SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    590601 6z6j:Sa (3.4) BS02 ZN ? GO:0000054 ... P39939 32687489
    590602 6z6j:Sb (3.4) BS01 rna ? GO:0000028 ... P35997 32687489
    590603 6z6j:Sb (3.4) BS02 ZN ? GO:0000028 ... P35997 32687489
    590604 6z6j:Sc (3.4) BS01 rna ? GO:0000028 ... Q3E7X9 32687489
    590605 6z6j:Sd (3.4) BS01 rna ? GO:0002181 ... P41057 32687489
    590606 6z6j:Se (3.4) BS01 rna ? GO:0002181 ... P0CX33 32687489
    590607 6z6j:Sf (3.4) BS01 rna ? GO:0000028 ... P05759 32687489
    590608 6z6j:Sg (3.4) BS01 rna ? GO:0001965 ... P38011 32687489
    590609 6z6k:C5 (3.4) BS01 rna ? GO:0002182 ... Q3E772 32687489
    590610 6z6k:C5 (3.4) BS02 rna ? GO:0002182 ... Q3E772 32687489
    590611 6z6k:LA (3.4) BS01 rna ? GO:0002181 ... P0CX45 32687489
    590612 6z6k:LA (3.4) BS02 rna ? GO:0002181 ... P0CX45 32687489
    590613 6z6k:LB (3.4) BS01 rna ? GO:0000027 ... P14126 32687489
    590614 6z6k:LC (3.4) BS01 rna ? GO:0002181 ... P10664 32687489
    590615 6z6k:LC (3.4) BS02 rna ? GO:0002181 ... P10664 32687489
    590616 6z6k:LD (3.4) BS01 rna ? GO:0000027 ... P26321 32687489
    590617 6z6k:LD (3.4) BS02 rna ? GO:0000027 ... P26321 32687489
    590618 6z6k:LE (3.4) BS01 rna ? GO:0000027 ... Q02326 32687489
    590619 6z6k:LF (3.4) BS01 rna ? GO:0000463 ... P05737 32687489
    590620 6z6k:LF (3.4) BS02 rna ? GO:0000463 ... P05737 32687489
    590621 6z6k:LG (3.4) BS01 rna ? GO:0000470 ... P17076 32687489
    590622 6z6k:LG (3.4) BS02 rna ? GO:0000470 ... P17076 32687489
    590623 6z6k:LH (3.4) BS01 rna ? GO:0002181 ... P05738 32687489
    590624 6z6k:LI (3.4) BS01 rna ? GO:0000027 ... P41805 32687489
    590625 6z6k:LI (3.4) BS02 rna ? GO:0000027 ... P41805 32687489
    590626 6z6k:LJ (3.4) BS01 rna ? GO:0000027 ... P0C0W9 32687489
    590627 6z6k:LJ (3.4) BS02 rna ? GO:0000027 ... P0C0W9 32687489
    590628 6z6k:LL (3.4) BS01 rna ? GO:0002181 ... Q12690 32687489
    590629 6z6k:LM (3.4) BS01 rna ? GO:0000027 ... P36105 32687489
    590630 6z6k:LN (3.4) BS01 rna ? GO:0002181 ... P05748 32687489
    590631 6z6k:LN (3.4) BS02 rna ? GO:0002181 ... P05748 32687489
    590632 6z6k:LO (3.4) BS01 rna ? GO:0000470 ... P26784 32687489
    590633 6z6k:LP (3.4) BS01 rna ? GO:0000448 ... P05740 32687489
    590634 6z6k:LP (3.4) BS02 rna ? GO:0000448 ... P05740 32687489
    590635 6z6k:LQ (3.4) BS01 rna ? GO:0002181 ... P0CX49 32687489
    590636 6z6k:LR (3.4) BS01 rna ? GO:0002181 ... P0CX82 32687489
    590637 6z6k:LR (3.4) BS02 rna ? GO:0002181 ... P0CX82 32687489
    590638 6z6k:LS (3.4) BS01 rna ? GO:0002181 ... P0CX23 32687489
    590639 6z6k:LS (3.4) BS02 rna ? GO:0002181 ... P0CX23 32687489
    590640 6z6k:LT (3.4) BS01 rna ? GO:0002181 ... Q02753 32687489
    590641 6z6k:LT (3.4) BS02 rna ? GO:0002181 ... Q02753 32687489
    590642 6z6k:LU (3.4) BS01 rna ? GO:0002181 ... P05749 32687489
    590643 6z6k:LV (3.4) BS01 rna ? GO:0002181 ... P0CX41 32687489
    590644 6z6k:LV (3.4) BS02 rna ? GO:0002181 ... P0CX41 32687489
    590645 6z6k:LW (3.4) BS01 rna ? GO:0002181 ... P04449 32687489
    590646 6z6k:LX (3.4) BS01 rna ? GO:0000027 ... P04456 32687489
    590647 6z6k:LX (3.4) BS02 rna ? GO:0000027 ... P04456 32687489
    590648 6z6k:LY (3.4) BS01 rna ? GO:0002181 ... P05743 32687489
