SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    586601 6yk9:E (1.7) BS01 GMP N/A GO:0019386 ... N/A 32061937
    586602 6yka:B (2.1) BS01 FE9 N/A GO:0019386 ... N/A 32061937
    586603 6ykb:A (1.55) BS01 5GP N/A GO:0019386 ... N/A 32061937
    586604 6ykb:C (1.55) BS01 5GP N/A GO:0019386 ... N/A 32061937
    586605 6ykc:A (1.2) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32955786
    586606 6ykc:A (1.2) BS02 OY8 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32955786
    586607 6ykc:A (1.2) BS03 OY5 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32955786
    586608 6ykd:A (1.86) BS01 OWB 2.7.11.1 GO:0004672 ... P11309 33448694
    586609 6yke:B (1.52) BS01 OUQ ? GO:0003723 ... Q96MU7 N/A
    586610 6ykf:A (1.48) BS01 dna N/A N/A N/A 33450012
    586611 6ykg:AAA (3.12) BS01 OZ8 2.7.1.137 GO:0016301 ... Q8NEB9 33783225
    586612 6ykh:A (1.1) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32955786
    586613 6ykh:A (1.1) BS02 OWK 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32955786
    586614 6yki:B (1.3) BS01 OUZ ? GO:0003723 ... Q96MU7 N/A
    586615 6ykj:A (1.6) BS01 OUW ? GO:0003723 ... Q96MU7 N/A
    586616 6ykj:B (1.6) BS01 OUW ? GO:0003723 ... Q96MU7 N/A
    586617 6ykk:A (2.236) BS01 OVK 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851 MOAD: Ki=30.94nM
    586618 6ykk:A (2.236) BS02 ZN 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851
    586619 6ykl:A (2.27) BS01 OVH 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851 MOAD: Ki=2.48nM
    586620 6ykl:A (2.27) BS02 ZN 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851
    586621 6ykn:A (2.63) BS01 OV8 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851
    586622 6ykn:A (2.63) BS02 ZN 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851
    586623 6yko:A (2.21) BS01 OW5 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851 MOAD: Ki=5.51nM
    586624 6yko:A (2.21) BS02 ZN 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851
    586625 6ykp:A (2.98) BS01 peptide ? GO:0005886 ... A0A0H3PAV1 32931735
    586626 6ykp:B (2.98) BS01 peptide ? GO:0005886 ... A0A0H3PAV1 32931735
    586627 6ykp:C (2.98) BS01 peptide ? GO:0005886 ... A0A0H3PAV1 32931735
    586628 6ykp:D (2.98) BS01 peptide ? GO:0005886 ... A0A0H3PAV1 32931735
    586629 6ykp:D (2.98) BS02 peptide ? GO:0005886 ... A0A0H3PAV1 32931735
    586630 6ykp:E (2.98) BS01 peptide ? GO:0005886 ... A0A0H3PAV1 32931735
    586631 6ykq:A (1.94) BS01 OVW 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851 MOAD: Ki=52.36nM
    586632 6ykq:A (1.94) BS02 ZN 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851
    586633 6ykr:A (3.0) BS01 peptide ? GO:0005886 ... A0A0H3PAV1 32931735
    586634 6ykr:B (3.0) BS01 peptide ? GO:0005886 ... A0A0H3PAV1 32931735
    586635 6ykr:C (3.0) BS01 peptide ? GO:0005886 ... A0A0H3PAV1 32931735
