SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    579401 6xhv:29 (2.4) BS02 ZN ? GO:0003735 ... Q5SHR2 33462493
    579402 6xhv:2D (2.4) BS01 rna ? GO:0002181 ... P60405 33462493
    579403 6xhv:2D (2.4) BS02 rna ? GO:0002181 ... P60405 33462493
    579404 6xhv:2D (2.4) BS03 MG ? GO:0002181 ... P60405 33462493
    579405 6xhv:2D (2.4) BS04 MG ? GO:0002181 ... P60405 33462493
    579406 6xhv:2D (2.4) BS05 MG ? GO:0002181 ... P60405 33462493
    579407 6xhv:2D (2.4) BS06 MG ? GO:0002181 ... P60405 33462493
    579408 6xhv:2D (2.4) BS07 MG ? GO:0002181 ... P60405 33462493
    579409 6xhv:2E (2.4) BS01 rna ? GO:0003735 ... Q5SHN8 33462493
    579410 6xhv:2E (2.4) BS02 MG ? GO:0003735 ... Q5SHN8 33462493
    579411 6xhv:2F (2.4) BS01 rna ? GO:0003735 ... Q5SHN9 33462493
    579412 6xhv:2F (2.4) BS02 MG ? GO:0003735 ... Q5SHN9 33462493
    579413 6xhv:2F (2.4) BS03 MG ? GO:0003735 ... Q5SHN9 33462493
    579414 6xhv:2F (2.4) BS04 MG ? GO:0003735 ... Q5SHN9 33462493
    579415 6xhv:2G (2.4) BS01 rna ? GO:0000049 ... Q5SHQ0 33462493
    579416 6xhv:2G (2.4) BS02 rna ? GO:0000049 ... Q5SHQ0 33462493
    579417 6xhv:2G (2.4) BS03 rna ? GO:0000049 ... Q5SHQ0 33462493
    579418 6xhv:2G (2.4) BS04 MG ? GO:0000049 ... Q5SHQ0 33462493
    579419 6xhv:2H (2.4) BS01 rna ? GO:0002181 ... P0DOY8 33462493
    579420 6xhv:2I (2.4) BS01 rna ? GO:0003735 ... Q5SLQ1 33462493
    579421 6xhv:2N (2.4) BS01 rna ? GO:0003729 ... P60488 33462493
    579422 6xhv:2O (2.4) BS01 rna ? GO:0003735 ... Q5SHP8 33462493
    579423 6xhv:2O (2.4) BS02 rna ? GO:0003735 ... Q5SHP8 33462493
    579424 6xhv:2P (2.4) BS01 rna ? GO:0003735 ... Q5SHQ7 33462493
    579425 6xhv:2Q (2.4) BS01 rna ? GO:0000049 ... P60489 33462493
    579426 6xhv:2Q (2.4) BS02 rna ? GO:0000049 ... P60489 33462493
    579427 6xhv:2Q (2.4) BS03 rna ? GO:0000049 ... P60489 33462493
    579428 6xhv:2Q (2.4) BS04 MG ? GO:0000049 ... P60489 33462493
    579429 6xhv:2Q (2.4) BS05 MG ? GO:0000049 ... P60489 33462493
    579430 6xhv:2Q (2.4) BS06 MG ? GO:0000049 ... P60489 33462493
    579431 6xhv:2R (2.4) BS01 rna ? GO:0003735 ... Q9Z9H5 33462493
    579432 6xhv:2S (2.4) BS01 rna ? GO:0003735 ... Q5SHQ4 33462493
    579433 6xhv:2S (2.4) BS02 rna ? GO:0003735 ... Q5SHQ4 33462493
    579434 6xhv:2T (2.4) BS01 rna ? GO:0003735 ... P60490 33462493
    579435 6xhv:2T (2.4) BS02 rna ? GO:0003735 ... P60490 33462493
    579436 6xhv:2U (2.4) BS01 rna ? GO:0000027 ... P60491 33462493
    579437 6xhv:2U (2.4) BS02 MG ? GO:0000027 ... P60491 33462493
    579438 6xhv:2U (2.4) BS03 MG ? GO:0000027 ... P60491 33462493
    579439 6xhv:2V (2.4) BS01 rna ? GO:0003723 ... P60492 33462493
