SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    581601 6xqd:1U (2.8) BS02 MG ? GO:0000027 ... P60491 32817463
    581602 6xqd:1U (2.8) BS03 MG ? GO:0000027 ... P60491 32817463
    581603 6xqd:1U (2.8) BS04 MG ? GO:0000027 ... P60491 32817463
    581604 6xqd:1U (2.8) BS05 MG ? GO:0000027 ... P60491 32817463
    581605 6xqd:1U (2.8) BS06 MG ? GO:0000027 ... P60491 32817463
    581606 6xqd:1U (2.8) BS07 MG ? GO:0000027 ... P60491 32817463
    581607 6xqd:1V (2.8) BS01 rna ? GO:0003723 ... P60492 32817463
    581608 6xqd:1V (2.8) BS02 MG ? GO:0003723 ... P60492 32817463
    581609 6xqd:1V (2.8) BS03 MG ? GO:0003723 ... P60492 32817463
    581610 6xqd:1V (2.8) BS04 MG ? GO:0003723 ... P60492 32817463
    581611 6xqd:1V (2.8) BS05 MG ? GO:0003723 ... P60492 32817463
    581612 6xqd:1V (2.8) BS06 MG ? GO:0003723 ... P60492 32817463
    581613 6xqd:1V (2.8) BS07 MG ? GO:0003723 ... P60492 32817463
    581614 6xqd:1V (2.8) BS08 MG ? GO:0003723 ... P60492 32817463
    581615 6xqd:1W (2.8) BS01 rna ? GO:0003735 ... Q5SHP3 32817463
    581616 6xqd:1W (2.8) BS02 MG ? GO:0003735 ... Q5SHP3 32817463
    581617 6xqd:1W (2.8) BS03 MG ? GO:0003735 ... Q5SHP3 32817463
    581618 6xqd:1W (2.8) BS04 MG ? GO:0003735 ... Q5SHP3 32817463
    581619 6xqd:1W (2.8) BS05 MG ? GO:0003735 ... Q5SHP3 32817463
    581620 6xqd:1X (2.8) BS01 rna ? GO:0003735 ... Q5SHP0 32817463
    581621 6xqd:1X (2.8) BS02 MG ? GO:0003735 ... Q5SHP0 32817463
    581622 6xqd:1X (2.8) BS03 MG ? GO:0003735 ... Q5SHP0 32817463
    581623 6xqd:1X (2.8) BS04 MG ? GO:0003735 ... Q5SHP0 32817463
    581624 6xqd:1Y (2.8) BS01 rna ? GO:0003723 ... Q5SHP9 32817463
    581625 6xqd:1Y (2.8) BS02 MG ? GO:0003723 ... Q5SHP9 32817463
    581626 6xqd:1Y (2.8) BS03 ZN ? GO:0003723 ... Q5SHP9 32817463
    581627 6xqd:1Z (2.8) BS01 rna ? GO:0003723 ... Q5SHZ1 32817463
    581628 6xqd:1Z (2.8) BS02 rna ? GO:0003723 ... Q5SHZ1 32817463
    581629 6xqd:1b (2.8) BS01 rna ? GO:0003735 ... P80371 32817463
    581630 6xqd:1b (2.8) BS02 MG ? GO:0003735 ... P80371 32817463
    581631 6xqd:1c (2.8) BS01 rna ? GO:0003676 ... P80372 32817463
    581632 6xqd:1d (2.8) BS01 rna ? GO:0003723 ... P80373 32817463
    581633 6xqd:1d (2.8) BS02 SF4 ? GO:0003723 ... P80373 32817463
    581634 6xqd:1e (2.8) BS01 rna ? GO:0003723 ... Q5SHQ5 32817463
    581635 6xqd:1e (2.8) BS02 MG ? GO:0003723 ... Q5SHQ5 32817463
    581636 6xqd:1e (2.8) BS03 MG ? GO:0003723 ... Q5SHQ5 32817463
    581637 6xqd:1f (2.8) BS01 rna ? GO:0003735 ... Q5SLP8 32817463
    581638 6xqd:1g (2.8) BS01 rna ? GO:0000049 ... P17291 32817463
    581639 6xqd:1h (2.8) BS01 rna ? GO:0003735 ... P0DOY9 32817463
    581640 6xqd:1i (2.8) BS01 rna ? GO:0000049 ... P80374 32817463
