SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2910 2911 2912 2913 2914 2915 2916 2917 2918 2919 2920 2921 2922 2923 2924 2925 2926 2927 2928 2929 2930 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    583801 6y36:B (2.3) BS02 dna ? GO:0001228 ... A0A229Y8Y1 32467317
    583802 6y36:C (2.3) BS01 dna ? GO:0003677 ... Q4WDM9 32467317
    583803 6y36:C (2.3) BS02 dna ? GO:0003677 ... Q4WDM9 32467317
    583804 6y37:A (2.2) BS01 dna ? GO:0003700 ... G5EAZ0 32467317
    583805 6y37:A (2.2) BS02 dna ? GO:0003700 ... G5EAZ0 32467317
    583806 6y37:B (2.2) BS01 dna ? GO:0001228 ... Q5B5Z6 32467317
    583807 6y37:B (2.2) BS02 dna ? GO:0001228 ... Q5B5Z6 32467317
    583808 6y37:C (2.2) BS01 dna N/A GO:0003677 ... N/A 32467317
    583809 6y37:C (2.2) BS02 dna N/A GO:0003677 ... N/A 32467317
    583810 6y38:A (1.697) BS01 peptide ? N/A Q80VW5 32971111
    583811 6y38:A (1.697) BS02 peptide ? N/A Q80VW5 32971111
    583812 6y38:B (1.697) BS01 peptide ? N/A Q80VW5 32971111
    583813 6y38:B (1.697) BS02 peptide ? N/A Q80VW5 32971111
    583814 6y39:B (2.3) BS01 peptide ? GO:0001228 ... Q5B5Z6 32467317
    583815 6y39:B (2.3) BS02 dna ? GO:0001228 ... Q5B5Z6 32467317
    583816 6y39:B (2.3) BS03 dna ? GO:0001228 ... Q5B5Z6 32467317
    583817 6y39:C (2.3) BS01 peptide N/A GO:0003677 ... N/A 32467317
    583818 6y39:E (2.3) BS01 peptide ? GO:0001228 ... Q5B5Z6 32467317
    583819 6y39:E (2.3) BS02 dna ? GO:0001228 ... Q5B5Z6 32467317
    583820 6y39:E (2.3) BS03 dna ? GO:0001228 ... Q5B5Z6 32467317
    583821 6y39:F (2.3) BS01 peptide N/A GO:0003677 ... N/A 32467317
    583822 6y39:F (2.3) BS02 dna N/A GO:0003677 ... N/A 32467317
    583823 6y39:H (2.3) BS01 dna ? GO:0001228 ... Q5B5Z6 32467317
    583824 6y39:I (2.3) BS01 dna N/A GO:0003677 ... N/A 32467317
    583825 6y3b:A (1.59) BS01 O7N 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004252 ... Q32ZE1 32501637
    583826 6y3b:B (1.59) BS01 O7N 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q32ZE1 32501637
    583827 6y3j:A (2.6) BS01 APR 2.3.2.27 GO:0007219 ... Q86UW9 32937373
    583828 6y3j:A (2.6) BS02 ZN 2.3.2.27 GO:0007219 ... Q86UW9 32937373
    583829 6y3j:A (2.6) BS03 ZN 2.3.2.27 GO:0007219 ... Q86UW9 32937373
    583830 6y3m:A (1.5) BS01 peptide ? GO:0000122 ... P31947 33006579
    583831 6y3m:A (1.5) BS02 MG ? GO:0000122 ... P31947 33006579
    583832 6y3o:A (1.5) BS01 peptide ? GO:0000122 ... P31947 33006579
    583833 6y3o:A (1.5) BS02 MG ? GO:0000122 ... P31947 33006579
    583834 6y3o:A (1.5) BS03 MG ? GO:0000122 ... P31947 33006579
    583835 6y3q:AAA (1.95) BS01 O7Q ? GO:0005576 ... P22629 32450689
    583836 6y3r:A (1.5) BS01 peptide ? GO:0000122 ... P31947 33006579
    583837 6y3r:A (1.5) BS02 MG ? GO:0000122 ... P31947 33006579
