SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    58201 1vq8:W (2.2) BS02 rna ? GO:0000463 ... P14121 16285925
    58202 1vq8:X (2.2) BS01 rna ? GO:0002181 ... P18138 16285925
    58203 1vq8:Y (2.2) BS01 rna ? GO:0000166 ... P12736 16285925
    58204 1vq8:Y (2.2) BS02 MG ? GO:0000166 ... P12736 16285925
    58205 1vq8:Z (2.2) BS01 rna ? GO:0003735 ... P60619 16285925
    58206 1vq9:1 (2.4) BS01 rna ? GO:0003723 ... P32410 16285925
    58207 1vq9:2 (2.4) BS01 rna ? GO:0003735 ... P22452 16285925
    58208 1vq9:3 (2.4) BS01 rna ? GO:0003735 ... P32411 16285925
    58209 1vq9:A (2.4) BS01 rna ? GO:0002181 ... P20276 16285925
    58210 1vq9:A (2.4) BS02 MG ? GO:0002181 ... P20276 16285925
    58211 1vq9:B (2.4) BS01 rna ? GO:0003723 ... P20279 16285925
    58212 1vq9:C (2.4) BS01 rna ? GO:0003735 ... P12735 16285925
    58213 1vq9:D (2.4) BS01 rna ? GO:0000049 ... P14124 16285925
    58214 1vq9:D (2.4) BS02 rna ? GO:0000049 ... P14124 16285925
    58215 1vq9:E (2.4) BS01 rna ? GO:0002181 ... P14135 16285925
    58216 1vq9:F (2.4) BS01 rna ? GO:0001682 ... P12743 16285925
    58217 1vq9:H (2.4) BS01 rna ? GO:0003735 ... P60617 16285925
    58218 1vq9:H (2.4) BS02 rna ? GO:0003735 ... P60617 16285925
    58219 1vq9:I (2.4) BS01 rna ? GO:0003735 ... P14122 16285925
    58220 1vq9:J (2.4) BS01 rna ? GO:0003729 ... P29198 16285925
    58221 1vq9:K (2.4) BS01 rna ? GO:0003735 ... P22450 16285925
    58222 1vq9:L (2.4) BS01 rna ? GO:0003735 ... P12737 16285925
    58223 1vq9:M (2.4) BS01 rna ? GO:0002181 ... P60618 16285925
    58224 1vq9:N (2.4) BS01 rna ? GO:0000027 ... P14123 16285925
    58225 1vq9:N (2.4) BS02 rna ? GO:0000027 ... P14123 16285925
    58226 1vq9:O (2.4) BS01 rna ? GO:0003723 ... P12733 16285925
    58227 1vq9:P (2.4) BS01 rna ? GO:0003723 ... P14119 16285925
    58228 1vq9:Q (2.4) BS01 rna ? GO:0003735 ... P12734 16285925
    58229 1vq9:Q (2.4) BS02 rna ? GO:0003735 ... P12734 16285925
    58230 1vq9:R (2.4) BS01 rna ? GO:0002181 ... P10970 16285925
    58231 1vq9:S (2.4) BS01 rna ? GO:0003735 ... P12732 16285925
    58232 1vq9:T (2.4) BS01 rna ? GO:0003723 ... P10972 16285925
    58233 1vq9:T (2.4) BS02 MG ? GO:0003723 ... P10972 16285925
    58234 1vq9:U (2.4) BS01 rna ? GO:0003735 ... P14116 16285925
    58235 1vq9:V (2.4) BS01 rna ? GO:0003735 ... P10971 16285925
    58236 1vq9:W (2.4) BS01 rna ? GO:0000463 ... P14121 16285925
    58237 1vq9:W (2.4) BS02 rna ? GO:0000463 ... P14121 16285925
    58238 1vq9:X (2.4) BS01 rna ? GO:0002181 ... P18138 16285925
    58239 1vq9:Y (2.4) BS01 rna ? GO:0000166 ... P12736 16285925