    581641 6xqd:1i (2.8) BS02 rna ? GO:0000049 ... P80374 32817463
    581642 6xqd:1j (2.8) BS01 rna ? GO:0000049 ... Q5SHN7 32817463
    581643 6xqd:1k (2.8) BS01 rna ? GO:0003735 ... P80376 32817463
    581644 6xqd:1k (2.8) BS02 MG ? GO:0003735 ... P80376 32817463
    581645 6xqd:1l (2.8) BS01 rna ? GO:0000049 ... Q5SHN3 32817463
    581646 6xqd:1l (2.8) BS02 MG ? GO:0000049 ... Q5SHN3 32817463
    581647 6xqd:1m (2.8) BS01 rna ? GO:0000049 ... P80377 32817463
    581648 6xqd:1m (2.8) BS02 rna ? GO:0000049 ... P80377 32817463
    581649 6xqd:1m (2.8) BS03 MG ? GO:0000049 ... P80377 32817463
    581650 6xqd:1m (2.8) BS04 MG ? GO:0000049 ... P80377 32817463
    581651 6xqd:1n (2.8) BS01 rna ? GO:0003735 ... P0DOY6 32817463
    581652 6xqd:1n (2.8) BS02 MG ? GO:0003735 ... P0DOY6 32817463
    581653 6xqd:1n (2.8) BS03 ZN ? GO:0003735 ... P0DOY6 32817463
    581654 6xqd:1o (2.8) BS01 rna ? GO:0003735 ... Q5SJ76 32817463
    581655 6xqd:1o (2.8) BS02 rna ? GO:0003735 ... Q5SJ76 32817463
    581656 6xqd:1p (2.8) BS01 rna ? GO:0003735 ... Q5SJH3 32817463
    581657 6xqd:1q (2.8) BS01 rna ? GO:0003735 ... P0DOY7 32817463
    581658 6xqd:1r (2.8) BS01 rna ? GO:0003735 ... Q5SLQ0 32817463
    581659 6xqd:1s (2.8) BS01 rna ? GO:0000028 ... Q5SHP2 32817463
    581660 6xqd:1t (2.8) BS01 rna ? GO:0003723 ... P80380 32817463
    581661 6xqd:20 (2.8) BS01 rna ? GO:0003735 ... P60493 32817463
    581662 6xqd:20 (2.8) BS02 rna ? GO:0003735 ... P60493 32817463
    581663 6xqd:20 (2.8) BS03 rna ? GO:0003735 ... P60493 32817463
    581664 6xqd:21 (2.8) BS01 rna ? GO:0003735 ... P60494 32817463
    581665 6xqd:22 (2.8) BS01 rna ? GO:0003735 ... Q5SHP6 32817463
    581666 6xqd:23 (2.8) BS01 rna ? GO:0003735 ... Q5SHQ6 32817463
    581667 6xqd:23 (2.8) BS02 rna ? GO:0003735 ... Q5SHQ6 32817463
    581668 6xqd:24 (2.8) BS01 rna ? GO:0003735 ... Q5SJE1 32817463
    581669 6xqd:24 (2.8) BS02 ZN ? GO:0003735 ... Q5SJE1 32817463
    581670 6xqd:25 (2.8) BS01 rna ? GO:0003735 ... P80339 32817463
    581671 6xqd:25 (2.8) BS02 MG ? GO:0003735 ... P80339 32817463
    581672 6xqd:25 (2.8) BS03 MG ? GO:0003735 ... P80339 32817463
    581673 6xqd:25 (2.8) BS04 ZN ? GO:0003735 ... P80339 32817463
    581674 6xqd:26 (2.8) BS01 rna ? GO:0000049 ... P35871 32817463
    581675 6xqd:26 (2.8) BS02 ZN ? GO:0000049 ... P35871 32817463
    581676 6xqd:27 (2.8) BS01 rna ? GO:0003735 ... P80340 32817463
    581677 6xqd:28 (2.8) BS01 rna ? GO:0003735 ... Q5SKU1 32817463
    581678 6xqd:28 (2.8) BS02 MG ? GO:0003735 ... Q5SKU1 32817463
    581679 6xqd:29 (2.8) BS01 rna ? GO:0003735 ... Q5SHR2 32817463
    581680 6xqd:29 (2.8) BS02 MG ? GO:0003735 ... Q5SHR2 32817463
