SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    58801 1vy4:BD (2.6) BS02 rna ? GO:0002181 ... P60405 25132179
    58802 1vy4:BD (2.6) BS03 MG ? GO:0002181 ... P60405 25132179
    58803 1vy4:BD (2.6) BS04 MG ? GO:0002181 ... P60405 25132179
    58804 1vy4:BD (2.6) BS05 MG ? GO:0002181 ... P60405 25132179
    58805 1vy4:BD (2.6) BS06 MG ? GO:0002181 ... P60405 25132179
    58806 1vy4:BD (2.6) BS07 MG ? GO:0002181 ... P60405 25132179
    58807 1vy4:BD (2.6) BS08 MG ? GO:0002181 ... P60405 25132179
    58808 1vy4:BD (2.6) BS09 MG ? GO:0002181 ... P60405 25132179
    58809 1vy4:BD (2.6) BS10 MG ? GO:0002181 ... P60405 25132179
    58810 1vy4:BD (2.6) BS11 MG ? GO:0002181 ... P60405 25132179
    58811 1vy4:BD (2.6) BS12 MG ? GO:0002181 ... P60405 25132179
    58812 1vy4:BD (2.6) BS13 MG ? GO:0002181 ... P60405 25132179
    58813 1vy4:BE (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 25132179
    58814 1vy4:BE (2.6) BS02 MG ? GO:0003735 ... Q5SHN8 25132179
    58815 1vy4:BF (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 25132179
    58816 1vy4:BF (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 25132179
    58817 1vy4:BF (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 25132179
    58818 1vy4:BF (2.6) BS04 MG ? GO:0003735 ... Q5SHN9 25132179
    58819 1vy4:BF (2.6) BS05 MG ? GO:0003735 ... Q5SHN9 25132179
    58820 1vy4:BF (2.6) BS06 MG ? GO:0003735 ... Q5SHN9 25132179
    58821 1vy4:BF (2.6) BS07 MG ? GO:0003735 ... Q5SHN9 25132179
    58822 1vy4:BF (2.6) BS08 MG ? GO:0003735 ... Q5SHN9 25132179
    58823 1vy4:BF (2.6) BS09 MG ? GO:0003735 ... Q5SHN9 25132179
    58824 1vy4:BG (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 25132179
    58825 1vy4:BG (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 25132179
    58826 1vy4:BG (2.6) BS03 rna ? GO:0000049 ... Q5SHQ0 25132179
    58827 1vy4:BG (2.6) BS04 MG ? GO:0000049 ... Q5SHQ0 25132179
    58828 1vy4:BG (2.6) BS05 MG ? GO:0000049 ... Q5SHQ0 25132179
    58829 1vy4:BH (2.6) BS01 rna ? GO:0002181 ... P0DOY8 25132179
    58830 1vy4:BH (2.6) BS02 MG ? GO:0002181 ... P0DOY8 25132179
    58831 1vy4:BI (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 25132179
    58832 1vy4:BN (2.6) BS01 rna ? GO:0003729 ... P60488 25132179
    58833 1vy4:BN (2.6) BS02 MG ? GO:0003729 ... P60488 25132179
    58834 1vy4:BO (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 25132179
    58835 1vy4:BO (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 25132179
    58836 1vy4:BP (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 25132179
    58837 1vy4:BP (2.6) BS02 MG ? GO:0003735 ... Q5SHQ7 25132179
    58838 1vy4:BP (2.6) BS03 MG ? GO:0003735 ... Q5SHQ7 25132179
    58839 1vy4:BQ (2.6) BS01 rna ? GO:0003735 ... P60489 25132179
    58840 1vy4:BQ (2.6) BS02 rna ? GO:0003735 ... P60489 25132179
    58841 1vy4:BQ (2.6) BS03 rna ? GO:0003735 ... P60489 25132179
    58842 1vy4:BQ (2.6) BS04 MG ? GO:0003735 ... P60489 25132179
    58843 1vy4:BQ (2.6) BS05 MG ? GO:0003735 ... P60489 25132179
    58844 1vy4:BR (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 25132179
    58845 1vy4:BR (2.6) BS02 MG ? GO:0003735 ... Q9Z9H5 25132179
    58846 1vy4:BR (2.6) BS03 MG ? GO:0003735 ... Q9Z9H5 25132179
    58847 1vy4:BS (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 25132179
    58848 1vy4:BS (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 25132179
    58849 1vy4:BT (2.6) BS01 rna ? GO:0003735 ... P60490 25132179
    58850 1vy4:BT (2.6) BS02 rna ? GO:0003735 ... P60490 25132179