    586636 6ykr:D (3.0) BS01 peptide ? GO:0005886 ... A0A0H3PAV1 32931735
    586637 6ykr:D (3.0) BS02 peptide ? GO:0005886 ... A0A0H3PAV1 32931735
    586638 6ykr:E (3.0) BS01 peptide ? GO:0005886 ... A0A0H3PAV1 32931735
    586639 6yks:A (1.97) BS01 OVT 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851 MOAD: Ki=108.35nM
    586640 6yks:A (1.97) BS02 ZN 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851
    586641 6ykt:A (2.32) BS01 OVN 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851 MOAD: Ki=387.66nM
    586642 6ykt:A (2.32) BS02 ZN 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851
    586643 6yku:A (2.14) BS01 ZN 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851
    586644 6yku:A (2.14) BS02 OVB 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851 MOAD: Ki=17.83nM
    586645 6ykv:A (2.43) BS01 OVQ 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851 MOAD: Ki=31.62nM
    586646 6ykv:A (2.43) BS02 ZN 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851
    586647 6ykw:A (2.46) BS01 OVZ 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851 MOAD: Ki=1260.73nM
    586648 6ykw:A (2.46) BS02 ZN 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851
    586649 6ykx:A (2.41) BS01 OW2 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851 MOAD: Ki=182.35nM
    586650 6ykx:A (2.41) BS02 ZN 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851
    586651 6yky:A (2.52) BS01 OWQ 2.7.11.24 GO:0004672 ... Q16659 32927028
    586652 6yky:A (2.52) BS02 OWQ 2.7.11.24 GO:0004672 ... Q16659 32927028
    586653 6yky:B (2.52) BS01 OWQ 2.7.11.24 GO:0004672 ... Q16659 32927028
    586654 6yky:C (2.52) BS01 OWQ 2.7.11.24 GO:0004672 ... Q16659 32927028
    586655 6yky:D (2.52) BS01 OWQ 2.7.11.24 GO:0004672 ... Q16659 32927028
    586656 6ykz:A (1.2) BS01 OW8 ? GO:0003723 ... Q96MU7 N/A
    586657 6ykz:B (1.2) BS01 OW8 ? GO:0003723 ... Q96MU7 N/A
    586658 6yl0:A (1.2) BS01 OWH ? GO:0003723 ... Q96MU7 N/A
    586659 6yl0:B (1.2) BS01 OWH ? GO:0003723 ... Q96MU7 N/A
    586660 6yl0:B (1.2) BS02 OWH ? GO:0003723 ... Q96MU7 N/A
    586661 6yl1:A (1.66) BS01 OWN 2.7.11.22 GO:0000082 ... P24941 32659037
    586662 6yl2:A (3.15) BS01 dna ? GO:0000976 ... O06169 N/A
    586663 6yl2:A (3.15) BS02 dna ? GO:0000976 ... O06169 N/A
    586664 6yl2:B (3.15) BS01 dna ? GO:0000976 ... O06169 N/A
    586665 6yl2:B (3.15) BS02 dna ? GO:0000976 ... O06169 N/A
    586666 6yl4:A (2.001) BS01 OWW 3.1.3.76
    3.3.2.10
    GO:0003824 ... P34913 33044073 MOAD: ic50=0.007uM
    586667 6yl7:A (3.17) BS01 ZN 4.2.1.1 GO:0004089 ... A0A069AXA0 32408533
    586668 6yl8:A (1.5) BS01 OWZ ? GO:0003723 ... Q96MU7 N/A
    586669 6yl8:A (1.5) BS02 OWZ ? GO:0003723 ... Q96MU7 N/A
    586670 6yl8:B (1.5) BS01 OWZ ? GO:0003723 ... Q96MU7 N/A
    586671 6yl8:B (1.5) BS02 OWZ ? GO:0003723 ... Q96MU7 N/A
    586672 6yl9:B (1.5) BS01 OXB ? GO:0003723 ... Q96MU7 N/A
