SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2911 2912 2913 2914 2915 2916 2917 2918 2919 2920 2921 2922 2923 2924 2925 2926 2927 2928 2929 2930 2931 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    584001 6y57:LJ (3.5) BS01 rna ? GO:0000027 ... P62913 32268098
    584002 6y57:LJ (3.5) BS02 rna ? GO:0000027 ... P62913 32268098
    584003 6y57:LL (3.5) BS01 rna ? GO:0001824 ... P26373 32268098
    584004 6y57:LL (3.5) BS02 rna ? GO:0001824 ... P26373 32268098
    584005 6y57:LM (3.5) BS01 rna ? GO:0002181 ... P50914 32268098
    584006 6y57:LN (3.5) BS01 rna ? GO:0002181 ... P61313 32268098
    584007 6y57:LN (3.5) BS02 rna ? GO:0002181 ... P61313 32268098
    584008 6y57:LO (3.5) BS01 rna ? GO:0002181 ... P40429 32268098
    584009 6y57:LP (3.5) BS01 rna ? GO:0002181 ... P18621 32268098
    584010 6y57:LP (3.5) BS02 rna ? GO:0002181 ... P18621 32268098
    584011 6y57:LQ (3.5) BS01 rna ? GO:0002181 ... Q07020 32268098
    584012 6y57:LR (3.5) BS01 rna ? GO:0002181 ... P84098 32268098
    584013 6y57:LR (3.5) BS02 rna ? GO:0002181 ... P84098 32268098
    584014 6y57:LS (3.5) BS01 rna ? GO:0002181 ... Q02543 32268098
    584015 6y57:LS (3.5) BS02 rna ? GO:0002181 ... Q02543 32268098
    584016 6y57:LT (3.5) BS01 rna ? GO:0002181 ... P46778 32268098
    584017 6y57:LT (3.5) BS02 rna ? GO:0002181 ... P46778 32268098
    584018 6y57:LU (3.5) BS01 rna ? GO:0002181 ... P35268 32268098
    584019 6y57:LV (3.5) BS01 rna ? GO:0000122 ... P62829 32268098
    584020 6y57:LV (3.5) BS02 rna ? GO:0000122 ... P62829 32268098
    584021 6y57:LW (3.5) BS01 rna ? GO:0000027 ... P83731 32268098
    584022 6y57:LW (3.5) BS02 rna ? GO:0000027 ... P83731 32268098
    584023 6y57:LX (3.5) BS01 rna ? GO:0002181 ... P62750 32268098
    584024 6y57:LX (3.5) BS02 rna ? GO:0002181 ... P62750 32268098
    584025 6y57:LY (3.5) BS01 rna ? GO:0002181 ... P61254 32268098
    584026 6y57:LY (3.5) BS02 rna ? GO:0002181 ... P61254 32268098
    584027 6y57:LZ (3.5) BS01 rna ? GO:0002181 ... P61353 32268098
    584028 6y57:La (3.5) BS01 rna ? GO:0002181 ... P46776 32268098
    584029 6y57:Lb (3.5) BS01 rna ? GO:0002181 ... P47914 32268098
    584030 6y57:Lc (3.5) BS01 rna ? GO:0002181 ... P62888 32268098
    584031 6y57:Ld (3.5) BS01 rna ? GO:0002181 ... P62899 32268098
    584032 6y57:Le (3.5) BS01 rna ? GO:0002181 ... P62910 32268098
    584033 6y57:Lf (3.5) BS01 rna ? GO:0000049 ... P18077 32268098
    584034 6y57:Lg (3.5) BS01 rna ? GO:0002181 ... P49207 32268098
    584035 6y57:Lg (3.5) BS02 ZN ? GO:0002181 ... P49207 32268098
    584036 6y57:Lh (3.5) BS01 rna ? GO:0000463 ... P42766 32268098
    584037 6y57:Lh (3.5) BS02 rna ? GO:0000463 ... P42766 32268098
    584038 6y57:Li (3.5) BS01 rna ? GO:0002181 ... Q9Y3U8 32268098
    584039 6y57:Lj (3.5) BS01 rna ? GO:0002181 ... P61927 32268098
