SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    57601 1veq:B (3.98) BS02 FE 1.16.-.- GO:0008199 ... P0C558 15178251
    57602 1veq:C (3.98) BS01 FE 1.16.-.- GO:0008199 ... P0C558 15178251
    57603 1veq:D (3.98) BS01 FE 1.16.-.- GO:0008199 ... P0C558 15178251
    57604 1veq:D (3.98) BS02 FE 1.16.-.- GO:0008199 ... P0C558 15178251
    57605 1veq:E (3.98) BS01 FE 1.16.-.- GO:0008199 ... P0C558 15178251
    57606 1veq:F (3.98) BS01 FE 1.16.-.- GO:0008199 ... P0C558 15178251
    57607 1veq:G (3.98) BS01 FE 1.16.-.- GO:0008199 ... P0C558 15178251
    57608 1veq:H (3.98) BS01 FE 1.16.-.- GO:0008199 ... P0C558 15178251
    57609 1veq:I (3.98) BS01 FE 1.16.-.- GO:0008199 ... P0C558 15178251
    57610 1veq:J (3.98) BS01 FE 1.16.-.- GO:0008199 ... P0C558 15178251
    57611 1veq:J (3.98) BS02 FE 1.16.-.- GO:0008199 ... P0C558 15178251
    57612 1veq:K (3.98) BS01 FE 1.16.-.- GO:0008199 ... P0C558 15178251
    57613 1veq:L (3.98) BS01 FE 1.16.-.- GO:0008199 ... P0C558 15178251
    57614 1veq:L (3.98) BS02 FE 1.16.-.- GO:0008199 ... P0C558 15178251
    57615 1vev:A (2.51) BS01 ZN 3.5.1.88 GO:0005737 ... Q93LE9 16239225
    57616 1vev:B (2.51) BS01 ZN 3.5.1.88 GO:0005737 ... Q93LE9 16239225
    57617 1vew:A (2.1) BS01 MN 1.15.1.1 GO:0003677 ... P00448 N/A
    57618 1vew:B (2.1) BS01 MN 1.15.1.1 GO:0003677 ... P00448 N/A
    57619 1vew:C (2.1) BS01 MN 1.15.1.1 GO:0003677 ... P00448 N/A
    57620 1vew:D (2.1) BS01 MN 1.15.1.1 GO:0003677 ... P00448 N/A
    57621 1vey:A (3.3) BS01 ZN 3.5.1.88 GO:0005737 ... Q93LE9 16239225
    57622 1vey:B (3.3) BS01 ZN 3.5.1.88 GO:0005737 ... Q93LE9 16239225
    57623 1vez:A (2.3) BS01 ZN 3.5.1.88 GO:0005737 ... Q93LE9 16239225
    57624 1vez:B (2.3) BS01 ZN 3.5.1.88 GO:0005737 ... Q93LE9 16239225
    57625 1vf1:A (1.77) BS01 GSH 2.5.1.18 GO:0004364 ... P26697 N/A
    57626 1vf2:A (2.15) BS01 GTX 2.5.1.18 GO:0004364 ... P26697 N/A
    57627 1vf2:A (2.15) BS02 GTX 2.5.1.18 GO:0004364 ... P26697 N/A
    57628 1vf2:B (2.15) BS01 GTX 2.5.1.18 GO:0004364 ... P26697 N/A
    57629 1vf2:B (2.15) BS02 GTX 2.5.1.18 GO:0004364 ... P26697 N/A
    57630 1vf3:A (2.15) BS01 GDN 2.5.1.18 GO:0004364 ... P26697 N/A
    57631 1vf3:A (2.15) BS02 GDN 2.5.1.18 GO:0004364 ... P26697 N/A
    57632 1vf3:B (2.15) BS01 GDN 2.5.1.18 GO:0004364 ... P26697 N/A
    57633 1vf3:B (2.15) BS02 GDN 2.5.1.18 GO:0004364 ... P26697 N/A
    57634 1vf5:A (3.0) BS01 HEM ? GO:0009055 ... P83791 14526088
    57635 1vf5:A (3.0) BS02 HEM ? GO:0009055 ... P83791 14526088
    57636 1vf5:A (3.0) BS03 HEM ? GO:0009055 ... P83791 14526088
    57637 1vf5:A (3.0) BS04 TDS ? GO:0009055 ... P83791 14526088
    57638 1vf5:A (3.0) BS05 CLA ? GO:0009055 ... P83791 14526088
    57639 1vf5:B (3.0) BS01 peptide ? GO:0008121 ... P83792 14526088
    57640 1vf5:B (3.0) BS02 TDS ? GO:0008121 ... P83792 14526088
    57641 1vf5:B (3.0) BS03 CLA ? GO:0008121 ... P83792 14526088
