SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    582001 6xql:A (1.97) BS01 GLC 3.2.1.39 GO:0004553 ... A0A0B5H9B3 33556371
    582002 6xql:A (1.97) BS02 BGC 3.2.1.39 GO:0004553 ... A0A0B5H9B3 33556371
    582003 6xql:A (1.97) BS03 CA 3.2.1.39 GO:0004553 ... A0A0B5H9B3 33556371
    582004 6xqm:A (1.85) BS01 GLC 3.2.1.39 GO:0004553 ... A0A0B5H9B3 33556371
    582005 6xqm:A (1.85) BS02 BGC 3.2.1.39 GO:0004553 ... A0A0B5H9B3 33556371
    582006 6xqm:A (1.85) BS03 GLC 3.2.1.39 GO:0004553 ... A0A0B5H9B3 33556371
    582007 6xqm:A (1.85) BS04 CA 3.2.1.39 GO:0004553 ... A0A0B5H9B3 33556371
    582008 6xqn:C (3.3) BS01 peptide ? GO:0051560 ... D6WIX5 32667285
    582009 6xqn:D (3.3) BS01 peptide ? GO:0051560 ... D6WIX5 32667285
    582010 6xqo:I (3.1) BS01 CA ? GO:0005509 ... Q9BPX6 32667285
    582011 6xqo:I (3.1) BS02 CA ? GO:0005509 ... Q9BPX6 32667285
    582012 6xqo:J (3.1) BS01 CA ? GO:0005509 ... Q8IYU8 32667285
    582013 6xqo:J (3.1) BS02 CA ? GO:0005509 ... Q8IYU8 32667285
    582014 6xqp:A (2.9) BS01 2LJ ? N/A Q95460 32817339
    582015 6xqp:C (2.9) BS01 2LJ ? N/A Q95460 32817339
    582016 6xqr:A (2.2) BS01 VBV 3.5.2.6 GO:0005886 ... Q6XEC0 34817169
    582017 6xqr:B (2.2) BS01 VBV 3.5.2.6 GO:0005886 ... Q6XEC0 34817169
    582018 6xqs:A (1.9) BS01 SV6 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 33152262
    582019 6xqt:A (2.3) BS01 NNA 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 33152262
    582020 6xqt:B (2.3) BS01 NNA 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 33152262
    582021 6xqu:A (2.2) BS01 U5G 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 33152262
    582022 6xqv:A (2.05) BS01 9F2 3.4.16.4 GO:0008658 ... P08149 34529975
    582023 6xqv:B (2.05) BS01 9F2 3.4.16.4 GO:0008658 ... P08149 34529975
    582024 6xqv:B (2.05) BS02 9F2 3.4.16.4 GO:0008658 ... P08149 34529975
    582025 6xr0:M (3.064) BS01 FE ? GO:0005576 ... P08582 N/A
    582026 6xr0:M (3.064) BS02 BCT ? GO:0005576 ... P08582 N/A
    582027 6xr3:A (1.45) BS01 V7G 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 N/A BindingDB: EC50=4200nM, Ki=18nM
    582028 6xr5:A (1.7) BS01 ADE 4.1.1.33 GO:0004163 ... J9VRT5 N/A
    582029 6xr5:B (1.7) BS01 ADE 4.1.1.33 GO:0004163 ... J9VRT5 N/A
    582030 6xr5:D (1.7) BS01 ADE 4.1.1.33 GO:0004163 ... J9VRT5 N/A
    582031 6xr5:E (1.7) BS01 ADE 4.1.1.33 GO:0004163 ... J9VRT5 N/A
    582032 6xr5:H (1.7) BS01 ADE 4.1.1.33 GO:0004163 ... J9VRT5 N/A
    582033 6xrc:A (2.45) BS01 ATP ? GO:0005524 ... Q9L069 32885650
    582034 6xrc:A (2.45) BS02 MG ? GO:0005524 ... Q9L069 32885650
    582035 6xrc:B (2.45) BS01 ATP ? GO:0005524 ... Q9L069 32885650
    582036 6xrc:B (2.45) BS02 MG ? GO:0005524 ... Q9L069 32885650
    582037 6xre:A (4.6) BS01 MG 2.7.7.48
    2.7.7.6
    3.1.13.-    		 GO:0000287 ... P24928 33767390
    582038 6xre:A (4.6) BS02 ZN 2.7.7.48
    2.7.7.6
    3.1.13.-    		 GO:0000287 ... P24928 33767390
