SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    5601 1bvr:F (2.8) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 10336454
    5602 1bvr:F (2.8) BS02 THT 1.3.1.9 GO:0004318 ... P9WGR1 10336454
    5603 1bvt:A (1.85) BS01 ZN 3.5.2.6 GO:0008270 ... P04190 9761898
    5604 1bvt:A (1.85) BS02 BCT 3.5.2.6 GO:0008270 ... P04190 9761898
    5605 1bvt:A (1.85) BS03 ZN 3.5.2.6 GO:0008270 ... P04190 9761898
    5606 1bvv:A (1.8) BS01 DFX 3.2.1.8 GO:0004553 ... P09850 10220321
    5607 1bvv:A (1.8) BS02 XYP 3.2.1.8 GO:0004553 ... P09850 10220321
    5608 1bvw:A (1.92) BS01 MAN 3.2.1.91 GO:0004553 ... Q9C1S9 9882628
    5609 1bvy:A (2.03) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 10051560
    5610 1bvy:B (2.03) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 10051560
    5611 1bvy:F (2.03) BS01 FMN 1.14.14.1
    1.6.2.4
    GO:0010181 ... P14779 10051560
    5612 1bw8:A (2.65) BS01 peptide ? GO:0006886 ... P84092 9812899
    5613 1bw9:A (1.5) BS01 NAD 1.4.1.20 GO:0006520 ... Q59771 10029526
    5614 1bw9:A (1.5) BS02 PPY 1.4.1.20 GO:0006520 ... Q59771 10029526
    5615 1bw9:B (1.5) BS01 NAD 1.4.1.20 GO:0006520 ... Q59771 10029526
    5616 1bw9:B (1.5) BS02 PPY 1.4.1.20 GO:0006520 ... Q59771 10029526
    5617 1bwa:A (1.9) BS01 XV6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P04585 9790666
    5618 1bwa:B (1.9) BS01 XV6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P04585 9790666 MOAD: Ki=2.5nM
    5619 1bwb:A (1.8) BS01 146 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P04585 9790666
    5620 1bwb:B (1.8) BS01 146 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P04585 9790666 MOAD: Ki=3.8nM
    5621 1bwc:A (2.1) BS01 FAD 1.8.1.7 GO:0004362 ... P00390 9986706
    5622 1bwc:A (2.1) BS02 AJ3 1.8.1.7 GO:0004362 ... P00390 9986706
    5623 1bwe:A (-1.00) BS01 SF4 ? GO:0009055 ... Q45560 9874217
    5624 1bwe:A (-1.00) BS02 SF4 ? GO:0009055 ... Q45560 9874217
    5625 1bwf:O (3.0) BS01 ATF 2.7.1.30 GO:0004370 ... P0A6F3 10090737
    5626 1bwf:O (3.0) BS02 GOL 2.7.1.30 GO:0004370 ... P0A6F3 10090737
    5627 1bwf:Y (3.0) BS01 ATF 2.7.1.30 GO:0004370 ... P0A6F3 10090737
    5628 1bwf:Y (3.0) BS02 GOL 2.7.1.30 GO:0004370 ... P0A6F3 10090737
    5629 1bwk:A (2.3) BS01 FMN 1.6.99.1 GO:0003959 ... Q02899 9830019
    5630 1bwl:A (2.7) BS01 FMN 1.6.99.1 GO:0003959 ... Q02899 9830019
    5631 1bwn:A (2.1) BS01 ZN 2.7.10.2 GO:0035556 ... Q06187 10196129
    5632 1bwn:A (2.1) BS02 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=87nM
    5633 1bwn:A (2.1) BS03 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=87nM
    5634 1bwn:B (2.1) BS01 ZN 2.7.10.2 GO:0035556 ... Q06187 10196129
    5635 1bwn:B (2.1) BS02 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=87nM
    5636 1bwn:B (2.1) BS03 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=87nM
