SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    582801 6xvh:A (1.8) BS02 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    582802 6xvj:A (1.78) BS01 O35 2.7.10.1 GO:0004672 ... P35968 32412754
    582803 6xvk:A (1.99) BS01 O3E 2.7.10.1 GO:0004672 ... P35968 32412754 MOAD: ic50=0.538uM
    582804 6xvp:A (2.65) BS01 ZN 3.4.24.11 GO:0001786 ... P08473 32337993
    582805 6xvp:A (2.65) BS02 D0Z 3.4.24.11 GO:0001786 ... P08473 32337993 BindingDB: IC50=8.0nM
    582806 6xvt:A (1.4) BS01 peptide ? N/A Q8N8S7 33184177
    582807 6xvt:B (1.4) BS01 peptide ? N/A Q8N8S7 33184177
    582808 6xvu:A (2.1) BS01 CA ? GO:0000160 ... Q9RZA5 34285211
    582809 6xvu:A (2.1) BS02 CA ? GO:0000160 ... Q9RZA5 34285211
    582810 6xvu:A (2.1) BS03 CA ? GO:0000160 ... Q9RZA5 34285211
    582811 6xvu:B (2.1) BS01 CA ? GO:0000160 ... Q9RZA5 34285211
    582812 6xvu:B (2.1) BS02 CA ? GO:0000160 ... Q9RZA5 34285211
    582813 6xvu:C (2.1) BS01 CA ? GO:0000160 ... Q9RZA5 34285211
    582814 6xvu:C (2.1) BS02 CA ? GO:0000160 ... Q9RZA5 34285211
    582815 6xvu:C (2.1) BS03 CA ? GO:0000160 ... Q9RZA5 34285211
    582816 6xvu:D (2.1) BS01 CA ? GO:0000160 ... Q9RZA5 34285211
    582817 6xvu:D (2.1) BS02 CA ? GO:0000160 ... Q9RZA5 34285211
    582818 6xvw:A (2.0) BS01 O3H 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 32435397 BindingDB: IC50=9.3nM
    582819 6xvw:B (2.0) BS01 O3H 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 32435397 BindingDB: IC50=9.3nM
    582820 6xw0:AAA (1.8) BS01 ACT 4.6.1.18 GO:0003676 ... P61823 32022076
    582821 6xw0:AAA (1.8) BS02 ACT 4.6.1.18 GO:0003676 ... P61823 32022076
    582822 6xw0:BBB (1.8) BS01 ACT 4.6.1.18 GO:0003676 ... P61823 32022076
    582823 6xw2:A (1.75) BS01 CA N/A GO:0005509 ... N/A 32121243
    582824 6xw2:A (1.75) BS02 CA N/A GO:0005509 ... N/A 32121243
    582825 6xw2:A (1.75) BS03 CA N/A GO:0005509 ... N/A 32121243
    582826 6xw2:A (1.75) BS04 CA N/A GO:0005509 ... N/A 32121243
    582827 6xw6:A (1.96) BS01 MG ? N/A Q80J94 32321816
    582828 6xw6:A (1.96) BS02 MG ? N/A Q80J94 32321816
    582829 6xw6:B (1.96) BS01 MG ? N/A Q80J94 32321816
    582830 6xw7:A (2.15) BS01 CHO ? N/A Q80J94 32321816
    582831 6xw7:A (2.15) BS02 CHO ? N/A Q80J94 32321816
    582832 6xw7:B (2.15) BS01 CHO ? N/A Q80J94 32321816
    582833 6xw7:B (2.15) BS02 CHO ? N/A Q80J94 32321816
    582834 6xw7:B (2.15) BS03 MG ? N/A Q80J94 32321816
    582835 6xw7:E (2.15) BS01 CHO ? N/A Q80J94 32321816
    582836 6xw7:E (2.15) BS02 CHO ? N/A Q80J94 32321816
    582837 6xw7:F (2.15) BS01 CHO ? N/A Q80J94 32321816
    582838 6xw7:F (2.15) BS02 CHO ? N/A Q80J94 32321816
    582839 6xwb:A (2.2) BS01 PLP N/A GO:0003824 ... N/A 32793563
    582840 6xwb:B (2.2) BS01 PLP N/A GO:0003824 ... N/A 32793563
    582841 6xwd:A (1.6) BS01 peptide ? GO:0000122 ... P31947 33109610
    582842 6xwd:A (1.6) BS02 CA ? GO:0000122 ... P31947 33109610
