SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    579201 6xhs:B (2.9) BS01 CTP 2.7.7.40 GO:0003824 ... Q2G1C0 33819634
    579202 6xhs:E (2.9) BS01 CTP 2.7.7.40 GO:0003824 ... Q2G1C0 33819634
    579203 6xht:A (1.8) BS01 V2V 2.7.7.40 GO:0003824 ... Q2G1C0 33819634
    579204 6xht:B (1.8) BS01 V2V 2.7.7.40 GO:0003824 ... Q2G1C0 33819634
    579205 6xht:E (1.8) BS01 V2V 2.7.7.40 GO:0003824 ... Q2G1C0 33819634
    579206 6xht:F (1.8) BS01 V2V 2.7.7.40 GO:0003824 ... Q2G1C0 33819634
    579207 6xhv:10 (2.4) BS01 rna ? GO:0003735 ... P60493 33462493
    579208 6xhv:10 (2.4) BS02 rna ? GO:0003735 ... P60493 33462493
    579209 6xhv:10 (2.4) BS03 rna ? GO:0003735 ... P60493 33462493
    579210 6xhv:10 (2.4) BS04 MG ? GO:0003735 ... P60493 33462493
    579211 6xhv:10 (2.4) BS05 MG ? GO:0003735 ... P60493 33462493
    579212 6xhv:10 (2.4) BS06 MG ? GO:0003735 ... P60493 33462493
    579213 6xhv:11 (2.4) BS01 rna ? GO:0003735 ... P60494 33462493
    579214 6xhv:11 (2.4) BS02 rna ? GO:0003735 ... P60494 33462493
    579215 6xhv:11 (2.4) BS03 MG ? GO:0003735 ... P60494 33462493
    579216 6xhv:12 (2.4) BS01 rna ? GO:0003735 ... Q5SHP6 33462493
    579217 6xhv:12 (2.4) BS02 MG ? GO:0003735 ... Q5SHP6 33462493
    579218 6xhv:13 (2.4) BS01 rna ? GO:0003735 ... Q5SHQ6 33462493
    579219 6xhv:13 (2.4) BS02 rna ? GO:0003735 ... Q5SHQ6 33462493
    579220 6xhv:13 (2.4) BS03 MG ? GO:0003735 ... Q5SHQ6 33462493
    579221 6xhv:13 (2.4) BS04 MG ? GO:0003735 ... Q5SHQ6 33462493
    579222 6xhv:14 (2.4) BS01 rna ? GO:0003735 ... Q5SJE1 33462493
    579223 6xhv:14 (2.4) BS02 ZN ? GO:0003735 ... Q5SJE1 33462493
    579224 6xhv:15 (2.4) BS01 rna ? GO:0003735 ... P80339 33462493
    579225 6xhv:15 (2.4) BS02 MG ? GO:0003735 ... P80339 33462493
    579226 6xhv:15 (2.4) BS03 MG ? GO:0003735 ... P80339 33462493
    579227 6xhv:15 (2.4) BS04 ZN ? GO:0003735 ... P80339 33462493
    579228 6xhv:16 (2.4) BS01 rna ? GO:0000049 ... P35871 33462493
    579229 6xhv:16 (2.4) BS02 MG ? GO:0000049 ... P35871 33462493
    579230 6xhv:16 (2.4) BS03 MG ? GO:0000049 ... P35871 33462493
    579231 6xhv:16 (2.4) BS04 ZN ? GO:0000049 ... P35871 33462493
    579232 6xhv:17 (2.4) BS01 rna ? GO:0003735 ... P80340 33462493
    579233 6xhv:17 (2.4) BS02 MG ? GO:0003735 ... P80340 33462493
    579234 6xhv:18 (2.4) BS01 rna ? GO:0003735 ... Q5SKU1 33462493
    579235 6xhv:18 (2.4) BS02 MG ? GO:0003735 ... Q5SKU1 33462493
    579236 6xhv:18 (2.4) BS03 MG ? GO:0003735 ... Q5SKU1 33462493
    579237 6xhv:19 (2.4) BS01 rna ? GO:0003735 ... Q5SHR2 33462493
    579238 6xhv:19 (2.4) BS02 ZN ? GO:0003735 ... Q5SHR2 33462493
    579239 6xhv:1D (2.4) BS01 rna ? GO:0002181 ... P60405 33462493