    586673 6ylc:A (2.43) BS01 OXW 2.7.11.24 GO:0004672 ... Q16659 32927028
    586674 6ylc:B (2.43) BS01 OXW 2.7.11.24 GO:0004672 ... Q16659 32927028
    586675 6ylc:C (2.43) BS01 OXW 2.7.11.24 GO:0004672 ... Q16659 32927028
    586676 6ylc:D (2.43) BS01 OXW 2.7.11.24 GO:0004672 ... Q16659 32927028
    586677 6yld:A (1.4) BS01 peptide ? GO:0042981 ... A0A369S2N9 32998881
    586678 6yld:C (1.4) BS01 peptide ? GO:0042981 ... A0A369S2N9 32998881
    586679 6yld:C (1.4) BS02 peptide ? GO:0042981 ... A0A369S2N9 32998881
    586680 6yle:B (3.3) BS01 peptide ? GO:0000027 ... P53877 32668200
    586681 6yle:C (3.3) BS01 peptide ? GO:0000027 ... P38883 32668200
    586682 6ylg:4 (3.0) BS01 rna 3.-.-.- GO:0000055 ... Q03862 32668200
    586683 6ylg:4 (3.0) BS02 rna 3.-.-.- GO:0000055 ... Q03862 32668200
    586684 6ylg:5 (3.0) BS01 rna ? GO:0003674 ... P53188 32668200
    586685 6ylg:A (3.0) BS01 rna ? GO:0002181 ... P0CX45 32668200
    586686 6ylg:B (3.0) BS01 rna ? GO:0000027 ... P14126 32668200
    586687 6ylg:C (3.0) BS01 rna ? GO:0002181 ... P10664 32668200
    586688 6ylg:C (3.0) BS02 rna ? GO:0002181 ... P10664 32668200
    586689 6ylg:D (3.0) BS01 rna ? GO:0000027 ... P26321 32668200
    586690 6ylg:D (3.0) BS02 rna ? GO:0000027 ... P26321 32668200
    586691 6ylg:E (3.0) BS01 rna ? GO:0000027 ... Q02326 32668200
    586692 6ylg:F (3.0) BS01 rna ? GO:0000463 ... P05737 32668200
    586693 6ylg:F (3.0) BS02 rna ? GO:0000463 ... P05737 32668200
    586694 6ylg:G (3.0) BS01 rna ? GO:0000470 ... P17076 32668200
    586695 6ylg:G (3.0) BS02 rna ? GO:0000470 ... P17076 32668200
    586696 6ylg:H (3.0) BS01 rna ? GO:0002181 ... P05738 32668200
    586697 6ylg:I (3.0) BS01 rna ? GO:0000055 ... Q08004 32668200
    586698 6ylg:I (3.0) BS02 ZN ? GO:0000055 ... Q08004 32668200
    586699 6ylg:J (3.0) BS01 rna ? GO:0000027 ... P0C0W9 32668200
    586700 6ylg:J (3.0) BS02 rna ? GO:0000027 ... P0C0W9 32668200
    586701 6ylg:K (3.0) BS01 rna ? GO:0000027 ... P38803 32668200
    586702 6ylg:L (3.0) BS01 rna ? GO:0002181 ... Q12690 32668200
    586703 6ylg:M (3.0) BS01 rna ? GO:0000027 ... P36105 32668200
    586704 6ylg:N (3.0) BS01 rna ? GO:0002181 ... P05748 32668200
    586705 6ylg:N (3.0) BS02 rna ? GO:0002181 ... P05748 32668200
    586706 6ylg:O (3.0) BS01 rna ? GO:0000470 ... P26784 32668200
    586707 6ylg:P (3.0) BS01 rna ? GO:0000448 ... P05740 32668200
    586708 6ylg:P (3.0) BS02 rna ? GO:0000448 ... P05740 32668200
    586709 6ylg:Q (3.0) BS01 rna ? GO:0002181 ... P0CX49 32668200
    586710 6ylg:R (3.0) BS01 rna ? GO:0002181 ... P0CX82 32668200
    586711 6ylg:S (3.0) BS01 rna ? GO:0002181 ... P0CX23 32668200
    586712 6ylg:S (3.0) BS02 rna ? GO:0002181 ... P0CX23 32668200
    586713 6ylg:T (3.0) BS01 rna ? GO:0002181 ... Q02753 32668200
    586714 6ylg:T (3.0) BS02 rna ? GO:0002181 ... Q02753 32668200