    584040 6y57:Lj (3.5) BS02 rna ? GO:0002181 ... P61927 32268098
    584041 6y57:Lj (3.5) BS03 ZN ? GO:0002181 ... P61927 32268098
    584042 6y57:Lk (3.5) BS01 rna ? GO:0001501 ... P63173 32268098
    584043 6y57:Ll (3.5) BS01 rna ? GO:0002181 ... P62891 32268098
    584044 6y57:Ll (3.5) BS02 rna ? GO:0002181 ... P62891 32268098
    584045 6y57:Lm (3.5) BS01 rna ? GO:0002181 ... P62987 32268098
    584046 6y57:Lm (3.5) BS02 ZN ? GO:0002181 ... P62987 32268098
    584047 6y57:Lo (3.5) BS01 rna ? GO:0002181 ... P83881 32268098
    584048 6y57:Lo (3.5) BS02 rna ? GO:0002181 ... P83881 32268098
    584049 6y57:Lp (3.5) BS01 rna ? GO:0002181 ... P61513 32268098
    584050 6y57:Lp (3.5) BS02 ZN ? GO:0002181 ... P61513 32268098
    584051 6y57:Lr (3.5) BS01 rna ? GO:0002181 ... P46779 32268098
    584052 6y57:SA (3.5) BS01 rna ? GO:0000028 ... P08865 32268098
    584053 6y57:SB (3.5) BS01 rna ? GO:0002181 ... P61247 32268098
    584054 6y57:SC (3.5) BS01 rna ? GO:0002181 ... P15880 32268098
    584055 6y57:SD (3.5) BS01 rna 4.2.99.18 GO:0000977 ... P23396 32268098
    584056 6y57:SE (3.5) BS01 rna ? GO:0002181 ... P62701 32268098
    584057 6y57:SF (3.5) BS01 rna ? GO:0000028 ... P46782 32268098
    584058 6y57:SG (3.5) BS01 rna ? GO:0000082 ... P62753 32268098
    584059 6y57:SH (3.5) BS01 rna ? GO:0001843 ... P62081 32268098
    584060 6y57:SI (3.5) BS01 rna ? GO:0000462 ... P62241 32268098
    584061 6y57:SI (3.5) BS02 rna ? GO:0000462 ... P62241 32268098
    584062 6y57:SJ (3.5) BS01 rna ? GO:0002181 ... P46781 32268098
    584063 6y57:SK (3.5) BS01 rna ? GO:0002181 ... P46783 32268098
    584064 6y57:SL (3.5) BS01 rna ? GO:0002181 ... P62280 32268098
    584065 6y57:SN (3.5) BS01 rna ? GO:0002181 ... P62277 32268098
    584066 6y57:SO (3.5) BS01 rna ? GO:0000028 ... P62263 32268098
    584067 6y57:SP (3.5) BS01 rna ? GO:0000028 ... P62841 32268098
    584068 6y57:SQ (3.5) BS01 rna ? GO:0000462 ... P62249 32268098
    584069 6y57:SR (3.5) BS01 rna ? GO:0002181 ... P08708 32268098
    584070 6y57:SS (3.5) BS01 rna ? GO:0002181 ... P62269 32268098
    584071 6y57:ST (3.5) BS01 rna ? GO:0000028 ... P39019 32268098
    584072 6y57:SU (3.5) BS01 rna ? GO:0002181 ... P60866 32268098
    584073 6y57:SW (3.5) BS01 rna ? GO:0002181 ... P62244 32268098
    584074 6y57:SX (3.5) BS01 rna ? GO:0002181 ... P62266 32268098
    584075 6y57:SY (3.5) BS01 rna ? GO:0002181 ... P62847 32268098
    584076 6y57:SZ (3.5) BS01 rna ? GO:0002181 ... P62851 32268098
    584077 6y57:Sa (3.5) BS01 rna ? GO:0002181 ... P62854 32268098
    584078 6y57:Sa (3.5) BS02 ZN ? GO:0002181 ... P62854 32268098
    584079 6y57:Sb (3.5) BS01 rna ? GO:0000028 ... P42677 32268098
    584080 6y57:Sc (3.5) BS01 rna ? GO:0000028 ... P62857 32268098
    584081 6y57:Sd (3.5) BS01 rna ? GO:0002181 ... P62273 32268098
