SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    58001 1vps:A (1.9) BS01 GAL ? GO:0005198 ... P49302 9305654
    58002 1vps:A (1.9) BS02 SIA ? GO:0005198 ... P49302 9305654
    58003 1vps:A (1.9) BS03 SIA ? GO:0005198 ... P49302 9305654
    58004 1vps:B (1.9) BS01 GAL ? GO:0005198 ... P49302 9305654
    58005 1vps:B (1.9) BS02 SIA ? GO:0005198 ... P49302 9305654
    58006 1vps:B (1.9) BS03 SIA ? GO:0005198 ... P49302 9305654
    58007 1vps:C (1.9) BS01 GAL ? GO:0005198 ... P49302 9305654
    58008 1vps:C (1.9) BS02 SIA ? GO:0005198 ... P49302 9305654
    58009 1vps:C (1.9) BS03 SIA ? GO:0005198 ... P49302 9305654
    58010 1vps:D (1.9) BS01 GAL ? GO:0005198 ... P49302 9305654
    58011 1vps:D (1.9) BS02 SIA ? GO:0005198 ... P49302 9305654
    58012 1vps:D (1.9) BS03 SIA ? GO:0005198 ... P49302 9305654
    58013 1vps:E (1.9) BS01 GAL ? GO:0005198 ... P49302 9305654
    58014 1vps:E (1.9) BS02 SIA ? GO:0005198 ... P49302 9305654
    58015 1vps:E (1.9) BS03 SIA ? GO:0005198 ... P49302 9305654
    58016 1vpt:A (1.8) BS01 SAM 2.1.1.57 GO:0003723 ... P07617 8612277
    58017 1vpw:A (2.7) BS01 dna ? GO:0000976 ... P0ACP7 9628480
    58018 1vpw:A (2.7) BS02 HPA ? GO:0000976 ... P0ACP7 9628480
    58019 1vpy:A (2.52) BS01 ZN ? N/A Q838R9 N/A
    58020 1vpy:A (2.52) BS02 ZN ? N/A Q838R9 N/A
    58021 1vq0:A (2.2) BS01 ZN ? GO:0005737 ... Q9X1B4 16167343
    58022 1vq0:B (2.2) BS01 ZN ? GO:0005737 ... Q9X1B4 16167343
    58023 1vq1:A (2.8) BS01 SAM 2.1.1.297 GO:0003676 ... Q9WYV8 N/A
    58024 1vq1:B (2.8) BS01 SAM 2.1.1.297 GO:0003676 ... Q9WYV8 N/A
    58025 1vq2:A (2.2) BS01 ZN 3.5.4.12 GO:0003824 ... P16006 15504034
    58026 1vq2:A (2.2) BS02 ZN 3.5.4.12 GO:0003824 ... P16006 15504034
    58027 1vq2:A (2.2) BS03 DDN 3.5.4.12 GO:0003824 ... P16006 15504034
    58028 1vq4:1 (2.7) BS01 rna ? GO:0003723 ... P32410 16285925
    58029 1vq4:2 (2.7) BS01 rna ? GO:0003735 ... P22452 16285925
    58030 1vq4:3 (2.7) BS01 rna ? GO:0003735 ... P32411 16285925
    58031 1vq4:3 (2.7) BS02 MG ? GO:0003735 ... P32411 16285925
    58032 1vq4:A (2.7) BS01 rna ? GO:0002181 ... P20276 16285925
    58033 1vq4:A (2.7) BS02 MG ? GO:0002181 ... P20276 16285925
    58034 1vq4:B (2.7) BS01 rna ? GO:0003723 ... P20279 16285925
    58035 1vq4:C (2.7) BS01 rna ? GO:0003735 ... P12735 16285925
    58036 1vq4:D (2.7) BS01 rna ? GO:0000049 ... P14124 16285925
    58037 1vq4:D (2.7) BS02 rna ? GO:0000049 ... P14124 16285925
    58038 1vq4:E (2.7) BS01 rna ? GO:0002181 ... P14135 16285925
    58039 1vq4:F (2.7) BS01 rna ? GO:0001682 ... P12743 16285925
    58040 1vq4:H (2.7) BS01 rna ? GO:0003735 ... P60617 16285925