    579440 6xhv:2V (2.4) BS02 MG ? GO:0003723 ... P60492 33462493
    579441 6xhv:2V (2.4) BS03 MG ? GO:0003723 ... P60492 33462493
    579442 6xhv:2V (2.4) BS04 MG ? GO:0003723 ... P60492 33462493
    579443 6xhv:2W (2.4) BS01 rna ? GO:0003735 ... Q5SHP3 33462493
    579444 6xhv:2W (2.4) BS02 MG ? GO:0003735 ... Q5SHP3 33462493
    579445 6xhv:2W (2.4) BS03 MG ? GO:0003735 ... Q5SHP3 33462493
    579446 6xhv:2X (2.4) BS01 rna ? GO:0003735 ... Q5SHP0 33462493
    579447 6xhv:2X (2.4) BS02 MG ? GO:0003735 ... Q5SHP0 33462493
    579448 6xhv:2Y (2.4) BS01 rna ? GO:0003723 ... Q5SHP9 33462493
    579449 6xhv:2Y (2.4) BS02 ZN ? GO:0003723 ... Q5SHP9 33462493
    579450 6xhv:2Z (2.4) BS01 rna ? GO:0003723 ... Q5SHZ1 33462493
    579451 6xhv:2Z (2.4) BS02 rna ? GO:0003723 ... Q5SHZ1 33462493
    579452 6xhv:2Z (2.4) BS03 MG ? GO:0003723 ... Q5SHZ1 33462493
    579453 6xhv:2b (2.4) BS01 rna ? GO:0003735 ... P80371 33462493
    579454 6xhv:2c (2.4) BS01 rna ? GO:0003676 ... P80372 33462493
    579455 6xhv:2d (2.4) BS01 rna ? GO:0003723 ... P80373 33462493
    579456 6xhv:2d (2.4) BS02 SF4 ? GO:0003723 ... P80373 33462493
    579457 6xhv:2e (2.4) BS01 rna ? GO:0003723 ... Q5SHQ5 33462493
    579458 6xhv:2e (2.4) BS02 MG ? GO:0003723 ... Q5SHQ5 33462493
    579459 6xhv:2f (2.4) BS01 rna ? GO:0003735 ... Q5SLP8 33462493
    579460 6xhv:2f (2.4) BS02 MG ? GO:0003735 ... Q5SLP8 33462493
    579461 6xhv:2g (2.4) BS01 rna ? GO:0000049 ... P17291 33462493
    579462 6xhv:2g (2.4) BS02 rna ? GO:0000049 ... P17291 33462493
    579463 6xhv:2h (2.4) BS01 rna ? GO:0003735 ... P0DOY9 33462493
    579464 6xhv:2i (2.4) BS01 rna ? GO:0000049 ... P80374 33462493
    579465 6xhv:2i (2.4) BS02 rna ? GO:0000049 ... P80374 33462493
    579466 6xhv:2j (2.4) BS01 rna ? GO:0000049 ... Q5SHN7 33462493
    579467 6xhv:2j (2.4) BS02 MG ? GO:0000049 ... Q5SHN7 33462493
    579468 6xhv:2k (2.4) BS01 rna ? GO:0003735 ... P80376 33462493
    579469 6xhv:2k (2.4) BS02 MG ? GO:0003735 ... P80376 33462493
    579470 6xhv:2l (2.4) BS01 rna ? GO:0000049 ... Q5SHN3 33462493
    579471 6xhv:2l (2.4) BS02 rna ? GO:0000049 ... Q5SHN3 33462493
    579472 6xhv:2l (2.4) BS03 MG ? GO:0000049 ... Q5SHN3 33462493
    579473 6xhv:2m (2.4) BS01 rna ? GO:0000049 ... P80377 33462493
    579474 6xhv:2m (2.4) BS02 rna ? GO:0000049 ... P80377 33462493
    579475 6xhv:2m (2.4) BS03 rna ? GO:0000049 ... P80377 33462493
    579476 6xhv:2n (2.4) BS01 rna ? GO:0003735 ... P0DOY6 33462493
    579477 6xhv:2n (2.4) BS02 ZN ? GO:0003735 ... P0DOY6 33462493
    579478 6xhv:2o (2.4) BS01 rna ? GO:0003735 ... Q5SJ76 33462493
    579479 6xhv:2o (2.4) BS02 rna ? GO:0003735 ... Q5SJ76 33462493
    579480 6xhv:2p (2.4) BS01 rna ? GO:0003735 ... Q5SJH3 33462493