    590649 6z6k:LY (3.4) BS02 rna ? GO:0002181 ... P05743 32687489
    590650 6z6k:LZ (3.4) BS01 rna ? GO:0002181 ... P0C2H6 32687489
    590651 6z6k:La (3.4) BS01 rna ? GO:0002181 ... P02406 32687489
    590652 6z6k:Lb (3.4) BS01 rna ? GO:0002181 ... P05747 32687489
    590653 6z6k:Lc (3.4) BS01 rna ? GO:0002181 ... P14120 32687489
    590654 6z6k:Ld (3.4) BS01 rna ? GO:0002181 ... P0C2H8 32687489
    590655 6z6k:Le (3.4) BS01 rna ? GO:0002181 ... P38061 32687489
    590656 6z6k:Lf (3.4) BS01 rna ? GO:0000027 ... P05744 32687489
    590657 6z6k:Lg (3.4) BS01 rna ? GO:0002181 ... P87262 32687489
    590658 6z6k:Lg (3.4) BS02 ZN ? GO:0002181 ... P87262 32687489
    590659 6z6k:Lh (3.4) BS01 rna ? GO:0000463 ... P0CX84 32687489
    590660 6z6k:Lh (3.4) BS02 rna ? GO:0000463 ... P0CX84 32687489
    590661 6z6k:Li (3.4) BS01 rna ? GO:0002181 ... P05745 32687489
    590662 6z6k:Lj (3.4) BS01 rna ? GO:0000448 ... P49166 32687489
    590663 6z6k:Lj (3.4) BS02 rna ? GO:0000448 ... P49166 32687489
    590664 6z6k:Lj (3.4) BS03 ZN ? GO:0000448 ... P49166 32687489
    590665 6z6k:Lk (3.4) BS01 rna ? GO:0002181 ... P49167 32687489
    590666 6z6k:Ll (3.4) BS01 rna ? GO:0002181 ... P04650 32687489
    590667 6z6k:Ll (3.4) BS02 rna ? GO:0002181 ... P04650 32687489
    590668 6z6k:Lm (3.4) BS01 rna ? GO:0000027 ... P0CH08 32687489
    590669 6z6k:Lm (3.4) BS02 ZN ? GO:0000027 ... P0CH08 32687489
    590670 6z6k:Lo (3.4) BS01 rna ? GO:0002181 ... P0CX27 32687489
    590671 6z6k:Lo (3.4) BS02 ZN ? GO:0002181 ... P0CX27 32687489
    590672 6z6k:Lp (3.4) BS01 rna ? GO:0002181 ... P0CX25 32687489
    590673 6z6k:Lp (3.4) BS02 ZN ? GO:0002181 ... P0CX25 32687489
    590674 6z6k:SA (3.4) BS01 rna ? GO:0000028 ... P32905 32687489
    590675 6z6k:SB (3.4) BS01 rna ? GO:0000462 ... P33442 32687489
    590676 6z6k:SC (3.4) BS01 rna ? GO:0000054 ... P25443 32687489
    590677 6z6k:SD (3.4) BS01 rna ? GO:0000054 ... P05750 32687489
    590678 6z6k:SE (3.4) BS01 rna ? GO:0002181 ... P0CX35 32687489
    590679 6z6k:SF (3.4) BS01 rna ? GO:0003723 ... A0A1L4AA68 32687489
    590680 6z6k:SG (3.4) BS01 rna ? GO:0000462 ... P0CX37 32687489
    590681 6z6k:SH (3.4) BS01 rna ? GO:0002181 ... P26786 32687489
    590682 6z6k:SI (3.4) BS01 rna ? GO:0000462 ... P0CX39 32687489
    590683 6z6k:SI (3.4) BS02 rna ? GO:0000462 ... P0CX39 32687489
    590684 6z6k:SJ (3.4) BS01 rna ? GO:0000462 ... O13516 32687489
    590685 6z6k:SK (3.4) BS01 rna ? GO:0000054 ... Q08745 32687489
    590686 6z6k:SL (3.4) BS01 rna ? GO:0000028 ... P0CX47 32687489
    590687 6z6k:SM (3.4) BS01 rna ? GO:0000028 ... P48589 32687489
    590688 6z6k:SN (3.4) BS01 rna ? GO:0000462 ... P05756 32687489
    590689 6z6k:SN (3.4) BS02 rna ? GO:0000462 ... P05756 32687489
    590690 6z6k:SO (3.4) BS01 rna ? GO:0000028 ... P06367 32687489
    590691 6z6k:SP (3.4) BS01 rna ? GO:0000028 ... Q01855 32687489
    590692 6z6k:SQ (3.4) BS01 rna ? GO:0000462 ... P0CX51 32687489
    590693 6z6k:SR (3.4) BS01 rna ? GO:0000028 ... P02407 32687489
    590694 6z6k:SS (3.4) BS01 rna ? GO:0000054 ... P0CX55 32687489
    590695 6z6k:ST (3.4) BS01 rna ? GO:0000028 ... P07280 32687489
    590696 6z6k:SU (3.4) BS01 rna ? GO:0000462 ... P38701 32687489