    57642 1vf5:C (3.0) BS01 peptide ? GO:0005506 ... P83793 14526088
    57643 1vf5:C (3.0) BS02 HEM ? GO:0005506 ... P83793 14526088
    57644 1vf5:D (3.0) BS01 FES 7.1.1.6 GO:0004497 ... P83794 14526088
    57645 1vf5:F (3.0) BS01 peptide ? GO:0009055 ... P83796 14526088
    57646 1vf5:N (3.0) BS01 HEM ? GO:0009055 ... P83791 14526088
    57647 1vf5:N (3.0) BS02 HEM ? GO:0009055 ... P83791 14526088
    57648 1vf5:N (3.0) BS03 HEM ? GO:0009055 ... P83791 14526088
    57649 1vf5:N (3.0) BS04 TDS ? GO:0009055 ... P83791 14526088
    57650 1vf5:O (3.0) BS01 peptide ? GO:0008121 ... P83792 14526088
    57651 1vf5:O (3.0) BS02 HEM ? GO:0008121 ... P83792 14526088
    57652 1vf5:O (3.0) BS03 TDS ? GO:0008121 ... P83792 14526088
    57653 1vf5:O (3.0) BS04 CLA ? GO:0008121 ... P83792 14526088
    57654 1vf5:P (3.0) BS01 peptide ? GO:0005506 ... P83793 14526088
    57655 1vf5:P (3.0) BS02 HEM ? GO:0005506 ... P83793 14526088
    57656 1vf5:Q (3.0) BS01 FES 7.1.1.6 GO:0004497 ... P83794 14526088
    57657 1vf5:S (3.0) BS01 peptide ? GO:0009055 ... P83796 14526088
    57658 1vfc:A (-1.00) BS01 dna ? GO:0000723 ... Q15554 15608118
    57659 1vfc:A (-1.00) BS02 dna ? GO:0000723 ... Q15554 15608118
    57660 1vfd:A (2.5) BS01 FE 3.4.21.- GO:0005576 ... P02788 8931543
    57661 1vfd:A (2.5) BS02 CO3 3.4.21.- GO:0005576 ... P02788 8931543
    57662 1vfe:A (2.3) BS01 FE 3.4.21.- GO:0005576 ... P02788 8931543
    57663 1vfe:A (2.3) BS02 CO3 3.4.21.- GO:0005576 ... P02788 8931543
    57664 1vfg:A (2.8) BS01 rna 2.7.7.- GO:0003723 ... O66728 15295603
    57665 1vfg:A (2.8) BS02 APC 2.7.7.- GO:0003723 ... O66728 15295603
    57666 1vfg:B (2.8) BS01 rna 2.7.7.- GO:0003723 ... O66728 15295603
    57667 1vfg:B (2.8) BS02 APC 2.7.7.- GO:0003723 ... O66728 15295603
    57668 1vfh:A (2.0) BS01 PLP 5.1.1.1 GO:0003824 ... Q65YW7 15302886
    57669 1vfl:A (1.8) BS01 ZN 3.5.4.4 GO:0004000 ... P56658 16060665
    57670 1vfm:A (2.9) BS01 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57671 1vfm:A (2.9) BS02 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57672 1vfm:A (2.9) BS03 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57673 1vfm:A (2.9) BS04 CA 3.2.1.135 GO:0004553 ... Q08751 15138257
    57674 1vfm:B (2.9) BS01 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57675 1vfm:B (2.9) BS02 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57676 1vfm:B (2.9) BS03 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57677 1vfm:B (2.9) BS04 CA 3.2.1.135 GO:0004553 ... Q08751 15138257
    57678 1vfn:A (2.15) BS01 HPA 2.4.2.1 GO:0003824 ... P55859 9020983 MOAD: Ki=2.5uM
    BindingDB: Kd=680nM
    57679 1vfo:A (2.81) BS01 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57680 1vfo:A (2.81) BS02 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57681 1vfo:A (2.81) BS03 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57682 1vfo:A (2.81) BS04 CA 3.2.1.135 GO:0004553 ... Q08751 15138257