    579481 6xhv:2q (2.4) BS01 rna ? GO:0003735 ... P0DOY7 33462493
    579482 6xhv:2q (2.4) BS02 MG ? GO:0003735 ... P0DOY7 33462493
    579483 6xhv:2q (2.4) BS03 MG ? GO:0003735 ... P0DOY7 33462493
    579484 6xhv:2r (2.4) BS01 rna ? GO:0003735 ... Q5SLQ0 33462493
    579485 6xhv:2r (2.4) BS02 MG ? GO:0003735 ... Q5SLQ0 33462493
    579486 6xhv:2s (2.4) BS01 rna ? GO:0000028 ... Q5SHP2 33462493
    579487 6xhv:2t (2.4) BS01 rna ? GO:0003723 ... P80380 33462493
    579488 6xhv:2t (2.4) BS02 MG ? GO:0003723 ... P80380 33462493
    579489 6xhw:10 (2.5) BS01 rna ? GO:0003735 ... P60493 33462493
    579490 6xhw:10 (2.5) BS02 rna ? GO:0003735 ... P60493 33462493
    579491 6xhw:10 (2.5) BS03 rna ? GO:0003735 ... P60493 33462493
    579492 6xhw:10 (2.5) BS04 MG ? GO:0003735 ... P60493 33462493
    579493 6xhw:10 (2.5) BS05 MG ? GO:0003735 ... P60493 33462493
    579494 6xhw:10 (2.5) BS06 MG ? GO:0003735 ... P60493 33462493
    579495 6xhw:11 (2.5) BS01 rna ? GO:0003735 ... P60494 33462493
    579496 6xhw:11 (2.5) BS02 rna ? GO:0003735 ... P60494 33462493
    579497 6xhw:11 (2.5) BS03 MG ? GO:0003735 ... P60494 33462493
    579498 6xhw:11 (2.5) BS04 MG ? GO:0003735 ... P60494 33462493
    579499 6xhw:12 (2.5) BS01 rna ? GO:0003735 ... Q5SHP6 33462493
    579500 6xhw:12 (2.5) BS02 MG ? GO:0003735 ... Q5SHP6 33462493
    579501 6xhw:13 (2.5) BS01 rna ? GO:0003735 ... Q5SHQ6 33462493
    579502 6xhw:13 (2.5) BS02 rna ? GO:0003735 ... Q5SHQ6 33462493
    579503 6xhw:13 (2.5) BS03 MG ? GO:0003735 ... Q5SHQ6 33462493
    579504 6xhw:13 (2.5) BS04 MG ? GO:0003735 ... Q5SHQ6 33462493
    579505 6xhw:14 (2.5) BS01 rna ? GO:0003735 ... Q5SJE1 33462493
    579506 6xhw:14 (2.5) BS02 ZN ? GO:0003735 ... Q5SJE1 33462493
    579507 6xhw:15 (2.5) BS01 rna ? GO:0003735 ... P80339 33462493
    579508 6xhw:15 (2.5) BS02 MG ? GO:0003735 ... P80339 33462493
    579509 6xhw:15 (2.5) BS03 MG ? GO:0003735 ... P80339 33462493
    579510 6xhw:15 (2.5) BS04 ZN ? GO:0003735 ... P80339 33462493
    579511 6xhw:16 (2.5) BS01 rna ? GO:0000049 ... P35871 33462493
    579512 6xhw:16 (2.5) BS02 MG ? GO:0000049 ... P35871 33462493
    579513 6xhw:16 (2.5) BS03 MG ? GO:0000049 ... P35871 33462493
    579514 6xhw:16 (2.5) BS04 ZN ? GO:0000049 ... P35871 33462493
    579515 6xhw:17 (2.5) BS01 rna ? GO:0003735 ... P80340 33462493
    579516 6xhw:17 (2.5) BS02 MG ? GO:0003735 ... P80340 33462493
    579517 6xhw:17 (2.5) BS03 MG ? GO:0003735 ... P80340 33462493
    579518 6xhw:18 (2.5) BS01 rna ? GO:0003735 ... Q5SKU1 33462493
    579519 6xhw:18 (2.5) BS02 MG ? GO:0003735 ... Q5SKU1 33462493
    579520 6xhw:18 (2.5) BS03 MG ? GO:0003735 ... Q5SKU1 33462493
