SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    579801 6xhx:1E (2.55) BS04 MG ? GO:0003735 ... Q5SHN8 33462493
    579802 6xhx:1E (2.55) BS05 MG ? GO:0003735 ... Q5SHN8 33462493
    579803 6xhx:1F (2.55) BS01 rna ? GO:0003735 ... Q5SHN9 33462493
    579804 6xhx:1F (2.55) BS02 MG ? GO:0003735 ... Q5SHN9 33462493
    579805 6xhx:1F (2.55) BS03 MG ? GO:0003735 ... Q5SHN9 33462493
    579806 6xhx:1F (2.55) BS04 MG ? GO:0003735 ... Q5SHN9 33462493
    579807 6xhx:1F (2.55) BS05 MG ? GO:0003735 ... Q5SHN9 33462493
    579808 6xhx:1F (2.55) BS06 MG ? GO:0003735 ... Q5SHN9 33462493
    579809 6xhx:1F (2.55) BS07 MG ? GO:0003735 ... Q5SHN9 33462493
    579810 6xhx:1F (2.55) BS08 MG ? GO:0003735 ... Q5SHN9 33462493
    579811 6xhx:1F (2.55) BS09 MG ? GO:0003735 ... Q5SHN9 33462493
    579812 6xhx:1F (2.55) BS10 MG ? GO:0003735 ... Q5SHN9 33462493
    579813 6xhx:1F (2.55) BS11 MG ? GO:0003735 ... Q5SHN9 33462493
    579814 6xhx:1F (2.55) BS12 MG ? GO:0003735 ... Q5SHN9 33462493
    579815 6xhx:1F (2.55) BS13 ARG ? GO:0003735 ... Q5SHN9 33462493
    579816 6xhx:1G (2.55) BS01 rna ? GO:0000049 ... Q5SHQ0 33462493
    579817 6xhx:1G (2.55) BS02 rna ? GO:0000049 ... Q5SHQ0 33462493
    579818 6xhx:1G (2.55) BS03 MG ? GO:0000049 ... Q5SHQ0 33462493
    579819 6xhx:1G (2.55) BS04 MG ? GO:0000049 ... Q5SHQ0 33462493
    579820 6xhx:1H (2.55) BS01 rna ? GO:0002181 ... P0DOY8 33462493
    579821 6xhx:1I (2.55) BS01 rna ? GO:0003735 ... Q5SLQ1 33462493
    579822 6xhx:1N (2.55) BS01 rna ? GO:0003729 ... P60488 33462493
    579823 6xhx:1N (2.55) BS02 MG ? GO:0003729 ... P60488 33462493
    579824 6xhx:1N (2.55) BS03 MG ? GO:0003729 ... P60488 33462493
    579825 6xhx:1O (2.55) BS01 rna ? GO:0003735 ... Q5SHP8 33462493
    579826 6xhx:1O (2.55) BS02 rna ? GO:0003735 ... Q5SHP8 33462493
    579827 6xhx:1O (2.55) BS03 MG ? GO:0003735 ... Q5SHP8 33462493
    579828 6xhx:1P (2.55) BS01 rna ? GO:0003735 ... Q5SHQ7 33462493
    579829 6xhx:1P (2.55) BS02 MG ? GO:0003735 ... Q5SHQ7 33462493
    579830 6xhx:1P (2.55) BS03 MG ? GO:0003735 ... Q5SHQ7 33462493
    579831 6xhx:1P (2.55) BS04 MG ? GO:0003735 ... Q5SHQ7 33462493
    579832 6xhx:1Q (2.55) BS01 rna ? GO:0000049 ... P60489 33462493
    579833 6xhx:1Q (2.55) BS02 rna ? GO:0000049 ... P60489 33462493
    579834 6xhx:1Q (2.55) BS03 MG ? GO:0000049 ... P60489 33462493
    579835 6xhx:1Q (2.55) BS04 MG ? GO:0000049 ... P60489 33462493
    579836 6xhx:1Q (2.55) BS05 MG ? GO:0000049 ... P60489 33462493
    579837 6xhx:1R (2.55) BS01 rna ? GO:0003735 ... Q9Z9H5 33462493
    579838 6xhx:1R (2.55) BS02 MG ? GO:0003735 ... Q9Z9H5 33462493
    579839 6xhx:1R (2.55) BS03 MG ? GO:0003735 ... Q9Z9H5 33462493
    579840 6xhx:1R (2.55) BS04 MG ? GO:0003735 ... Q9Z9H5 33462493
