SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2897 2898 2899 2900 2901 2902 2903 2904 2905 2906 2907 2908 2909 2910 2911 2912 2913 2914 2915 2916 2917 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    581201 6xmy:A (1.4) BS01 NAD 1.1.1.262 GO:0000166 ... Q3V872 N/A
    581202 6xmy:A (1.4) BS02 ZN 1.1.1.262 GO:0000166 ... Q3V872 N/A
    581203 6xn1:A (1.8) BS01 XYP N/A GO:0004553 ... N/A 33446650
    581204 6xn1:B (1.8) BS01 XYP N/A GO:0004553 ... N/A 33446650
    581205 6xn2:A (1.652) BS01 XYP N/A GO:0004553 ... N/A 33446650
    581206 6xn2:B (1.652) BS01 XYP N/A GO:0004553 ... N/A 33446650
    581207 6xn2:B (1.652) BS02 XYP N/A GO:0004553 ... N/A 33446650
    581208 6xn2:B (1.652) BS03 XYP N/A GO:0004553 ... N/A 33446650
    581209 6xn3:A (3.0) BS01 rna ? GO:0004519 ... L0CEJ3 35351985
    581210 6xn3:A (3.0) BS02 rna ? GO:0004519 ... L0CEJ3 35351985
    581211 6xn3:B (3.0) BS01 rna ? GO:0003723 ... L0CFH1 35351985
    581212 6xn3:B (3.0) BS02 rna ? GO:0003723 ... L0CFH1 35351985
    581213 6xn3:C (3.0) BS01 rna ? GO:0003723 ... L0CFW2 35351985
    581214 6xn3:D (3.0) BS01 rna ? GO:0003723 ... L0CFW2 35351985
    581215 6xn3:E (3.0) BS01 rna ? GO:0003723 ... L0CFW2 35351985
    581216 6xn3:F (3.0) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581217 6xn3:F (3.0) BS02 rna ? GO:0003723 ... L0CEA3 35351985
    581218 6xn3:G (3.0) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581219 6xn3:G (3.0) BS02 rna ? GO:0003723 ... L0CEA3 35351985
    581220 6xn3:H (3.0) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581221 6xn3:H (3.0) BS02 rna ? GO:0003723 ... L0CEA3 35351985
    581222 6xn3:I (3.0) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581223 6xn3:I (3.0) BS02 rna ? GO:0003723 ... L0CEA3 35351985
    581224 6xn3:J (3.0) BS01 rna ? GO:0003723 ... L0CG31 35351985
    581225 6xn3:J (3.0) BS02 rna ? GO:0003723 ... L0CG31 35351985
    581226 6xn4:A (3.35) BS01 rna ? GO:0004519 ... L0CEJ3 35351985
    581227 6xn4:B (3.35) BS01 rna ? GO:0003723 ... L0CFH1 35351985
    581228 6xn4:C (3.35) BS01 rna ? GO:0003723 ... L0CFW2 35351985
    581229 6xn4:D (3.35) BS01 rna ? GO:0003723 ... L0CFW2 35351985
    581230 6xn4:F (3.35) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581231 6xn4:F (3.35) BS02 rna ? GO:0003723 ... L0CEA3 35351985
    581232 6xn4:G (3.35) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581233 6xn4:G (3.35) BS02 rna ? GO:0003723 ... L0CEA3 35351985
    581234 6xn4:H (3.35) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581235 6xn4:H (3.35) BS02 rna ? GO:0003723 ... L0CEA3 35351985
    581236 6xn4:J (3.35) BS01 rna ? GO:0003723 ... L0CG31 35351985
    581237 6xn4:J (3.35) BS02 rna ? GO:0003723 ... L0CG31 35351985
    581238 6xn5:A (2.97) BS01 rna ? GO:0004519 ... L0CEJ3 35351985
    581239 6xn5:B (2.97) BS01 rna ? GO:0003723 ... L0CFH1 35351985
    581240 6xn5:F (2.97) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581241 6xn5:G (2.97) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581242 6xn5:H (2.97) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581243 6xn5:I (2.97) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581244 6xn5:J (2.97) BS01 rna ? GO:0003723 ... L0CG31 35351985
    581245 6xn6:A (1.7) BS01 7UC 1.14.11.78 GO:0016491 ... A0A3B6UEU3 33361191
    581246 6xn6:A (1.7) BS02 FE2 1.14.11.78 GO:0016491 ... A0A3B6UEU3 33361191
    581247 6xn7:A (3.47) BS01 rna ? GO:0004519 ... L0CEJ3 35351985
    581248 6xn7:B (3.47) BS01 rna ? GO:0003723 ... L0CFH1 35351985
    581249 6xn7:B (3.47) BS02 rna ? GO:0003723 ... L0CFH1 35351985
    581250 6xn7:C (3.47) BS01 rna ? GO:0003723 ... L0CFW2 35351985