    579240 6xhv:1D (2.4) BS02 rna ? GO:0002181 ... P60405 33462493
    579241 6xhv:1D (2.4) BS03 MG ? GO:0002181 ... P60405 33462493
    579242 6xhv:1D (2.4) BS04 MG ? GO:0002181 ... P60405 33462493
    579243 6xhv:1D (2.4) BS05 MG ? GO:0002181 ... P60405 33462493
    579244 6xhv:1D (2.4) BS06 MG ? GO:0002181 ... P60405 33462493
    579245 6xhv:1D (2.4) BS07 MG ? GO:0002181 ... P60405 33462493
    579246 6xhv:1D (2.4) BS08 MG ? GO:0002181 ... P60405 33462493
    579247 6xhv:1D (2.4) BS09 MG ? GO:0002181 ... P60405 33462493
    579248 6xhv:1D (2.4) BS10 MG ? GO:0002181 ... P60405 33462493
    579249 6xhv:1D (2.4) BS11 MG ? GO:0002181 ... P60405 33462493
    579250 6xhv:1D (2.4) BS12 MG ? GO:0002181 ... P60405 33462493
    579251 6xhv:1D (2.4) BS13 MG ? GO:0002181 ... P60405 33462493
    579252 6xhv:1E (2.4) BS01 rna ? GO:0003735 ... Q5SHN8 33462493
    579253 6xhv:1E (2.4) BS02 MG ? GO:0003735 ... Q5SHN8 33462493
    579254 6xhv:1E (2.4) BS03 MG ? GO:0003735 ... Q5SHN8 33462493
    579255 6xhv:1E (2.4) BS04 MG ? GO:0003735 ... Q5SHN8 33462493
    579256 6xhv:1E (2.4) BS05 MG ? GO:0003735 ... Q5SHN8 33462493
    579257 6xhv:1E (2.4) BS06 MG ? GO:0003735 ... Q5SHN8 33462493
    579258 6xhv:1E (2.4) BS07 MG ? GO:0003735 ... Q5SHN8 33462493
    579259 6xhv:1F (2.4) BS01 rna ? GO:0003735 ... Q5SHN9 33462493
    579260 6xhv:1F (2.4) BS02 MG ? GO:0003735 ... Q5SHN9 33462493
    579261 6xhv:1F (2.4) BS03 MG ? GO:0003735 ... Q5SHN9 33462493
    579262 6xhv:1F (2.4) BS04 MG ? GO:0003735 ... Q5SHN9 33462493
    579263 6xhv:1F (2.4) BS05 MG ? GO:0003735 ... Q5SHN9 33462493
    579264 6xhv:1F (2.4) BS06 MG ? GO:0003735 ... Q5SHN9 33462493
    579265 6xhv:1F (2.4) BS07 MG ? GO:0003735 ... Q5SHN9 33462493
    579266 6xhv:1F (2.4) BS08 MG ? GO:0003735 ... Q5SHN9 33462493
    579267 6xhv:1F (2.4) BS09 MG ? GO:0003735 ... Q5SHN9 33462493
    579268 6xhv:1F (2.4) BS10 MG ? GO:0003735 ... Q5SHN9 33462493
    579269 6xhv:1F (2.4) BS11 MG ? GO:0003735 ... Q5SHN9 33462493
    579270 6xhv:1F (2.4) BS12 MG ? GO:0003735 ... Q5SHN9 33462493
    579271 6xhv:1G (2.4) BS01 rna ? GO:0000049 ... Q5SHQ0 33462493
    579272 6xhv:1G (2.4) BS02 rna ? GO:0000049 ... Q5SHQ0 33462493
    579273 6xhv:1G (2.4) BS03 rna ? GO:0000049 ... Q5SHQ0 33462493
    579274 6xhv:1G (2.4) BS04 MG ? GO:0000049 ... Q5SHQ0 33462493
    579275 6xhv:1G (2.4) BS05 MG ? GO:0000049 ... Q5SHQ0 33462493
    579276 6xhv:1H (2.4) BS01 rna ? GO:0002181 ... P0DOY8 33462493
    579277 6xhv:1I (2.4) BS01 rna ? GO:0003735 ... Q5SLQ1 33462493
    579278 6xhv:1I (2.4) BS02 MG ? GO:0003735 ... Q5SLQ1 33462493
    579279 6xhv:1N (2.4) BS01 rna ? GO:0003729 ... P60488 33462493
    579280 6xhv:1N (2.4) BS02 MG ? GO:0003729 ... P60488 33462493
