SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    585201 6yba:A (4.0) BS02 peptide ? GO:0005198 ... P11820 33627423
    585202 6yba:B (4.0) BS01 peptide ? GO:0005198 ... P11820 33627423
    585203 6yba:C (4.0) BS01 peptide ? GO:0005198 ... P11820 33627423
    585204 6yba:D (4.0) BS01 peptide ? GO:0005198 ... P11820 33627423
    585205 6yba:D (4.0) BS02 peptide ? GO:0005198 ... P11820 33627423
    585206 6yba:E (4.0) BS01 peptide ? GO:0005198 ... P11820 33627423
    585207 6yba:F (4.0) BS01 peptide ? GO:0005198 ... P11820 33627423
    585208 6yba:F (4.0) BS02 peptide ? GO:0005198 ... P11820 33627423
    585209 6yba:G (4.0) BS01 peptide ? GO:0005198 ... P11820 33627423
    585210 6yba:I (4.0) BS01 peptide ? GO:0005198 ... P11820 33627423
    585211 6yba:N (4.0) BS01 peptide ? GO:0019028 ... Q67716 33627423
    585212 6ybb:A (2.9) BS01 peptide ? GO:0005524 ... P0DP92 33563593
    585213 6ybb:A (2.9) BS02 ATP ? GO:0005524 ... P0DP92 33563593
    585214 6ybb:A (2.9) BS03 ATP ? GO:0005524 ... P0DP92 33563593
    585215 6ybb:B (2.9) BS01 peptide ? GO:0005524 ... P0DP92 33563593
    585216 6ybb:B (2.9) BS02 ATP ? GO:0005524 ... P0DP92 33563593
    585217 6ybb:E (2.9) BS01 C2E ? GO:0035438 ... P37657 33563593
    585218 6ybb:E (2.9) BS02 C2E ? GO:0035438 ... P37657 33563593
    585219 6ybb:F (2.9) BS01 C2E ? GO:0035438 ... P37657 33563593
    585220 6ybb:F (2.9) BS02 C2E ? GO:0035438 ... P37657 33563593
    585221 6ybg:A (2.1) BS01 OJT ? GO:0003824 ... Q07820 33146521 MOAD: Ki=13nM
    585222 6ybg:B (2.1) BS01 OJT ? GO:0003824 ... Q07820 33146521 MOAD: Ki=13nM
    585223 6ybh:A (2.4) BS01 8LK 2.7.1.145 GO:0005524 ... Q9XZT6 35102291
    585224 6ybh:B (2.4) BS01 8LK 2.7.1.145 GO:0005524 ... Q9XZT6 35102291
    585225 6ybh:C (2.4) BS01 8LK 2.7.1.145 GO:0005524 ... Q9XZT6 35102291
    585226 6ybh:D (2.4) BS01 8LK 2.7.1.145 GO:0005524 ... Q9XZT6 35102291
    585227 6ybh:E (2.4) BS01 8LK 2.7.1.145 GO:0005524 ... Q9XZT6 35102291
    585228 6ybh:F (2.4) BS01 8LK 2.7.1.145 GO:0005524 ... Q9XZT6 35102291
    585229 6ybj:A (2.5) BS01 GLC ? GO:0005515 ... P0AEX9
    Q07820
    33146521
    585230 6ybj:A (2.5) BS02 GLC ? GO:0005515 ... P0AEX9
    Q07820
    33146521
    585231 6ybj:A (2.5) BS03 OJW ? GO:0005515 ... P0AEX9
    Q07820
    33146521 MOAD: Ki=0.86nM
    585232 6ybk:A (2.0) BS01 GLC ? GO:0005515 ... P0AEX9
    Q07820
    33146521
    585233 6ybk:A (2.0) BS02 GLC ? GO:0005515 ... P0AEX9
    Q07820
    33146521
    585234 6ybk:A (2.0) BS03 OK2 ? GO:0005515 ... P0AEX9
    Q07820
    33146521 MOAD: Ki=5nM
    585235 6ybl:A (2.1) BS01 GLC ? GO:0005515 ... P0AEX9
    Q07820
    33146521
    585236 6ybl:A (2.1) BS02 GLC ? GO:0005515 ... P0AEX9
    Q07820
    33146521
    585237 6ybl:A (2.1) BS03 OK5 ? GO:0005515 ... P0AEX9
    Q07820
    33146521 MOAD: Ki=0.029nM
    585238 6ybo:A (1.06) BS01 MG 5.3.1.5 GO:0000287 ... P24300 32744257
    585239 6ybo:A (1.06) BS02 MG 5.3.1.5 GO:0000287 ... P24300 32744257
    585240 6ybp:A (3.48) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 N/A
    585241 6ybp:F (3.48) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 N/A
    585242 6ybp:F (3.48) BS02 BTI 6.4.1.3 GO:0004658 ... C5AP75 N/A
    585243 6ybq:A (1.96) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 N/A
    585244 6ybq:A (1.96) BS02 COA 6.4.1.3 GO:0004658 ... C5AP75 N/A
    585245 6ybq:C (1.96) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 N/A
    585246 6ybq:D (1.96) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 N/A