    583838 6y3s:A (1.95) BS01 peptide ? GO:0000122 ... P31947 33006579
    583839 6y3s:A (1.95) BS02 MG ? GO:0000122 ... P31947 33006579
    583840 6y3u:A (2.62) BS01 MLQ ? GO:0003677 ... P37231 32267688
    583841 6y3v:A (1.499) BS01 peptide ? GO:0000122 ... P31947 33006579
    583842 6y3v:A (1.499) BS02 MG ? GO:0000122 ... P31947 33006579
    583843 6y3w:A (1.34) BS01 peptide ? GO:0000122 ... P31947 33196173
    583844 6y3w:A (1.34) BS02 MG ? GO:0000122 ... P31947 33196173
    583845 6y3w:A (1.34) BS03 O85 ? GO:0000122 ... P31947 33196173
    583846 6y3z:A (3.49) BS01 peptide 3.6.1.62 GO:0000184 ... P53550 32396195
    583847 6y3z:P (3.49) BS01 MG 6.3.2.25 GO:0005524 ... P38254 32396195
    583848 6y40:A (1.75) BS01 peptide ? GO:0000122 ... P31947 33006579
    583849 6y41:A (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583850 6y41:B (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583851 6y41:C (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583852 6y41:D (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583853 6y41:E (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583854 6y41:F (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583855 6y41:G (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583856 6y41:H (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583857 6y41:I (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583858 6y41:J (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583859 6y41:K (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583860 6y41:L (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583861 6y41:M (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583862 6y41:N (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583863 6y41:O (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583864 6y41:P (1.79) BS01 CA ? GO:0007596 ... Q9UKU9 N/A
    583865 6y42:A (4.3) BS01 dna ? GO:0003700 ... F2RGC9 32078310
    583866 6y42:A (4.3) BS02 dna ? GO:0003700 ... F2RGC9 32078310
    583867 6y42:A (4.3) BS03 FES ? GO:0003700 ... F2RGC9 32078310
    583868 6y42:A (4.3) BS04 FES ? GO:0003700 ... F2RGC9 32078310
    583869 6y42:B (4.3) BS01 dna ? GO:0003700 ... F2RGC9 32078310
    583870 6y42:B (4.3) BS02 dna ? GO:0003700 ... F2RGC9 32078310
    583871 6y42:B (4.3) BS03 FES ? GO:0003700 ... F2RGC9 32078310
    583872 6y42:B (4.3) BS04 FES ? GO:0003700 ... F2RGC9 32078310
    583873 6y43:A (1.6) BS01 CA ? GO:0007596 ... Q8NI99 N/A
    583874 6y44:A (1.71) BS01 peptide ? GO:0000122 ... P31947 33006579
    583875 6y44:A (1.71) BS02 MG ? GO:0000122 ... P31947 33006579
    583876 6y45:A (1.68) BS01 FES ? GO:0003700 ... F2RGC9 32078310
    583877 6y45:A (1.68) BS02 FES ? GO:0003700 ... F2RGC9 32078310
    583878 6y45:B (1.68) BS01 FES ? GO:0003700 ... F2RGC9 32078310