    579281 6xhv:1N (2.4) BS03 MG ? GO:0003729 ... P60488 33462493
    579282 6xhv:1N (2.4) BS04 MG ? GO:0003729 ... P60488 33462493
    579283 6xhv:1O (2.4) BS01 rna ? GO:0003735 ... Q5SHP8 33462493
    579284 6xhv:1O (2.4) BS02 rna ? GO:0003735 ... Q5SHP8 33462493
    579285 6xhv:1O (2.4) BS03 MG ? GO:0003735 ... Q5SHP8 33462493
    579286 6xhv:1O (2.4) BS04 MG ? GO:0003735 ... Q5SHP8 33462493
    579287 6xhv:1P (2.4) BS01 rna ? GO:0003735 ... Q5SHQ7 33462493
    579288 6xhv:1P (2.4) BS02 MG ? GO:0003735 ... Q5SHQ7 33462493
    579289 6xhv:1P (2.4) BS03 MG ? GO:0003735 ... Q5SHQ7 33462493
    579290 6xhv:1P (2.4) BS04 MG ? GO:0003735 ... Q5SHQ7 33462493
    579291 6xhv:1P (2.4) BS05 MG ? GO:0003735 ... Q5SHQ7 33462493
    579292 6xhv:1Q (2.4) BS01 rna ? GO:0000049 ... P60489 33462493
    579293 6xhv:1Q (2.4) BS02 rna ? GO:0000049 ... P60489 33462493
    579294 6xhv:1Q (2.4) BS03 rna ? GO:0000049 ... P60489 33462493
    579295 6xhv:1Q (2.4) BS04 MG ? GO:0000049 ... P60489 33462493
    579296 6xhv:1Q (2.4) BS05 MG ? GO:0000049 ... P60489 33462493
    579297 6xhv:1Q (2.4) BS06 MG ? GO:0000049 ... P60489 33462493
    579298 6xhv:1Q (2.4) BS07 MG ? GO:0000049 ... P60489 33462493
    579299 6xhv:1Q (2.4) BS08 MG ? GO:0000049 ... P60489 33462493
    579300 6xhv:1R (2.4) BS01 rna ? GO:0003735 ... Q9Z9H5 33462493
    579301 6xhv:1R (2.4) BS02 MG ? GO:0003735 ... Q9Z9H5 33462493
    579302 6xhv:1R (2.4) BS03 MG ? GO:0003735 ... Q9Z9H5 33462493
    579303 6xhv:1R (2.4) BS04 MG ? GO:0003735 ... Q9Z9H5 33462493
    579304 6xhv:1S (2.4) BS01 rna ? GO:0003735 ... Q5SHQ4 33462493
    579305 6xhv:1S (2.4) BS02 rna ? GO:0003735 ... Q5SHQ4 33462493
    579306 6xhv:1S (2.4) BS03 MG ? GO:0003735 ... Q5SHQ4 33462493
    579307 6xhv:1S (2.4) BS04 MG ? GO:0003735 ... Q5SHQ4 33462493
    579308 6xhv:1T (2.4) BS01 rna ? GO:0003735 ... P60490 33462493
    579309 6xhv:1T (2.4) BS02 rna ? GO:0003735 ... P60490 33462493
    579310 6xhv:1T (2.4) BS03 MG ? GO:0003735 ... P60490 33462493
    579311 6xhv:1U (2.4) BS01 rna ? GO:0000027 ... P60491 33462493
    579312 6xhv:1U (2.4) BS02 MG ? GO:0000027 ... P60491 33462493
    579313 6xhv:1U (2.4) BS03 MG ? GO:0000027 ... P60491 33462493
    579314 6xhv:1U (2.4) BS04 MG ? GO:0000027 ... P60491 33462493
    579315 6xhv:1U (2.4) BS05 MG ? GO:0000027 ... P60491 33462493
    579316 6xhv:1U (2.4) BS06 MG ? GO:0000027 ... P60491 33462493
    579317 6xhv:1U (2.4) BS07 MG ? GO:0000027 ... P60491 33462493
    579318 6xhv:1U (2.4) BS08 MG ? GO:0000027 ... P60491 33462493
    579319 6xhv:1U (2.4) BS09 MG ? GO:0000027 ... P60491 33462493
    579320 6xhv:1U (2.4) BS10 MG ? GO:0000027 ... P60491 33462493
