? N/A A1YIY3 33824212
    577692 6x7z:A (1.0) BS01 CA ? N/A A1YIY3 33824212
    577693 6x7z:A (1.0) BS02 CA ? N/A A1YIY3 33824212
    577694 6x7z:A (1.0) BS03 CA ? N/A A1YIY3 33824212
    577695 6x7z:A (1.0) BS04 CA ? N/A A1YIY3 33824212
    577696 6x7z:A (1.0) BS05 INS ? N/A A1YIY3 33824212
    577697 6x80:A (3.5) BS01 P8E ? GO:0005198 ... P22251 32641510
    577698 6x80:A (3.5) BS02 P8E ? GO:0005198 ... P22251 32641510
    577699 6x80:A (3.5) BS03 P8E ? GO:0005198 ... P22251 32641510
    577700 6x80:A (3.5) BS04 P8E ? GO:0005198 ... P22251 32641510
    577701 6x80:A (3.5) BS05 P8E ? GO:0005198 ... P22251 32641510
    577702 6x80:A (3.5) BS06 P8E ? GO:0005198 ... P22251 32641510
    577703 6x80:A (3.5) BS07 P8E ? GO:0005198 ... P22251 32641510
    577704 6x80:A (3.5) BS08 P8E ? GO:0005198 ... P22251 32641510
    577705 6x80:A (3.5) BS09 P8E ? GO:0005198 ... P22251 32641510
    577706 6x80:A (3.5) BS10 P8E ? GO:0005198 ... P22251 32641510
    577707 6x80:A (3.5) BS11 P8E ? GO:0005198 ... P22251 32641510
    577708 6x80:A (3.5) BS12 P8E ? GO:0005198 ... P22251 32641510
    577709 6x80:B (3.5) BS01 P8E ? GO:0005198 ... P22251 32641510
    577710 6x80:B (3.5) BS02 P8E ? GO:0005198 ... P22251 32641510
    577711 6x80:B (3.5) BS03 P8E ? GO:0005198 ... P22251 32641510
    577712 6x80:B (3.5) BS04 P8E ? GO:0005198 ... P22251 32641510
    577713 6x80:B (3.5) BS05 P8E ? GO:0005198 ... P22251 32641510
    577714 6x80:B (3.5) BS06 P8E ? GO:0005198 ... P22251 32641510
    577715 6x80:B (3.5) BS07 P8E ? GO:0005198 ... P22251 32641510
    577716 6x80:B (3.5) BS08 P8E ? GO:0005198 ... P22251 32641510
    577717 6x80:B (3.5) BS09 P8E ? GO:0005198 ... P22251 32641510
    577718 6x80:B (3.5) BS10 P8E ? GO:0005198 ... P22251 32641510
    577719 6x80:B (3.5) BS11 P8E ? GO:0005198 ... P22251 32641510
    577720 6x80:C (3.5) BS01 P8E ? GO:0005198 ... P22251 32641510
    577721 6x80:C (3.5) BS02 P8E ? GO:0005198 ... P22251 32641510
    577722 6x80:C (3.5) BS03 P8E ? GO:0005198 ... P22251 32641510
    577723 6x80:C (3.5) BS04 P8E ? GO:0005198 ... P22251 32641510
    577724 6x80:C (3.5) BS05 P8E ? GO:0005198 ... P22251 32641510
    577725 6x80:C (3.5) BS06 P8E ? GO:0005198 ... P22251 32641510
    577726 6x80:C (3.5) BS07 P8E ? GO:0005198 ... P22251 32641510
    577727 6x80:C (3.5) BS08 P8E ? GO:0005198 ... P22251 32641510
    577728 6x80:C (3.5) BS09 P8E ? GO:0005198 ... P22251 32641510
    577729 6x80:C (3.5) BS10 P8E ? GO:0005198 ... P22251 32641510
    577730 6x80:C (3.5) BS11 P8E ? GO:0005198 ... P22251 32641510
    577731 6x80:D (3.5) BS01 P8E ? GO:0005198 ... P22251 32641510
    577732 6x80:D (3.5) BS02 P8E ? GO:0005198 ... P22251 32641510
    577733 6x80:D (3.5) BS03 P8E ? GO:0005198 ... P22251 32641510
    577734 6x80:D (3.5) BS04 P8E ? GO:0005198 ... P22251 32641510
    577735 6x80:D (3.5) BS05 P8E ? GO:0005198 ... P22251 32641510
    577736 6x80:D (3.5) BS06 P8E ? GO:0005198 ... P22251 32641510
    577737 6x80:D (3.5) BS07 P8E ? GO:0005198 ... P22251 32641510
    577738 6x80:D (3.5) BS08 P8E ? GO:0005198 ... P22251 32641510
    577739 6x80:D (3.5) BS09 P8E ? GO:0005198 ... P22251 32641510
    577740 6x80:E (3.5) BS01 P8E ? GO:0005198 ... P22251 32641510
    577741 6x80:E (3.5) BS02 P8E ? GO:0005198 ... P22251 32641510
    577742 6x80:E (3.5) BS03 P8E ? GO:0005198 ... P22251 32641510
    577743 6x80:E (3.5) BS04 P8E ? GO:0005198 ... P22251 32641510
    577744 6x80:E (3.5) BS05 P8E ? GO:0005198 ... P22251 32641510
    577745 6x80:E (3.5) BS06 P8E ? GO:0005198 ... P22251 32641510
    577746 6x80:E (3.5) BS07 P8E ? GO:0005198 ... P22251 32641510