    582039 6xre:A (4.6) BS03 ZN 2.7.7.48
    2.7.7.6
    3.1.13.-    		 GO:0000287 ... P24928 33767390
    582040 6xre:I (4.6) BS01 ZN ? GO:0000428 ... P36954 33767390
    582041 6xre:I (4.6) BS02 ZN ? GO:0000428 ... P36954 33767390
    582042 6xre:L (4.6) BS01 ZN ? GO:0000428 ... P53803 33767390
    582043 6xrh:A (1.44) BS01 1GP 4.2.1.20 GO:0000162 ... P00929 33428374
    582044 6xrh:B (1.44) BS01 VCP 4.2.1.20 GO:0000162 ... P0A2K1 33428374
    582045 6xrh:B (1.44) BS02 VCS 4.2.1.20 GO:0000162 ... P0A2K1 33428374
    582046 6xrh:B (1.44) BS03 NA 4.2.1.20 GO:0000162 ... P0A2K1 33428374
    582047 6xrl:A (2.99) BS01 V7Y 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 32865410 BindingDB: IC50=2000nM, Kd=0.290000nM
    582048 6xrm:A (2.88) BS01 V81 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 32865410
    582049 6xrn:A (2.96) BS01 V84 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 34672584
    582050 6xro:A (2.3) BS01 peptide 3.4.21.105 GO:0004252 ... P09391 32888502
    582051 6xro:A (2.3) BS02 B2A 3.4.21.105 GO:0004252 ... P09391 32888502
    582052 6xrp:A (2.4) BS01 peptide 3.4.21.105 GO:0004252 ... P09391 32888502
    582053 6xrp:A (2.4) BS02 V87 3.4.21.105 GO:0004252 ... P09391 32888502
    582054 6xrs:A (2.8) BS01 GDP ? GO:0005525 ... B4RKD2 N/A
    582055 6xrs:B (2.8) BS01 GDP ? GO:0005525 ... B4RKD2 N/A
    582056 6xrs:B (2.8) BS02 GDP ? GO:0005525 ... B4RKD2 N/A
    582057 6xrs:C (2.8) BS01 GDP ? GO:0005525 ... B4RKD2 N/A
    582058 6xrs:C (2.8) BS02 GDP ? GO:0005525 ... B4RKD2 N/A
    582059 6xrs:D (2.8) BS01 GDP ? GO:0005525 ... B4RKD2 N/A
    582060 6xrs:D (2.8) BS02 GDP ? GO:0005525 ... B4RKD2 N/A
    582061 6xrt:H (3.9) BS01 MAN N/A N/A N/A 33214287
    582062 6xrt:H (3.9) BS02 BMA N/A N/A N/A 33214287
    582063 6xru:A (1.4) BS01 DCA 6.2.1.4
    6.2.1.5    		 GO:0003824 ... O19069 N/A
    582064 6xrv:A (1.43) BS01 OCA 3.1.1.3 GO:0006629 ... O59952 N/A
    582065 6xrv:A (1.43) BS02 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    582066 6xrv:A (1.43) BS03 OCA 3.1.1.3 GO:0006629 ... O59952 N/A
    582067 6xrv:B (1.43) BS01 OCA 3.1.1.3 GO:0006629 ... O59952 N/A
    582068 6xrv:B (1.43) BS02 CA 3.1.1.3 GO:0006629 ... O59952 N/A
    582069 6xrv:B (1.43) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    582070 6xrv:C (1.43) BS01 OCA 3.1.1.3 GO:0006629 ... O59952 N/A
    582071 6xrv:C (1.43) BS02 CA 3.1.1.3 GO:0006629 ... O59952 N/A
    582072 6xrv:C (1.43) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    582073 6xrv:D (1.43) BS01 OCA 3.1.1.3 GO:0006629 ... O59952 N/A
    582074 6xrv:D (1.43) BS02 CA 3.1.1.3 GO:0006629 ... O59952 N/A
    582075 6xrv:D (1.43) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    582076 6xrv:E (1.43) BS01 OCA 3.1.1.3 GO:0006629 ... O59952 N/A
    582077 6xrv:E (1.43) BS02 CA 3.1.1.3 GO:0006629 ... O59952 N/A