    57683 1vfo:B (2.81) BS01 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57684 1vfo:B (2.81) BS02 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57685 1vfo:B (2.81) BS03 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57686 1vfo:B (2.81) BS04 CA 3.2.1.135 GO:0004553 ... Q08751 15138257
    57687 1vfp:A (2.9) BS01 CA 7.2.2.10 GO:0000166 ... P04191 15229613
    57688 1vfp:A (2.9) BS02 CA 7.2.2.10 GO:0000166 ... P04191 15229613
    57689 1vfp:A (2.9) BS03 MG 7.2.2.10 GO:0000166 ... P04191 15229613
    57690 1vfp:A (2.9) BS04 ACP 7.2.2.10 GO:0000166 ... P04191 15229613
    57691 1vfp:B (2.9) BS01 CA 7.2.2.10 GO:0000166 ... P04191 15229613
    57692 1vfp:B (2.9) BS02 CA 7.2.2.10 GO:0000166 ... P04191 15229613
    57693 1vfp:B (2.9) BS03 MG 7.2.2.10 GO:0000166 ... P04191 15229613
    57694 1vfp:B (2.9) BS04 ACP 7.2.2.10 GO:0000166 ... P04191 15229613
    57695 1vfr:A (1.8) BS01 FMN 1.6.99.- GO:0016491 ... P46072 9654450
    57696 1vfr:A (1.8) BS02 FMN 1.6.99.- GO:0016491 ... P46072 9654450
    57697 1vfr:B (1.8) BS01 FMN 1.6.99.- GO:0016491 ... P46072 9654450
    57698 1vfr:B (1.8) BS02 FMN 1.6.99.- GO:0016491 ... P46072 9654450
    57699 1vfs:A (1.9) BS01 DCS 5.1.1.1 GO:0003824 ... Q65YW7 15302886
    57700 1vfs:A (1.9) BS02 DCS 5.1.1.1 GO:0003824 ... Q65YW7 15302886
    57701 1vfs:B (1.9) BS01 DCS 5.1.1.1 GO:0003824 ... Q65YW7 15302886
    57702 1vfs:B (1.9) BS02 DCS 5.1.1.1 GO:0003824 ... Q65YW7 15302886
    57703 1vft:A (2.3) BS01 DCS 5.1.1.1 GO:0003824 ... Q65YW7 15302886
    57704 1vft:A (2.3) BS02 DCS 5.1.1.1 GO:0003824 ... Q65YW7 15302886
    57705 1vft:B (2.3) BS01 DCS 5.1.1.1 GO:0003824 ... Q65YW7 15302886
    57706 1vft:B (2.3) BS02 DCS 5.1.1.1 GO:0003824 ... Q65YW7 15302886
    57707 1vfu:A (3.1) BS01 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57708 1vfu:A (3.1) BS02 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57709 1vfu:A (3.1) BS03 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57710 1vfu:A (3.1) BS04 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57711 1vfu:A (3.1) BS05 CA 3.2.1.135 GO:0004553 ... Q08751 15138257
    57712 1vfu:B (3.1) BS01 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57713 1vfu:B (3.1) BS02 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57714 1vfu:B (3.1) BS03 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57715 1vfu:B (3.1) BS04 GLC 3.2.1.135 GO:0004553 ... Q08751 15138257
    57716 1vfu:B (3.1) BS05 CA 3.2.1.135 GO:0004553 ... Q08751 15138257
    57717 1vfv:A (1.85) BS01 ANP ? GO:0003777 ... P33173 15286375
    57718 1vfw:A (2.3) BS01 ANP ? GO:0003777 ... P33173 15286375
    57719 1vfx:A (2.55) BS01 ADP ? GO:0003777 ... P33173 15286375
    57720 1vfy:A (1.15) BS01 ZN ? GO:0046872 ... P40343 10367894
    57721 1vfy:A (1.15) BS02 ZN ? GO:0046872 ... P40343 10367894