    581251 6xn7:D (3.47) BS01 rna ? GO:0003723 ... L0CFW2 35351985
    581252 6xn7:E (3.47) BS01 rna ? GO:0003723 ... L0CFW2 35351985
    581253 6xn7:F (3.47) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581254 6xn7:F (3.47) BS02 rna ? GO:0003723 ... L0CEA3 35351985
    581255 6xn7:G (3.47) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581256 6xn7:G (3.47) BS02 rna ? GO:0003723 ... L0CEA3 35351985
    581257 6xn7:H (3.47) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581258 6xn7:H (3.47) BS02 rna ? GO:0003723 ... L0CEA3 35351985
    581259 6xn7:I (3.47) BS01 rna ? GO:0003723 ... L0CEA3 35351985
    581260 6xn7:I (3.47) BS02 rna ? GO:0003723 ... L0CEA3 35351985
    581261 6xn7:J (3.47) BS01 rna ? GO:0003723 ... L0CG31 35351985
    581262 6xn7:J (3.47) BS02 rna ? GO:0003723 ... L0CG31 35351985
    581263 6xn8:A (1.95) BS01 MG ? GO:0000166 ... A0A1H8YFL8 N/A
    581264 6xn8:A (1.95) BS02 TZD ? GO:0000166 ... A0A1H8YFL8 N/A
    581265 6xn8:A (1.95) BS03 ADP ? GO:0000166 ... A0A1H8YFL8 N/A
    581266 6xn8:A (1.95) BS04 TZD ? GO:0000166 ... A0A1H8YFL8 N/A
    581267 6xn8:B (1.95) BS01 TZD ? GO:0000166 ... A0A1H8YFL8 N/A
    581268 6xn8:B (1.95) BS02 MG ? GO:0000166 ... A0A1H8YFL8 N/A
    581269 6xn8:B (1.95) BS03 TZD ? GO:0000166 ... A0A1H8YFL8 N/A
    581270 6xn8:B (1.95) BS04 ADP ? GO:0000166 ... A0A1H8YFL8 N/A
    581271 6xnc:A (2.11) BS01 1GP 4.2.1.20 GO:0000162 ... P00929 33428374
    581272 6xnc:B (2.11) BS01 NA 4.2.1.20 GO:0000162 ... P0A2K1 33428374
    581273 6xnc:B (2.11) BS02 PLP 4.2.1.20 GO:0000162 ... P0A2K1 33428374
    581274 6xnc:B (2.11) BS03 TRP 4.2.1.20 GO:0000162 ... P0A2K1 33428374
    581275 6xnd:A (1.58) BS01 V8M ? GO:0005576 ... P02701 N/A
    581276 6xnd:B (1.58) BS01 V8M ? GO:0005576 ... P02701 N/A
    581277 6xnd:C (1.58) BS01 V8M ? GO:0005576 ... P02701 N/A
    581278 6xnd:D (1.58) BS01 V8M ? GO:0005576 ... P02701 N/A
    581279 6xne:C (1.96) BS01 MG ? N/A P03069 N/A
    581280 6xng:A (2.79) BS01 V8P ? N/A P11609 34759313
    581281 6xng:A (2.79) BS02 V8P ? N/A P11609 34759313
    581282 6xng:C (2.79) BS01 V8P N/A N/A N/A 34759313
    581283 6xnj:A (1.85) BS01 peptide ? GO:0005794 ... Q9HD26 N/A
    581284 6xnk:A (2.08) BS01 HEC ? GO:0005515 ... P99999 36346995
    581285 6xnk:C (2.08) BS01 HEC ? GO:0005515 ... P99999 36346995
    581286 6xnk:E (2.08) BS01 HEC ? GO:0005515 ... P99999 36346995
    581287 6xnk:G (2.08) BS01 HEC ? GO:0005515 ... P99999 36346995
    581288 6xnn:A (2.49) BS01 V67 ? GO:0002218 ... Q3TBT3 32820126
    581289 6xnn:A (2.49) BS02 V67 ? GO:0002218 ... Q3TBT3 32820126
    581290 6xnn:B (2.49) BS01 V67 ? GO:0002218 ... Q3TBT3 32820126
    581291 6xnn:B (2.49) BS02 V67 ? GO:0002218 ... Q3TBT3 32820126
    581292 6xnp:A (1.77) BS01 V67 ? GO:0002218 ... Q86WV6 32820126 MOAD: ic50=7.8uM
    581293 6xnp:A (1.77) BS02 V67 ? GO:0002218 ... Q86WV6 32820126 MOAD: ic50=7.8uM
    581294 6xnp:B (1.77) BS01 V67 ? GO:0002218 ... Q86WV6 32820126 MOAD: ic50=7.8uM
    581295 6xnp:B (1.77) BS02 V67 ? GO:0002218 ... Q86WV6 32820126 MOAD: ic50=7.8uM
    581296 6xnv:A (2.4) BS01 2BA ? N/A Q8Y8A3 32843560
    581297 6xnv:A (2.4) BS02 2BA ? N/A Q8Y8A3 32843560
    581298 6xnv:B (2.4) BS01 2BA ? N/A Q8Y8A3 32843560
    581299 6xnv:B (2.4) BS02 2BA ? N/A Q8Y8A3 32843560
    581300 6xnx:A (2.7) BS01 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581301 6xnx:A (2.7) BS02 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581302 6xnx:A (2.7) BS03 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581303 6xnx:A (2.7) BS04 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581304 6xnx:A (2.7) BS05 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581305 6xnx:A (2.7) BS06 MG 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581306 6xnx:A (2.7) BS07 MG 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581307 6xnx:A (2.7) BS08 ZN 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581308 6xnx:B (2.7) BS01 dna ? GO:0003677 ... P21784 32945578