    58240 1vq9:Y (2.4) BS02 MG ? GO:0000166 ... P12736 16285925
    58241 1vq9:Z (2.4) BS01 rna ? GO:0003735 ... P60619 16285925
    58242 1vqk:1 (2.3) BS01 rna ? GO:0003723 ... P32410 16285925
    58243 1vqk:2 (2.3) BS01 rna ? GO:0003735 ... P22452 16285925
    58244 1vqk:3 (2.3) BS01 rna ? GO:0003735 ... P32411 16285925
    58245 1vqk:A (2.3) BS01 rna ? GO:0002181 ... P20276 16285925
    58246 1vqk:A (2.3) BS02 MG ? GO:0002181 ... P20276 16285925
    58247 1vqk:A (2.3) BS03 MG ? GO:0002181 ... P20276 16285925
    58248 1vqk:B (2.3) BS01 rna ? GO:0003723 ... P20279 16285925
    58249 1vqk:C (2.3) BS01 rna ? GO:0003735 ... P12735 16285925
    58250 1vqk:D (2.3) BS01 rna ? GO:0000049 ... P14124 16285925
    58251 1vqk:D (2.3) BS02 rna ? GO:0000049 ... P14124 16285925
    58252 1vqk:E (2.3) BS01 rna ? GO:0002181 ... P14135 16285925
    58253 1vqk:F (2.3) BS01 rna ? GO:0001682 ... P12743 16285925
    58254 1vqk:H (2.3) BS01 rna ? GO:0003735 ... P60617 16285925
    58255 1vqk:I (2.3) BS01 rna ? GO:0003735 ... P14122 16285925
    58256 1vqk:J (2.3) BS01 rna ? GO:0003729 ... P29198 16285925
    58257 1vqk:K (2.3) BS01 rna ? GO:0003735 ... P22450 16285925
    58258 1vqk:L (2.3) BS01 rna ? GO:0003735 ... P12737 16285925
    58259 1vqk:M (2.3) BS01 rna ? GO:0002181 ... P60618 16285925
    58260 1vqk:N (2.3) BS01 rna ? GO:0000027 ... P14123 16285925
    58261 1vqk:N (2.3) BS02 rna ? GO:0000027 ... P14123 16285925
    58262 1vqk:O (2.3) BS01 rna ? GO:0003723 ... P12733 16285925
    58263 1vqk:P (2.3) BS01 rna ? GO:0003723 ... P14119 16285925
    58264 1vqk:Q (2.3) BS01 rna ? GO:0003735 ... P12734 16285925
    58265 1vqk:Q (2.3) BS02 rna ? GO:0003735 ... P12734 16285925
    58266 1vqk:R (2.3) BS01 rna ? GO:0002181 ... P10970 16285925
    58267 1vqk:S (2.3) BS01 rna ? GO:0003735 ... P12732 16285925
    58268 1vqk:T (2.3) BS01 rna ? GO:0003723 ... P10972 16285925
    58269 1vqk:T (2.3) BS02 MG ? GO:0003723 ... P10972 16285925
    58270 1vqk:U (2.3) BS01 rna ? GO:0003735 ... P14116 16285925
    58271 1vqk:V (2.3) BS01 rna ? GO:0003735 ... P10971 16285925
    58272 1vqk:W (2.3) BS01 rna ? GO:0000463 ... P14121 16285925
    58273 1vqk:W (2.3) BS02 rna ? GO:0000463 ... P14121 16285925
    58274 1vqk:X (2.3) BS01 rna ? GO:0002181 ... P18138 16285925
    58275 1vqk:Y (2.3) BS01 rna ? GO:0000166 ... P12736 16285925
    58276 1vqk:Y (2.3) BS02 MG ? GO:0000166 ... P12736 16285925
    58277 1vqk:Z (2.3) BS01 rna ? GO:0003735 ... P60619 16285925
    58278 1vql:1 (2.3) BS01 rna ? GO:0003723 ... P32410 16285925
    58279 1vql:2 (2.3) BS01 rna ? GO:0003735 ... P22452 16285925
    58280 1vql:3 (2.3) BS01 rna ? GO:0003735 ... P32411 16285925