    582843 6xwd:A (1.6) BS03 MG ? GO:0000122 ... P31947 33109610
    582844 6xwg:C (2.4) BS01 dna ? GO:0003700 ... P19793 32974652
    582845 6xwg:C (2.4) BS02 dna ? GO:0003700 ... P19793 32974652
    582846 6xwg:C (2.4) BS03 ZN ? GO:0003700 ... P19793 32974652
    582847 6xwg:C (2.4) BS04 ZN ? GO:0003700 ... P19793 32974652
    582848 6xwg:D (2.4) BS01 dna ? GO:0003700 ... P10276 32974652
    582849 6xwg:D (2.4) BS02 dna ? GO:0003700 ... P10276 32974652
    582850 6xwg:D (2.4) BS03 ZN ? GO:0003700 ... P10276 32974652
    582851 6xwg:D (2.4) BS04 ZN ? GO:0003700 ... P10276 32974652
    582852 6xwh:C (2.1) BS01 dna ? GO:0003700 ... P19793 32974652
    582853 6xwh:C (2.1) BS02 dna ? GO:0003700 ... P19793 32974652
    582854 6xwh:C (2.1) BS03 ZN ? GO:0003700 ... P19793 32974652
    582855 6xwh:C (2.1) BS04 ZN ? GO:0003700 ... P19793 32974652
    582856 6xwh:D (2.1) BS01 dna ? GO:0003700 ... P19793 32974652
    582857 6xwh:D (2.1) BS02 dna ? GO:0003700 ... P19793 32974652
    582858 6xwh:D (2.1) BS03 ZN ? GO:0003700 ... P19793 32974652
    582859 6xwh:D (2.1) BS04 ZN ? GO:0003700 ... P19793 32974652
    582860 6xwk:AAA (1.17) BS01 CYC N/A GO:0015979 ... N/A 32303893
    582861 6xwk:BBB (1.17) BS01 CYC N/A GO:0015979 ... N/A 32303893
    582862 6xwk:BBB (1.17) BS02 CYC N/A GO:0015979 ... N/A 32303893
    582863 6xwl:A (3.201) BS01 PLP 4.2.1.22 GO:0004122 ... A0A125YSJ9 34194677
    582864 6xwl:B (3.201) BS01 PLP 4.2.1.22 GO:0004122 ... A0A125YSJ9 34194677
    582865 6xwl:C (3.201) BS01 PLP 4.2.1.22 GO:0004122 ... A0A125YSJ9 34194677
    582866 6xwl:D (3.201) BS01 PLP 4.2.1.22 GO:0004122 ... A0A125YSJ9 34194677
    582867 6xwl:E (3.201) BS01 PLP 4.2.1.22 GO:0004122 ... A0A125YSJ9 34194677
    582868 6xwl:F (3.201) BS01 PLP 4.2.1.22 GO:0004122 ... A0A125YSJ9 34194677
    582869 6xwm:A (2.6) BS01 PHE ? GO:0005886 ... O67854 32081981
    582870 6xwm:A (2.6) BS02 NA ? GO:0005886 ... O67854 32081981
    582871 6xwm:A (2.6) BS03 NA ? GO:0005886 ... O67854 32081981
    582872 6xwm:B (2.6) BS01 PHE ? GO:0005886 ... O67854 32081981
    582873 6xwm:B (2.6) BS02 NA ? GO:0005886 ... O67854 32081981
    582874 6xwm:B (2.6) BS03 NA ? GO:0005886 ... O67854 32081981
    582875 6xwn:B (3.47) BS01 TB1 ? GO:0005886 ... Q5JID0 32081874
    582876 6xwn:C (3.47) BS01 TB1 ? GO:0005886 ... Q5JID0 32081874
    582877 6xwo:C (3.39) BS01 ASP ? GO:0005886 ... Q5JID0 32081874
    582878 6xwp:B (3.38) BS01 ASP ? GO:0005886 ... Q5JID0 32081874
    582879 6xwp:C (3.38) BS01 ASP ? GO:0005886 ... Q5JID0 32081874
    582880 6xwq:A (3.41) BS01 ASP ? GO:0005886 ... Q5JID0 32081874
    582881 6xwq:B (3.41) BS01 ASP ? GO:0005886 ... Q5JID0 32081874
    582882 6xwq:C (3.41) BS01 ASP ? GO:0005886 ... Q5JID0 32081874
    582883 6xwv:A (2.27) BS01 peptide ? GO:0000775 ... Q9VHP9 32134144
    582884 6xwv:C (2.27) BS01 peptide ? GO:0000775 ... Q9VHP9 32134144