    579841 6xhx:1R (2.55) BS05 MG ? GO:0003735 ... Q9Z9H5 33462493
    579842 6xhx:1R (2.55) BS06 MG ? GO:0003735 ... Q9Z9H5 33462493
    579843 6xhx:1S (2.55) BS01 rna ? GO:0003735 ... Q5SHQ4 33462493
    579844 6xhx:1S (2.55) BS02 rna ? GO:0003735 ... Q5SHQ4 33462493
    579845 6xhx:1T (2.55) BS01 rna ? GO:0003735 ... P60490 33462493
    579846 6xhx:1T (2.55) BS02 rna ? GO:0003735 ... P60490 33462493
    579847 6xhx:1U (2.55) BS01 rna ? GO:0000027 ... P60491 33462493
    579848 6xhx:1U (2.55) BS02 MG ? GO:0000027 ... P60491 33462493
    579849 6xhx:1U (2.55) BS03 MG ? GO:0000027 ... P60491 33462493
    579850 6xhx:1U (2.55) BS04 MG ? GO:0000027 ... P60491 33462493
    579851 6xhx:1U (2.55) BS05 MG ? GO:0000027 ... P60491 33462493
    579852 6xhx:1U (2.55) BS06 MG ? GO:0000027 ... P60491 33462493
    579853 6xhx:1U (2.55) BS07 MG ? GO:0000027 ... P60491 33462493
    579854 6xhx:1V (2.55) BS01 rna ? GO:0003723 ... P60492 33462493
    579855 6xhx:1V (2.55) BS02 MG ? GO:0003723 ... P60492 33462493
    579856 6xhx:1V (2.55) BS03 MG ? GO:0003723 ... P60492 33462493
    579857 6xhx:1V (2.55) BS04 MG ? GO:0003723 ... P60492 33462493
    579858 6xhx:1W (2.55) BS01 rna ? GO:0003735 ... Q5SHP3 33462493
    579859 6xhx:1W (2.55) BS02 MG ? GO:0003735 ... Q5SHP3 33462493
    579860 6xhx:1X (2.55) BS01 rna ? GO:0003735 ... Q5SHP0 33462493
    579861 6xhx:1Y (2.55) BS01 rna ? GO:0003723 ... Q5SHP9 33462493
    579862 6xhx:1Y (2.55) BS02 ZN ? GO:0003723 ... Q5SHP9 33462493
    579863 6xhx:1Z (2.55) BS01 rna ? GO:0003723 ... Q5SHZ1 33462493
    579864 6xhx:1Z (2.55) BS02 rna ? GO:0003723 ... Q5SHZ1 33462493
    579865 6xhx:1b (2.55) BS01 rna ? GO:0003735 ... P80371 33462493
    579866 6xhx:1b (2.55) BS02 MG ? GO:0003735 ... P80371 33462493
    579867 6xhx:1c (2.55) BS01 rna ? GO:0003676 ... P80372 33462493
    579868 6xhx:1d (2.55) BS01 rna ? GO:0003723 ... P80373 33462493
    579869 6xhx:1d (2.55) BS02 SF4 ? GO:0003723 ... P80373 33462493
    579870 6xhx:1e (2.55) BS01 rna ? GO:0003723 ... Q5SHQ5 33462493
    579871 6xhx:1e (2.55) BS02 MG ? GO:0003723 ... Q5SHQ5 33462493
    579872 6xhx:1f (2.55) BS01 rna ? GO:0003735 ... Q5SLP8 33462493
    579873 6xhx:1g (2.55) BS01 rna ? GO:0000049 ... P17291 33462493
    579874 6xhx:1h (2.55) BS01 rna ? GO:0003735 ... P0DOY9 33462493
    579875 6xhx:1i (2.55) BS01 rna ? GO:0000049 ... P80374 33462493
    579876 6xhx:1j (2.55) BS01 rna ? GO:0000049 ... Q5SHN7 33462493
    579877 6xhx:1k (2.55) BS01 rna ? GO:0003735 ... P80376 33462493
    579878 6xhx:1l (2.55) BS01 rna ? GO:0000049 ... Q5SHN3 33462493
    579879 6xhx:1l (2.55) BS02 MG ? GO:0000049 ... Q5SHN3 33462493
    579880 6xhx:1m (2.55) BS01 rna ? GO:0000049 ... P80377 33462493