    585247 6ybq:D (1.96) BS02 COA 6.4.1.3 GO:0004658 ... C5AP75 N/A
    585248 6ybq:E (1.96) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 N/A
    585249 6ybq:E (1.96) BS02 COA 6.4.1.3 GO:0004658 ... C5AP75 N/A
    585250 6ybq:F (1.96) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 N/A
    585251 6ybq:F (1.96) BS02 COA 6.4.1.3 GO:0004658 ... C5AP75 N/A
    585252 6ybq:G (1.96) BS01 BTI 6.4.1.3 GO:0004658 ... C5AWU5 N/A
    585253 6ybq:H (1.96) BS01 BTI 6.4.1.3 GO:0004658 ... C5AWU5 N/A
    585254 6ybq:I (1.96) BS01 BTI 6.4.1.3 GO:0004658 ... C5AWU5 N/A
    585255 6ybq:J (1.96) BS01 BTI 6.4.1.3 GO:0004658 ... C5AWU5 N/A
    585256 6ybq:K (1.96) BS01 BTI 6.4.1.3 GO:0004658 ... C5AWU5 N/A
    585257 6ybq:L (1.96) BS01 BTI 6.4.1.3 GO:0004658 ... C5AWU5 N/A
    585258 6ybr:A (1.2) BS01 MG 5.3.1.5 GO:0000287 ... P24300 32744257
    585259 6ybr:A (1.2) BS02 MG 5.3.1.5 GO:0000287 ... P24300 32744257
    585260 6ybs:V (3.1) BS01 rna ? GO:0000028 ... P46782 32883864
    585261 6ybs:V (3.1) BS02 MG ? GO:0000028 ... P46782 32883864
    585262 6ybs:X (3.1) BS01 rna ? GO:0002181 ... P08708 32883864
    585263 6ybs:Y (3.1) BS01 rna ? GO:0000462 ... P62249 32883864
    585264 6ybs:Z (3.1) BS01 rna 4.2.99.18 GO:0000977 ... P23396 32883864
    585265 6ybs:a (3.1) BS01 rna ? GO:0002181 ... P46783 32883864
    585266 6ybs:b (3.1) BS01 rna ? GO:0000028 ... P62841 32883864
    585267 6ybs:c (3.1) BS01 rna ? GO:0001891 ... P63244 32883864
    585268 6ybs:d (3.1) BS01 rna ? GO:0000028 ... P39019 32883864
    585269 6ybs:e (3.1) BS01 rna ? GO:0002181 ... P62851 32883864
    585270 6ybs:f (3.1) BS01 rna ? GO:0002181 ... P62269 32883864
    585271 6ybs:f (3.1) BS02 MG ? GO:0002181 ... P62269 32883864
    585272 6ybs:h (3.1) BS01 rna ? GO:0002181 ... P60866 32883864
    585273 6ybs:i (3.1) BS01 rna ? GO:0002181 ... P62273 32883864
    585274 6ybs:k (3.1) BS01 rna ? GO:0002181 ... P62979 32883864
    585275 6ybs:k (3.1) BS02 ZN ? GO:0002181 ... P62979 32883864
    585276 6ybs:m (3.1) BS01 rna ? GO:0002181 ... P25398 32883864
    585277 6ybs:n (3.1) BS01 rna ? GO:0000028 ... P62857 32883864
    585278 6ybu:A (2.49) BS01 peptide ? GO:0005524 ... P0DP92 33563593
    585279 6ybu:A (2.49) BS02 peptide ? GO:0005524 ... P0DP92 33563593
    585280 6ybu:A (2.49) BS03 ATP ? GO:0005524 ... P0DP92 33563593
    585281 6ybu:A (2.49) BS04 ATP ? GO:0005524 ... P0DP92 33563593
    585282 6ybu:B (2.49) BS01 peptide ? GO:0005524 ... P0DP92 33563593
    585283 6ybu:B (2.49) BS02 peptide ? GO:0005524 ... P0DP92 33563593
    585284 6ybu:B (2.49) BS03 ATP ? GO:0005524 ... P0DP92 33563593
    585285 6ybu:B (2.49) BS04 ATP ? GO:0005524 ... P0DP92 33563593
    585286 6ybu:E (2.49) BS01 C2E ? GO:0035438 ... P37657 33563593
    585287 6ybu:E (2.49) BS02 C2E ? GO:0035438 ... P37657 33563593
    585288 6ybu:F (2.49) BS01 C2E ? GO:0035438 ... P37657 33563593
    585289 6ybu:F (2.49) BS02 C2E ? GO:0035438 ... P37657 33563593
    585290 6ybu:G (2.49) BS01 ATP ? GO:0005524 ... P0DP92 33563593
    585291 6ybu:G (2.49) BS02 ATP ? GO:0005524 ... P0DP92 33563593
    585292 6ybu:H (2.49) BS01 ATP ? GO:0005524 ... P0DP92 33563593
    585293 6ybu:H (2.49) BS02 ATP ? GO:0005524 ... P0DP92 33563593
    585294 6ybu:K (2.49) BS01 C2E ? GO:0035438 ... P37657 33563593
    585295 6ybu:K (2.49) BS02 C2E ? GO:0035438 ... P37657 33563593
    585296 6ybu:L (2.49) BS01 C2E ? GO:0035438 ... P37657 33563593
    585297 6ybu:L (2.49) BS02 C2E ? GO:0035438 ... P37657 33563593
    585298 6ybv:r (3.8) BS01 rna ? GO:0000423 ... P05198 32883864
