SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    581401 6xp3:C (1.93) BS01 IQ0 1.5.1.2 GO:0004735 ... P32322 33109600
    581402 6xp3:D (1.93) BS01 IQ0 1.5.1.2 GO:0004735 ... P32322 33109600
    581403 6xp5:a (4.2) BS01 peptide ? GO:0003712 ... G0SEC7 33571424
    581404 6xp6:A (2.4) BS01 peptide ? GO:0006955 ... P01909 34417258
    581405 6xp6:B (2.4) BS01 peptide ? GO:0006955 ... Q5Y7D3 34417258
    581406 6xp6:D (2.4) BS01 peptide ? GO:0006955 ... P01909 34417258
    581407 6xp6:E (2.4) BS01 peptide ? GO:0006955 ... Q5Y7D3 34417258
    581408 6xp6:H (2.4) BS01 peptide N/A N/A N/A 34417258
    581409 6xp6:J (2.4) BS01 peptide N/A N/A N/A 34417258
    581410 6xp7:A (2.2) BS01 ADP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581411 6xp7:B (2.2) BS01 ADP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581412 6xp7:C (2.2) BS01 ADP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581413 6xp9:A (2.27) BS01 QCG 2.3.1.48 GO:0003677 ... O75469
    Q15788    		 32890685
    581414 6xp9:B (2.27) BS01 QCG 2.3.1.48 GO:0003677 ... O75469
    Q15788    		 32890685
    581415 6xpa:A (2.1) BS01 7UC 1.14.11.78 GO:0016491 ... A0A3B6UEU3 33361191
    581416 6xpa:A (2.1) BS02 VVO 1.14.11.78 GO:0016491 ... A0A3B6UEU3 33361191
    581417 6xpb:B (1.74) BS01 V7D 2.3.2.2
    3.4.19.13
    3.4.19.14    		 GO:0006751 ... P19440 33187988
    581418 6xpc:B (2.26) BS01 GSH 2.3.2.2
    3.4.19.13
    3.4.19.14    		 GO:0006751 ... P19440 33187988
    581419 6xpd:A (3.8) BS01 ZN ? GO:0006812 ... Q8IWU4 32723473
    581420 6xpd:A (3.8) BS02 ZN ? GO:0006812 ... Q8IWU4 32723473
    581421 6xpd:B (3.8) BS01 ZN ? GO:0006812 ... Q8IWU4 32723473
    581422 6xpd:B (3.8) BS02 ZN ? GO:0006812 ... Q8IWU4 32723473
    581423 6xpe:A (4.1) BS01 ZN ? GO:0006812 ... Q8IWU4 32723473
    581424 6xpe:A (4.1) BS02 ZN ? GO:0006812 ... Q8IWU4 32723473
    581425 6xpe:A (4.1) BS03 ZN ? GO:0006812 ... Q8IWU4 32723473
    581426 6xpe:A (4.1) BS04 ZN ? GO:0006812 ... Q8IWU4 32723473
    581427 6xpe:A (4.1) BS05 ZN ? GO:0006812 ... Q8IWU4 32723473
    581428 6xpe:B (4.1) BS01 ZN ? GO:0006812 ... Q8IWU4 32723473
    581429 6xpe:B (4.1) BS02 ZN ? GO:0006812 ... Q8IWU4 32723473
    581430 6xpe:B (4.1) BS03 ZN ? GO:0006812 ... Q8IWU4 32723473
    581431 6xpe:B (4.1) BS04 ZN ? GO:0006812 ... Q8IWU4 32723473
    581432 6xpe:B (4.1) BS05 ZN ? GO:0006812 ... Q8IWU4 32723473
    581433 6xpn:A (2.26) BS01 ZN ? GO:0007155 ... A1B2F3 32781785
    581434 6xpn:B (2.26) BS01 ZN ? GO:0007155 ... A1B2F3 32781785
    581435 6xpp:A (1.55) BS01 ITN 4.1.3.1 GO:0003824 ... P9WKK7 34046597
    581436 6xpp:A (1.55) BS02 MG 4.1.3.1 GO:0003824 ... P9WKK7 34046597
    581437 6xpp:B (1.55) BS01 ITN 4.1.3.1 GO:0003824 ... P9WKK7 34046597
    581438 6xpp:B (1.55) BS02 MG 4.1.3.1 GO:0003824 ... P9WKK7 34046597