    582078 6xrv:E (1.43) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    582079 6xrv:F (1.43) BS01 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    582080 6xrv:F (1.43) BS02 OCA 3.1.1.3 GO:0006629 ... O59952 N/A
    582081 6xrv:F (1.43) BS03 CA 3.1.1.3 GO:0006629 ... O59952 N/A
    582082 6xrv:F (1.43) BS04 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    582083 6xrx:A (1.95) BS01 GLC ? GO:0005515 ... P0AEX9
    Q8T5C5    		 33688047
    582084 6xrx:A (1.95) BS02 GLC ? GO:0005515 ... P0AEX9
    Q8T5C5    		 33688047
    582085 6xs3:A (2.48) BS01 OCA 3.1.1.3 GO:0006629 ... O59952 N/A
    582086 6xs3:A (2.48) BS02 CA 3.1.1.3 GO:0006629 ... O59952 N/A
    582087 6xs3:A (2.48) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    582088 6xs3:B (2.48) BS01 OCA 3.1.1.3 GO:0006629 ... O59952 N/A
    582089 6xs3:B (2.48) BS02 CA 3.1.1.3 GO:0006629 ... O59952 N/A
    582090 6xs3:B (2.48) BS03 CA 3.1.1.3 GO:0006629 ... O59952 N/A
    582091 6xs3:B (2.48) BS04 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    582092 6xs3:C (2.48) BS01 OCA 3.1.1.3 GO:0006629 ... O59952 N/A
    582093 6xs3:C (2.48) BS02 CA 3.1.1.3 GO:0006629 ... O59952 N/A
    582094 6xs3:C (2.48) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    582095 6xs3:D (2.48) BS01 OCA 3.1.1.3 GO:0006629 ... O59952 N/A
    582096 6xs3:D (2.48) BS02 CA 3.1.1.3 GO:0006629 ... O59952 N/A
    582097 6xs3:D (2.48) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    582098 6xs3:E (2.48) BS01 OCA 3.1.1.3 GO:0006629 ... O59952 N/A
    582099 6xs3:E (2.48) BS02 CA 3.1.1.3 GO:0006629 ... O59952 N/A
    582100 6xs3:E (2.48) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    582101 6xs3:F (2.48) BS01 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    582102 6xs3:F (2.48) BS02 OCA 3.1.1.3 GO:0006629 ... O59952 N/A
    582103 6xs3:F (2.48) BS03 CA 3.1.1.3 GO:0006629 ... O59952 N/A
    582104 6xs3:F (2.48) BS04 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    582105 6xs5:A (2.01) BS01 peptide ? GO:0005515 ... Q9UBQ0 34851660
    582106 6xs7:A (1.58) BS01 peptide ? GO:0005515 ... Q9UBQ0 34851660
    582107 6xs8:A (1.9501) BS01 peptide ? GO:0005829 ... G0RZB5 34851660
    582108 6xs9:A (2.69) BS01 peptide ? GO:0005515 ... Q9UBQ0 34851660
    582109 6xs9:A (2.69) BS02 peptide ? GO:0005515 ... Q9UBQ0 34851660
    582110 6xs9:A (2.69) BS03 peptide ? GO:0005515 ... Q9UBQ0 34851660
    582111 6xs9:B (2.69) BS01 peptide ? GO:0005515 ... Q9UBQ0 34851660
    582112 6xs9:B (2.69) BS02 peptide ? GO:0005515 ... Q9UBQ0 34851660
    582113 6xsa:A (1.83) BS01 peptide ? GO:0005515 ... Q9UBQ0 34851660