    58851 1vy4:BU (2.6) BS01 rna ? GO:0000027 ... P60491 25132179
    58852 1vy4:BU (2.6) BS02 MG ? GO:0000027 ... P60491 25132179
    58853 1vy4:BU (2.6) BS03 MG ? GO:0000027 ... P60491 25132179
    58854 1vy4:BU (2.6) BS04 MG ? GO:0000027 ... P60491 25132179
    58855 1vy4:BU (2.6) BS05 MG ? GO:0000027 ... P60491 25132179
    58856 1vy4:BU (2.6) BS06 MG ? GO:0000027 ... P60491 25132179
    58857 1vy4:BV (2.6) BS01 rna ? GO:0003723 ... P60492 25132179
    58858 1vy4:BV (2.6) BS02 MG ? GO:0003723 ... P60492 25132179
    58859 1vy4:BV (2.6) BS03 MG ? GO:0003723 ... P60492 25132179
    58860 1vy4:BV (2.6) BS04 MG ? GO:0003723 ... P60492 25132179
    58861 1vy4:BV (2.6) BS05 MG ? GO:0003723 ... P60492 25132179
    58862 1vy4:BW (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 25132179
    58863 1vy4:BW (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 25132179
    58864 1vy4:BX (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 25132179
    58865 1vy4:BX (2.6) BS02 MG ? GO:0003735 ... Q5SHP0 25132179
    58866 1vy4:BY (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 25132179
    58867 1vy4:BY (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 25132179
    58868 1vy4:BZ (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 25132179
    58869 1vy4:BZ (2.6) BS02 rna ? GO:0003723 ... Q5SHZ1 25132179
    58870 1vy4:CB (2.6) BS01 rna ? GO:0003735 ... P80371 25132179
    58871 1vy4:CC (2.6) BS01 rna ? GO:0003676 ... P80372 25132179
    58872 1vy4:CD (2.6) BS01 rna ? GO:0003723 ... P80373 25132179
    58873 1vy4:CD (2.6) BS02 SF4 ? GO:0003723 ... P80373 25132179
    58874 1vy4:CE (2.6) BS01 rna ? GO:0003723 ... Q5SHQ5 25132179
    58875 1vy4:CE (2.6) BS02 MG ? GO:0003723 ... Q5SHQ5 25132179
    58876 1vy4:CF (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 25132179
    58877 1vy4:CF (2.6) BS02 MG ? GO:0003735 ... Q5SLP8 25132179
    58878 1vy4:CG (2.6) BS01 rna ? GO:0000049 ... P17291 25132179
    58879 1vy4:CG (2.6) BS02 rna ? GO:0000049 ... P17291 25132179
    58880 1vy4:CH (2.6) BS01 rna ? GO:0003735 ... P0DOY9 25132179
    58881 1vy4:CI (2.6) BS01 rna ? GO:0003723 ... P80374 25132179
    58882 1vy4:CI (2.6) BS02 rna ? GO:0003723 ... P80374 25132179
    58883 1vy4:CJ (2.6) BS01 rna ? GO:0000049 ... Q5SHN7 25132179
    58884 1vy4:CJ (2.6) BS02 MG ? GO:0000049 ... Q5SHN7 25132179
    58885 1vy4:CK (2.6) BS01 rna ? GO:0003735 ... P80376 25132179
    58886 1vy4:CL (2.6) BS01 rna ? GO:0000049 ... Q5SHN3 25132179
    58887 1vy4:CL (2.6) BS02 MG ? GO:0000049 ... Q5SHN3 25132179
    58888 1vy4:CM (2.6) BS01 rna ? GO:0000049 ... P80377 25132179
    58889 1vy4:CM (2.6) BS02 rna ? GO:0000049 ... P80377 25132179
    58890 1vy4:CM (2.6) BS03 rna ? GO:0000049 ... P80377 25132179
    58891 1vy4:CN (2.6) BS01 rna ? GO:0003735 ... P0DOY6 25132179
    58892 1vy4:CN (2.6) BS02 ZN ? GO:0003735 ... P0DOY6 25132179
    58893 1vy4:CO (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 25132179
    58894 1vy4:CO (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 25132179
    58895 1vy4:CP (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 25132179
    58896 1vy4:CQ (2.6) BS01 rna ? GO:0003735 ... P0DOY7 25132179
    58897 1vy4:CR (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 25132179
    58898 1vy4:CS (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 25132179
    58899 1vy4:CT (2.6) BS01 rna ? GO:0003723 ... P80380 25132179
    58900 1vy4:CT (2.6) BS02 MG ? GO:0003723 ... P80380 25132179