    58041 1vq4:I (2.7) BS01 rna ? GO:0003735 ... P14122 16285925
    58042 1vq4:J (2.7) BS01 rna ? GO:0003729 ... P29198 16285925
    58043 1vq4:K (2.7) BS01 rna ? GO:0003735 ... P22450 16285925
    58044 1vq4:L (2.7) BS01 rna ? GO:0003735 ... P12737 16285925
    58045 1vq4:M (2.7) BS01 rna ? GO:0002181 ... P60618 16285925
    58046 1vq4:N (2.7) BS01 rna ? GO:0000027 ... P14123 16285925
    58047 1vq4:N (2.7) BS02 rna ? GO:0000027 ... P14123 16285925
    58048 1vq4:O (2.7) BS01 rna ? GO:0003723 ... P12733 16285925
    58049 1vq4:P (2.7) BS01 rna ? GO:0003723 ... P14119 16285925
    58050 1vq4:Q (2.7) BS01 rna ? GO:0003735 ... P12734 16285925
    58051 1vq4:Q (2.7) BS02 rna ? GO:0003735 ... P12734 16285925
    58052 1vq4:R (2.7) BS01 rna ? GO:0002181 ... P10970 16285925
    58053 1vq4:S (2.7) BS01 rna ? GO:0003735 ... P12732 16285925
    58054 1vq4:T (2.7) BS01 rna ? GO:0003723 ... P10972 16285925
    58055 1vq4:T (2.7) BS02 MG ? GO:0003723 ... P10972 16285925
    58056 1vq4:U (2.7) BS01 rna ? GO:0003735 ... P14116 16285925
    58057 1vq4:V (2.7) BS01 rna ? GO:0003735 ... P10971 16285925
    58058 1vq4:W (2.7) BS01 rna ? GO:0000463 ... P14121 16285925
    58059 1vq4:W (2.7) BS02 rna ? GO:0000463 ... P14121 16285925
    58060 1vq4:X (2.7) BS01 rna ? GO:0002181 ... P18138 16285925
    58061 1vq4:Y (2.7) BS01 rna ? GO:0000166 ... P12736 16285925
    58062 1vq4:Y (2.7) BS02 MG ? GO:0000166 ... P12736 16285925
    58063 1vq4:Z (2.7) BS01 rna ? GO:0003735 ... P60619 16285925
    58064 1vq5:1 (2.6) BS01 rna ? GO:0003723 ... P32410 16285925
    58065 1vq5:2 (2.6) BS01 rna ? GO:0003735 ... P22452 16285925
    58066 1vq5:3 (2.6) BS01 rna ? GO:0003735 ... P32411 16285925
    58067 1vq5:3 (2.6) BS02 MG ? GO:0003735 ... P32411 16285925
    58068 1vq5:A (2.6) BS01 rna ? GO:0002181 ... P20276 16285925
    58069 1vq5:A (2.6) BS02 MG ? GO:0002181 ... P20276 16285925
    58070 1vq5:B (2.6) BS01 rna ? GO:0003723 ... P20279 16285925
    58071 1vq5:C (2.6) BS01 rna ? GO:0003735 ... P12735 16285925
    58072 1vq5:D (2.6) BS01 rna ? GO:0000049 ... P14124 16285925
    58073 1vq5:D (2.6) BS02 rna ? GO:0000049 ... P14124 16285925
    58074 1vq5:E (2.6) BS01 rna ? GO:0002181 ... P14135 16285925
    58075 1vq5:F (2.6) BS01 rna ? GO:0001682 ... P12743 16285925
    58076 1vq5:H (2.6) BS01 rna ? GO:0003735 ... P60617 16285925
    58077 1vq5:I (2.6) BS01 rna ? GO:0003735 ... P14122 16285925
    58078 1vq5:J (2.6) BS01 rna ? GO:0003729 ... P29198 16285925
    58079 1vq5:K (2.6) BS01 rna ? GO:0003735 ... P22450 16285925
    58080 1vq5:L (2.6) BS01 rna ? GO:0003735 ... P12737 16285925