    586715 6ylg:U (3.0) BS01 rna ? GO:0002181 ... P05749 32668200
    586716 6ylg:V (3.0) BS01 rna ? GO:0002181 ... P0CX41 32668200
    586717 6ylg:W (3.0) BS01 rna ? GO:0000027 ... P33201 32668200
    586718 6ylg:X (3.0) BS01 rna ? GO:0000027 ... P04456 32668200
    586719 6ylg:X (3.0) BS02 rna ? GO:0000027 ... P04456 32668200
    586720 6ylg:Y (3.0) BS01 rna ? GO:0002181 ... P05743 32668200
    586721 6ylg:Y (3.0) BS02 rna ? GO:0002181 ... P05743 32668200
    586722 6ylg:Z (3.0) BS01 rna ? GO:0002181 ... P0C2H6 32668200
    586723 6ylg:a (3.0) BS01 rna ? GO:0002181 ... P02406 32668200
    586724 6ylg:b (3.0) BS01 rna ? GO:0000054 ... Q02892 32668200
    586725 6ylg:b (3.0) BS02 rna ? GO:0000054 ... Q02892 32668200
    586726 6ylg:b (3.0) BS03 GTP ? GO:0000054 ... Q02892 32668200
    586727 6ylg:c (3.0) BS01 rna ? GO:0003674 ... P47019 32668200
    586728 6ylg:c (3.0) BS02 rna ? GO:0003674 ... P47019 32668200
    586729 6ylg:d (3.0) BS01 rna ? GO:0002181 ... P0C2H8 32668200
    586730 6ylg:e (3.0) BS01 rna ? GO:0002181 ... P38061 32668200
    586731 6ylg:f (3.0) BS01 rna ? GO:0000027 ... P05744 32668200
    586732 6ylg:g (3.0) BS01 rna ? GO:0002181 ... P87262 32668200
    586733 6ylg:h (3.0) BS01 rna ? GO:0000463 ... P0CX84 32668200
    586734 6ylg:h (3.0) BS02 rna ? GO:0000463 ... P0CX84 32668200
    586735 6ylg:i (3.0) BS01 rna ? GO:0002181 ... P05745 32668200
    586736 6ylg:j (3.0) BS01 rna ? GO:0000448 ... P49166 32668200
    586737 6ylg:j (3.0) BS02 rna ? GO:0000448 ... P49166 32668200
    586738 6ylg:j (3.0) BS03 ZN ? GO:0000448 ... P49166 32668200
    586739 6ylg:k (3.0) BS01 rna ? GO:0002181 ... P49167 32668200
    586740 6ylg:l (3.0) BS01 rna ? GO:0002181 ... P04650 32668200
    586741 6ylg:l (3.0) BS02 rna ? GO:0002181 ... P04650 32668200
    586742 6ylg:m (3.0) BS01 rna ? GO:0000055 ... P53742 32668200
    586743 6ylg:m (3.0) BS02 GTP ? GO:0000055 ... P53742 32668200
    586744 6ylg:n (3.0) BS01 rna ? GO:0002181 ... P14120 32668200
    586745 6ylg:o (3.0) BS01 rna ? GO:0000055 ... P0CX43 32668200
    586746 6ylg:p (3.0) BS01 rna ? GO:0002181 ... P0CX25 32668200
    586747 6ylg:p (3.0) BS02 ZN ? GO:0002181 ... P0CX25 32668200
    586748 6ylg:q (3.0) BS01 rna ? GO:0000027 ... P0CX53 32668200
    586749 6ylg:r (3.0) BS01 rna ? GO:0000460 ... P40078 32668200
    586750 6ylg:s (3.0) BS01 rna ? GO:0000055 ... P40010 32668200
    586751 6ylg:t (3.0) BS01 rna ? GO:0000055 ... P53313 32668200
    586752 6ylg:u (3.0) BS01 rna ? GO:0001671 ... Q07915 32668200
    586753 6ylg:u (3.0) BS02 ZN ? GO:0001671 ... Q07915 32668200
    586754 6ylg:x (3.0) BS01 rna ? GO:0000027 ... P25382 32668200
    586755 6ylg:y (3.0) BS01 rna ? GO:0000054 ... Q12522 32668200
    586756 6ylg:z (3.0) BS01 rna ? GO:0003674 ... P38202 32668200
    586757 6ylh:4 (3.1) BS01 rna 3.-.-.- GO:0000055 ... Q03862 32668200