    579881 6xhx:1m (2.55) BS02 MG ? GO:0000049 ... P80377 33462493
    579882 6xhx:1n (2.55) BS01 rna ? GO:0003735 ... P0DOY6 33462493
    579883 6xhx:1n (2.55) BS02 MG ? GO:0003735 ... P0DOY6 33462493
    579884 6xhx:1n (2.55) BS03 ZN ? GO:0003735 ... P0DOY6 33462493
    579885 6xhx:1o (2.55) BS01 rna ? GO:0003735 ... Q5SJ76 33462493
    579886 6xhx:1o (2.55) BS02 rna ? GO:0003735 ... Q5SJ76 33462493
    579887 6xhx:1p (2.55) BS01 rna ? GO:0003735 ... Q5SJH3 33462493
    579888 6xhx:1q (2.55) BS01 rna ? GO:0003735 ... P0DOY7 33462493
    579889 6xhx:1r (2.55) BS01 rna ? GO:0003735 ... Q5SLQ0 33462493
    579890 6xhx:1s (2.55) BS01 rna ? GO:0000028 ... Q5SHP2 33462493
    579891 6xhx:1t (2.55) BS01 rna ? GO:0003723 ... P80380 33462493
    579892 6xhx:1t (2.55) BS02 MG ? GO:0003723 ... P80380 33462493
    579893 6xhx:1y (2.55) BS01 rna ? GO:0005515 ... P0AD49 33462493
    579894 6xhx:1y (2.55) BS02 MG ? GO:0005515 ... P0AD49 33462493
    579895 6xhx:1y (2.55) BS03 MG ? GO:0005515 ... P0AD49 33462493
    579896 6xhx:20 (2.55) BS01 rna ? GO:0003735 ... P60493 33462493
    579897 6xhx:20 (2.55) BS02 rna ? GO:0003735 ... P60493 33462493
    579898 6xhx:20 (2.55) BS03 MG ? GO:0003735 ... P60493 33462493
    579899 6xhx:21 (2.55) BS01 rna ? GO:0003735 ... P60494 33462493
    579900 6xhx:22 (2.55) BS01 rna ? GO:0003735 ... Q5SHP6 33462493
    579901 6xhx:23 (2.55) BS01 rna ? GO:0003735 ... Q5SHQ6 33462493
    579902 6xhx:23 (2.55) BS02 rna ? GO:0003735 ... Q5SHQ6 33462493
    579903 6xhx:23 (2.55) BS03 MG ? GO:0003735 ... Q5SHQ6 33462493
    579904 6xhx:24 (2.55) BS01 rna ? GO:0003735 ... Q5SJE1 33462493
    579905 6xhx:24 (2.55) BS02 ZN ? GO:0003735 ... Q5SJE1 33462493
    579906 6xhx:25 (2.55) BS01 rna ? GO:0003735 ... P80339 33462493
    579907 6xhx:25 (2.55) BS02 MG ? GO:0003735 ... P80339 33462493
    579908 6xhx:25 (2.55) BS03 MG ? GO:0003735 ... P80339 33462493
    579909 6xhx:25 (2.55) BS04 ZN ? GO:0003735 ... P80339 33462493
    579910 6xhx:26 (2.55) BS01 rna ? GO:0000049 ... P35871 33462493
    579911 6xhx:26 (2.55) BS02 ZN ? GO:0000049 ... P35871 33462493
    579912 6xhx:27 (2.55) BS01 rna ? GO:0003735 ... P80340 33462493
    579913 6xhx:27 (2.55) BS02 MG ? GO:0003735 ... P80340 33462493
    579914 6xhx:28 (2.55) BS01 rna ? GO:0003735 ... Q5SKU1 33462493
    579915 6xhx:29 (2.55) BS01 rna ? GO:0003735 ... Q5SHR2 33462493
    579916 6xhx:29 (2.55) BS02 ZN ? GO:0003735 ... Q5SHR2 33462493
    579917 6xhx:2D (2.55) BS01 rna ? GO:0002181 ... P60405 33462493
    579918 6xhx:2D (2.55) BS02 rna ? GO:0002181 ... P60405 33462493
    579919 6xhx:2D (2.55) BS03 MG ? GO:0002181 ... P60405 33462493
    579920 6xhx:2D (2.55) BS04 MG ? GO:0002181 ... P60405 33462493