    581681 6xqd:29 (2.8) BS03 ZN ? GO:0003735 ... Q5SHR2 32817463
    581682 6xqd:2D (2.8) BS01 rna ? GO:0002181 ... P60405 32817463
    581683 6xqd:2D (2.8) BS02 rna ? GO:0002181 ... P60405 32817463
    581684 6xqd:2D (2.8) BS03 MG ? GO:0002181 ... P60405 32817463
    581685 6xqd:2D (2.8) BS04 MG ? GO:0002181 ... P60405 32817463
    581686 6xqd:2D (2.8) BS05 MG ? GO:0002181 ... P60405 32817463
    581687 6xqd:2D (2.8) BS06 MG ? GO:0002181 ... P60405 32817463
    581688 6xqd:2D (2.8) BS07 MG ? GO:0002181 ... P60405 32817463
    581689 6xqd:2D (2.8) BS08 MG ? GO:0002181 ... P60405 32817463
    581690 6xqd:2E (2.8) BS01 rna ? GO:0003735 ... Q5SHN8 32817463
    581691 6xqd:2E (2.8) BS02 MG ? GO:0003735 ... Q5SHN8 32817463
    581692 6xqd:2F (2.8) BS01 rna ? GO:0003735 ... Q5SHN9 32817463
    581693 6xqd:2F (2.8) BS02 MG ? GO:0003735 ... Q5SHN9 32817463
    581694 6xqd:2F (2.8) BS03 MG ? GO:0003735 ... Q5SHN9 32817463
    581695 6xqd:2F (2.8) BS04 MG ? GO:0003735 ... Q5SHN9 32817463
    581696 6xqd:2G (2.8) BS01 rna ? GO:0000049 ... Q5SHQ0 32817463
    581697 6xqd:2G (2.8) BS02 rna ? GO:0000049 ... Q5SHQ0 32817463
    581698 6xqd:2G (2.8) BS03 rna ? GO:0000049 ... Q5SHQ0 32817463
    581699 6xqd:2H (2.8) BS01 rna ? GO:0002181 ... P0DOY8 32817463
    581700 6xqd:2I (2.8) BS01 rna ? GO:0003735 ... Q5SLQ1 32817463
    581701 6xqd:2N (2.8) BS01 rna ? GO:0003729 ... P60488 32817463
    581702 6xqd:2O (2.8) BS01 rna ? GO:0003735 ... Q5SHP8 32817463
    581703 6xqd:2O (2.8) BS02 rna ? GO:0003735 ... Q5SHP8 32817463
    581704 6xqd:2P (2.8) BS01 rna ? GO:0003735 ... Q5SHQ7 32817463
    581705 6xqd:2Q (2.8) BS01 rna ? GO:0000049 ... P60489 32817463
    581706 6xqd:2Q (2.8) BS02 rna ? GO:0000049 ... P60489 32817463
    581707 6xqd:2Q (2.8) BS03 MG ? GO:0000049 ... P60489 32817463
    581708 6xqd:2Q (2.8) BS04 MG ? GO:0000049 ... P60489 32817463
    581709 6xqd:2R (2.8) BS01 rna ? GO:0003735 ... Q9Z9H5 32817463
    581710 6xqd:2S (2.8) BS01 rna ? GO:0003735 ... Q5SHQ4 32817463
    581711 6xqd:2S (2.8) BS02 rna ? GO:0003735 ... Q5SHQ4 32817463
    581712 6xqd:2T (2.8) BS01 rna ? GO:0003735 ... P60490 32817463
    581713 6xqd:2T (2.8) BS02 rna ? GO:0003735 ... P60490 32817463
    581714 6xqd:2U (2.8) BS01 rna ? GO:0000027 ... P60491 32817463
    581715 6xqd:2U (2.8) BS02 MG ? GO:0000027 ... P60491 32817463
    581716 6xqd:2V (2.8) BS01 rna ? GO:0003723 ... P60492 32817463
    581717 6xqd:2V (2.8) BS02 MG ? GO:0003723 ... P60492 32817463
    581718 6xqd:2V (2.8) BS03 MG ? GO:0003723 ... P60492 32817463
    581719 6xqd:2W (2.8) BS01 rna ? GO:0003735 ... Q5SHP3 32817463
    581720 6xqd:2X (2.8) BS01 rna ? GO:0003735 ... Q5SHP0 32817463