    582114 6xsb:A (1.95) BS01 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    582115 6xsb:A (1.95) BS02 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    582116 6xsc:A (2.0) BS01 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    582117 6xsc:A (2.0) BS02 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    582118 6xse:A (2.1) BS01 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    582119 6xse:A (2.1) BS02 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    582120 6xsf:A (1.6) BS01 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    582121 6xsg:A (2.0) BS01 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    582122 6xsg:A (2.0) BS02 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    582123 6xsh:A (2.0) BS01 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    582124 6xsh:A (2.0) BS02 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    582125 6xsi:A (2.0) BS01 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    582126 6xsi:A (2.0) BS02 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    582127 6xsj:A (1.4) BS01 CA 3.2.1.1 GO:0004556 ... P0C1B3 33814275
    582128 6xsj:B (1.4) BS01 CA 3.2.1.1 GO:0004556 ... P0C1B3 33814275
    582129 6xsj:B (1.4) BS02 ALA 3.2.1.1 GO:0004556 ... P0C1B3 33814275
    582130 6xsp:A (2.3) BS01 VCY ? GO:0003756 ... P0AEG4 34364222
    582131 6xsp:B (2.3) BS01 CU ? GO:0003756 ... P0AEG4 34364222
    582132 6xsq:A (2.3) BS01 VE7 ? GO:0003756 ... P0AEG4 34364222
    582133 6xsq:B (2.3) BS01 VE7 ? GO:0003756 ... P0AEG4 34364222
    582134 6xsq:B (2.3) BS02 CU ? GO:0003756 ... P0AEG4 34364222
    582135 6xsr:A (4.25) BS01 V8G ? GO:0000149 ... P19491 32959886
    582136 6xsr:B (4.25) BS01 V8G ? GO:0000149 ... P19491 32959886
    582137 6xsr:C (4.25) BS01 V8G ? GO:0000149 ... P19491 32959886
    582138 6xsr:D (4.25) BS01 V8G ? GO:0000149 ... P19491 32959886
    582139 6xsv:A (1.65) BS01 MAN 3.2.1.1 GO:0004556 ... P0C1B3 33814275
    582140 6xsv:A (1.65) BS02 MAN 3.2.1.1 GO:0004556 ... P0C1B3 33814275
    582141 6xsv:A (1.65) BS03 CA 3.2.1.1 GO:0004556 ... P0C1B3 33814275
    582142 6xsw:C (2.98) BS01 CA ? GO:0007219 ... Q9UM47 34095881
    582143 6xsw:C (2.98) BS02 CA ? GO:0007219 ... Q9UM47 34095881
    582144 6xsw:C (2.98) BS03 CA ? GO:0007219 ... Q9UM47 34095881
    582145 6xsw:F (2.98) BS01 CA ? GO:0007219 ... Q9UM47 34095881
    582146 6xsw:F (2.98) BS02 CA ? GO:0007219 ... Q9UM47 34095881
    582147 6xsw:F (2.98) BS03 CA ? GO:0007219 ... Q9UM47 34095881
    582148 6xsw:J (2.98) BS01 CA ? GO:0007219 ... Q9UM47 34095881
    582149 6xsw:J (2.98) BS02 CA ? GO:0007219 ... Q9UM47 34095881
    582150 6xsw:J (2.98) BS03 CA ? GO:0007219 ... Q9UM47 34095881
    582151 6xsw:X (2.98) BS01 CA ? GO:0007219 ... Q9UM47 34095881
    582152 6xsw:X (2.98) BS02 CA ? GO:0007219 ... Q9UM47 34095881
    582153 6xsw:X (2.98) BS03 CA ? GO:0007219 ... Q9UM47 34095881
    582154 6xsw:X (2.98) BS04 CA ? GO:0007219 ... Q9UM47 34095881
    582155 6xsy:A (1.55) BS01 F9F 4.2.1.20 GO:0000162 ... P00929 N/A
    582156 6xsy:B (1.55) BS01 KOU 4.2.1.20 GO:0000162 ... P0A2K1 N/A
    582157 6xsz:A (2.25) BS01 ZN ? N/A F8UNJ8 N/A
    582158 6xsz:B (2.25) BS01 ZN ? N/A F8UNJ8 N/A
    582159 6xsz:C (2.25) BS01 ZN ? N/A F8UNJ8 N/A
    582160 6xsz:D (2.25) BS01 ZN ? N/A F8UNJ8 N/A