    581439 6xpp:C (1.55) BS01 ITN 4.1.3.1 GO:0003824 ... P9WKK7 34046597
    581440 6xpp:C (1.55) BS02 MG 4.1.3.1 GO:0003824 ... P9WKK7 34046597
    581441 6xpp:D (1.55) BS01 ITN 4.1.3.1 GO:0003824 ... P9WKK7 34046597
    581442 6xpp:D (1.55) BS02 MG 4.1.3.1 GO:0003824 ... P9WKK7 34046597
    581443 6xps:A (1.644) BS01 GDP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581444 6xps:B (1.644) BS01 GDP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581445 6xps:C (1.644) BS01 GDP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581446 6xpt:A (2.3) BS01 UDP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581447 6xpt:B (2.3) BS01 UDP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581448 6xpt:C (2.3) BS01 UDP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581449 6xpt:E (2.3) BS01 UDP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581450 6xpt:G (2.3) BS01 UDP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581451 6xpt:H (2.3) BS01 UDP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581452 6xpu:A (1.9) BS01 IDP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581453 6xpu:B (1.9) BS01 IDP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581454 6xpu:C (1.9) BS01 IDP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581455 6xpv:A (2.3) BS01 TYD 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581456 6xpv:B (2.3) BS01 TYD 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581457 6xpv:C (2.3) BS01 TYD 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581458 6xpv:E (2.3) BS01 TYD 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581459 6xpv:G (2.3) BS01 TYD 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581460 6xpv:H (2.3) BS01 TYD 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581461 6xpw:A (1.9) BS01 PO4 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581462 6xpw:B (1.9) BS01 CDP 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581463 6xpw:C (1.9) BS01 PO4 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581464 6xpw:E (1.9) BS01 PO4 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581465 6xpw:G (1.9) BS01 PO4 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581466 6xpw:H (1.9) BS01 PO4 2.7.4.6 GO:0004550 ... Q7Z8P9 33089641
    581467 6xq0:A (2.3) BS01 FUC ? GO:0019031 ... I6T519 34060327
    581468 6xq0:D (2.3) BS01 FUC ? GO:0019031 ... I6T519 34060327
    581469 6xq0:D (2.3) BS02 FUC ? GO:0019031 ... I6T519 34060327
    581470 6xq1:A (1.51) BS01 V74 ? N/A Q15109 34156100
    581471 6xq1:B (1.51) BS01 V74 ? N/A Q15109 34156100
    581472 6xq3:A (1.71) BS01 V6Y ? N/A Q15109 34156100
    581473 6xq3:A (1.71) BS02 V6Y ? N/A Q15109 34156100
    581474 6xq3:A (1.71) BS03 V6Y ? N/A Q15109 34156100