    585299 6ybv:s (3.8) BS01 rna ? GO:0001701 ... P20042 32883864
    585300 6ybv:t (3.8) BS01 rna 3.6.5.3 GO:0000049 ... P41091 32883864
    585301 6ybw:B (3.1) BS01 rna ? GO:0002181 ... P62280 32883864
    585302 6ybw:C (3.1) BS01 rna ? GO:0002181 ... P62701 32883864
    585303 6ybw:D (3.1) BS01 rna ? GO:0002181 ... P46781 32883864
    585304 6ybw:E (3.1) BS01 rna ? GO:0002181 ... P62266 32883864
    585305 6ybw:F (3.1) BS01 rna ? GO:0003735 ... P62861 32883864
    585306 6ybw:G (3.1) BS01 rna ? GO:0001843 ... P62081 32883864
    585307 6ybw:H (3.1) BS01 rna ? GO:0000028 ... P42677 32883864
    585308 6ybw:I (3.1) BS01 rna ? GO:0002181 ... P62277 32883864
    585309 6ybw:J (3.1) BS01 rna ? GO:0002181 ... P62244 32883864
    585310 6ybw:L (3.1) BS01 rna ? GO:0002181 ... P15880 32883864
    585311 6ybw:M (3.1) BS01 rna ? GO:0002181 ... P08708 32883864
    585312 6ybw:N (3.1) BS01 rna ? GO:0000028 ... P08865 32883864
    585313 6ybw:O (3.1) BS01 rna ? GO:0002181 ... P61247 32883864
    585314 6ybw:P (3.1) BS01 rna ? GO:0000028 ... P62263 32883864
    585315 6ybw:Q (3.1) BS01 rna ? GO:0002181 ... P62854 32883864
    585316 6ybw:Q (3.1) BS02 rna ? GO:0002181 ... P62854 32883864
    585317 6ybw:R (3.1) BS01 rna ? GO:0000462 ... P62241 32883864
    585318 6ybw:S (3.1) BS01 rna ? GO:0000082 ... P62753 32883864
    585319 6ybw:T (3.1) BS01 rna ? GO:0002181 ... P62847 32883864
    585320 6ybw:p (3.1) BS01 rna ? GO:0003723 ... P41567 32883864
    585321 6ybw:q (3.1) BS01 rna ? GO:0000049 ... P47813 32883864
    585322 6ybw:y (3.1) BS01 rna ? GO:0001732 ... Q99613 32883864
    585323 6ybw:z (3.1) BS01 rna ? GO:0001732 ... O75822 32883864
    585324 6yby:A (1.8) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585325 6yby:A (1.8) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585326 6ybz:A (2.35) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585327 6ybz:A (2.35) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585328 6ybz:B (2.35) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585329 6ybz:B (2.35) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585330 6ybz:C (2.35) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585331 6ybz:C (2.35) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585332 6ybz:D (2.35) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585333 6ybz:D (2.35) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585334 6ybz:E (2.35) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585335 6ybz:E (2.35) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585336 6yc0:A (2.7) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585337 6yc0:A (2.7) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585338 6yc0:A (2.7) BS03 NA ? GO:0016020 ... N0DKS8 32358514
    585339 6yc0:B (2.7) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585340 6yc0:B (2.7) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585341 6yc0:B (2.7) BS03 NA ? GO:0016020 ... N0DKS8 32358514
    585342 6yc0:C (2.7) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585343 6yc0:C (2.7) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585344 6yc0:C (2.7) BS03 NA ? GO:0016020 ... N0DKS8 32358514
    585345 6yc0:D (2.7) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585346 6yc0:D (2.7) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585347 6yc0:D (2.7) BS03 NA ? GO:0016020 ... N0DKS8 32358514
    585348 6yc0:E (2.7) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585349 6yc0:E (2.7) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585350 6yc0:E (2.7) BS03 NA ? GO:0016020 ... N0DKS8 32358514