    586758 6ylh:4 (3.1) BS02 rna 3.-.-.- GO:0000055 ... Q03862 32668200
    586759 6ylh:5 (3.1) BS01 rna ? GO:0003674 ... P53188 32668200
    586760 6ylh:7 (3.1) BS01 rna ? GO:0000027 ... P38883 32668200
    586761 6ylh:A (3.1) BS01 rna ? GO:0002181 ... P0CX45 32668200
    586762 6ylh:B (3.1) BS01 rna ? GO:0000027 ... P14126 32668200
    586763 6ylh:C (3.1) BS01 rna ? GO:0002181 ... P10664 32668200
    586764 6ylh:C (3.1) BS02 rna ? GO:0002181 ... P10664 32668200
    586765 6ylh:D (3.1) BS01 rna ? GO:0000027 ... P26321 32668200
    586766 6ylh:D (3.1) BS02 rna ? GO:0000027 ... P26321 32668200
    586767 6ylh:E (3.1) BS01 rna ? GO:0000027 ... Q02326 32668200
    586768 6ylh:F (3.1) BS01 rna ? GO:0000463 ... P05737 32668200
    586769 6ylh:F (3.1) BS02 rna ? GO:0000463 ... P05737 32668200
    586770 6ylh:G (3.1) BS01 rna ? GO:0000470 ... P17076 32668200
    586771 6ylh:G (3.1) BS02 rna ? GO:0000470 ... P17076 32668200
    586772 6ylh:H (3.1) BS01 rna ? GO:0002181 ... P05738 32668200
    586773 6ylh:I (3.1) BS01 rna ? GO:0000055 ... Q08004 32668200
    586774 6ylh:I (3.1) BS02 ZN ? GO:0000055 ... Q08004 32668200
    586775 6ylh:J (3.1) BS01 rna ? GO:0000027 ... P0C0W9 32668200
    586776 6ylh:J (3.1) BS02 rna ? GO:0000027 ... P0C0W9 32668200
    586777 6ylh:K (3.1) BS01 rna ? GO:0000027 ... P38803 32668200
    586778 6ylh:L (3.1) BS01 rna ? GO:0002181 ... Q12690 32668200
    586779 6ylh:M (3.1) BS01 rna ? GO:0000027 ... P36105 32668200
    586780 6ylh:N (3.1) BS01 rna ? GO:0002181 ... P05748 32668200
    586781 6ylh:N (3.1) BS02 rna ? GO:0002181 ... P05748 32668200
    586782 6ylh:O (3.1) BS01 rna ? GO:0000470 ... P26784 32668200
    586783 6ylh:P (3.1) BS01 rna ? GO:0000448 ... P05740 32668200
    586784 6ylh:P (3.1) BS02 rna ? GO:0000448 ... P05740 32668200
    586785 6ylh:Q (3.1) BS01 rna ? GO:0002181 ... P0CX49 32668200
    586786 6ylh:R (3.1) BS01 rna ? GO:0002181 ... P0CX82 32668200
    586787 6ylh:S (3.1) BS01 rna ? GO:0002181 ... P0CX23 32668200
    586788 6ylh:S (3.1) BS02 rna ? GO:0002181 ... P0CX23 32668200
    586789 6ylh:T (3.1) BS01 rna ? GO:0002181 ... Q02753 32668200
    586790 6ylh:T (3.1) BS02 rna ? GO:0002181 ... Q02753 32668200
    586791 6ylh:U (3.1) BS01 rna ? GO:0002181 ... P05749 32668200
    586792 6ylh:V (3.1) BS01 rna ? GO:0002181 ... P0CX41 32668200
    586793 6ylh:W (3.1) BS01 rna ? GO:0000027 ... P33201 32668200
    586794 6ylh:X (3.1) BS01 rna ? GO:0000027 ... P04456 32668200
    586795 6ylh:X (3.1) BS02 rna ? GO:0000027 ... P04456 32668200
    586796 6ylh:Y (3.1) BS01 rna ? GO:0002181 ... P05743 32668200
    586797 6ylh:Y (3.1) BS02 rna ? GO:0002181 ... P05743 32668200
    586798 6ylh:Z (3.1) BS01 rna ? GO:0002181 ... P0C2H6 32668200
    586799 6ylh:a (3.1) BS01 rna ? GO:0002181 ... P02406 32668200
    586800 6ylh:b (3.1) BS01 rna ? GO:0000054 ... Q02892 32668200

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).