    58281 1vql:A (2.3) BS01 rna ? GO:0002181 ... P20276 16285925
    58282 1vql:A (2.3) BS02 MG ? GO:0002181 ... P20276 16285925
    58283 1vql:A (2.3) BS03 MG ? GO:0002181 ... P20276 16285925
    58284 1vql:B (2.3) BS01 rna ? GO:0003723 ... P20279 16285925
    58285 1vql:C (2.3) BS01 rna ? GO:0003735 ... P12735 16285925
    58286 1vql:D (2.3) BS01 rna ? GO:0000049 ... P14124 16285925
    58287 1vql:D (2.3) BS02 rna ? GO:0000049 ... P14124 16285925
    58288 1vql:E (2.3) BS01 rna ? GO:0002181 ... P14135 16285925
    58289 1vql:F (2.3) BS01 rna ? GO:0001682 ... P12743 16285925
    58290 1vql:H (2.3) BS01 rna ? GO:0003735 ... P60617 16285925
    58291 1vql:I (2.3) BS01 rna ? GO:0003735 ... P14122 16285925
    58292 1vql:J (2.3) BS01 rna ? GO:0003729 ... P29198 16285925
    58293 1vql:K (2.3) BS01 rna ? GO:0003735 ... P22450 16285925
    58294 1vql:L (2.3) BS01 rna ? GO:0003735 ... P12737 16285925
    58295 1vql:M (2.3) BS01 rna ? GO:0002181 ... P60618 16285925
    58296 1vql:N (2.3) BS01 rna ? GO:0000027 ... P14123 16285925
    58297 1vql:N (2.3) BS02 rna ? GO:0000027 ... P14123 16285925
    58298 1vql:O (2.3) BS01 rna ? GO:0003723 ... P12733 16285925
    58299 1vql:P (2.3) BS01 rna ? GO:0003723 ... P14119 16285925
    58300 1vql:Q (2.3) BS01 rna ? GO:0003735 ... P12734 16285925
    58301 1vql:Q (2.3) BS02 rna ? GO:0003735 ... P12734 16285925
    58302 1vql:R (2.3) BS01 rna ? GO:0002181 ... P10970 16285925
    58303 1vql:S (2.3) BS01 rna ? GO:0003735 ... P12732 16285925
    58304 1vql:T (2.3) BS01 rna ? GO:0003723 ... P10972 16285925
    58305 1vql:T (2.3) BS02 MG ? GO:0003723 ... P10972 16285925
    58306 1vql:U (2.3) BS01 rna ? GO:0003735 ... P14116 16285925
    58307 1vql:V (2.3) BS01 rna ? GO:0003735 ... P10971 16285925
    58308 1vql:W (2.3) BS01 rna ? GO:0000463 ... P14121 16285925
    58309 1vql:W (2.3) BS02 rna ? GO:0000463 ... P14121 16285925
    58310 1vql:X (2.3) BS01 rna ? GO:0002181 ... P18138 16285925
    58311 1vql:Y (2.3) BS01 rna ? GO:0000166 ... P12736 16285925
    58312 1vql:Y (2.3) BS02 MG ? GO:0000166 ... P12736 16285925
    58313 1vql:Z (2.3) BS01 rna ? GO:0003735 ... P60619 16285925
    58314 1vqm:1 (2.3) BS01 rna ? GO:0003723 ... P32410 16285925
    58315 1vqm:2 (2.3) BS01 rna ? GO:0003735 ... P22452 16285925
    58316 1vqm:3 (2.3) BS01 rna ? GO:0003735 ... P32411 16285925
    58317 1vqm:A (2.3) BS01 rna ? GO:0002181 ... P20276 16285925
    58318 1vqm:A (2.3) BS02 MG ? GO:0002181 ... P20276 16285925
    58319 1vqm:A (2.3) BS03 MG ? GO:0002181 ... P20276 16285925
    58320 1vqm:B (2.3) BS01 rna ? GO:0003723 ... P20279 16285925