    581721 6xqd:2X (2.8) BS02 MG ? GO:0003735 ... Q5SHP0 32817463
    581722 6xqd:2Y (2.8) BS01 rna ? GO:0003723 ... Q5SHP9 32817463
    581723 6xqd:2Y (2.8) BS02 ZN ? GO:0003723 ... Q5SHP9 32817463
    581724 6xqd:2Z (2.8) BS01 rna ? GO:0003723 ... Q5SHZ1 32817463
    581725 6xqd:2Z (2.8) BS02 rna ? GO:0003723 ... Q5SHZ1 32817463
    581726 6xqd:2Z (2.8) BS03 MG ? GO:0003723 ... Q5SHZ1 32817463
    581727 6xqd:2b (2.8) BS01 rna ? GO:0003735 ... P80371 32817463
    581728 6xqd:2c (2.8) BS01 rna ? GO:0003676 ... P80372 32817463
    581729 6xqd:2d (2.8) BS01 rna ? GO:0003723 ... P80373 32817463
    581730 6xqd:2d (2.8) BS02 SF4 ? GO:0003723 ... P80373 32817463
    581731 6xqd:2e (2.8) BS01 rna ? GO:0003723 ... Q5SHQ5 32817463
    581732 6xqd:2e (2.8) BS02 MG ? GO:0003723 ... Q5SHQ5 32817463
    581733 6xqd:2f (2.8) BS01 rna ? GO:0003735 ... Q5SLP8 32817463
    581734 6xqd:2f (2.8) BS02 MG ? GO:0003735 ... Q5SLP8 32817463
    581735 6xqd:2g (2.8) BS01 rna ? GO:0000049 ... P17291 32817463
    581736 6xqd:2h (2.8) BS01 rna ? GO:0003735 ... P0DOY9 32817463
    581737 6xqd:2i (2.8) BS01 rna ? GO:0000049 ... P80374 32817463
    581738 6xqd:2j (2.8) BS01 rna ? GO:0000049 ... Q5SHN7 32817463
    581739 6xqd:2j (2.8) BS02 MG ? GO:0000049 ... Q5SHN7 32817463
    581740 6xqd:2j (2.8) BS03 MG ? GO:0000049 ... Q5SHN7 32817463
    581741 6xqd:2k (2.8) BS01 rna ? GO:0003735 ... P80376 32817463
    581742 6xqd:2k (2.8) BS02 MG ? GO:0003735 ... P80376 32817463
    581743 6xqd:2l (2.8) BS01 rna ? GO:0000049 ... Q5SHN3 32817463
    581744 6xqd:2l (2.8) BS02 MG ? GO:0000049 ... Q5SHN3 32817463
    581745 6xqd:2l (2.8) BS03 MG ? GO:0000049 ... Q5SHN3 32817463
    581746 6xqd:2m (2.8) BS01 rna ? GO:0000049 ... P80377 32817463
    581747 6xqd:2n (2.8) BS01 rna ? GO:0003735 ... P0DOY6 32817463
    581748 6xqd:2n (2.8) BS02 ZN ? GO:0003735 ... P0DOY6 32817463
    581749 6xqd:2o (2.8) BS01 rna ? GO:0003735 ... Q5SJ76 32817463
    581750 6xqd:2o (2.8) BS02 rna ? GO:0003735 ... Q5SJ76 32817463
    581751 6xqd:2p (2.8) BS01 rna ? GO:0003735 ... Q5SJH3 32817463
    581752 6xqd:2q (2.8) BS01 rna ? GO:0003735 ... P0DOY7 32817463
    581753 6xqd:2q (2.8) BS02 MG ? GO:0003735 ... P0DOY7 32817463
    581754 6xqd:2r (2.8) BS01 rna ? GO:0003735 ... Q5SLQ0 32817463
    581755 6xqd:2s (2.8) BS01 rna ? GO:0000028 ... Q5SHP2 32817463
    581756 6xqd:2t (2.8) BS01 rna ? GO:0003723 ... P80380 32817463
    581757 6xqd:2t (2.8) BS02 MG ? GO:0003723 ... P80380 32817463
    581758 6xqe:10 (3.0) BS01 rna ? GO:0003735 ... P60493 32817463
    581759 6xqe:10 (3.0) BS02 rna ? GO:0003735 ... P60493 32817463
    581760 6xqe:10 (3.0) BS03 MG ? GO:0003735 ... P60493 32817463