    582161 6xt0:A (1.37) BS01 1GP 4.2.1.20 GO:0000162 ... P00929 33428374
    582162 6xt0:B (1.37) BS01 X9D 4.2.1.20 GO:0000162 ... P0A2K1 33428374
    582163 6xt0:B (1.37) BS02 VE4 4.2.1.20 GO:0000162 ... P0A2K1 33428374
    582164 6xt0:B (1.37) BS03 NA 4.2.1.20 GO:0000162 ... P0A2K1 33428374
    582165 6xt1:A (2.49) BS01 SIA ? N/A F8UNJ8 N/A
    582166 6xt1:A (2.49) BS02 ZN ? N/A F8UNJ8 N/A
    582167 6xt1:A (2.49) BS03 SER ? N/A F8UNJ8 N/A
    582168 6xt1:B (2.49) BS01 SIA ? N/A F8UNJ8 N/A
    582169 6xt1:B (2.49) BS02 ZN ? N/A F8UNJ8 N/A
    582170 6xt1:B (2.49) BS03 SER ? N/A F8UNJ8 N/A
    582171 6xt1:C (2.49) BS01 ZN ? N/A F8UNJ8 N/A
    582172 6xt1:D (2.49) BS01 ZN ? N/A F8UNJ8 N/A
    582173 6xt2:A (1.55) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 33675814
    582174 6xt2:A (1.55) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 33675814
    582175 6xt2:A (1.55) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 33675814
    582176 6xt2:A (1.55) BS04 B7F 1.1.1.1 GO:0004022 ... P00327 33675814
    582177 6xt2:B (1.55) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 33675814
    582178 6xt2:B (1.55) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 33675814
    582179 6xt2:B (1.55) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 33675814
    582180 6xt2:B (1.55) BS04 B7F 1.1.1.1 GO:0004022 ... P00327 33675814
    582181 6xt2:C (1.55) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 33675814
    582182 6xt2:C (1.55) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 33675814
    582183 6xt2:C (1.55) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 33675814
    582184 6xt2:C (1.55) BS04 B7F 1.1.1.1 GO:0004022 ... P00327 33675814
    582185 6xt2:D (1.55) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 33675814
    582186 6xt2:D (1.55) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 33675814
    582187 6xt2:D (1.55) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 33675814
    582188 6xt2:D (1.55) BS04 B7F 1.1.1.1 GO:0004022 ... P00327 33675814
    582189 6xt3:A (1.99) BS01 VED ? GO:0003756 ... P0AEG4 34364222
    582190 6xt3:B (1.99) BS01 VED ? GO:0003756 ... P0AEG4 34364222
    582191 6xt3:B (1.99) BS02 CU ? GO:0003756 ... P0AEG4 34364222
    582192 6xt6:A (2.103) BS01 MN ? GO:0005537 ... P02866 34235541
    582193 6xt6:A (2.103) BS02 CA ? GO:0005537 ... P02866 34235541
    582194 6xt6:A (2.103) BS03 ZN ? GO:0005537 ... P02866 34235541
    582195 6xt6:A (2.103) BS04 CA ? GO:0005537 ... P02866 34235541
    582196 6xt6:B (2.103) BS01 MN ? GO:0005537 ... P02866 34235541
    582197 6xt6:B (2.103) BS02 CA ? GO:0005537 ... P02866 34235541
    582198 6xt6:B (2.103) BS03 ZN ? GO:0005537 ... P02866 34235541
    582199 6xta:A (2.5) BS01 O0Z 3.1.1.8 GO:0001540 ... P06276 32919297 MOAD: ic50=2.8nM
    582200 6xte:A (2.27) BS01 peptide ? GO:0002753 ... O00410 32222384
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).