    58321 1vqm:C (2.3) BS01 rna ? GO:0003735 ... P12735 16285925
    58322 1vqm:D (2.3) BS01 rna ? GO:0000049 ... P14124 16285925
    58323 1vqm:D (2.3) BS02 rna ? GO:0000049 ... P14124 16285925
    58324 1vqm:E (2.3) BS01 rna ? GO:0002181 ... P14135 16285925
    58325 1vqm:F (2.3) BS01 rna ? GO:0001682 ... P12743 16285925
    58326 1vqm:H (2.3) BS01 rna ? GO:0003735 ... P60617 16285925
    58327 1vqm:I (2.3) BS01 rna ? GO:0003735 ... P14122 16285925
    58328 1vqm:J (2.3) BS01 rna ? GO:0003729 ... P29198 16285925
    58329 1vqm:K (2.3) BS01 rna ? GO:0003735 ... P22450 16285925
    58330 1vqm:L (2.3) BS01 rna ? GO:0003735 ... P12737 16285925
    58331 1vqm:M (2.3) BS01 rna ? GO:0002181 ... P60618 16285925
    58332 1vqm:N (2.3) BS01 rna ? GO:0000027 ... P14123 16285925
    58333 1vqm:N (2.3) BS02 rna ? GO:0000027 ... P14123 16285925
    58334 1vqm:O (2.3) BS01 rna ? GO:0003723 ... P12733 16285925
    58335 1vqm:P (2.3) BS01 rna ? GO:0003723 ... P14119 16285925
    58336 1vqm:Q (2.3) BS01 rna ? GO:0003735 ... P12734 16285925
    58337 1vqm:Q (2.3) BS02 rna ? GO:0003735 ... P12734 16285925
    58338 1vqm:R (2.3) BS01 rna ? GO:0002181 ... P10970 16285925
    58339 1vqm:S (2.3) BS01 rna ? GO:0003735 ... P12732 16285925
    58340 1vqm:T (2.3) BS01 rna ? GO:0003723 ... P10972 16285925
    58341 1vqm:T (2.3) BS02 MG ? GO:0003723 ... P10972 16285925
    58342 1vqm:U (2.3) BS01 rna ? GO:0003735 ... P14116 16285925
    58343 1vqm:V (2.3) BS01 rna ? GO:0003735 ... P10971 16285925
    58344 1vqm:W (2.3) BS01 rna ? GO:0000463 ... P14121 16285925
    58345 1vqm:W (2.3) BS02 rna ? GO:0000463 ... P14121 16285925
    58346 1vqm:X (2.3) BS01 rna ? GO:0002181 ... P18138 16285925
    58347 1vqm:Y (2.3) BS01 rna ? GO:0000166 ... P12736 16285925
    58348 1vqm:Y (2.3) BS02 MG ? GO:0000166 ... P12736 16285925
    58349 1vqm:Z (2.3) BS01 rna ? GO:0003735 ... P60619 16285925
    58350 1vqn:1 (2.4) BS01 rna ? GO:0003723 ... P32410 16306996
    58351 1vqn:2 (2.4) BS01 rna ? GO:0003735 ... P22452 16306996
    58352 1vqn:3 (2.4) BS01 rna ? GO:0003735 ... P32411 16306996
    58353 1vqn:A (2.4) BS01 rna ? GO:0002181 ... P20276 16306996
    58354 1vqn:A (2.4) BS02 MG ? GO:0002181 ... P20276 16306996
    58355 1vqn:A (2.4) BS03 MG ? GO:0002181 ... P20276 16306996
    58356 1vqn:B (2.4) BS01 rna ? GO:0003723 ... P20279 16306996
    58357 1vqn:C (2.4) BS01 rna ? GO:0003735 ... P12735 16306996
    58358 1vqn:D (2.4) BS01 rna ? GO:0000049 ... P14124 16306996
    58359 1vqn:D (2.4) BS02 rna ? GO:0000049 ... P14124 16306996
    58360 1vqn:E (2.4) BS01 rna ? GO:0002181 ... P14135 16306996
    58361 1vqn:F (2.4) BS01 rna ? GO:0001682 ... P12743 16306996