    58901 1vy4:D0 (2.6) BS01 rna ? GO:0003735 ... P60493 25132179
    58902 1vy4:D0 (2.6) BS02 rna ? GO:0003735 ... P60493 25132179
    58903 1vy4:D1 (2.6) BS01 rna ? GO:0003735 ... P60494 25132179
    58904 1vy4:D1 (2.6) BS02 rna ? GO:0003735 ... P60494 25132179
    58905 1vy4:D2 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 25132179
    58906 1vy4:D3 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 25132179
    58907 1vy4:D3 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 25132179
    58908 1vy4:D3 (2.6) BS03 MG ? GO:0003735 ... Q5SHQ6 25132179
    58909 1vy4:D4 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 25132179
    58910 1vy4:D4 (2.6) BS02 ZN ? GO:0003735 ... Q5SJE1 25132179
    58911 1vy4:D5 (2.6) BS01 rna ? GO:0003735 ... P80339 25132179
    58912 1vy4:D5 (2.6) BS02 ZN ? GO:0003735 ... P80339 25132179
    58913 1vy4:D6 (2.6) BS01 rna ? GO:0003735 ... P35871 25132179
    58914 1vy4:D6 (2.6) BS02 ZN ? GO:0003735 ... P35871 25132179
    58915 1vy4:D7 (2.6) BS01 rna ? GO:0003735 ... P80340 25132179
    58916 1vy4:D8 (2.6) BS01 rna ? GO:0003735 ... Q5SKU1 25132179
    58917 1vy4:D9 (2.6) BS01 rna ? GO:0003735 ... Q5SHR2 25132179
    58918 1vy4:D9 (2.6) BS02 ZN ? GO:0003735 ... Q5SHR2 25132179
    58919 1vy4:DD (2.6) BS01 rna ? GO:0002181 ... P60405 25132179
    58920 1vy4:DD (2.6) BS02 rna ? GO:0002181 ... P60405 25132179
    58921 1vy4:DD (2.6) BS03 MG ? GO:0002181 ... P60405 25132179
    58922 1vy4:DD (2.6) BS04 MG ? GO:0002181 ... P60405 25132179
    58923 1vy4:DD (2.6) BS05 MG ? GO:0002181 ... P60405 25132179
    58924 1vy4:DE (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 25132179
    58925 1vy4:DE (2.6) BS02 MG ? GO:0003735 ... Q5SHN8 25132179
    58926 1vy4:DE (2.6) BS03 MG ? GO:0003735 ... Q5SHN8 25132179
    58927 1vy4:DF (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 25132179
    58928 1vy4:DF (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 25132179
    58929 1vy4:DF (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 25132179
    58930 1vy4:DG (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 25132179
    58931 1vy4:DG (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 25132179
    58932 1vy4:DG (2.6) BS03 rna ? GO:0000049 ... Q5SHQ0 25132179
    58933 1vy4:DG (2.6) BS04 MG ? GO:0000049 ... Q5SHQ0 25132179
    58934 1vy4:DH (2.6) BS01 rna ? GO:0002181 ... P0DOY8 25132179
    58935 1vy4:DI (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 25132179
    58936 1vy4:DN (2.6) BS01 rna ? GO:0003729 ... P60488 25132179
    58937 1vy4:DO (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 25132179
    58938 1vy4:DO (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 25132179
    58939 1vy4:DP (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 25132179
    58940 1vy4:DQ (2.6) BS01 rna ? GO:0003735 ... P60489 25132179
    58941 1vy4:DQ (2.6) BS02 rna ? GO:0003735 ... P60489 25132179
    58942 1vy4:DQ (2.6) BS03 rna ? GO:0003735 ... P60489 25132179
    58943 1vy4:DQ (2.6) BS04 MG ? GO:0003735 ... P60489 25132179
    58944 1vy4:DQ (2.6) BS05 MG ? GO:0003735 ... P60489 25132179
    58945 1vy4:DR (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 25132179
    58946 1vy4:DS (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 25132179
    58947 1vy4:DS (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 25132179
    58948 1vy4:DT (2.6) BS01 rna ? GO:0003735 ... P60490 25132179
    58949 1vy4:DT (2.6) BS02 rna ? GO:0003735 ... P60490 25132179
    58950 1vy4:DU (2.6) BS01 rna ? GO:0000027 ... P60491 25132179