    5637 1bwo:A (2.1) BS01 LPC ? GO:0006869 ... P24296 10491104
    5638 1bwo:A (2.1) BS02 LPC ? GO:0006869 ... P24296 10491104
    5639 1bwo:B (2.1) BS01 LPC ? GO:0006869 ... P24296 10491104
    5640 1bwo:B (2.1) BS02 LPC ? GO:0006869 ... P24296 10491104
    5641 1bws:A (2.2) BS01 NDP 1.1.1.271 GO:0005737 ... P32055 9817848
    5642 1bwu:A (2.8) BS01 MAN ? N/A Q38789 9887270
    5643 1bwu:A (2.8) BS02 MAN ? N/A Q38789 9887270
    5644 1bwu:A (2.8) BS03 MAN ? N/A Q38789 9887270
    5645 1bwu:A (2.8) BS04 MAN ? N/A Q38789 9887270
    5646 1bwu:A (2.8) BS05 MAN ? N/A Q38789 9887270
    5647 1bwu:D (2.8) BS01 MAN ? N/A Q38784 9887270
    5648 1bwu:D (2.8) BS02 MAN ? N/A Q38784 9887270
    5649 1bwu:D (2.8) BS03 MAN ? N/A Q38784 9887270
    5650 1bwu:D (2.8) BS04 MAN ? N/A Q38784 9887270
    5651 1bwu:D (2.8) BS05 MAN ? N/A Q38784 9887270
    5652 1bwu:P (2.8) BS01 MAN ? N/A Q38789 9887270
    5653 1bwu:P (2.8) BS02 MAN ? N/A Q38789 9887270
    5654 1bwu:P (2.8) BS03 MAN ? N/A Q38789 9887270
    5655 1bwu:P (2.8) BS04 MAN ? N/A Q38789 9887270
    5656 1bwu:Q (2.8) BS01 MAN ? N/A Q38784 9887270
    5657 1bwu:Q (2.8) BS02 MAN ? N/A Q38784 9887270
    5658 1bwu:Q (2.8) BS03 MAN ? N/A Q38784 9887270
    5659 1bwu:Q (2.8) BS04 MAN ? N/A Q38784 9887270
    5660 1bwv:A (2.4) BS01 MG 4.1.1.39 GO:0000287 ... O98949 10336462
    5661 1bwv:A (2.4) BS02 CAP 4.1.1.39 GO:0000287 ... O98949 10336462
    5662 1bwv:C (2.4) BS01 MG 4.1.1.39 GO:0000287 ... O98949 10336462
    5663 1bwv:C (2.4) BS02 CAP 4.1.1.39 GO:0000287 ... O98949 10336462
    5664 1bwv:E (2.4) BS01 MG 4.1.1.39 GO:0000287 ... O98949 10336462
    5665 1bwv:E (2.4) BS02 CAP 4.1.1.39 GO:0000287 ... O98949 10336462
    5666 1bwv:G (2.4) BS01 MG 4.1.1.39 GO:0000287 ... O98949 10336462
    5667 1bwv:G (2.4) BS02 CAP 4.1.1.39 GO:0000287 ... O98949 10336462
    5668 1bx0:A (1.9) BS01 FAD 1.18.1.2 GO:0016491 ... P00455 9852055
    5669 1bx1:A (1.9) BS01 FAD 1.18.1.2 GO:0016491 ... P00455 9852055
    5670 1bx2:A (2.6) BS01 peptide ? GO:0006955 ... P01903 9782128
    5671 1bx2:B (2.6) BS01 peptide ? GO:0006955 ... P01911 9782128
    5672 1bx2:D (2.6) BS01 peptide ? GO:0006955 ... P01903 9782128
    5673 1bx2:E (2.6) BS01 peptide ? GO:0006955 ... P01911 9782128
    5674 1bx3:A (2.3) BS01 PLP 2.4.1.1 GO:0004645 ... P00489 10211820
    5675 1bx4:A (1.5) BS01 MG 2.7.1.20 GO:0003723 ... P55263 9843365
    5676 1bx4:A (1.5) BS02 ADN 2.7.1.20 GO:0003723 ... P55263 9843365
    5677 1bx4:A (1.5) BS03 ADN 2.7.1.20 GO:0003723 ... P55263 9843365
    5678 1bx6:A (2.1) BS01 BA1 2.7.11.11 GO:0000287 ... P05132 10029530
    5679 1bx9:A (2.6) BS01 peptide 2.5.1.18 GO:0000325 ... P46422 9817846
    5680 1bxa:A (1.3) BS01 CU1 ? GO:0005507 ... P22364 9860825
    5681 1bxd:A (-1.00) BS01 ANP 2.7.13.3 GO:0016310 ... P0AEJ4 9817206