    58081 1vq5:M (2.6) BS01 rna ? GO:0002181 ... P60618 16285925
    58082 1vq5:N (2.6) BS01 rna ? GO:0000027 ... P14123 16285925
    58083 1vq5:N (2.6) BS02 rna ? GO:0000027 ... P14123 16285925
    58084 1vq5:O (2.6) BS01 rna ? GO:0003723 ... P12733 16285925
    58085 1vq5:P (2.6) BS01 rna ? GO:0003723 ... P14119 16285925
    58086 1vq5:Q (2.6) BS01 rna ? GO:0003735 ... P12734 16285925
    58087 1vq5:Q (2.6) BS02 rna ? GO:0003735 ... P12734 16285925
    58088 1vq5:R (2.6) BS01 rna ? GO:0002181 ... P10970 16285925
    58089 1vq5:S (2.6) BS01 rna ? GO:0003735 ... P12732 16285925
    58090 1vq5:T (2.6) BS01 rna ? GO:0003723 ... P10972 16285925
    58091 1vq5:T (2.6) BS02 MG ? GO:0003723 ... P10972 16285925
    58092 1vq5:U (2.6) BS01 rna ? GO:0003735 ... P14116 16285925
    58093 1vq5:V (2.6) BS01 rna ? GO:0003735 ... P10971 16285925
    58094 1vq5:W (2.6) BS01 rna ? GO:0000463 ... P14121 16285925
    58095 1vq5:W (2.6) BS02 rna ? GO:0000463 ... P14121 16285925
    58096 1vq5:X (2.6) BS01 rna ? GO:0002181 ... P18138 16285925
    58097 1vq5:Y (2.6) BS01 rna ? GO:0000166 ... P12736 16285925
    58098 1vq5:Y (2.6) BS02 MG ? GO:0000166 ... P12736 16285925
    58099 1vq5:Z (2.6) BS01 rna ? GO:0003735 ... P60619 16285925
    58100 1vq6:1 (2.7) BS01 rna ? GO:0003723 ... P32410 16306996
    58101 1vq6:2 (2.7) BS01 rna ? GO:0003735 ... P22452 16306996
    58102 1vq6:3 (2.7) BS01 rna ? GO:0003735 ... P32411 16306996
    58103 1vq6:3 (2.7) BS02 MG ? GO:0003735 ... P32411 16306996
    58104 1vq6:A (2.7) BS01 rna ? GO:0002181 ... P20276 16306996
    58105 1vq6:A (2.7) BS02 MG ? GO:0002181 ... P20276 16306996
    58106 1vq6:B (2.7) BS01 rna ? GO:0003723 ... P20279 16306996
    58107 1vq6:C (2.7) BS01 rna ? GO:0003735 ... P12735 16306996
    58108 1vq6:D (2.7) BS01 rna ? GO:0000049 ... P14124 16306996
    58109 1vq6:D (2.7) BS02 rna ? GO:0000049 ... P14124 16306996
    58110 1vq6:E (2.7) BS01 rna ? GO:0002181 ... P14135 16306996
    58111 1vq6:F (2.7) BS01 rna ? GO:0001682 ... P12743 16306996
    58112 1vq6:H (2.7) BS01 rna ? GO:0003735 ... P60617 16306996
    58113 1vq6:I (2.7) BS01 rna ? GO:0003735 ... P14122 16306996
    58114 1vq6:J (2.7) BS01 rna ? GO:0003729 ... P29198 16306996
    58115 1vq6:K (2.7) BS01 rna ? GO:0003735 ... P22450 16306996
    58116 1vq6:L (2.7) BS01 rna ? GO:0003735 ... P12737 16306996
    58117 1vq6:M (2.7) BS01 rna ? GO:0002181 ... P60618 16306996
    58118 1vq6:N (2.7) BS01 rna ? GO:0000027 ... P14123 16306996
    58119 1vq6:N (2.7) BS02 rna ? GO:0000027 ... P14123 16306996
    58120 1vq6:O (2.7) BS01 rna ? GO:0003723 ... P12733 16306996