    581475 6xq3:B (1.71) BS01 V6Y ? N/A Q15109 34156100
    581476 6xq3:B (1.71) BS02 V6Y ? N/A Q15109 34156100
    581477 6xq5:A (1.8) BS01 V6M ? N/A Q15109 34156100
    581478 6xq5:B (1.8) BS01 V6M ? N/A Q15109 34156100
    581479 6xq6:A (1.9) BS01 V6P ? N/A Q15109 34156100
    581480 6xq6:A (1.9) BS02 V6P ? N/A Q15109 34156100
    581481 6xq6:B (1.9) BS01 V6P ? N/A Q15109 34156100
    581482 6xq6:B (1.9) BS02 V6P ? N/A Q15109 34156100
    581483 6xq7:A (1.8) BS01 V6V ? N/A Q15109 34156100
    581484 6xq7:A (1.8) BS02 V6V ? N/A Q15109 34156100
    581485 6xq7:B (1.8) BS01 V6V ? N/A Q15109 34156100
    581486 6xq7:B (1.8) BS02 V6V ? N/A Q15109 34156100
    581487 6xq7:B (1.8) BS03 V6V ? N/A Q15109 34156100
    581488 6xq7:B (1.8) BS04 V6V ? N/A Q15109 34156100
    581489 6xq7:B (1.8) BS05 V6V ? N/A Q15109 34156100
    581490 6xq8:A (1.82) BS01 V6M ? N/A Q15109 34156100
    581491 6xq8:A (1.82) BS02 V6P ? N/A Q15109 34156100
    581492 6xq8:B (1.82) BS01 V6P ? N/A Q15109 34156100
    581493 6xq8:B (1.82) BS02 V6M ? N/A Q15109 34156100
    581494 6xq8:B (1.82) BS03 V6P ? N/A Q15109 34156100
    581495 6xq9:A (2.3) BS01 V6S ? N/A Q15109 34156100
    581496 6xq9:A (2.3) BS02 V6S ? N/A Q15109 34156100
    581497 6xq9:A (2.3) BS03 V6M ? N/A Q15109 34156100
    581498 6xq9:B (2.3) BS01 V6S ? N/A Q15109 34156100
    581499 6xq9:B (2.3) BS02 V6S ? N/A Q15109 34156100
    581500 6xq9:B (2.3) BS03 V6M ? N/A Q15109 34156100
    581501 6xqa:A (2.16) BS01 peptide ? N/A A0A5H2UYS3 34006841
    581502 6xqa:D (2.16) BS01 peptide ? N/A A0A5H2UYS3 34006841
    581503 6xqa:D (2.16) BS02 MG ? N/A A0A5H2UYS3 34006841
    581504 6xqb:A (3.4) BS01 rna 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0003723 ... P0DTD1 N/A
    581505 6xqb:A (3.4) BS02 rna 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0003723 ... P0DTD1 N/A
    581506 6xqb:A (3.4) BS03 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0003723 ... P0DTD1 N/A
    581507 6xqb:A (3.4) BS04 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0003723 ... P0DTD1 N/A
    581508 6xqb:A (3.4) BS05 MG 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0003723 ... P0DTD1 N/A
    581509 6xqd:10 (2.8) BS01 rna ? GO:0003735 ... P60493 32817463
    581510 6xqd:10 (2.8) BS02 rna ? GO:0003735 ... P60493 32817463
    581511 6xqd:10 (2.8) BS03 rna ? GO:0003735 ... P60493 32817463
    581512 6xqd:10 (2.8) BS04 MG ? GO:0003735 ... P60493 32817463
    581513 6xqd:10 (2.8) BS05 MG ? GO:0003735 ... P60493 32817463
    581514 6xqd:10 (2.8) BS06 MG ? GO:0003735 ... P60493 32817463
    581515 6xqd:11 (2.8) BS01 rna ? GO:0003735 ... P60494 32817463
    581516 6xqd:11 (2.8) BS02 MG ? GO:0003735 ... P60494 32817463
    581517 6xqd:12 (2.8) BS01 rna ? GO:0003735 ... Q5SHP6 32817463