    579521 6xhw:19 (2.5) BS01 rna ? GO:0003735 ... Q5SHR2 33462493
    579522 6xhw:19 (2.5) BS02 ZN ? GO:0003735 ... Q5SHR2 33462493
    579523 6xhw:1D (2.5) BS01 rna ? GO:0002181 ... P60405 33462493
    579524 6xhw:1D (2.5) BS02 MG ? GO:0002181 ... P60405 33462493
    579525 6xhw:1D (2.5) BS03 MG ? GO:0002181 ... P60405 33462493
    579526 6xhw:1D (2.5) BS04 MG ? GO:0002181 ... P60405 33462493
    579527 6xhw:1D (2.5) BS05 MG ? GO:0002181 ... P60405 33462493
    579528 6xhw:1D (2.5) BS06 MG ? GO:0002181 ... P60405 33462493
    579529 6xhw:1D (2.5) BS07 MG ? GO:0002181 ... P60405 33462493
    579530 6xhw:1D (2.5) BS08 MG ? GO:0002181 ... P60405 33462493
    579531 6xhw:1D (2.5) BS09 MG ? GO:0002181 ... P60405 33462493
    579532 6xhw:1D (2.5) BS10 MG ? GO:0002181 ... P60405 33462493
    579533 6xhw:1D (2.5) BS11 MG ? GO:0002181 ... P60405 33462493
    579534 6xhw:1E (2.5) BS01 rna ? GO:0003735 ... Q5SHN8 33462493
    579535 6xhw:1E (2.5) BS02 MG ? GO:0003735 ... Q5SHN8 33462493
    579536 6xhw:1E (2.5) BS03 MG ? GO:0003735 ... Q5SHN8 33462493
    579537 6xhw:1E (2.5) BS04 MG ? GO:0003735 ... Q5SHN8 33462493
    579538 6xhw:1E (2.5) BS05 MG ? GO:0003735 ... Q5SHN8 33462493
    579539 6xhw:1F (2.5) BS01 rna ? GO:0003735 ... Q5SHN9 33462493
    579540 6xhw:1F (2.5) BS02 MG ? GO:0003735 ... Q5SHN9 33462493
    579541 6xhw:1F (2.5) BS03 MG ? GO:0003735 ... Q5SHN9 33462493
    579542 6xhw:1F (2.5) BS04 MG ? GO:0003735 ... Q5SHN9 33462493
    579543 6xhw:1F (2.5) BS05 MG ? GO:0003735 ... Q5SHN9 33462493
    579544 6xhw:1F (2.5) BS06 MG ? GO:0003735 ... Q5SHN9 33462493
    579545 6xhw:1F (2.5) BS07 MG ? GO:0003735 ... Q5SHN9 33462493
    579546 6xhw:1F (2.5) BS08 MG ? GO:0003735 ... Q5SHN9 33462493
    579547 6xhw:1F (2.5) BS09 MG ? GO:0003735 ... Q5SHN9 33462493
    579548 6xhw:1F (2.5) BS10 MG ? GO:0003735 ... Q5SHN9 33462493
    579549 6xhw:1G (2.5) BS01 rna ? GO:0000049 ... Q5SHQ0 33462493
    579550 6xhw:1G (2.5) BS02 rna ? GO:0000049 ... Q5SHQ0 33462493
    579551 6xhw:1G (2.5) BS03 MG ? GO:0000049 ... Q5SHQ0 33462493
    579552 6xhw:1G (2.5) BS04 MG ? GO:0000049 ... Q5SHQ0 33462493
    579553 6xhw:1H (2.5) BS01 rna ? GO:0002181 ... P0DOY8 33462493
    579554 6xhw:1I (2.5) BS01 rna ? GO:0003735 ... Q5SLQ1 33462493
    579555 6xhw:1N (2.5) BS01 rna ? GO:0003729 ... P60488 33462493
    579556 6xhw:1N (2.5) BS02 MG ? GO:0003729 ... P60488 33462493
    579557 6xhw:1N (2.5) BS03 MG ? GO:0003729 ... P60488 33462493
    579558 6xhw:1N (2.5) BS04 MG ? GO:0003729 ... P60488 33462493
    579559 6xhw:1O (2.5) BS01 rna ? GO:0003735 ... Q5SHP8 33462493
    579560 6xhw:1O (2.5) BS02 rna ? GO:0003735 ... Q5SHP8 33462493