    57722 1vfz:A (2.24) BS01 ADP ? GO:0003777 ... P33173 15286375
    57723 1vg0:A (2.2) BS01 GER ? GO:0005092 ... P37727 15186776 MOAD: Kd=0.8nM
    57724 1vg0:B (2.2) BS01 GDP 3.6.5.2 GO:0000421 ... P09527 15186776
    57725 1vg1:A (1.9) BS01 GDP 3.6.5.2 GO:0003924 ... P09527 15186776
    57726 1vg8:A (1.7) BS01 MG 3.6.5.2 GO:0000421 ... P09527 15186776
    57727 1vg8:A (1.7) BS02 GNP 3.6.5.2 GO:0000421 ... P09527 15186776
    57728 1vg8:B (1.7) BS01 MG 3.6.5.2 GO:0000421 ... P09527 15186776
    57729 1vg8:B (1.7) BS02 GNP 3.6.5.2 GO:0000421 ... P09527 15186776
    57730 1vg8:C (1.7) BS01 MG 3.6.5.2 GO:0000421 ... P09527 15186776
    57731 1vg8:C (1.7) BS02 GNP 3.6.5.2 GO:0000421 ... P09527 15186776
    57732 1vg8:D (1.7) BS01 MG 3.6.5.2 GO:0000421 ... P09527 15186776
    57733 1vg8:D (1.7) BS02 GNP 3.6.5.2 GO:0000421 ... P09527 15186776
    57734 1vg9:B (2.5) BS01 GDP 3.6.5.2 GO:0003924 ... P09527 15186776
    57735 1vg9:D (2.5) BS01 GDP 3.6.5.2 GO:0003924 ... P09527 15186776
    57736 1vg9:F (2.5) BS01 GDP 3.6.5.2 GO:0003924 ... P09527 15186776
    57737 1vg9:H (2.5) BS01 GDP 3.6.5.2 GO:0003924 ... P09527 15186776
    57738 1vgc:B (1.9) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 9425066
    57739 1vgc:C (1.9) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 9425066
    57740 1vgc:C (1.9) BS02 V36 3.4.21.1 GO:0004252 ... P00766 9425066
    57741 1vgi:A (1.9) BS01 HEM 1.14.14.18 GO:0001525 ... P06762 15312758
    57742 1vgk:A (2.06) BS01 peptide ? N/A P01902 N/A
    57743 1vgn:A (2.63) BS01 ZN 3.5.2.6 GO:0008270 ... P52699 15892033
    57744 1vgn:A (2.63) BS02 ZN 3.5.2.6 GO:0008270 ... P52699 15892033
    57745 1vgn:A (2.63) BS03 OPS 3.5.2.6 GO:0008270 ... P52699 15892033
    57746 1vgn:B (2.63) BS01 ZN 3.5.2.6 GO:0008270 ... P52699 15892033
    57747 1vgn:B (2.63) BS02 ZN 3.5.2.6 GO:0008270 ... P52699 15892033
    57748 1vgn:B (2.63) BS03 OPS 3.5.2.6 GO:0008270 ... P52699 15892033
    57749 1vgo:A (2.5) BS01 RET ? GO:0005216 ... P29563 16540121
    57750 1vgo:B (2.5) BS01 RET ? GO:0005216 ... P29563 16540121
    57751 1vgq:A (2.13) BS01 CAO 2.8.3.16 GO:0003824 ... O06644 15213226
    57752 1vgq:B (2.13) BS01 CAO 2.8.3.16 GO:0003824 ... O06644 15213226
    57753 1vgr:A (2.1) BS01 COA 2.8.3.16 GO:0003824 ... O06644 15213226
    57754 1vgr:B (2.1) BS01 COA 2.8.3.16 GO:0003824 ... O06644 15213226
    57755 1vgv:B (2.31) BS01 UD1 5.1.3.14 GO:0000271 ... P27828 16021622
    57756 1vgv:C (2.31) BS01 UD1 5.1.3.14 GO:0000271 ... P27828 16021622
    57757 1vgx:A (1.9) BS01 ZN 4.4.1.21 GO:0005506 ... Q9RRU8 16021622
    57758 1vgx:B (1.9) BS01 ZN 4.4.1.21 GO:0005506 ... Q9RRU8 16021622
    57759 1vh2:A (2.0) BS01 ZN 4.4.1.21 GO:0005506 ... Q9RRU8 16021622
    57760 1vh3:A (2.7) BS01 CMK 2.7.7.38 GO:0005737 ... P44490 16021622
    57761 1vh3:B (2.7) BS01 CMK 2.7.7.38 GO:0005737 ... P44490 16021622