    58121 1vq6:P (2.7) BS01 rna ? GO:0003723 ... P14119 16306996
    58122 1vq6:Q (2.7) BS01 rna ? GO:0003735 ... P12734 16306996
    58123 1vq6:Q (2.7) BS02 rna ? GO:0003735 ... P12734 16306996
    58124 1vq6:R (2.7) BS01 rna ? GO:0002181 ... P10970 16306996
    58125 1vq6:S (2.7) BS01 rna ? GO:0003735 ... P12732 16306996
    58126 1vq6:T (2.7) BS01 rna ? GO:0003723 ... P10972 16306996
    58127 1vq6:T (2.7) BS02 MG ? GO:0003723 ... P10972 16306996
    58128 1vq6:U (2.7) BS01 rna ? GO:0003735 ... P14116 16306996
    58129 1vq6:V (2.7) BS01 rna ? GO:0003735 ... P10971 16306996
    58130 1vq6:W (2.7) BS01 rna ? GO:0000463 ... P14121 16306996
    58131 1vq6:W (2.7) BS02 rna ? GO:0000463 ... P14121 16306996
    58132 1vq6:X (2.7) BS01 rna ? GO:0002181 ... P18138 16306996
    58133 1vq6:Y (2.7) BS01 rna ? GO:0000166 ... P12736 16306996
    58134 1vq6:Y (2.7) BS02 MG ? GO:0000166 ... P12736 16306996
    58135 1vq6:Z (2.7) BS01 rna ? GO:0003735 ... P60619 16306996
    58136 1vq7:1 (2.5) BS01 rna ? GO:0003723 ... P32410 16306996
    58137 1vq7:2 (2.5) BS01 rna ? GO:0003735 ... P22452 16306996
    58138 1vq7:3 (2.5) BS01 rna ? GO:0003735 ... P32411 16306996
    58139 1vq7:3 (2.5) BS02 MG ? GO:0003735 ... P32411 16306996
    58140 1vq7:A (2.5) BS01 rna ? GO:0002181 ... P20276 16306996
    58141 1vq7:B (2.5) BS01 rna ? GO:0003723 ... P20279 16306996
    58142 1vq7:C (2.5) BS01 rna ? GO:0003735 ... P12735 16306996
    58143 1vq7:D (2.5) BS01 rna ? GO:0000049 ... P14124 16306996
    58144 1vq7:D (2.5) BS02 rna ? GO:0000049 ... P14124 16306996
    58145 1vq7:E (2.5) BS01 rna ? GO:0002181 ... P14135 16306996
    58146 1vq7:F (2.5) BS01 rna ? GO:0001682 ... P12743 16306996
    58147 1vq7:H (2.5) BS01 rna ? GO:0003735 ... P60617 16306996
    58148 1vq7:I (2.5) BS01 rna ? GO:0003735 ... P14122 16306996
    58149 1vq7:J (2.5) BS01 rna ? GO:0003729 ... P29198 16306996
    58150 1vq7:K (2.5) BS01 rna ? GO:0003735 ... P22450 16306996
    58151 1vq7:L (2.5) BS01 rna ? GO:0003735 ... P12737 16306996
    58152 1vq7:M (2.5) BS01 rna ? GO:0002181 ... P60618 16306996
    58153 1vq7:N (2.5) BS01 rna ? GO:0000027 ... P14123 16306996
    58154 1vq7:N (2.5) BS02 rna ? GO:0000027 ... P14123 16306996
    58155 1vq7:O (2.5) BS01 rna ? GO:0003723 ... P12733 16306996
    58156 1vq7:P (2.5) BS01 rna ? GO:0003723 ... P14119 16306996
    58157 1vq7:Q (2.5) BS01 rna ? GO:0003735 ... P12734 16306996
    58158 1vq7:Q (2.5) BS02 rna ? GO:0003735 ... P12734 16306996
    58159 1vq7:R (2.5) BS01 rna ? GO:0002181 ... P10970 16306996
    58160 1vq7:S (2.5) BS01 rna ? GO:0003735 ... P12732 16306996
    58161 1vq7:T (2.5) BS01 rna ? GO:0003723 ... P10972 16306996