    5682 1bxg:A (2.3) BS01 NAD 1.4.1.20 GO:0006520 ... Q59771 10029526
    5683 1bxg:A (2.3) BS02 HCI 1.4.1.20 GO:0006520 ... Q59771 10029526
    5684 1bxg:B (2.3) BS01 NAD 1.4.1.20 GO:0006520 ... Q59771 10029526
    5685 1bxg:B (2.3) BS02 HCI 1.4.1.20 GO:0006520 ... Q59771 10029526
    5686 1bxh:A (2.75) BS01 MMA ? GO:0030246 ... P02866 10336986
    5687 1bxh:A (2.75) BS02 AMG ? GO:0030246 ... P02866 10336986
    5688 1bxh:A (2.75) BS03 MN ? GO:0030246 ... P02866 10336986
    5689 1bxh:A (2.75) BS04 CA ? GO:0030246 ... P02866 10336986
    5690 1bxh:B (2.75) BS01 MMA ? GO:0030246 ... P02866 10336986
    5691 1bxh:B (2.75) BS02 MN ? GO:0030246 ... P02866 10336986
    5692 1bxh:B (2.75) BS03 CA ? GO:0030246 ... P02866 10336986
    5693 1bxh:C (2.75) BS01 MMA ? GO:0030246 ... P02866 10336986
    5694 1bxh:C (2.75) BS02 MN ? GO:0030246 ... P02866 10336986
    5695 1bxh:C (2.75) BS03 CA ? GO:0030246 ... P02866 10336986
    5696 1bxh:D (2.75) BS01 AMG ? GO:0030246 ... P02866 10336986
    5697 1bxh:D (2.75) BS02 AMG ? GO:0030246 ... P02866 10336986
    5698 1bxh:D (2.75) BS03 MN ? GO:0030246 ... P02866 10336986
    5699 1bxh:D (2.75) BS04 CA ? GO:0030246 ... P02866 10336986
    5700 1bxk:A (1.9) BS01 NAD 4.2.1.46 GO:0000271 ... P27830 N/A
    5701 1bxk:B (1.9) BS01 NAD 4.2.1.46 GO:0000271 ... P27830 N/A
    5702 1bxl:A (-1.00) BS01 peptide ? GO:0001836 ... Q07817 9020082
    5703 1bxm:A (2.15) BS01 ERG ? GO:0001907 ... P15570 10386869
    5704 1bxn:A (2.7) BS01 PO4 4.1.1.39 GO:0000287 ... P0C2C2 10329167
    5705 1bxn:C (2.7) BS01 PO4 4.1.1.39 GO:0000287 ... P0C2C2 10329167
    5706 1bxn:C (2.7) BS02 PO4 4.1.1.39 GO:0000287 ... P0C2C2 10329167
    5707 1bxn:E (2.7) BS01 PO4 4.1.1.39 GO:0000287 ... P0C2C2 10329167
    5708 1bxn:G (2.7) BS01 PO4 4.1.1.39 GO:0000287 ... P0C2C2 10329167
    5709 1bxo:A (0.95) BS01 MAN 3.4.23.20 GO:0004190 ... P00798 9836576
    5710 1bxo:A (0.95) BS02 PP7 3.4.23.20 GO:0004190 ... P00798 9836576 MOAD: Ki=0.1nM
    5711 1bxp:A (-1.00) BS01 peptide ? GO:0005515 ... P60615 9177168
    5712 1bxq:A (1.41) BS01 PP8 3.4.23.20 GO:0004190 ... P00798 9836576 MOAD: Ki=42nM
    5713 1bxr:A (2.1) BS01 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5714 1bxr:A (2.1) BS02 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5715 1bxr:A (2.1) BS03 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5716 1bxr:A (2.1) BS04 ANP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5717 1bxr:A (2.1) BS05 ANP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5718 1bxr:A (2.1) BS06 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5719 1bxr:C (2.1) BS01 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5720 1bxr:C (2.1) BS02 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5721 1bxr:C (2.1) BS03 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5722 1bxr:C (2.1) BS04 