    57762 1vh8:A (2.35) BS01 POP 4.6.1.12 GO:0008685 ... P44815 16021622
    57763 1vh8:B (2.35) BS01 POP 4.6.1.12 GO:0008685 ... P44815 16021622
    57764 1vh8:C (2.35) BS01 POP 4.6.1.12 GO:0008685 ... P44815 16021622
    57765 1vh8:D (2.35) BS01 POP 4.6.1.12 GO:0008685 ... P44815 16021622
    57766 1vh8:E (2.35) BS01 POP 4.6.1.12 GO:0008685 ... P44815 16021622
    57767 1vh8:F (2.35) BS01 POP 4.6.1.12 GO:0008685 ... P44815 16021622
    57768 1vha:A (2.35) BS01 POP 4.6.1.12 GO:0008685 ... P44815 16021622
    57769 1vha:B (2.35) BS01 POP 4.6.1.12 GO:0008685 ... P44815 16021622
    57770 1vha:C (2.35) BS01 POP 4.6.1.12 GO:0008685 ... P44815 16021622
    57771 1vha:D (2.35) BS01 POP 4.6.1.12 GO:0008685 ... P44815 16021622
    57772 1vha:E (2.35) BS01 POP 4.6.1.12 GO:0008685 ... P44815 16021622
    57773 1vha:F (2.35) BS01 POP 4.6.1.12 GO:0008685 ... P44815 16021622
    57774 1vhb:A (1.83) BS01 HEM ? GO:0008941 ... P04252 9115439
    57775 1vhb:B (1.83) BS01 HEM ? GO:0008941 ... P04252 9115439
    57776 1vhd:A (1.6) BS01 ZN 1.1.1.- GO:0004022 ... Q9X022 16021622
    57777 1vhd:A (1.6) BS02 NAP 1.1.1.- GO:0004022 ... Q9X022 16021622
    57778 1vhd:B (1.6) BS01 ZN 1.1.1.- GO:0004022 ... Q9X022 16021622
    57779 1vhd:B (1.6) BS02 NAP 1.1.1.- GO:0004022 ... Q9X022 16021622
    57780 1vhe:A (1.9) BS01 ZN 3.4.11.- GO:0070006 ... P94521 16021622
    57781 1vhh:A (1.7) BS01 ZN 3.1.-.- GO:0007267 ... Q62226 7477329
    57782 1vhl:A (1.65) BS01 ADP 2.7.1.24 GO:0004140 ... P0A6I9 16021622
    57783 1vhn:A (1.59) BS01 FMN 1.3.1.- GO:0002943 ... Q9WXV1 15103641
    57784 1vht:A (1.59) BS01 BA3 2.7.1.24 GO:0004140 ... P0A6I9 16021622
    57785 1vht:B (1.59) BS01 BA3 2.7.1.24 GO:0004140 ... P0A6I9 16021622
    57786 1vht:C (1.59) BS01 BA3 2.7.1.24 GO:0004140 ... P0A6I9 16021622
    57787 1vhw:A (1.54) BS01 ADN 2.4.2.1 GO:0003824 ... Q9KPM0 16021622
    57788 1vhw:A (1.54) BS02 ADN 2.4.2.1 GO:0003824 ... Q9KPM0 16021622
    57789 1vhw:B (1.54) BS01 ADN 2.4.2.1 GO:0003824 ... Q9KPM0 16021622
    57790 1vhw:B (1.54) BS02 ADN 2.4.2.1 GO:0003824 ... Q9KPM0 16021622
    57791 1vhw:C (1.54) BS01 ADN 2.4.2.1 GO:0003824 ... Q9KPM0 16021622
    57792 1vhw:C (1.54) BS02 ADN 2.4.2.1 GO:0003824 ... Q9KPM0 16021622
    57793 1vhw:D (1.54) BS01 ADN 2.4.2.1 GO:0003824 ... Q9KPM0 16021622
    57794 1vhw:D (1.54) BS02 ADN 2.4.2.1 GO:0003824 ... Q9KPM0 16021622
    57795 1vhw:E (1.54) BS01 ADN 2.4.2.1 GO:0003824 ... Q9KPM0 16021622
    57796 1vhw:E (1.54) BS02 ADN 2.4.2.1 GO:0003824 ... Q9KPM0 16021622
    57797 1vhw:F (1.54) BS01 ADN 2.4.2.1 GO:0003824 ... Q9KPM0 16021622
    57798 1vhw:F (1.54) BS02 ADN 2.4.2.1 GO:0003824 ... Q9KPM0 16021622
    57799 1vhz:A (2.32) BS01 APR 3.6.1.- GO:0000287 ... P45799 16021622
    57800 1vhz:B (2.32) BS01 APR 3.6.1.- GO:0000287 ... P45799 16021622

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).