    58951 1vy4:DU (2.6) BS02 MG ? GO:0000027 ... P60491 25132179
    58952 1vy4:DU (2.6) BS03 MG ? GO:0000027 ... P60491 25132179
    58953 1vy4:DV (2.6) BS01 rna ? GO:0003723 ... P60492 25132179
    58954 1vy4:DV (2.6) BS02 MG ? GO:0003723 ... P60492 25132179
    58955 1vy4:DV (2.6) BS03 MG ? GO:0003723 ... P60492 25132179
    58956 1vy4:DW (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 25132179
    58957 1vy4:DW (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 25132179
    58958 1vy4:DX (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 25132179
    58959 1vy4:DY (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 25132179
    58960 1vy4:DY (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 25132179
    58961 1vy4:DZ (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 25132179
    58962 1vy4:DZ (2.6) BS02 rna ? GO:0003723 ... Q5SHZ1 25132179
    58963 1vy5:AB (2.55) BS01 rna ? GO:0003735 ... P80371 25132179
    58964 1vy5:AC (2.55) BS01 rna ? GO:0003676 ... P80372 25132179
    58965 1vy5:AD (2.55) BS01 rna ? GO:0003723 ... P80373 25132179
    58966 1vy5:AD (2.55) BS02 SF4 ? GO:0003723 ... P80373 25132179
    58967 1vy5:AE (2.55) BS01 rna ? GO:0003723 ... Q5SHQ5 25132179
    58968 1vy5:AE (2.55) BS02 MG ? GO:0003723 ... Q5SHQ5 25132179
    58969 1vy5:AE (2.55) BS03 MG ? GO:0003723 ... Q5SHQ5 25132179
    58970 1vy5:AF (2.55) BS01 rna ? GO:0003735 ... Q5SLP8 25132179
    58971 1vy5:AG (2.55) BS01 rna ? GO:0000049 ... P17291 25132179
    58972 1vy5:AG (2.55) BS02 rna ? GO:0000049 ... P17291 25132179
    58973 1vy5:AH (2.55) BS01 rna ? GO:0003735 ... P0DOY9 25132179
    58974 1vy5:AI (2.55) BS01 rna ? GO:0003723 ... P80374 25132179
    58975 1vy5:AI (2.55) BS02 rna ? GO:0003723 ... P80374 25132179
    58976 1vy5:AJ (2.55) BS01 rna ? GO:0000049 ... Q5SHN7 25132179
    58977 1vy5:AK (2.55) BS01 rna ? GO:0003735 ... P80376 25132179
    58978 1vy5:AK (2.55) BS02 MG ? GO:0003735 ... P80376 25132179
    58979 1vy5:AL (2.55) BS01 rna ? GO:0000049 ... Q5SHN3 25132179
    58980 1vy5:AL (2.55) BS02 MG ? GO:0000049 ... Q5SHN3 25132179
    58981 1vy5:AM (2.55) BS01 rna ? GO:0000049 ... P80377 25132179
    58982 1vy5:AM (2.55) BS02 rna ? GO:0000049 ... P80377 25132179
    58983 1vy5:AM (2.55) BS03 rna ? GO:0000049 ... P80377 25132179
    58984 1vy5:AM (2.55) BS04 MG ? GO:0000049 ... P80377 25132179
    58985 1vy5:AN (2.55) BS01 rna ? GO:0003735 ... P0DOY6 25132179
    58986 1vy5:AN (2.55) BS02 ZN ? GO:0003735 ... P0DOY6 25132179
    58987 1vy5:AO (2.55) BS01 rna ? GO:0003735 ... Q5SJ76 25132179
    58988 1vy5:AO (2.55) BS02 rna ? GO:0003735 ... Q5SJ76 25132179
    58989 1vy5:AP (2.55) BS01 rna ? GO:0003735 ... Q5SJH3 25132179
    58990 1vy5:AQ (2.55) BS01 rna ? GO:0003735 ... P0DOY7 25132179
    58991 1vy5:AR (2.55) BS01 rna ? GO:0003735 ... Q5SLQ0 25132179
    58992 1vy5:AS (2.55) BS01 rna ? GO:0000028 ... Q5SHP2 25132179
    58993 1vy5:AT (2.55) BS01 rna ? GO:0003723 ... P80380 25132179
    58994 1vy5:B0 (2.55) BS01 rna ? GO:0003735 ... P60493 25132179
    58995 1vy5:B0 (2.55) BS02 rna ? GO:0003735 ... P60493 25132179
    58996 1vy5:B0 (2.55) BS03 MG ? GO:0003735 ... P60493 25132179
    58997 1vy5:B1 (2.55) BS01 rna ? GO:0003735 ... P60494 25132179
    58998 1vy5:B1 (2.55) BS02 rna ? GO:0003735 ... P60494 25132179
    58999 1vy5:B1 (2.55) BS03 MG ? GO:0003735 ... P60494 25132179
    59000 1vy5:B2 (2.55) BS01 rna ? GO:0003735 ... Q5SHP6 25132179

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).