    582885 6xwz:AAA (1.38) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    582886 6xwz:AAA (1.38) BS02 GXE 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    582887 6xx2:A (1.25) BS01 CU 2.7.10.2 N/A P00523 32279137
    582888 6xx3:A (1.36) BS01 CU 2.7.10.2 N/A P00523 32279137
    582889 6xx6:A (1.8492) BS01 PIV 2.7.11.1 GO:0004672 ... Q08467 32254052
    582890 6xx7:A (2.4) BS01 ANP 2.7.11.1 GO:0004672 ... Q08467 32254052
    582891 6xx7:A (2.4) BS02 MG 2.7.11.1 GO:0004672 ... Q08467 32254052
    582892 6xxc:A (1.3) BS01 peptide ? GO:0000122 ... P31947 33196173
    582893 6xxc:A (1.3) BS02 MG ? GO:0000122 ... P31947 33196173
    582894 6xxc:A (1.3) BS03 O3W ? GO:0000122 ... P31947 33196173
    582895 6xxf:AAA (1.7) BS01 peptide ? GO:0000086 ... P0DP24 34888671
    582896 6xxf:AAA (1.7) BS02 CA ? GO:0000086 ... P0DP24 34888671
    582897 6xxf:AAA (1.7) BS03 CA ? GO:0000086 ... P0DP24 34888671
    582898 6xxf:AAA (1.7) BS04 CA ? GO:0000086 ... P0DP24 34888671
    582899 6xxf:AAA (1.7) BS05 CA ? GO:0000086 ... P0DP24 34888671
    582900 6xxg:AAA (2.099) BS01 MG 2.2.1.7 GO:0008661 ... Q9RUB5 33421767
    582901 6xxg:AAA (2.099) BS02 CA 2.2.1.7 GO:0008661 ... Q9RUB5 33421767
    582902 6xxg:AAA (2.099) BS03 TPP 2.2.1.7 GO:0008661 ... Q9RUB5 33421767
    582903 6xxg:AAA (2.099) BS04 CA 2.2.1.7 GO:0008661 ... Q9RUB5 33421767
    582904 6xxg:AAA (2.099) BS05 MG 2.2.1.7 GO:0008661 ... Q9RUB5 33421767
    582905 6xxg:BBB (2.099) BS01 MG 2.2.1.7 GO:0008661 ... Q9RUB5 33421767
    582906 6xxg:BBB (2.099) BS02 CA 2.2.1.7 GO:0008661 ... Q9RUB5 33421767
    582907 6xxg:BBB (2.099) BS03 MG 2.2.1.7 GO:0008661 ... Q9RUB5 33421767
    582908 6xxg:BBB (2.099) BS04 MG 2.2.1.7 GO:0008661 ... Q9RUB5 33421767
    582909 6xxg:BBB (2.099) BS05 TPP 2.2.1.7 GO:0008661 ... Q9RUB5 33421767
    582910 6xxg:BBB (2.099) BS06 CA 2.2.1.7 GO:0008661 ... Q9RUB5 33421767
    582911 6xxg:BBB (2.099) BS07 CA 2.2.1.7 GO:0008661 ... Q9RUB5 33421767
    582912 6xxi:A (1.679) BS01 NAD 2.5.1.46 GO:0005515 ... P49366 32235505
    582913 6xxi:A (1.679) BS02 NAD 2.5.1.46 GO:0005515 ... P49366 32235505
    582914 6xxi:B (1.679) BS01 NAD 2.5.1.46 GO:0005515 ... P49366 32235505
    582915 6xxi:B (1.679) BS02 NAD 2.5.1.46 GO:0005515 ... P49366 32235505
    582916 6xxj:A (1.41) BS01 SPD 2.5.1.46 GO:0005515 ... P49366 32235505
    582917 6xxj:A (1.41) BS02 NAD 2.5.1.46 GO:0005515 ... P49366 32235505
    582918 6xxj:A (1.41) BS03 SPD 2.5.1.46 GO:0005515 ... P49366 32235505
    582919 6xxj:A (1.41) BS04 NAD 2.5.1.46 GO:0005515 ... P49366 32235505
    582920 6xxj:B (1.41) BS01 SPD 2.5.1.46 GO:0005515 ... P49366 32235505
    582921 6xxj:B (1.41) BS02 NAD 2.5.1.46 GO:0005515 ... P49366 32235505
    582922 6xxj:B (1.41) BS03 SPD 2.5.1.46 GO:0005515 ... P49366 32235505
    582923 6xxj:B (1.41) BS04 NAD 2.5.1.46 GO:0005515 ... P49366 32235505
    582924 6xxk:A (1.65) BS01 SPD 2.5.1.46 GO:0005515 ... P49366 32235505 MOAD: Kd=4uM