    583879 6y45:B (1.68) BS02 FES ? GO:0003700 ... F2RGC9 32078310
    583880 6y45:C (1.68) BS01 FES ? GO:0003700 ... F2RGC9 32078310
    583881 6y45:C (1.68) BS02 FES ? GO:0003700 ... F2RGC9 32078310
    583882 6y45:D (1.68) BS01 FES ? GO:0003700 ... F2RGC9 32078310
    583883 6y45:D (1.68) BS02 FES ? GO:0003700 ... F2RGC9 32078310
    583884 6y47:A (3.04) BS01 OWT ? GO:0006826 ... Q05098 35881068
    583885 6y48:A (2.087) BS01 FAD ? GO:0000166 ... A0A7G5K3Z4 N/A
    583886 6y48:A (2.087) BS02 NAP ? GO:0000166 ... A0A7G5K3Z4 N/A
    583887 6y48:B (2.087) BS01 FAD ? GO:0000166 ... A0A7G5K3Z4 N/A
    583888 6y48:B (2.087) BS02 NAP ? GO:0000166 ... A0A7G5K3Z4 N/A
    583889 6y48:C (2.087) BS01 FAD ? GO:0000166 ... A0A7G5K3Z4 N/A
    583890 6y48:C (2.087) BS02 NAP ? GO:0000166 ... A0A7G5K3Z4 N/A
    583891 6y48:D (2.087) BS01 FAD ? GO:0000166 ... A0A7G5K3Z4 N/A
    583892 6y48:D (2.087) BS02 NAP ? GO:0000166 ... A0A7G5K3Z4 N/A
    583893 6y4a:AAA (1.785) BS01 CU ? GO:0005507 ... B5HSR1 39541228
    583894 6y4a:AAA (1.785) BS02 CU ? GO:0005507 ... B5HSR1 39541228
    583895 6y4a:AAA (1.785) BS03 CU ? GO:0005507 ... B5HSR1 39541228
    583896 6y4a:BBB (1.785) BS01 CU ? GO:0005507 ... B5HSR1 39541228
    583897 6y4a:BBB (1.785) BS02 CU ? GO:0005507 ... B5HSR1 39541228
    583898 6y4a:BBB (1.785) BS03 CU ? GO:0005507 ... B5HSR1 39541228
    583899 6y4a:CCC (1.785) BS01 CU ? GO:0005507 ... B5HSR1 39541228
    583900 6y4a:CCC (1.785) BS02 CU ? GO:0005507 ... B5HSR1 39541228
    583901 6y4a:CCC (1.785) BS03 CU ? GO:0005507 ... B5HSR1 39541228
    583902 6y4b:A (5.0) BS01 rna ? GO:0016755 ... G2JBB2 32680846
    583903 6y4b:A (5.0) BS02 PHE ? GO:0016755 ... G2JBB2 32680846
    583904 6y4c:A (1.7) BS01 BGC ? GO:0030246 ... P17931 32876583
    583905 6y4c:A (1.7) BS02 GAL ? GO:0030246 ... P17931 32876583
    583906 6y4d:A (2.1) BS01 NAP N/A GO:0016491 ... N/A 32315494
    583907 6y4d:B (2.1) BS01 NAP N/A GO:0016491 ... N/A 32315494
    583908 6y4e:A (1.02) BS01 ZN ? N/A B4EUK6 32780778
    583909 6y4f:A (1.75) BS01 ZN ? N/A B4EUK6 32780778
    583910 6y4f:A (1.75) BS02 GLU ? N/A B4EUK6 32780778
    583911 6y4g:A (1.9) BS01 SFG 2.1.1.348 GO:0000398 ... Q86U44 32159918
    583912 6y4i:E (1.16) BS01 CA 3.4.24.27 GO:0004222 ... P43133 N/A
    583913 6y4i:E (1.16) BS02 CA 3.4.24.27 GO:0004222 ... P43133 N/A
    583914 6y4i:E (1.16) BS03 CA 3.4.24.27 GO:0004222 ... P43133 N/A
    583915 6y4i:E (1.16) BS04 CA 3.4.24.27 GO:0004222 ... P43133 N/A
    583916 6y4i:E (1.16) BS05 ZN 3.4.24.27 GO:0004222 ... P43133 N/A
    583917 6y4i:E (1.16) BS06 0PK 3.4.24.27 GO:0004222 ... P43133 N/A
    583918 6y4j:A (1.38) BS01 FAD N/A GO:0016491 ... N/A 32797625
    583919 6y4k:A (3.0) BS01 peptide ? GO:0002842 ... P61981 33146997
    583920 6y4k:A (3.0) BS02 FSC ? GO:0002842 ... P61981 33146997