    581309 6xnx:B (2.7) BS02 dna ? GO:0003677 ... P21784 32945578
    581310 6xnx:C (2.7) BS01 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581311 6xnx:C (2.7) BS02 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581312 6xnx:C (2.7) BS03 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581313 6xnx:C (2.7) BS04 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581314 6xnx:C (2.7) BS05 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581315 6xnx:C (2.7) BS06 MG 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581316 6xnx:C (2.7) BS07 ZN 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581317 6xnx:D (2.7) BS01 dna ? GO:0003677 ... P21784 32945578
    581318 6xnx:D (2.7) BS02 dna ? GO:0003677 ... P21784 32945578
    581319 6xny:A (2.9) BS01 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581320 6xny:A (2.9) BS02 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581321 6xny:A (2.9) BS03 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581322 6xny:A (2.9) BS04 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581323 6xny:A (2.9) BS05 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581324 6xny:A (2.9) BS06 MG 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581325 6xny:A (2.9) BS07 MG 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581326 6xny:A (2.9) BS08 ZN 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581327 6xny:B (2.9) BS01 dna ? GO:0003677 ... P21784 32945578
    581328 6xny:B (2.9) BS02 dna ? GO:0003677 ... P21784 32945578
    581329 6xny:B (2.9) BS03 dna ? GO:0003677 ... P21784 32945578
    581330 6xny:C (2.9) BS01 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581331 6xny:C (2.9) BS02 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581332 6xny:C (2.9) BS03 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581333 6xny:C (2.9) BS04 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581334 6xny:C (2.9) BS05 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581335 6xny:C (2.9) BS06 MG 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581336 6xny:C (2.9) BS07 MG 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581337 6xny:C (2.9) BS08 ZN 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581338 6xny:D (2.9) BS01 dna ? GO:0003677 ... P21784 32945578
    581339 6xny:D (2.9) BS02 dna ? GO:0003677 ... P21784 32945578
    581340 6xny:D (2.9) BS03 dna ? GO:0003677 ... P21784 32945578
    581341 6xnz:A (3.8) BS01 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581342 6xnz:A (3.8) BS02 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581343 6xnz:A (3.8) BS03 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581344 6xnz:A (3.8) BS04 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581345 6xnz:A (3.8) BS05 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581346 6xnz:A (3.8) BS06 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581347 6xnz:A (3.8) BS07 ZN 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581348 6xnz:B (3.8) BS01 dna ? GO:0003677 ... P21784 32945578
    581349 6xnz:B (3.8) BS02 dna ? GO:0003677 ... P21784 32945578
    581350 6xnz:C (3.8) BS01 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581351 6xnz:C (3.8) BS02 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581352 6xnz:C (3.8) BS03 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581353 6xnz:C (3.8) BS04 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581354 6xnz:C (3.8) BS05 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581355 6xnz:C (3.8) BS06 dna 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581356 6xnz:C (3.8) BS07 ZN 2.3.2.27