    582925 6xxk:A (1.65) BS02 SPD 2.5.1.46 GO:0005515 ... P49366 32235505 MOAD: Kd=4uM
    582926 6xxk:B (1.65) BS01 SPD 2.5.1.46 GO:0005515 ... P49366 32235505 MOAD: Kd=4uM
    582927 6xxk:B (1.65) BS02 SPD 2.5.1.46 GO:0005515 ... P49366 32235505 MOAD: Kd=4uM
    582928 6xxl:A (1.69) BS01 SPM 2.5.1.46 GO:0005515 ... P49366 32235505
    582929 6xxl:A (1.69) BS02 SPM 2.5.1.46 GO:0005515 ... P49366 32235505
    582930 6xxl:B (1.69) BS01 SPM 2.5.1.46 GO:0005515 ... P49366 32235505
    582931 6xxl:B (1.69) BS02 SPM 2.5.1.46 GO:0005515 ... P49366 32235505
    582932 6xxm:A (1.67) BS01 PUT 2.5.1.46 GO:0005515 ... P49366 32235505
    582933 6xxm:A (1.67) BS02 PUT 2.5.1.46 GO:0005515 ... P49366 32235505
    582934 6xxm:B (1.67) BS01 PUT 2.5.1.46 GO:0005515 ... P49366 32235505
    582935 6xxq:A (3.0) BS01 MG 2.7.7.47 GO:0005524 ... Q07448 32253216
    582936 6xxq:A (3.0) BS02 ATP 2.7.7.47 GO:0005524 ... Q07448 32253216
    582937 6xxq:A (3.0) BS03 SCM 2.7.7.47 GO:0005524 ... Q07448 32253216
    582938 6xxq:B (3.0) BS01 MG 2.7.7.47 GO:0005524 ... Q07448 32253216
    582939 6xxq:B (3.0) BS02 ATP 2.7.7.47 GO:0005524 ... Q07448 32253216
    582940 6xxq:B (3.0) BS03 SCM 2.7.7.47 GO:0005524 ... Q07448 32253216
    582941 6xxr:A (1.48) BS01 peptide ? N/A Q8N8S7 33184177
    582942 6xxr:B (1.48) BS01 peptide ? N/A Q8N8S7 33184177
    582943 6xxs:A (3.25) BS01 peptide ? N/A P41182 33708392
    582944 6xxs:A (3.25) BS02 peptide ? N/A P41182 33708392
    582945 6xxs:B (3.25) BS01 peptide ? N/A P41182 33708392
    582946 6xxs:B (3.25) BS02 peptide ? N/A P41182 33708392
    582947 6xxs:E (3.25) BS01 peptide ? N/A P41182 33708392
    582948 6xxs:E (3.25) BS02 peptide ? N/A P41182 33708392
    582949 6xxs:F (3.25) BS01 peptide ? N/A P41182 33708392
    582950 6xxs:F (3.25) BS02 peptide ? N/A P41182 33708392
    582951 6xxs:F (3.25) BS03 peptide ? N/A P41182 33708392
    582952 6xxt:X (1.05) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32435417
    582953 6xxt:X (1.05) BS02 O42 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32435417 MOAD: Ki=3.7nM
    BindingDB: Ki=3.7nM
    582954 6xxx:AAA (1.25) BS01 peptide ? GO:0000086 ... P0DP23 34888671
    582955 6xxx:AAA (1.25) BS02 CA ? GO:0000086 ... P0DP23 34888671
    582956 6xxx:AAA (1.25) BS03 CA ? GO:0000086 ... P0DP23 34888671
    582957 6xxx:AAA (1.25) BS04 CA ? GO:0000086 ... P0DP23 34888671
    582958 6xxx:AAA (1.25) BS05 CA ? GO:0000086 ... P0DP23 34888671
    582959 6xxy:A (2.09) BS01 NAD 1.1.1.85 GO:0000287 ... P43860 32059844
    582960 6xxy:A (2.09) BS02 MG 1.1.1.85 GO:0000287 ... P43860 32059844
    582961 6xxy:A (2.09) BS03 O45 1.1.1.85 GO:0000287 ... P43860 32059844 MOAD: ic50=2.9uM
    582962 6xxy:A (2.09) BS04 NAD 1.1.1.85 GO:0000287 ... P43860 32059844
    582963 6xxy:A (2.09) BS05 O45 1.1.1.85 GO:0000287 ... P43860 32059844 MOAD: ic50=2.9uM