    579921 6xhx:2D (2.55) BS05 MG ? GO:0002181 ... P60405 33462493
    579922 6xhx:2D (2.55) BS06 MG ? GO:0002181 ... P60405 33462493
    579923 6xhx:2D (2.55) BS07 MG ? GO:0002181 ... P60405 33462493
    579924 6xhx:2D (2.55) BS08 MG ? GO:0002181 ... P60405 33462493
    579925 6xhx:2E (2.55) BS01 rna ? GO:0003735 ... Q5SHN8 33462493
    579926 6xhx:2E (2.55) BS02 MG ? GO:0003735 ... Q5SHN8 33462493
    579927 6xhx:2E (2.55) BS03 MG ? GO:0003735 ... Q5SHN8 33462493
    579928 6xhx:2F (2.55) BS01 rna ? GO:0003735 ... Q5SHN9 33462493
    579929 6xhx:2F (2.55) BS02 MG ? GO:0003735 ... Q5SHN9 33462493
    579930 6xhx:2F (2.55) BS03 MG ? GO:0003735 ... Q5SHN9 33462493
    579931 6xhx:2F (2.55) BS04 MG ? GO:0003735 ... Q5SHN9 33462493
    579932 6xhx:2F (2.55) BS05 MG ? GO:0003735 ... Q5SHN9 33462493
    579933 6xhx:2G (2.55) BS01 rna ? GO:0000049 ... Q5SHQ0 33462493
    579934 6xhx:2G (2.55) BS02 rna ? GO:0000049 ... Q5SHQ0 33462493
    579935 6xhx:2G (2.55) BS03 MG ? GO:0000049 ... Q5SHQ0 33462493
    579936 6xhx:2H (2.55) BS01 rna ? GO:0002181 ... P0DOY8 33462493
    579937 6xhx:2I (2.55) BS01 rna ? GO:0003735 ... Q5SLQ1 33462493
    579938 6xhx:2I (2.55) BS02 MG ? GO:0003735 ... Q5SLQ1 33462493
    579939 6xhx:2N (2.55) BS01 rna ? GO:0003729 ... P60488 33462493
    579940 6xhx:2O (2.55) BS01 rna ? GO:0003735 ... Q5SHP8 33462493
    579941 6xhx:2O (2.55) BS02 rna ? GO:0003735 ... Q5SHP8 33462493
    579942 6xhx:2P (2.55) BS01 rna ? GO:0003735 ... Q5SHQ7 33462493
    579943 6xhx:2Q (2.55) BS01 rna ? GO:0000049 ... P60489 33462493
    579944 6xhx:2Q (2.55) BS02 rna ? GO:0000049 ... P60489 33462493
    579945 6xhx:2Q (2.55) BS03 MG ? GO:0000049 ... P60489 33462493
    579946 6xhx:2R (2.55) BS01 rna ? GO:0003735 ... Q9Z9H5 33462493
    579947 6xhx:2R (2.55) BS02 MG ? GO:0003735 ... Q9Z9H5 33462493
    579948 6xhx:2S (2.55) BS01 rna ? GO:0003735 ... Q5SHQ4 33462493
    579949 6xhx:2S (2.55) BS02 rna ? GO:0003735 ... Q5SHQ4 33462493
    579950 6xhx:2T (2.55) BS01 rna ? GO:0003735 ... P60490 33462493
    579951 6xhx:2T (2.55) BS02 rna ? GO:0003735 ... P60490 33462493
    579952 6xhx:2U (2.55) BS01 rna ? GO:0000027 ... P60491 33462493
    579953 6xhx:2U (2.55) BS02 MG ? GO:0000027 ... P60491 33462493
    579954 6xhx:2V (2.55) BS01 rna ? GO:0003723 ... P60492 33462493
    579955 6xhx:2V (2.55) BS02 MG ? GO:0003723 ... P60492 33462493
    579956 6xhx:2V (2.55) BS03 MG ? GO:0003723 ... P60492 33462493
    579957 6xhx:2W (2.55) BS01 rna ? GO:0003735 ... Q5SHP3 33462493
    579958 6xhx:2W (2.55) BS02 MG ? GO:0003735 ... Q5SHP3 33462493
    579959 6xhx:2W (2.55) BS03 MG ? GO:0003735 ... Q5SHP3 33462493
    579960 6xhx:2X (2.55) BS01 rna ? GO:0003735 ... Q5SHP0 33462493
    579961 6xhx:2Y (2.55) BS01 rna ? GO:0003723 ... Q5SHP9 33462493