    581518 6xqd:12 (2.8) BS02 MG ? GO:0003735 ... Q5SHP6 32817463
    581519 6xqd:13 (2.8) BS01 rna ? GO:0003735 ... Q5SHQ6 32817463
    581520 6xqd:13 (2.8) BS02 rna ? GO:0003735 ... Q5SHQ6 32817463
    581521 6xqd:13 (2.8) BS03 MG ? GO:0003735 ... Q5SHQ6 32817463
    581522 6xqd:14 (2.8) BS01 rna ? GO:0003735 ... Q5SJE1 32817463
    581523 6xqd:14 (2.8) BS02 ZN ? GO:0003735 ... Q5SJE1 32817463
    581524 6xqd:15 (2.8) BS01 rna ? GO:0003735 ... P80339 32817463
    581525 6xqd:15 (2.8) BS02 MG ? GO:0003735 ... P80339 32817463
    581526 6xqd:15 (2.8) BS03 MG ? GO:0003735 ... P80339 32817463
    581527 6xqd:15 (2.8) BS04 MG ? GO:0003735 ... P80339 32817463
    581528 6xqd:15 (2.8) BS05 ZN ? GO:0003735 ... P80339 32817463
    581529 6xqd:16 (2.8) BS01 rna ? GO:0000049 ... P35871 32817463
    581530 6xqd:16 (2.8) BS02 MG ? GO:0000049 ... P35871 32817463
    581531 6xqd:16 (2.8) BS03 ZN ? GO:0000049 ... P35871 32817463
    581532 6xqd:17 (2.8) BS01 rna ? GO:0003735 ... P80340 32817463
    581533 6xqd:17 (2.8) BS02 MG ? GO:0003735 ... P80340 32817463
    581534 6xqd:17 (2.8) BS03 MG ? GO:0003735 ... P80340 32817463
    581535 6xqd:18 (2.8) BS01 rna ? GO:0003735 ... Q5SKU1 32817463
    581536 6xqd:18 (2.8) BS02 MG ? GO:0003735 ... Q5SKU1 32817463
    581537 6xqd:18 (2.8) BS03 MG ? GO:0003735 ... Q5SKU1 32817463
    581538 6xqd:18 (2.8) BS04 MG ? GO:0003735 ... Q5SKU1 32817463
    581539 6xqd:18 (2.8) BS05 MG ? GO:0003735 ... Q5SKU1 32817463
    581540 6xqd:19 (2.8) BS01 rna ? GO:0003735 ... Q5SHR2 32817463
    581541 6xqd:19 (2.8) BS02 ZN ? GO:0003735 ... Q5SHR2 32817463
    581542 6xqd:1D (2.8) BS01 rna ? GO:0002181 ... P60405 32817463
    581543 6xqd:1D (2.8) BS02 rna ? GO:0002181 ... P60405 32817463
    581544 6xqd:1D (2.8) BS03 MG ? GO:0002181 ... P60405 32817463
    581545 6xqd:1D (2.8) BS04 MG ? GO:0002181 ... P60405 32817463
    581546 6xqd:1D (2.8) BS05 MG ? GO:0002181 ... P60405 32817463
    581547 6xqd:1D (2.8) BS06 MG ? GO:0002181 ... P60405 32817463
    581548 6xqd:1D (2.8) BS07 MG ? GO:0002181 ... P60405 32817463
    581549 6xqd:1D (2.8) BS08 MG ? GO:0002181 ... P60405 32817463
    581550 6xqd:1D (2.8) BS09 MG ? GO:0002181 ... P60405 32817463
    581551 6xqd:1D (2.8) BS10 MG ? GO:0002181 ... P60405 32817463
    581552 6xqd:1D (2.8) BS11 MG ? GO:0002181 ... P60405 32817463
    581553 6xqd:1D (2.8) BS12 MG ? GO:0002181 ... P60405 32817463
    581554 6xqd:1E (2.8) BS01 rna ? GO:0003735 ... Q5SHN8 32817463
    581555 6xqd:1E (2.8) BS02 MG ? GO:0003735 ... Q5SHN8 32817463
    581556 6xqd:1E (2.8) BS03 MG ? GO:0003735 ... Q5SHN8 32817463
    581557 6xqd:1E (2.8) BS04 MG ? GO:0003735 ... Q5SHN8 32817463
    581558 6xqd:1E (2.8) BS05 MG ? GO:0003735 ... Q5SHN8 32817463
    581559 6xqd:1E (2.8) BS06 MG ? GO:0003735 ... Q5SHN8 32817463