    583921 6y4k:B (3.0) BS01 peptide ? GO:0002842 ... P61981 33146997
    583922 6y4m:A (3.34) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 33544599
    583923 6y4m:A (3.34) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 33544599
    583924 6y4m:B (3.34) BS01 GDP ? GO:0000226 ... P02554 33544599
    583925 6y4m:B (3.34) BS02 O9B ? GO:0000226 ... P02554 33544599
    583926 6y4m:B (3.34) BS03 O9H ? GO:0000226 ... P02554 33544599
    583927 6y4m:B (3.34) BS04 OH5 ? GO:0000226 ... P02554 33544599
    583928 6y4m:C (3.34) BS01 O9B 3.6.5.- GO:0000226 ... Q2XVP4 33544599
    583929 6y4m:C (3.34) BS02 O9H 3.6.5.- GO:0000226 ... Q2XVP4 33544599
    583930 6y4m:C (3.34) BS03 GTP 3.6.5.- GO:0000226 ... Q2XVP4 33544599
    583931 6y4m:C (3.34) BS04 CA 3.6.5.- GO:0000226 ... Q2XVP4 33544599
    583932 6y4m:C (3.34) BS05 VAL 3.6.5.- GO:0000226 ... Q2XVP4 33544599
    583933 6y4m:D (3.34) BS01 GTP ? GO:0000226 ... P02554 33544599
    583934 6y4m:F (3.34) BS01 ACP N/A GO:0036211 ... N/A 33544599
    583935 6y4n:A (2.852) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 33544599
    583936 6y4n:A (2.852) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 33544599
    583937 6y4n:B (2.852) BS01 GDP ? GO:0000226 ... P02554 33544599
    583938 6y4n:B (2.852) BS02 O9B ? GO:0000226 ... P02554 33544599
    583939 6y4n:B (2.852) BS03 O9K ? GO:0000226 ... P02554 33544599
    583940 6y4n:B (2.852) BS04 O9N ? GO:0000226 ... P02554 33544599
    583941 6y4n:C (2.852) BS01 O9B 3.6.5.- GO:0000226 ... Q2XVP4 33544599
    583942 6y4n:C (2.852) BS02 O9K 3.6.5.- GO:0000226 ... Q2XVP4 33544599
    583943 6y4n:C (2.852) BS03 GTP 3.6.5.- GO:0000226 ... Q2XVP4 33544599
    583944 6y4n:C (2.852) BS04 CA 3.6.5.- GO:0000226 ... Q2XVP4 33544599
    583945 6y4n:C (2.852) BS05 VAL 3.6.5.- GO:0000226 ... Q2XVP4 33544599
    583946 6y4n:D (2.852) BS01 GTP ? GO:0000226 ... P02554 33544599
    583947 6y4n:F (2.852) BS01 ACP N/A GO:0036211 ... N/A 33544599
    583948 6y4o:A (1.83549) BS01 peptide ? GO:0000086 ... P0DP23 32317284
    583949 6y4o:A (1.83549) BS02 CA ? GO:0000086 ... P0DP23 32317284
    583950 6y4o:A (1.83549) BS03 CA ? GO:0000086 ... P0DP23 32317284
    583951 6y4o:A (1.83549) BS04 CA ? GO:0000086 ... P0DP23 32317284
    583952 6y4o:A (1.83549) BS05 CA ? GO:0000086 ... P0DP23 32317284
    583953 6y4p:A (2.13326) BS01 peptide ? GO:0000086 ... P0DP23 32317284
    583954 6y4p:A (2.13326) BS02 CA ? GO:0000086 ... P0DP23 32317284
    583955 6y4p:A (2.13326) BS03 CA ? GO:0000086 ... P0DP23 32317284
    583956 6y4p:A (2.13326) BS04 CA ? GO:0000086 ... P0DP23 32317284
    583957 6y4p:A (2.13326) BS05 CA ? GO:0000086 ... P0DP23 32317284
    583958 6y4q:A (1.63) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 32390036