    579321 6xhv:1V (2.4) BS01 rna ? GO:0003723 ... P60492 33462493
    579322 6xhv:1V (2.4) BS02 MG ? GO:0003723 ... P60492 33462493
    579323 6xhv:1V (2.4) BS03 MG ? GO:0003723 ... P60492 33462493
    579324 6xhv:1V (2.4) BS04 MG ? GO:0003723 ... P60492 33462493
    579325 6xhv:1V (2.4) BS05 MG ? GO:0003723 ... P60492 33462493
    579326 6xhv:1V (2.4) BS06 MG ? GO:0003723 ... P60492 33462493
    579327 6xhv:1V (2.4) BS07 MG ? GO:0003723 ... P60492 33462493
    579328 6xhv:1W (2.4) BS01 rna ? GO:0003735 ... Q5SHP3 33462493
    579329 6xhv:1W (2.4) BS02 MG ? GO:0003735 ... Q5SHP3 33462493
    579330 6xhv:1W (2.4) BS03 MG ? GO:0003735 ... Q5SHP3 33462493
    579331 6xhv:1W (2.4) BS04 MG ? GO:0003735 ... Q5SHP3 33462493
    579332 6xhv:1W (2.4) BS05 MG ? GO:0003735 ... Q5SHP3 33462493
    579333 6xhv:1W (2.4) BS06 MG ? GO:0003735 ... Q5SHP3 33462493
    579334 6xhv:1X (2.4) BS01 rna ? GO:0003735 ... Q5SHP0 33462493
    579335 6xhv:1X (2.4) BS02 MG ? GO:0003735 ... Q5SHP0 33462493
    579336 6xhv:1X (2.4) BS03 MG ? GO:0003735 ... Q5SHP0 33462493
    579337 6xhv:1X (2.4) BS04 MG ? GO:0003735 ... Q5SHP0 33462493
    579338 6xhv:1X (2.4) BS05 MG ? GO:0003735 ... Q5SHP0 33462493
    579339 6xhv:1X (2.4) BS06 MG ? GO:0003735 ... Q5SHP0 33462493
    579340 6xhv:1Y (2.4) BS01 rna ? GO:0003723 ... Q5SHP9 33462493
    579341 6xhv:1Y (2.4) BS02 MG ? GO:0003723 ... Q5SHP9 33462493
    579342 6xhv:1Y (2.4) BS03 ZN ? GO:0003723 ... Q5SHP9 33462493
    579343 6xhv:1Z (2.4) BS01 rna ? GO:0003723 ... Q5SHZ1 33462493
    579344 6xhv:1Z (2.4) BS02 rna ? GO:0003723 ... Q5SHZ1 33462493
    579345 6xhv:1Z (2.4) BS03 MG ? GO:0003723 ... Q5SHZ1 33462493
    579346 6xhv:1b (2.4) BS01 rna ? GO:0003735 ... P80371 33462493
    579347 6xhv:1b (2.4) BS02 MG ? GO:0003735 ... P80371 33462493
    579348 6xhv:1c (2.4) BS01 rna ? GO:0003676 ... P80372 33462493
    579349 6xhv:1d (2.4) BS01 rna ? GO:0003723 ... P80373 33462493
    579350 6xhv:1d (2.4) BS02 SF4 ? GO:0003723 ... P80373 33462493
    579351 6xhv:1e (2.4) BS01 rna ? GO:0003723 ... Q5SHQ5 33462493
    579352 6xhv:1e (2.4) BS02 MG ? GO:0003723 ... Q5SHQ5 33462493
    579353 6xhv:1e (2.4) BS03 MG ? GO:0003723 ... Q5SHQ5 33462493
    579354 6xhv:1f (2.4) BS01 rna ? GO:0003735 ... Q5SLP8 33462493
    579355 6xhv:1f (2.4) BS02 MG ? GO:0003735 ... Q5SLP8 33462493
    579356 6xhv:1g (2.4) BS01 rna ? GO:0000049 ... P17291 33462493
    579357 6xhv:1g (2.4) BS02 rna ? GO:0000049 ... P17291 33462493
    579358 6xhv:1h (2.4) BS01 rna ? GO:0003735 ... P0DOY9 33462493
    579359 6xhv:1i (2.4) BS01 rna ? GO:0000049 ... P80374 33462493
    579360 6xhv:1i (2.4) BS02 rna ? GO:0000049 ... P80374 33462493
    579361 6xhv:1j (2.4) BS01 rna ? GO:0000049 ... Q5SHN7 33462493