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5723 1bxr:C (2.1) BS05 ANP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5724 1bxr:C (2.1) BS06 ANP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5725 1bxr:C (2.1) BS07 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5726 1bxr:E (2.1) BS01 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5727 1bxr:E (2.1) BS02 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5728 1bxr:E (2.1) BS03 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5729 1bxr:E (2.1) BS04 ANP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5730 1bxr:E (2.1) BS05 ANP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5731 1bxr:E (2.1) BS06 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5732 1bxr:G (2.1) BS01 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5733 1bxr:G (2.1) BS02 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5734 1bxr:G (2.1) BS03 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5735 1bxr:G (2.1) BS04 ANP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5736 1bxr:G (2.1) BS05 ANP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5737 1bxr:G (2.1) BS06 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10029528
    5738 1bxs:A (2.35) BS01 NAD 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36
    GO:0001523 ... P51977 9862807
    5739 1bxs:B (2.35) BS01 NAD 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36
    GO:0001523 ... P51977 9862807
    5740 1bxs:C (2.35) BS01 NAD 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36
    GO:0001523 ... P51977 9862807
    5741 1bxs:D (2.35) BS01 NAD 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36
    GO:0001523 ... P51977 9862807
    5742 1bxu:A (1.9) BS01 CU ? GO:0005507 ... P55020 10320332
    5743 1bxv:A (1.8) BS01 CU ? GO:0005507 ... P55020 10320332
    5744 1bxw:A (2.5) BS01 C8E ? GO:0009279 ... P0A910 9808047
    5745 1bxx:A (2.7) BS01 peptide ? GO:0006886 ... P84092 9812899
    5746 1bxz:B (2.99) BS01 SBT 1.1.1.80 GO:0008270 ... P14941 10651277
    5747 1bxz:C (2.99) BS01 ZN 1.1.1.80 GO:0008270 ... P14941 10651277
    5748 1by4:A (2.1) BS01 dna ? GO:0003700 ... P19793 10669605
    5749 1by4:A (2.1) BS02 dna ? GO:0003700 ... P19793 10669605
    5750 1by4:A (2.1) BS03 ZN ? GO:0003700 ... P19793 10669605
    5751 1by4:A (2.1) BS04 ZN ? GO:0003700 ... P19793 10669605
    5752 1by4:B (2.1) BS01 dna ? GO:0003700 ... P19793 10669605
    5753 1by4:B (2.1) BS02 dna ? GO:0003700 ... P19793 10669605
    5754 1by4:B (2.1) BS03 dna ? GO:0003700 ... P19793 10669605
    5755 1by4:B (2.1) BS04 ZN ? GO:0003700 ... P19793 10669605
    5756 1by4:B (2.1) BS05 ZN ? GO:0003700 ... P19793 10669605
    5757 1by4:C (2.1) BS01 dna ? GO:0003700 ... P19793 10669605
    5758 1by4:C (2.1) BS02 dna ? GO:0003700 ... P19793 10669605