    583959 6y4q:B (1.63) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 32390036
    583960 6y4t:A (1.98) BS01 O8W 2.7.11.24 GO:0000077 ... P47811 33035818
    583961 6y4u:A (1.86) BS01 O98 2.7.11.24 GO:0000077 ... P47811 33035818
    583962 6y4v:A (1.75) BS01 O8Z 2.7.11.24 GO:0000077 ... P47811 33035818
    583963 6y4w:A (1.86) BS01 O8T 2.7.11.24 GO:0000077 ... P47811 33035818
    583964 6y4x:A (1.6) BS01 O8Q 2.7.11.24 GO:0000077 ... P47811 33035818
    583965 6y50:8 (4.1) BS01 rna ? GO:0000398 ... Q13435 32494006
    583966 6y50:9 (4.1) BS01 rna ? GO:0000375 ... Q12874 32494006
    583967 6y50:u (4.1) BS01 rna ? GO:0000245 ... O75533 32494006
    583968 6y50:y (4.1) BS01 ZN ? GO:0000398 ... Q7RTV0 32494006
    583969 6y53:b (7.1) BS01 rna ? GO:0000398 ... P08579 32494006
    583970 6y53:h (7.1) BS01 rna ? GO:0000245 ... P62316 32494006
    583971 6y53:k (7.1) BS01 rna ? GO:0000245 ... P62308 32494006
    583972 6y53:l (7.1) BS01 rna ? GO:0000243 ... P62318 32494006
    583973 6y54:H (2.67) BS01 OOW N/A N/A N/A 33158970
    583974 6y54:L (2.67) BS01 OOW N/A N/A N/A 33158970
    583975 6y54:L (2.67) BS02 OA8 N/A N/A N/A 33158970
    583976 6y54:L (2.67) BS03 OAB N/A N/A N/A 33158970
    583977 6y54:M (2.67) BS01 OOW N/A N/A N/A 33158970
    583978 6y54:N (2.67) BS01 OOW N/A N/A N/A 33158970
    583979 6y54:N (2.67) BS02 OA8 N/A N/A N/A 33158970
    583980 6y54:N (2.67) BS03 OAB N/A N/A N/A 33158970
    583981 6y54:O (2.67) BS01 OOW N/A N/A N/A 33158970
    583982 6y54:P (2.67) BS01 OOW N/A N/A N/A 33158970
    583983 6y54:P (2.67) BS02 OA8 N/A N/A N/A 33158970
    583984 6y54:P (2.67) BS03 OAB N/A N/A N/A 33158970
    583985 6y55:A (2.38) BS01 O9Q 2.4.1.1 GO:0000166 ... P00489 32771768 MOAD: Ki=2.23uM
    583986 6y57:LA (3.5) BS01 rna ? GO:0002181 ... P62917 32268098
    583987 6y57:LA (3.5) BS02 rna ? GO:0002181 ... P62917 32268098
    583988 6y57:LB (3.5) BS01 rna ? GO:0002181 ... P39023 32268098
    583989 6y57:LC (3.5) BS01 rna ? GO:0002181 ... P36578 32268098
    583990 6y57:LC (3.5) BS02 rna ? GO:0002181 ... P36578 32268098
    583991 6y57:LD (3.5) BS01 rna ? GO:0000027 ... P46777 32268098
    583992 6y57:LD (3.5) BS02 rna ? GO:0000027 ... P46777 32268098
    583993 6y57:LE (3.5) BS01 rna ? GO:0002181 ... Q02878 32268098
    583994 6y57:LF (3.5) BS01 rna ? GO:0000463 ... P18124 32268098
    583995 6y57:LF (3.5) BS02 rna ? GO:0000463 ... P18124 32268098
    583996 6y57:LG (3.5) BS01 rna ? GO:0000470 ... P62424 32268098
    583997 6y57:LG (3.5) BS02 rna ? GO:0000470 ... P62424 32268098
    583998 6y57:LH (3.5) BS01 rna ? GO:0002181 ... P32969 32268098
    583999 6y57:LI (3.5) BS01 rna ? GO:0000027 ... Q96L21 32268098
    584000 6y57:LI (3.5) BS02 rna ? GO:0000027 ... Q96L21 32268098

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).