    579362 6xhv:1k (2.4) BS01 rna ? GO:0003735 ... P80376 33462493
    579363 6xhv:1k (2.4) BS02 MG ? GO:0003735 ... P80376 33462493
    579364 6xhv:1l (2.4) BS01 rna ? GO:0000049 ... Q5SHN3 33462493
    579365 6xhv:1l (2.4) BS02 rna ? GO:0000049 ... Q5SHN3 33462493
    579366 6xhv:1l (2.4) BS03 MG ? GO:0000049 ... Q5SHN3 33462493
    579367 6xhv:1m (2.4) BS01 rna ? GO:0000049 ... P80377 33462493
    579368 6xhv:1m (2.4) BS02 rna ? GO:0000049 ... P80377 33462493
    579369 6xhv:1m (2.4) BS03 rna ? GO:0000049 ... P80377 33462493
    579370 6xhv:1m (2.4) BS04 MG ? GO:0000049 ... P80377 33462493
    579371 6xhv:1n (2.4) BS01 rna ? GO:0003735 ... P0DOY6 33462493
    579372 6xhv:1n (2.4) BS02 ZN ? GO:0003735 ... P0DOY6 33462493
    579373 6xhv:1o (2.4) BS01 rna ? GO:0003735 ... Q5SJ76 33462493
    579374 6xhv:1o (2.4) BS02 rna ? GO:0003735 ... Q5SJ76 33462493
    579375 6xhv:1p (2.4) BS01 rna ? GO:0003735 ... Q5SJH3 33462493
    579376 6xhv:1q (2.4) BS01 rna ? GO:0003735 ... P0DOY7 33462493
    579377 6xhv:1r (2.4) BS01 rna ? GO:0003735 ... Q5SLQ0 33462493
    579378 6xhv:1s (2.4) BS01 rna ? GO:0000028 ... Q5SHP2 33462493
    579379 6xhv:1t (2.4) BS01 rna ? GO:0003723 ... P80380 33462493
    579380 6xhv:1t (2.4) BS02 MG ? GO:0003723 ... P80380 33462493
    579381 6xhv:20 (2.4) BS01 rna ? GO:0003735 ... P60493 33462493
    579382 6xhv:20 (2.4) BS02 rna ? GO:0003735 ... P60493 33462493
    579383 6xhv:20 (2.4) BS03 rna ? GO:0003735 ... P60493 33462493
    579384 6xhv:21 (2.4) BS01 rna ? GO:0003735 ... P60494 33462493
    579385 6xhv:21 (2.4) BS02 rna ? GO:0003735 ... P60494 33462493
    579386 6xhv:21 (2.4) BS03 MG ? GO:0003735 ... P60494 33462493
    579387 6xhv:22 (2.4) BS01 rna ? GO:0003735 ... Q5SHP6 33462493
    579388 6xhv:23 (2.4) BS01 rna ? GO:0003735 ... Q5SHQ6 33462493
    579389 6xhv:23 (2.4) BS02 rna ? GO:0003735 ... Q5SHQ6 33462493
    579390 6xhv:23 (2.4) BS03 MG ? GO:0003735 ... Q5SHQ6 33462493
    579391 6xhv:24 (2.4) BS01 rna ? GO:0003735 ... Q5SJE1 33462493
    579392 6xhv:24 (2.4) BS02 ZN ? GO:0003735 ... Q5SJE1 33462493
    579393 6xhv:25 (2.4) BS01 rna ? GO:0003735 ... P80339 33462493
    579394 6xhv:25 (2.4) BS02 ZN ? GO:0003735 ... P80339 33462493
    579395 6xhv:26 (2.4) BS01 rna ? GO:0000049 ... P35871 33462493
    579396 6xhv:26 (2.4) BS02 ZN ? GO:0000049 ... P35871 33462493
    579397 6xhv:27 (2.4) BS01 rna ? GO:0003735 ... P80340 33462493
    579398 6xhv:27 (2.4) BS02 MG ? GO:0003735 ... P80340 33462493
    579399 6xhv:28 (2.4) BS01 rna ? GO:0003735 ... Q5SKU1 33462493
    579400 6xhv:29 (2.4) BS01 rna ? GO:0003735 ... Q5SHR2 33462493

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).