    5759 1by4:C (2.1) BS03 ZN ? GO:0003700 ... P19793 10669605
    5760 1by4:C (2.1) BS04 ZN ? GO:0003700 ... P19793 10669605
    5761 1by4:D (2.1) BS01 dna ? GO:0003700 ... P19793 10669605
    5762 1by4:D (2.1) BS02 dna ? GO:0003700 ... P19793 10669605
    5763 1by4:D (2.1) BS03 ZN ? GO:0003700 ... P19793 10669605
    5764 1by4:D (2.1) BS04 ZN ? GO:0003700 ... P19793 10669605
    5765 1by5:A (2.6) BS01 peptide ? GO:0005506 ... P06971 9865695
    5766 1byb:A (1.9) BS01 GLC 3.2.1.2 GO:0000272 ... P10538 8011643
    5767 1byb:A (1.9) BS02 GLC 3.2.1.2 GO:0000272 ... P10538 8011643
    5768 1byb:A (1.9) BS03 GLC 3.2.1.2 GO:0000272 ... P10538 8011643
    5769 1byb:A (1.9) BS04 GLC 3.2.1.2 GO:0000272 ... P10538 8011643
    5770 1byc:A (2.2) BS01 BGC 3.2.1.2 GO:0000272 ... P10538 8011643
    5771 1byc:A (2.2) BS02 GLC 3.2.1.2 GO:0000272 ... P10538 8011643
    5772 1byc:A (2.2) BS03 GLC 3.2.1.2 GO:0000272 ... P10538 8011643
    5773 1byc:A (2.2) BS04 GLC 3.2.1.2 GO:0000272 ... P10538 8011643
    5774 1byd:A (2.2) BS01 RR7 3.2.1.2 GO:0000272 ... P10538 8011643
    5775 1byd:A (2.2) BS02 GLC 3.2.1.2 GO:0000272 ... P10538 8011643
    5776 1byd:A (2.2) BS03 RR7 3.2.1.2 GO:0000272 ... P10538 8011643
    5777 1byd:A (2.2) BS04 GLC 3.2.1.2 GO:0000272 ... P10538 8011643
    5778 1bye:A (2.8) BS01 ATA 2.5.1.18 GO:0000302 ... P12653 9817846
    5779 1bye:B (2.8) BS01 ATA 2.5.1.18 GO:0000302 ... P12653 9817846
    5780 1bye:C (2.8) BS01 ATA 2.5.1.18 GO:0000302 ... P12653 9817846
    5781 1bye:D (2.8) BS01 ATA 2.5.1.18 GO:0000302 ... P12653 9817846
    5782 1byf:A (2.0) BS01 CA ? N/A P16108 10398588
    5783 1byf:B (2.0) BS01 CA ? N/A P16108 10398588
    5784 1byg:A (2.4) BS01 STU 2.7.10.2 GO:0004672 ... P41240 9878439
    5785 1byh:A (2.8) BS01 BGC 3.2.1.73 GO:0004553 ... P23904 8099449
    5786 1byh:A (2.8) BS02 BGC 3.2.1.73 GO:0004553 ... P23904 8099449
    5787 1byh:A (2.8) BS03 CA 3.2.1.73 GO:0004553 ... P23904 8099449
    5788 1byn:A (-1.00) BS01 CA ? GO:0016020 ... P21707 9819203
    5789 1byn:A (-1.00) BS02 CA ? GO:0016020 ... P21707 9819203
    5790 1byn:A (-1.00) BS03 CA ? GO:0016020 ... P21707 9819203
    5791 1byo:A (2.0) BS01 CU ? GO:0005507 ... P07030 10220581
    5792 1byo:B (2.0) BS01 CU ? GO:0005507 ... P07030 10220581
    5793 1byp:A (1.75) BS01 CU ? GO:0005507 ... P07030 10220581
    5794 1byq:A (1.5) BS01 ADP 3.6.4.10 GO:0005524 ... P07900 9817749
    5795 1bys:A (2.0) BS01 WO4 3.1.4.4 GO:0003824 ... Q79SE0 10074947
    5796 1byu:A (2.15) BS01 GDP 3.6.5.- GO:0000054 ... P62825 9878368
    5797 1byu:B (2.15) BS01 GDP 3.6.5.- GO:0000054 ... P62825 9878368
    5798 1bz0:A (1.5) BS01 HEM ? GO:0004601 ... P69905 8448109
    5799 1bz0:B (1.5) BS01 HEM ? GO:0004601 ... P68871 8448109
    5800 1bz0:C (1.5) BS01 HEM ? GO:0004601 ... P69905 8448109

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).