    58362 1vqn:H (2.4) BS01 rna ? GO:0003735 ... P60617 16306996
    58363 1vqn:I (2.4) BS01 rna ? GO:0003735 ... P14122 16306996
    58364 1vqn:J (2.4) BS01 rna ? GO:0003729 ... P29198 16306996
    58365 1vqn:K (2.4) BS01 rna ? GO:0003735 ... P22450 16306996
    58366 1vqn:L (2.4) BS01 rna ? GO:0003735 ... P12737 16306996
    58367 1vqn:M (2.4) BS01 rna ? GO:0002181 ... P60618 16306996
    58368 1vqn:N (2.4) BS01 rna ? GO:0000027 ... P14123 16306996
    58369 1vqn:N (2.4) BS02 rna ? GO:0000027 ... P14123 16306996
    58370 1vqn:O (2.4) BS01 rna ? GO:0003723 ... P12733 16306996
    58371 1vqn:P (2.4) BS01 rna ? GO:0003723 ... P14119 16306996
    58372 1vqn:Q (2.4) BS01 rna ? GO:0003735 ... P12734 16306996
    58373 1vqn:Q (2.4) BS02 rna ? GO:0003735 ... P12734 16306996
    58374 1vqn:R (2.4) BS01 rna ? GO:0002181 ... P10970 16306996
    58375 1vqn:S (2.4) BS01 rna ? GO:0003735 ... P12732 16306996
    58376 1vqn:T (2.4) BS01 rna ? GO:0003723 ... P10972 16306996
    58377 1vqn:T (2.4) BS02 MG ? GO:0003723 ... P10972 16306996
    58378 1vqn:U (2.4) BS01 rna ? GO:0003735 ... P14116 16306996
    58379 1vqn:V (2.4) BS01 rna ? GO:0003735 ... P10971 16306996
    58380 1vqn:W (2.4) BS01 rna ? GO:0000463 ... P14121 16306996
    58381 1vqn:W (2.4) BS02 rna ? GO:0000463 ... P14121 16306996
    58382 1vqn:X (2.4) BS01 rna ? GO:0002181 ... P18138 16306996
    58383 1vqn:Y (2.4) BS01 rna ? GO:0000166 ... P12736 16306996
    58384 1vqn:Y (2.4) BS02 MG ? GO:0000166 ... P12736 16306996
    58385 1vqn:Z (2.4) BS01 rna ? GO:0003735 ... P60619 16306996
    58386 1vqo:1 (2.2) BS01 rna ? GO:0003723 ... P32410 16285925
    58387 1vqo:2 (2.2) BS01 rna ? GO:0003735 ... P22452 16285925
    58388 1vqo:3 (2.2) BS01 rna ? GO:0003735 ... P32411 16285925
    58389 1vqo:A (2.2) BS01 rna ? GO:0002181 ... P20276 16285925
    58390 1vqo:A (2.2) BS02 MG ? GO:0002181 ... P20276 16285925
    58391 1vqo:A (2.2) BS03 MG ? GO:0002181 ... P20276 16285925
    58392 1vqo:B (2.2) BS01 rna ? GO:0003723 ... P20279 16285925
    58393 1vqo:C (2.2) BS01 rna ? GO:0003735 ... P12735 16285925
    58394 1vqo:D (2.2) BS01 rna ? GO:0000049 ... P14124 16285925
    58395 1vqo:D (2.2) BS02 rna ? GO:0000049 ... P14124 16285925
    58396 1vqo:E (2.2) BS01 rna ? GO:0002181 ... P14135 16285925
    58397 1vqo:F (2.2) BS01 rna ? GO:0001682 ... P12743 16285925
    58398 1vqo:H (2.2) BS01 rna ? GO:0003735 ... P60617 16285925
    58399 1vqo:I (2.2) BS01 rna ? GO:0003735 ... P14122 16285925
    58400 1vqo:J (2.2) BS01 rna ? GO:0003729 ... P29198 16285925

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).