    58162 1vq7:T (2.5) BS02 MG ? GO:0003723 ... P10972 16306996
    58163 1vq7:U (2.5) BS01 rna ? GO:0003735 ... P14116 16306996
    58164 1vq7:V (2.5) BS01 rna ? GO:0003735 ... P10971 16306996
    58165 1vq7:W (2.5) BS01 rna ? GO:0000463 ... P14121 16306996
    58166 1vq7:W (2.5) BS02 rna ? GO:0000463 ... P14121 16306996
    58167 1vq7:X (2.5) BS01 rna ? GO:0002181 ... P18138 16306996
    58168 1vq7:Y (2.5) BS01 rna ? GO:0000166 ... P12736 16306996
    58169 1vq7:Y (2.5) BS02 MG ? GO:0000166 ... P12736 16306996
    58170 1vq7:Z (2.5) BS01 rna ? GO:0003735 ... P60619 16306996
    58171 1vq8:1 (2.2) BS01 rna ? GO:0003723 ... P32410 16285925
    58172 1vq8:2 (2.2) BS01 rna ? GO:0003735 ... P22452 16285925
    58173 1vq8:3 (2.2) BS01 rna ? GO:0003735 ... P32411 16285925
    58174 1vq8:A (2.2) BS01 rna ? GO:0002181 ... P20276 16285925
    58175 1vq8:A (2.2) BS02 MG ? GO:0002181 ... P20276 16285925
    58176 1vq8:B (2.2) BS01 rna ? GO:0003723 ... P20279 16285925
    58177 1vq8:C (2.2) BS01 rna ? GO:0003735 ... P12735 16285925
    58178 1vq8:D (2.2) BS01 rna ? GO:0000049 ... P14124 16285925
    58179 1vq8:D (2.2) BS02 rna ? GO:0000049 ... P14124 16285925
    58180 1vq8:E (2.2) BS01 rna ? GO:0002181 ... P14135 16285925
    58181 1vq8:F (2.2) BS01 rna ? GO:0001682 ... P12743 16285925
    58182 1vq8:H (2.2) BS01 rna ? GO:0003735 ... P60617 16285925
    58183 1vq8:I (2.2) BS01 rna ? GO:0003735 ... P14122 16285925
    58184 1vq8:J (2.2) BS01 rna ? GO:0003729 ... P29198 16285925
    58185 1vq8:K (2.2) BS01 rna ? GO:0003735 ... P22450 16285925
    58186 1vq8:L (2.2) BS01 rna ? GO:0003735 ... P12737 16285925
    58187 1vq8:M (2.2) BS01 rna ? GO:0002181 ... P60618 16285925
    58188 1vq8:N (2.2) BS01 rna ? GO:0000027 ... P14123 16285925
    58189 1vq8:N (2.2) BS02 rna ? GO:0000027 ... P14123 16285925
    58190 1vq8:O (2.2) BS01 rna ? GO:0003723 ... P12733 16285925
    58191 1vq8:P (2.2) BS01 rna ? GO:0003723 ... P14119 16285925
    58192 1vq8:Q (2.2) BS01 rna ? GO:0003735 ... P12734 16285925
    58193 1vq8:Q (2.2) BS02 rna ? GO:0003735 ... P12734 16285925
    58194 1vq8:R (2.2) BS01 rna ? GO:0002181 ... P10970 16285925
    58195 1vq8:S (2.2) BS01 rna ? GO:0003735 ... P12732 16285925
    58196 1vq8:T (2.2) BS01 rna ? GO:0003723 ... P10972 16285925
    58197 1vq8:T (2.2) BS02 MG ? GO:0003723 ... P10972 16285925
    58198 1vq8:U (2.2) BS01 rna ? GO:0003735 ... P14116 16285925
    58199 1vq8:V (2.2) BS01 rna ? GO:0003735 ... P10971 16285925
    58200 1vq8:W (2.2) BS01 rna ? GO:0000463 ... P14121 16285925

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).