    584082 6y57:Sd (3.5) BS02 ZN ? GO:0002181 ... P62273 32268098
    584083 6y57:Se (3.5) BS01 rna ? GO:0003735 ... P62861 32268098
    584084 6y57:Sf (3.5) BS01 rna ? GO:0002181 ... P25398 32268098
    584085 6y57:Sg (3.5) BS01 rna ? GO:0001891 ... P63244 32268098
    584086 6y57:sh (3.5) BS01 rna ? GO:0002181 ... P62979 32268098
    584087 6y58:A (1.904) BS01 peptide ? GO:0000122 ... P31947 33196173
    584088 6y58:A (1.904) BS02 MG ? GO:0000122 ... P31947 33196173
    584089 6y5a:A (2.8) BS01 SRO ? GO:0004888 ... P23979 33594077 BindingDB: Ki=361nM, EC50=3400nM
    584090 6y5a:A (2.8) BS02 SRO ? GO:0004888 ... P23979 33594077 BindingDB: Ki=361nM, EC50=3400nM
    584091 6y5a:B (2.8) BS01 SRO ? GO:0004888 ... P23979 33594077 BindingDB: Ki=361nM, EC50=3400nM
    584092 6y5a:B (2.8) BS02 SRO ? GO:0004888 ... P23979 33594077 BindingDB: Ki=361nM, EC50=3400nM
    584093 6y5a:C (2.8) BS01 SRO ? GO:0004888 ... P23979 33594077 BindingDB: Ki=361nM, EC50=3400nM
    584094 6y5a:C (2.8) BS02 SRO ? GO:0004888 ... P23979 33594077 BindingDB: Ki=361nM, EC50=3400nM
    584095 6y5a:D (2.8) BS01 SRO ? GO:0004888 ... P23979 33594077 BindingDB: Ki=361nM, EC50=3400nM
    584096 6y5a:D (2.8) BS02 SRO ? GO:0004888 ... P23979 33594077 BindingDB: Ki=361nM, EC50=3400nM
    584097 6y5a:E (2.8) BS01 SRO ? GO:0004888 ... P23979 33594077 BindingDB: Ki=361nM, EC50=3400nM
    584098 6y5a:E (2.8) BS02 SRO ? GO:0004888 ... P23979 33594077 BindingDB: Ki=361nM, EC50=3400nM
    584099 6y5c:A (2.4) BS01 O9T 2.4.1.1 GO:0000166 ... P00489 32771768 MOAD: Ki=21.36uM
    584100 6y5d:A (4.1) BS01 dna ? GO:0000786 ... Q71DI3 32911482
    584101 6y5d:A (4.1) BS02 dna ? GO:0000786 ... Q71DI3 32911482
    584102 6y5d:B (4.1) BS01 dna ? GO:0000781 ... P62805 32911482
    584103 6y5d:B (4.1) BS02 dna ? GO:0000781 ... P62805 32911482
    584104 6y5d:C (4.1) BS01 dna ? GO:0000786 ... Q6FI13 32911482
    584105 6y5d:C (4.1) BS02 dna ? GO:0000786 ... Q6FI13 32911482
    584106 6y5d:D (4.1) BS01 dna ? GO:0000786 ... O60814 32911482
    584107 6y5d:D (4.1) BS02 dna ? GO:0000786 ... O60814 32911482
    584108 6y5d:E (4.1) BS01 dna ? GO:0000786 ... Q71DI3 32911482
    584109 6y5d:E (4.1) BS02 dna ? GO:0000786 ... Q71DI3 32911482
    584110 6y5d:F (4.1) BS01 dna ? GO:0000781 ... P62805 32911482
    584111 6y5d:G (4.1) BS01 dna ? GO:0000786 ... Q6FI13 32911482
    584112 6y5d:G (4.1) BS02 dna ? GO:0000786 ... Q6FI13 32911482
    584113 6y5d:H (4.1) BS01 dna ? GO:0000786 ... O60814 32911482
    584114 6y5d:H (4.1) BS02 dna ? GO:0000786 ... O60814 32911482
    584115 6y5d:K (4.1) BS01 dna 2.7.7.86 N/A Q8N884 32911482
    584116 6y5d:K (4.1) BS02 ZN 2.7.7.86 N/A Q8N884 32911482
    584117 6y5d:L (4.1) BS01 dna 2.7.7.86 N/A Q8N884 32911482
    584118 6y5d:L (4.1) BS02 ZN 2.7.7.86 N/A Q8N884 32911482
    584119 6y5d:M (4.1) BS01 dna ? GO:0000786 ... Q71DI3 32911482