    579561 6xhw:1O (2.5) BS03 MG ? GO:0003735 ... Q5SHP8 33462493
    579562 6xhw:1P (2.5) BS01 rna ? GO:0003735 ... Q5SHQ7 33462493
    579563 6xhw:1P (2.5) BS02 MG ? GO:0003735 ... Q5SHQ7 33462493
    579564 6xhw:1P (2.5) BS03 MG ? GO:0003735 ... Q5SHQ7 33462493
    579565 6xhw:1P (2.5) BS04 MG ? GO:0003735 ... Q5SHQ7 33462493
    579566 6xhw:1P (2.5) BS05 MG ? GO:0003735 ... Q5SHQ7 33462493
    579567 6xhw:1P (2.5) BS06 MG ? GO:0003735 ... Q5SHQ7 33462493
    579568 6xhw:1Q (2.5) BS01 rna ? GO:0000049 ... P60489 33462493
    579569 6xhw:1Q (2.5) BS02 rna ? GO:0000049 ... P60489 33462493
    579570 6xhw:1Q (2.5) BS03 rna ? GO:0000049 ... P60489 33462493
    579571 6xhw:1Q (2.5) BS04 MG ? GO:0000049 ... P60489 33462493
    579572 6xhw:1Q (2.5) BS05 MG ? GO:0000049 ... P60489 33462493
    579573 6xhw:1Q (2.5) BS06 MG ? GO:0000049 ... P60489 33462493
    579574 6xhw:1Q (2.5) BS07 MG ? GO:0000049 ... P60489 33462493
    579575 6xhw:1R (2.5) BS01 rna ? GO:0003735 ... Q9Z9H5 33462493
    579576 6xhw:1R (2.5) BS02 MG ? GO:0003735 ... Q9Z9H5 33462493
    579577 6xhw:1R (2.5) BS03 MG ? GO:0003735 ... Q9Z9H5 33462493
    579578 6xhw:1S (2.5) BS01 rna ? GO:0003735 ... Q5SHQ4 33462493
    579579 6xhw:1S (2.5) BS02 rna ? GO:0003735 ... Q5SHQ4 33462493
    579580 6xhw:1S (2.5) BS03 MG ? GO:0003735 ... Q5SHQ4 33462493
    579581 6xhw:1S (2.5) BS04 MG ? GO:0003735 ... Q5SHQ4 33462493
    579582 6xhw:1T (2.5) BS01 rna ? GO:0003735 ... P60490 33462493
    579583 6xhw:1T (2.5) BS02 rna ? GO:0003735 ... P60490 33462493
    579584 6xhw:1T (2.5) BS03 MG ? GO:0003735 ... P60490 33462493
    579585 6xhw:1U (2.5) BS01 rna ? GO:0000027 ... P60491 33462493
    579586 6xhw:1U (2.5) BS02 MG ? GO:0000027 ... P60491 33462493
    579587 6xhw:1U (2.5) BS03 MG ? GO:0000027 ... P60491 33462493
    579588 6xhw:1U (2.5) BS04 MG ? GO:0000027 ... P60491 33462493
    579589 6xhw:1U (2.5) BS05 MG ? GO:0000027 ... P60491 33462493
    579590 6xhw:1U (2.5) BS06 MG ? GO:0000027 ... P60491 33462493
    579591 6xhw:1U (2.5) BS07 MG ? GO:0000027 ... P60491 33462493
    579592 6xhw:1U (2.5) BS08 MG ? GO:0000027 ... P60491 33462493
    579593 6xhw:1V (2.5) BS01 rna ? GO:0003723 ... P60492 33462493
    579594 6xhw:1V (2.5) BS02 MG ? GO:0003723 ... P60492 33462493
    579595 6xhw:1V (2.5) BS03 MG ? GO:0003723 ... P60492 33462493
    579596 6xhw:1V (2.5) BS04 MG ? GO:0003723 ... P60492 33462493
    579597 6xhw:1V (2.5) BS05 MG ? GO:0003723 ... P60492 33462493
    579598 6xhw:1V (2.5) BS06 MG ? GO:0003723 ... P60492 33462493
    579599 6xhw:1V (2.5) BS07 MG ? GO:0003723 ... P60492 33462493
    579600 6xhw:1W (2.5) BS01 rna ? GO:0003735 ... Q5SHP3 33462493

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).