    581761 6xqe:10 (3.0) BS04 MG ? GO:0003735 ... P60493 32817463
    581762 6xqe:11 (3.0) BS01 rna ? GO:0003735 ... P60494 32817463
    581763 6xqe:11 (3.0) BS02 MG ? GO:0003735 ... P60494 32817463
    581764 6xqe:12 (3.0) BS01 rna ? GO:0003735 ... Q5SHP6 32817463
    581765 6xqe:12 (3.0) BS02 MG ? GO:0003735 ... Q5SHP6 32817463
    581766 6xqe:12 (3.0) BS03 MG ? GO:0003735 ... Q5SHP6 32817463
    581767 6xqe:13 (3.0) BS01 rna ? GO:0003735 ... Q5SHQ6 32817463
    581768 6xqe:13 (3.0) BS02 rna ? GO:0003735 ... Q5SHQ6 32817463
    581769 6xqe:13 (3.0) BS03 MG ? GO:0003735 ... Q5SHQ6 32817463
    581770 6xqe:14 (3.0) BS01 rna ? GO:0003735 ... Q5SJE1 32817463
    581771 6xqe:14 (3.0) BS02 ZN ? GO:0003735 ... Q5SJE1 32817463
    581772 6xqe:15 (3.0) BS01 rna ? GO:0003735 ... P80339 32817463
    581773 6xqe:15 (3.0) BS02 MG ? GO:0003735 ... P80339 32817463
    581774 6xqe:15 (3.0) BS03 ZN ? GO:0003735 ... P80339 32817463
    581775 6xqe:16 (3.0) BS01 rna ? GO:0000049 ... P35871 32817463
    581776 6xqe:16 (3.0) BS02 MG ? GO:0000049 ... P35871 32817463
    581777 6xqe:16 (3.0) BS03 MG ? GO:0000049 ... P35871 32817463
    581778 6xqe:16 (3.0) BS04 ZN ? GO:0000049 ... P35871 32817463
    581779 6xqe:17 (3.0) BS01 rna ? GO:0003735 ... P80340 32817463
    581780 6xqe:17 (3.0) BS02 MG ? GO:0003735 ... P80340 32817463
    581781 6xqe:17 (3.0) BS03 MG ? GO:0003735 ... P80340 32817463
    581782 6xqe:18 (3.0) BS01 rna ? GO:0003735 ... Q5SKU1 32817463
    581783 6xqe:18 (3.0) BS02 MG ? GO:0003735 ... Q5SKU1 32817463
    581784 6xqe:18 (3.0) BS03 MG ? GO:0003735 ... Q5SKU1 32817463
    581785 6xqe:19 (3.0) BS01 rna ? GO:0003735 ... Q5SHR2 32817463
    581786 6xqe:19 (3.0) BS02 ZN ? GO:0003735 ... Q5SHR2 32817463
    581787 6xqe:1D (3.0) BS01 rna ? GO:0002181 ... P60405 32817463
    581788 6xqe:1D (3.0) BS02 rna ? GO:0002181 ... P60405 32817463
    581789 6xqe:1D (3.0) BS03 MG ? GO:0002181 ... P60405 32817463
    581790 6xqe:1D (3.0) BS04 MG ? GO:0002181 ... P60405 32817463
    581791 6xqe:1D (3.0) BS05 MG ? GO:0002181 ... P60405 32817463
    581792 6xqe:1D (3.0) BS06 MG ? GO:0002181 ... P60405 32817463
    581793 6xqe:1D (3.0) BS07 MG ? GO:0002181 ... P60405 32817463
    581794 6xqe:1D (3.0) BS08 MG ? GO:0002181 ... P60405 32817463
    581795 6xqe:1D (3.0) BS09 MG ? GO:0002181 ... P60405 32817463
    581796 6xqe:1E (3.0) BS01 rna ? GO:0003735 ... Q5SHN8 32817463
    581797 6xqe:1E (3.0) BS02 MG ? GO:0003735 ... Q5SHN8 32817463
    581798 6xqe:1E (3.0) BS03 MG ? GO:0003735 ... Q5SHN8 32817463
    581799 6xqe:1E (3.0) BS04 MG ? GO:0003735 ... Q5SHN8 32817463
    581800 6xqe:1E (3.0) BS05 MG ? GO:0003735 ... Q5SHN8 32817463
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).