    582964 6xxy:B (2.09) BS01 NAD 1.1.1.85 GO:0000287 ... P43860 32059844
    582965 6xxy:B (2.09) BS02 MG 1.1.1.85 GO:0000287 ... P43860 32059844
    582966 6xxy:B (2.09) BS03 O45 1.1.1.85 GO:0000287 ... P43860 32059844 MOAD: ic50=2.9uM
    582967 6xxy:B (2.09) BS04 NAD 1.1.1.85 GO:0000287 ... P43860 32059844
    582968 6xxy:B (2.09) BS05 O45 1.1.1.85 GO:0000287 ... P43860 32059844 MOAD: ic50=2.9uM
    582969 6xy3:AAA (2.0) BS01 peptide ? GO:0000086 ... P0DP23 34888671
    582970 6xy3:AAA (2.0) BS02 CA ? GO:0000086 ... P0DP23 34888671
    582971 6xy3:AAA (2.0) BS03 CA ? GO:0000086 ... P0DP23 34888671
    582972 6xy3:AAA (2.0) BS04 CA ? GO:0000086 ... P0DP23 34888671
    582973 6xy3:AAA (2.0) BS05 CA ? GO:0000086 ... P0DP23 34888671
    582974 6xy4:A (2.04623) BS01 peptide ? GO:0033668 ... A0A3F2YKH3 32390192
    582975 6xy5:A (1.3) BS01 peptide ? GO:0000122 ... P31947 33196173
    582976 6xy5:A (1.3) BS02 MG ? GO:0000122 ... P31947 33196173
    582977 6xy5:A (1.3) BS03 O4E ? GO:0000122 ... P31947 33196173
    582978 6xy6:A (2.91415) BS01 peptide ? GO:0033668 ... A0A3F2YKH3 32390192
    582979 6xy6:A (2.91415) BS02 peptide ? GO:0033668 ... A0A3F2YKH3 32390192
    582980 6xy6:C (2.91415) BS01 peptide ? GO:0033668 ... A0A3F2YKH3 32390192
    582981 6xy6:E (2.91415) BS01 peptide ? GO:0033668 ... A0A3F2YKH3 32390192
    582982 6xy6:G (2.91415) BS01 peptide ? GO:0033668 ... A0A3F2YKH3 32390192
    582983 6xy6:I (2.91415) BS01 peptide ? GO:0033668 ... A0A3F2YKH3 32390192
    582984 6xy6:K (2.91415) BS01 peptide ? GO:0033668 ... A0A3F2YKH3 32390192
    582985 6xy6:M (2.91415) BS01 peptide ? GO:0033668 ... A0A3F2YKH3 32390192
    582986 6xy6:O (2.91415) BS01 peptide ? GO:0033668 ... A0A3F2YKH3 32390192
    582987 6xy7:AAA (1.086) BS01 PO4 3.1.3.36
    3.1.3.56
    3.1.3.86
    GO:0016791 ... Q92835 38309262
    582988 6xya:B (1.35) BS01 MGP 2.7.7.48
    3.1.-.-
    N/A I0DF35 32313945 MOAD: Kd=138uM
    582989 6xyc:A (1.85) BS01 AES N/A N/A N/A 34059129
    582990 6xyg:A (1.5) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    582991 6xyk:A (1.5) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    582992 6xyl:A (3.151) BS01 P1T 4.2.1.22 GO:0004122 ... A0A125YSJ9 34194677
    582993 6xyl:B (3.151) BS01 P1T 4.2.1.22 GO:0004122 ... A0A125YSJ9 34194677
    582994 6xyl:C (3.151) BS01 P1T 4.2.1.22 GO:0004122 ... A0A125YSJ9 34194677
    582995 6xyl:D (3.151) BS01 P1T 4.2.1.22 GO:0004122 ... A0A125YSJ9 34194677
    582996 6xyl:E (3.151) BS01 P1T 4.2.1.22 GO:0004122 ... A0A125YSJ9 34194677
    582997 6xyl:F (3.151) BS01 P1T 4.2.1.22 GO:0004122 ... A0A125YSJ9 34194677
    582998 6xyr:A (2.079) BS01 CA 3.2.1.17 GO:0000086 ... P00720
    P0DP23
    34587504
    582999 6xyr:A (2.079) BS02 CA 3.2.1.17 GO:0000086 ... P00720
    P0DP23
    34587504
    583000 6xyr:A (2.079) BS03 CA 3.2.1.17 GO:0000086 ... P00720
    P0DP23
    34587504

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).