    577747 6x80:E (3.5) BS08 P8E ? GO:0005198 ... P22251 32641510
    577748 6x80:E (3.5) BS09 P8E ? GO:0005198 ... P22251 32641510
    577749 6x80:E (3.5) BS10 P8E ? GO:0005198 ... P22251 32641510
    577750 6x80:E (3.5) BS11 P8E ? GO:0005198 ... P22251 32641510
    577751 6x80:E (3.5) BS12 P8E ? GO:0005198 ... P22251 32641510
    577752 6x80:F (3.5) BS01 P8E ? GO:0005198 ... P22251 32641510
    577753 6x80:F (3.5) BS02 P8E ? GO:0005198 ... P22251 32641510
    577754 6x80:F (3.5) BS03 P8E ? GO:0005198 ... P22251 32641510
    577755 6x80:F (3.5) BS04 P8E ? GO:0005198 ... P22251 32641510
    577756 6x80:F (3.5) BS05 P8E ? GO:0005198 ... P22251 32641510
    577757 6x80:F (3.5) BS06 P8E ? GO:0005198 ... P22251 32641510
    577758 6x80:F (3.5) BS07 P8E ? GO:0005198 ... P22251 32641510
    577759 6x80:F (3.5) BS08 P8E ? GO:0005198 ... P22251 32641510
    577760 6x80:F (3.5) BS09 P8E ? GO:0005198 ... P22251 32641510
    577761 6x80:F (3.5) BS10 P8E ? GO:0005198 ... P22251 32641510
    577762 6x80:F (3.5) BS11 P8E ? GO:0005198 ... P22251 32641510
    577763 6x80:G (3.5) BS01 P8E ? GO:0005198 ... P22251 32641510
    577764 6x80:G (3.5) BS02 P8E ? GO:0005198 ... P22251 32641510
    577765 6x80:G (3.5) BS03 P8E ? GO:0005198 ... P22251 32641510
    577766 6x80:G (3.5) BS04 P8E ? GO:0005198 ... P22251 32641510
    577767 6x80:G (3.5) BS05 P8E ? GO:0005198 ... P22251 32641510
    577768 6x80:G (3.5) BS06 P8E ? GO:0005198 ... P22251 32641510
    577769 6x80:G (3.5) BS07 P8E ? GO:0005198 ... P22251 32641510
    577770 6x80:G (3.5) BS08 P8E ? GO:0005198 ... P22251 32641510
    577771 6x80:G (3.5) BS09 P8E ? GO:0005198 ... P22251 32641510
    577772 6x80:G (3.5) BS10 P8E ? GO:0005198 ... P22251 32641510
    577773 6x80:G (3.5) BS11 P8E ? GO:0005198 ... P22251 32641510
    577774 6x80:G (3.5) BS12 P8E ? GO:0005198 ... P22251 32641510
    577775 6x80:G (3.5) BS13 P8E ? GO:0005198 ... P22251 32641510
    577776 6x80:H (3.5) BS01 P8E ? GO:0005198 ... P22251 32641510
    577777 6x80:H (3.5) BS02 P8E ? GO:0005198 ... P22251 32641510
    577778 6x80:H (3.5) BS03 P8E ? GO:0005198 ... P22251 32641510
    577779 6x80:H (3.5) BS04 P8E ? GO:0005198 ... P22251 32641510
    577780 6x80:H (3.5) BS05 P8E ? GO:0005198 ... P22251 32641510
    577781 6x80:H (3.5) BS06 P8E ? GO:0005198 ... P22251 32641510
    577782 6x80:H (3.5) BS07 P8E ? GO:0005198 ... P22251 32641510
    577783 6x80:H (3.5) BS08 P8E ? GO:0005198 ... P22251 32641510
    577784 6x80:H (3.5) BS09 P8E ? GO:0005198 ... P22251 32641510
    577785 6x80:H (3.5) BS10 P8E ? GO:0005198 ... P22251 32641510
    577786 6x80:H (3.5) BS11 P8E ? GO:0005198 ... P22251 32641510
    577787 6x80:I (3.5) BS01 P8E ? GO:0005198 ... P22251 32641510
    577788 6x80:I (3.5) BS02 P8E ? GO:0005198 ... P22251 32641510
    577789 6x80:I (3.5) BS03 P8E ? GO:0005198 ... P22251 32641510
    577790 6x80:I (3.5) BS04 P8E ? GO:0005198 ... P22251 32641510
    577791 6x80:I (3.5) BS05 P8E ? GO:0005198 ... P22251 32641510
    577792 6x80:I (3.5) BS06 P8E ? GO:0005198 ... P22251 32641510
    577793 6x80:I (3.5) BS07 P8E ? GO:0005198 ... P22251 32641510
    577794 6x80:I (3.5) BS08 P8E ? GO:0005198 ... P22251 32641510
    577795 6x80:I (3.5) BS09 P8E ? GO:0005198 ... P22251 32641510
    577796 6x80:I (3.5) BS10 P8E ? GO:0005198 ... P22251 32641510
    577797 6x80:I (3.5) BS11 P8E ? GO:0005198 ... P22251 32641510
    577798 6x80:I (3.5) BS12 P8E ? GO:0005198 ... P22251 32641510
    577799 6x80:J (3.5) BS01 P8E ? GO:0005198 ... P22251 32641510
    577800 6x80:J (3.5) BS02 P8E ? GO:0005198 ... P22251 32641510

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).