    584120 6y5d:M (4.1) BS02 dna ? GO:0000786 ... Q71DI3 32911482
    584121 6y5d:N (4.1) BS01 dna ? GO:0000781 ... P62805 32911482
    584122 6y5d:O (4.1) BS01 dna ? GO:0000786 ... Q6FI13 32911482
    584123 6y5d:O (4.1) BS02 dna ? GO:0000786 ... Q6FI13 32911482
    584124 6y5d:P (4.1) BS01 dna ? GO:0000786 ... O60814 32911482
    584125 6y5d:Q (4.1) BS01 dna ? GO:0000786 ... Q71DI3 32911482
    584126 6y5d:Q (4.1) BS02 dna ? GO:0000786 ... Q71DI3 32911482
    584127 6y5d:R (4.1) BS01 dna ? GO:0000781 ... P62805 32911482
    584128 6y5d:R (4.1) BS02 dna ? GO:0000781 ... P62805 32911482
    584129 6y5d:S (4.1) BS01 dna ? GO:0000786 ... Q6FI13 32911482
    584130 6y5d:T (4.1) BS01 dna ? GO:0000786 ... O60814 32911482
    584131 6y5d:T (4.1) BS02 dna ? GO:0000786 ... O60814 32911482
    584132 6y5e:A (3.15) BS01 dna ? GO:0000786 ... Q71DI3 32911482
    584133 6y5e:A (3.15) BS02 dna ? GO:0000786 ... Q71DI3 32911482
    584134 6y5e:B (3.15) BS01 dna ? GO:0003677 ... P62805 32911482
    584135 6y5e:B (3.15) BS02 dna ? GO:0003677 ... P62805 32911482
    584136 6y5e:C (3.15) BS01 dna ? GO:0000786 ... Q16777 32911482
    584137 6y5e:C (3.15) BS02 dna ? GO:0000786 ... Q16777 32911482
    584138 6y5e:D (3.15) BS01 dna ? GO:0000786 ... O60814 32911482
    584139 6y5e:D (3.15) BS02 dna ? GO:0000786 ... O60814 32911482
    584140 6y5e:E (3.15) BS01 dna ? GO:0000786 ... Q71DI3 32911482
    584141 6y5e:E (3.15) BS02 dna ? GO:0000786 ... Q71DI3 32911482
    584142 6y5e:F (3.15) BS01 dna ? GO:0003677 ... P62805 32911482
    584143 6y5e:G (3.15) BS01 dna ? GO:0000786 ... Q16777 32911482
    584144 6y5e:G (3.15) BS02 dna ? GO:0000786 ... Q16777 32911482
    584145 6y5e:H (3.15) BS01 dna ? GO:0000786 ... O60814 32911482
    584146 6y5e:H (3.15) BS02 dna ? GO:0000786 ... O60814 32911482
    584147 6y5e:K (3.15) BS01 dna 2.7.7.86 N/A Q8N884 32911482
    584148 6y5e:K (3.15) BS02 ZN 2.7.7.86 N/A Q8N884 32911482
    584149 6y5f:B (3.2) BS01 MAN ? GO:0019049 ... Q9E006 32937107
    584150 6y5j:E (5.6) BS01 BMA ? GO:0019031 ... P03437 32461688
    584151 6y5m:A (2.011) BS01 MAN 3.1.4.39 GO:0003676 ... Q9R1E6 33160025
    584152 6y5m:A (2.011) BS02 ZN 3.1.4.39 GO:0003676 ... Q9R1E6 33160025
    584153 6y5m:A (2.011) BS03 ZN 3.1.4.39 GO:0003676 ... Q9R1E6 33160025
    584154 6y5m:A (2.011) BS04 O9W 3.1.4.39 GO:0003676 ... Q9R1E6 33160025 MOAD: ic50=9.6nM
    584155 6y5n:A (1.88) BS01 ZN 2.3.2.27 GO:0007219 ... Q86Y01 32948590
    584156 6y5n:A (1.88) BS02 ZN 2.3.2.27 GO:0007219 ... Q86Y01 32948590
    584157 6y5n:B (1.88) BS01 ZN 2.3.2.27 GO:0007219 ... Q86Y01 32948590
    584158 6y5n:B (1.88) BS02 ZN 2.3.2.27 GO:0007219 ... Q86Y01 32948590
    584159 6y5o:A (2.33) BS01 O9Z 2.4.1.1 GO:0000166 ... P00489 32771768 MOAD: Ki=3.89uM
    584160 6y5p:A (1.74) BS01 NAD 2.3.2.27 GO:0007219 ... Q86Y01 32948590