    579962 6xhx:2Y (2.55) BS02 ZN ? GO:0003723 ... Q5SHP9 33462493
    579963 6xhx:2Z (2.55) BS01 rna ? GO:0003723 ... Q5SHZ1 33462493
    579964 6xhx:2Z (2.55) BS02 rna ? GO:0003723 ... Q5SHZ1 33462493
    579965 6xhx:2b (2.55) BS01 rna ? GO:0003735 ... P80371 33462493
    579966 6xhx:2c (2.55) BS01 rna ? GO:0003676 ... P80372 33462493
    579967 6xhx:2d (2.55) BS01 rna ? GO:0003723 ... P80373 33462493
    579968 6xhx:2d (2.55) BS02 SF4 ? GO:0003723 ... P80373 33462493
    579969 6xhx:2e (2.55) BS01 rna ? GO:0003723 ... Q5SHQ5 33462493
    579970 6xhx:2f (2.55) BS01 rna ? GO:0003735 ... Q5SLP8 33462493
    579971 6xhx:2f (2.55) BS02 MG ? GO:0003735 ... Q5SLP8 33462493
    579972 6xhx:2g (2.55) BS01 rna ? GO:0000049 ... P17291 33462493
    579973 6xhx:2h (2.55) BS01 rna ? GO:0003735 ... P0DOY9 33462493
    579974 6xhx:2i (2.55) BS01 rna ? GO:0000049 ... P80374 33462493
    579975 6xhx:2j (2.55) BS01 rna ? GO:0000049 ... Q5SHN7 33462493
    579976 6xhx:2j (2.55) BS02 MG ? GO:0000049 ... Q5SHN7 33462493
    579977 6xhx:2k (2.55) BS01 rna ? GO:0003735 ... P80376 33462493
    579978 6xhx:2k (2.55) BS02 MG ? GO:0003735 ... P80376 33462493
    579979 6xhx:2l (2.55) BS01 rna ? GO:0000049 ... Q5SHN3 33462493
    579980 6xhx:2l (2.55) BS02 MG ? GO:0000049 ... Q5SHN3 33462493
    579981 6xhx:2m (2.55) BS01 rna ? GO:0000049 ... P80377 33462493
    579982 6xhx:2n (2.55) BS01 rna ? GO:0003735 ... P0DOY6 33462493
    579983 6xhx:2n (2.55) BS02 ZN ? GO:0003735 ... P0DOY6 33462493
    579984 6xhx:2o (2.55) BS01 rna ? GO:0003735 ... Q5SJ76 33462493
    579985 6xhx:2o (2.55) BS02 rna ? GO:0003735 ... Q5SJ76 33462493
    579986 6xhx:2p (2.55) BS01 rna ? GO:0003735 ... Q5SJH3 33462493
    579987 6xhx:2q (2.55) BS01 rna ? GO:0003735 ... P0DOY7 33462493
    579988 6xhx:2r (2.55) BS01 rna ? GO:0003735 ... Q5SLQ0 33462493
    579989 6xhx:2s (2.55) BS01 rna ? GO:0000028 ... Q5SHP2 33462493
    579990 6xhx:2t (2.55) BS01 rna ? GO:0003723 ... P80380 33462493
    579991 6xhx:2y (2.55) BS01 rna ? GO:0005515 ... P0AD49 33462493
    579992 6xhy:10 (2.6) BS01 rna ? GO:0003735 ... P60493 33462493
    579993 6xhy:10 (2.6) BS02 rna ? GO:0003735 ... P60493 33462493
    579994 6xhy:10 (2.6) BS03 rna ? GO:0003735 ... P60493 33462493
    579995 6xhy:10 (2.6) BS04 MG ? GO:0003735 ... P60493 33462493
    579996 6xhy:10 (2.6) BS05 MG ? GO:0003735 ... P60493 33462493
    579997 6xhy:10 (2.6) BS06 MG ? GO:0003735 ... P60493 33462493
    579998 6xhy:11 (2.6) BS01 rna ? GO:0003735 ... P60494 33462493
    579999 6xhy:11 (2.6) BS02 rna ? GO:0003735 ... P60494 33462493
    580000 6xhy:11 (2.6) BS03 MG ? GO:0003735 ... P60494 33462493

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).