    581560 6xqd:1F (2.8) BS01 rna ? GO:0003735 ... Q5SHN9 32817463
    581561 6xqd:1F (2.8) BS02 MG ? GO:0003735 ... Q5SHN9 32817463
    581562 6xqd:1F (2.8) BS03 MG ? GO:0003735 ... Q5SHN9 32817463
    581563 6xqd:1F (2.8) BS04 MG ? GO:0003735 ... Q5SHN9 32817463
    581564 6xqd:1F (2.8) BS05 MG ? GO:0003735 ... Q5SHN9 32817463
    581565 6xqd:1F (2.8) BS06 MG ? GO:0003735 ... Q5SHN9 32817463
    581566 6xqd:1F (2.8) BS07 MG ? GO:0003735 ... Q5SHN9 32817463
    581567 6xqd:1F (2.8) BS08 MG ? GO:0003735 ... Q5SHN9 32817463
    581568 6xqd:1F (2.8) BS09 MG ? GO:0003735 ... Q5SHN9 32817463
    581569 6xqd:1G (2.8) BS01 rna ? GO:0000049 ... Q5SHQ0 32817463
    581570 6xqd:1G (2.8) BS02 rna ? GO:0000049 ... Q5SHQ0 32817463
    581571 6xqd:1G (2.8) BS03 rna ? GO:0000049 ... Q5SHQ0 32817463
    581572 6xqd:1H (2.8) BS01 rna ? GO:0002181 ... P0DOY8 32817463
    581573 6xqd:1I (2.8) BS01 rna ? GO:0003735 ... Q5SLQ1 32817463
    581574 6xqd:1N (2.8) BS01 rna ? GO:0003729 ... P60488 32817463
    581575 6xqd:1N (2.8) BS02 MG ? GO:0003729 ... P60488 32817463
    581576 6xqd:1N (2.8) BS03 MG ? GO:0003729 ... P60488 32817463
    581577 6xqd:1N (2.8) BS04 MG ? GO:0003729 ... P60488 32817463
    581578 6xqd:1O (2.8) BS01 rna ? GO:0003735 ... Q5SHP8 32817463
    581579 6xqd:1O (2.8) BS02 rna ? GO:0003735 ... Q5SHP8 32817463
    581580 6xqd:1O (2.8) BS03 MG ? GO:0003735 ... Q5SHP8 32817463
    581581 6xqd:1O (2.8) BS04 MG ? GO:0003735 ... Q5SHP8 32817463
    581582 6xqd:1P (2.8) BS01 rna ? GO:0003735 ... Q5SHQ7 32817463
    581583 6xqd:1P (2.8) BS02 MG ? GO:0003735 ... Q5SHQ7 32817463
    581584 6xqd:1P (2.8) BS03 MG ? GO:0003735 ... Q5SHQ7 32817463
    581585 6xqd:1Q (2.8) BS01 rna ? GO:0000049 ... P60489 32817463
    581586 6xqd:1Q (2.8) BS02 rna ? GO:0000049 ... P60489 32817463
    581587 6xqd:1Q (2.8) BS03 MG ? GO:0000049 ... P60489 32817463
    581588 6xqd:1Q (2.8) BS04 MG ? GO:0000049 ... P60489 32817463
    581589 6xqd:1Q (2.8) BS05 MG ? GO:0000049 ... P60489 32817463
    581590 6xqd:1Q (2.8) BS06 MG ? GO:0000049 ... P60489 32817463
    581591 6xqd:1R (2.8) BS01 rna ? GO:0003735 ... Q9Z9H5 32817463
    581592 6xqd:1R (2.8) BS02 MG ? GO:0003735 ... Q9Z9H5 32817463
    581593 6xqd:1R (2.8) BS03 MG ? GO:0003735 ... Q9Z9H5 32817463
    581594 6xqd:1R (2.8) BS04 MG ? GO:0003735 ... Q9Z9H5 32817463
    581595 6xqd:1S (2.8) BS01 rna ? GO:0003735 ... Q5SHQ4 32817463
    581596 6xqd:1S (2.8) BS02 rna ? GO:0003735 ... Q5SHQ4 32817463
    581597 6xqd:1S (2.8) BS03 MG ? GO:0003735 ... Q5SHQ4 32817463
    581598 6xqd:1T (2.8) BS01 rna ? GO:0003735 ... P60490 32817463
    581599 6xqd:1T (2.8) BS02 rna ? GO:0003735 ... P60490 32817463
    581600 6xqd:1U (2.8) BS01 rna ? GO:0000027 ... P60491 32817463
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).