    584161 6y5p:A (1.74) BS02 ZN 2.3.2.27 GO:0007219 ... Q86Y01 32948590
    584162 6y5p:A (1.74) BS03 ZN 2.3.2.27 GO:0007219 ... Q86Y01 32948590
    584163 6y5p:B (1.74) BS01 NAD 2.3.2.27 GO:0007219 ... Q86Y01 32948590
    584164 6y5p:B (1.74) BS02 ZN 2.3.2.27 GO:0007219 ... Q86Y01 32948590
    584165 6y5p:B (1.74) BS03 ZN 2.3.2.27 GO:0007219 ... Q86Y01 32948590
    584166 6y5q:b (7.1) BS01 rna ? GO:0000398 ... P08579 32494006
    584167 6y5q:h (7.1) BS01 rna ? GO:0000245 ... P62316 32494006
    584168 6y5q:k (7.1) BS01 rna ? GO:0000245 ... P62308 32494006
    584169 6y5q:l (7.1) BS01 rna ? GO:0000243 ... P62318 32494006
    584170 6y5q:u (7.1) BS01 rna ? GO:0000245 ... O75533 32494006
    584171 6y5s:A (0.95) BS01 CA 3.4.21.62 GO:0004252 ... P29600 32617193
    584172 6y5t:A (1.1) BS01 CA 3.4.21.62 GO:0004252 ... P29600 32617193
    584173 6y5x:A (2.3) BS01 MG ? GO:0005198 ... A0A024B5J2 32723915
    584174 6y5x:C (2.3) BS01 MG ? GO:0005198 ... A0A024B5J2 32723915
    584175 6y5x:D (2.3) BS01 MG ? GO:0005198 ... A0A024B5J2 32723915
    584176 6y5x:E (2.3) BS01 MG ? GO:0005198 ... A0A024B5J2 32723915
    584177 6y5x:I (2.3) BS01 MG ? GO:0005198 ... A0A024B5J2 32723915
    584178 6y5y:A (1.8) BS01 SIA ? GO:0005198 ... A0A024B5J2 32723915
    584179 6y5y:B (1.8) BS01 SIA ? GO:0005198 ... A0A024B5J2 32723915
    584180 6y5y:C (1.8) BS01 SIA ? GO:0005198 ... A0A024B5J2 32723915
    584181 6y5y:D (1.8) BS01 SIA ? GO:0005198 ... A0A024B5J2 32723915
    584182 6y5y:E (1.8) BS01 GAL ? GO:0005198 ... A0A024B5J2 32723915
    584183 6y5y:E (1.8) BS02 SIA ? GO:0005198 ... A0A024B5J2 32723915
    584184 6y5y:F (1.8) BS01 SIA ? GO:0005198 ... A0A024B5J2 32723915
    584185 6y5y:G (1.8) BS01 SIA ? GO:0005198 ... A0A024B5J2 32723915
    584186 6y5y:H (1.8) BS01 SIA ? GO:0005198 ... A0A024B5J2 32723915
    584187 6y5y:I (1.8) BS01 GAL ? GO:0005198 ... A0A024B5J2 32723915
    584188 6y5y:I (1.8) BS02 SIA ? GO:0005198 ... A0A024B5J2 32723915
    584189 6y5y:J (1.8) BS01 SIA ? GO:0005198 ... A0A024B5J2 32723915
    584190 6y60:AAA (1.798) BS01 SIA ? GO:0005198 ... M4T5D3 32723915
    584191 6y60:BBB (1.798) BS01 SIA ? GO:0005198 ... M4T5D3 32723915
    584192 6y60:CCC (1.798) BS01 SIA ? GO:0005198 ... M4T5D3 32723915
    584193 6y60:DDD (1.798) BS01 SIA ? GO:0005198 ... M4T5D3 32723915
    584194 6y60:EEE (1.798) BS01 SIA ? GO:0005198 ... M4T5D3 32723915
    584195 6y60:EEE (1.798) BS02 GAL ? GO:0005198 ... M4T5D3 32723915
    584196 6y60:FFF (1.798) BS01 SIA ? GO:0005198 ... M4T5D3 32723915
    584197 6y60:GGG (1.798) BS01 SIA ? GO:0005198 ... M4T5D3 32723915
    584198 6y60:HHH (1.798) BS01 SIA ? GO:0005198 ... M4T5D3 32723915
    584199 6y60:III (1.798) BS01 SIA ? GO:0005198 ... M4T5D3 32723915
    584200 6y60:JJJ (1.798) BS01 SIA ? GO:0005198 ... M4T5D3 32723915

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).