    3.1.-.-
    GO:0004519 ... P15919 32945578
    581357 6xnz:D (3.8) BS01 dna ? GO:0003677 ... P21784 32945578
    581358 6xnz:D (3.8) BS02 dna ? GO:0003677 ... P21784 32945578
    581359 6xo2:A (1.6) BS01 PLP ? GO:0019344 ... T1KF23 35063675
    581360 6xo3:A (1.85) BS01 AKG 1.14.11.78 GO:0016491 ... A0A3B6UEU3 33361191
    581361 6xo3:A (1.85) BS02 FE2 1.14.11.78 GO:0016491 ... A0A3B6UEU3 33361191
    581362 6xof:A (1.5) BS01 CA 3.2.1.39 GO:0004553 ... A0A0B5H9B3 33556371
    581363 6xog:B (1.98) BS01 ZN 2.3.2.- GO:0000287 ... Q9UBT2 33631934
    581364 6xog:B (1.98) BS02 VAY 2.3.2.- GO:0000287 ... Q9UBT2 33631934
    581365 6xoh:B (2.226) BS01 ZN 2.3.2.- GO:0000287 ... Q9UBT2 33631934
    581366 6xoh:B (2.226) BS02 VB7 2.3.2.- GO:0000287 ... Q9UBT2 33631934
    581367 6xoi:B (2.0) BS01 ZN 2.3.2.- GO:0000287 ... Q9UBT2 33631934
    581368 6xoi:B (2.0) BS02 VBA 2.3.2.- GO:0000287 ... Q9UBT2 33631934
    581369 6xoj:A (1.45) BS01 7UC 1.14.11.78 GO:0016491 ... A0A3B6UEU3 33361191
    581370 6xoj:A (1.45) BS02 AKG 1.14.11.78 GO:0016491 ... A0A3B6UEU3 33361191
    581371 6xoj:A (1.45) BS03 FE 1.14.11.78 GO:0016491 ... A0A3B6UEU3 33361191
    581372 6xok:A (1.3) BS01 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    581373 6xol:A (2.39) BS01 H8S 3.2.1.17 GO:0003796 ... D9IEF7
    Q96GG9
    33976147
    581374 6xom:A (2.1) BS01 H8V 3.2.1.17 GO:0003796 ... D9IEF7
    Q96GG9
    33976147
    581375 6xon:A (2.8) BS01 H9M 3.2.1.17 GO:0003796 ... D9IEF7
    Q96GG9
    33976147
    581376 6xoo:A (2.06) BS01 H8S 3.2.1.17 GO:0003796 ... D9IEF7
    Q96GG9
    33976147
    581377 6xop:A (2.07) BS01 H9P 3.2.1.17 GO:0003796 ... D9IEF7
    Q96GG9
    33976147
    581378 6xoq:A (2.07) BS01 H9S 3.2.1.17 GO:0003796 ... D9IEF7
    Q96GG9
    33976147
    581379 6xov:A (3.3) BS01 peptide 3.4.24.- GO:0004222 ... Q5JRX3 35383169
    581380 6xov:A (3.3) BS02 peptide 3.4.24.- GO:0004222 ... Q5JRX3 35383169
    581381 6xox:R (3.1) BS01 V6G ? GO:0004888 ... P43220 33177239 BindingDB: EC50=600nM
    581382 6xoy:A (1.64) BS01 1GP 4.2.1.20 GO:0000162 ... P00929 33428374
    581383 6xoy:B (1.64) BS01 VB4 4.2.1.20 GO:0000162 ... P0A2K1 33428374
    581384 6xoy:B (1.64) BS02 NA 4.2.1.20 GO:0000162 ... P0A2K1 33428374
    581385 6xoz:A (2.35) BS01 TFB 1.5.1.2 GO:0004735 ... P32322 33109600
    581386 6xoz:B (2.35) BS01 TFB 1.5.1.2 GO:0004735 ... P32322 33109600
    581387 6xoz:C (2.35) BS01 TFB 1.5.1.2 GO:0004735 ... P32322 33109600
    581388 6xoz:D (2.35) BS01 TFB 1.5.1.2 GO:0004735 ... P32322 33109600
    581389 6xoz:E (2.35) BS01 TFB 1.5.1.2 GO:0004735 ... P32322 33109600
    581390 6xp0:A (1.95) BS01 FPK 1.5.1.2 GO:0004735 ... P32322 33109600
    581391 6xp0:B (1.95) BS01 FPK 1.5.1.2 GO:0004735 ... P32322 33109600
    581392 6xp0:C (1.95) BS01 FPK 1.5.1.2 GO:0004735 ... P32322 33109600
    581393 6xp0:D (1.95) BS01 FPK 1.5.1.2 GO:0004735 ... P32322 33109600
    581394 6xp0:E (1.95) BS01 FPK 1.5.1.2 GO:0004735 ... P32322 33109600
    581395 6xp1:A (1.75) BS01 T2C 1.5.1.2 GO:0004735 ... P32322 33109600
    581396 6xp1:B (1.75) BS01 T2C 1.5.1.2 GO:0004735 ... P32322 33109600
    581397 6xp2:A (2.3) BS01 PRS 1.5.1.2 GO:0004735 ... P32322 33109600
    581398 6xp2:E (2.3) BS01 PRS 1.5.1.2 GO:0004735 ... P32322 33109600
    581399 6xp3:A (1.93) BS01 IQ0 1.5.1.2 GO:0004735 ... P32322 33109600
    581400 6xp3:B (1.93) BS01 IQ0 1.5.1.2 GO:0004735 ... P32322 33109600

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).