    585351 6yc1:A (2.2) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585352 6yc1:A (2.2) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585353 6yc1:B (2.2) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585354 6yc1:B (2.2) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585355 6yc1:C (2.2) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585356 6yc1:C (2.2) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585357 6yc1:D (2.2) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585358 6yc1:D (2.2) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585359 6yc1:E (2.2) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585360 6yc1:E (2.2) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585361 6yc2:A (2.5) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585362 6yc2:B (2.5) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585363 6yc2:C (2.5) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585364 6yc2:D (2.5) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585365 6yc2:E (2.5) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585366 6yc3:A (2.0) BS01 RET ? GO:0016020 ... N0DKS8 32358514
    585367 6yc3:A (2.0) BS02 NA ? GO:0016020 ... N0DKS8 32358514
    585368 6yc3:B (2.0) BS01 RET ? GO:0016020 ... N0DKS8 32358514
    585369 6yc3:B (2.0) BS02 NA ? GO:0016020 ... N0DKS8 32358514
    585370 6yc3:C (2.0) BS01 RET ? GO:0016020 ... N0DKS8 32358514
    585371 6yc3:C (2.0) BS02 NA ? GO:0016020 ... N0DKS8 32358514
    585372 6yc3:D (2.0) BS01 RET ? GO:0016020 ... N0DKS8 32358514
    585373 6yc3:D (2.0) BS02 NA ? GO:0016020 ... N0DKS8 32358514
    585374 6yc3:E (2.0) BS01 RET ? GO:0016020 ... N0DKS8 32358514
    585375 6yc3:E (2.0) BS02 NA ? GO:0016020 ... N0DKS8 32358514
    585376 6yc4:A (2.6) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585377 6yc4:A (2.6) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585378 6yc4:A (2.6) BS03 NA ? GO:0016020 ... N0DKS8 32358514
    585379 6yc4:B (2.6) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585380 6yc4:B (2.6) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585381 6yc4:B (2.6) BS03 NA ? GO:0016020 ... N0DKS8 32358514
    585382 6yc4:C (2.6) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585383 6yc4:C (2.6) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585384 6yc4:C (2.6) BS03 NA ? GO:0016020 ... N0DKS8 32358514
    585385 6yc4:D (2.6) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585386 6yc4:D (2.6) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585387 6yc4:D (2.6) BS03 NA ? GO:0016020 ... N0DKS8 32358514
    585388 6yc4:E (2.6) BS01 NA ? GO:0016020 ... N0DKS8 32358514
    585389 6yc4:E (2.6) BS02 RET ? GO:0016020 ... N0DKS8 32358514
    585390 6yc4:E (2.6) BS03 NA ? GO:0016020 ... N0DKS8 32358514
    585391 6yc7:A (1.8) BS01 A5O ? GO:0000166 ... H7C694 33645536
    585392 6yc7:B (1.8) BS01 A5O ? GO:0000166 ... H7C694 33645536
    585393 6yc7:B (1.8) BS02 AMP ? GO:0000166 ... H7C694 33645536
    585394 6yc7:C (1.8) BS01 AMP ? GO:0000166 ... H7C694 33645536
    585395 6yc7:E (1.8) BS01 A5O ? GO:0000166 ... H7C694 33645536
    585396 6yc7:E (1.8) BS02 A5O ? GO:0000166 ... H7C694 33645536
    585397 6yc7:E (1.8) BS03 ADP ? GO:0000166 ... H7C694 33645536
    585398 6yc7:F (1.8) BS01 ADP ? GO:0000166 ... H7C694 33645536
    585399 6yc8:A (1.77) BS01 NAP ? GO:0000166 ... A0A0H4SN47 33486371
    585400 6yca:A (2.9) BS01 ACO 2.3.1.- GO:0008080 ... A0A418LDP6 32860271

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).