    590697 6z6k:SV (3.4) BS01 rna ? GO:0000447 ... P0C0V8 32687489
    590698 6z6k:SW (3.4) BS01 rna ? GO:0002181 ... P0C0W1 32687489
    590699 6z6k:SX (3.4) BS01 rna ? GO:0000462 ... P0CX29 32687489
    590700 6z6k:SY (3.4) BS01 rna ? GO:0000462 ... P0CX31 32687489
    590701 6z6k:SZ (3.4) BS01 rna ? GO:0002181 ... Q3E792 32687489
    590702 6z6k:Sa (3.4) BS01 rna ? GO:0000054 ... P39939 32687489
    590703 6z6k:Sa (3.4) BS02 ZN ? GO:0000054 ... P39939 32687489
    590704 6z6k:Sb (3.4) BS01 rna ? GO:0000028 ... P35997 32687489
    590705 6z6k:Sb (3.4) BS02 ZN ? GO:0000028 ... P35997 32687489
    590706 6z6k:Sc (3.4) BS01 rna ? GO:0000028 ... Q3E7X9 32687489
    590707 6z6k:Sd (3.4) BS01 rna ? GO:0002181 ... P41057 32687489
    590708 6z6k:Se (3.4) BS01 rna ? GO:0002181 ... P0CX33 32687489
    590709 6z6k:Sf (3.4) BS01 rna ? GO:0000028 ... P05759 32687489
    590710 6z6k:Sf (3.4) BS02 ZN ? GO:0000028 ... P05759 32687489
    590711 6z6k:Sg (3.4) BS01 rna ? GO:0001965 ... P38011 32687489
    590712 6z6l:CA (3.0) BS01 rna ? GO:0003676 ... Q9UQ80 32687489
    590713 6z6l:CE (3.0) BS01 rna ? GO:0003713 ... Q96CT7 32687489
    590714 6z6l:CE (3.0) BS02 rna ? GO:0003713 ... Q96CT7 32687489
    590715 6z6l:LA (3.0) BS01 rna ? GO:0002181 ... P62917 32687489
    590716 6z6l:LA (3.0) BS02 MG ? GO:0002181 ... P62917 32687489
    590717 6z6l:LB (3.0) BS01 rna ? GO:0002181 ... P39023 32687489
    590718 6z6l:LC (3.0) BS01 rna ? GO:0002181 ... P36578 32687489
    590719 6z6l:LC (3.0) BS02 rna ? GO:0002181 ... P36578 32687489
    590720 6z6l:LD (3.0) BS01 rna ? GO:0000027 ... P46777 32687489
    590721 6z6l:LD (3.0) BS02 rna ? GO:0000027 ... P46777 32687489
    590722 6z6l:LE (3.0) BS01 rna ? GO:0002181 ... Q02878 32687489
    590723 6z6l:LF (3.0) BS01 rna ? GO:0000463 ... P18124 32687489
    590724 6z6l:LF (3.0) BS02 rna ? GO:0000463 ... P18124 32687489
    590725 6z6l:LG (3.0) BS01 rna ? GO:0000470 ... P62424 32687489
    590726 6z6l:LG (3.0) BS02 rna ? GO:0000470 ... P62424 32687489
    590727 6z6l:LH (3.0) BS01 rna ? GO:0002181 ... P32969 32687489
    590728 6z6l:LI (3.0) BS01 rna ? GO:0000027 ... Q96L21 32687489
    590729 6z6l:LI (3.0) BS02 rna ? GO:0000027 ... Q96L21 32687489
    590730 6z6l:LJ (3.0) BS01 rna ? GO:0000027 ... P62913 32687489
    590731 6z6l:LJ (3.0) BS02 rna ? GO:0000027 ... P62913 32687489
    590732 6z6l:LL (3.0) BS01 rna ? GO:0001824 ... P26373 32687489
    590733 6z6l:LL (3.0) BS02 rna ? GO:0001824 ... P26373 32687489
    590734 6z6l:LM (3.0) BS01 rna ? GO:0002181 ... P50914 32687489
    590735 6z6l:LN (3.0) BS01 rna ? GO:0002181 ... P61313 32687489
    590736 6z6l:LN (3.0) BS02 rna ? GO:0002181 ... P61313 32687489
    590737 6z6l:LO (3.0) BS01 rna ? GO:0002181 ... P40429 32687489
    590738 6z6l:LP (3.0) BS01 rna ? GO:0002181 ... P18621 32687489
    590739 6z6l:LP (3.0) BS02 rna ? GO:0002181 ... P18621 32687489
    590740 6z6l:LQ (3.0) BS01 rna ? GO:0002181 ... Q07020 32687489
    590741 6z6l:LR (3.0) BS01 rna ? GO:0002181 ... P84098 32687489
    590742 6z6l:LR (3.0) BS02 rna ? GO:0002181 ... P84098 32687489
    590743 6z6l:LS (3.0) BS01 rna ? GO:0002181 ... Q02543 32687489
    590744 6z6l:LS (3.0) BS02 rna ? GO:0002181 ... Q02543 32687489
    590745 6z6l:LT (3.0) BS01 rna ? GO:0002181 ... P46778 32687489
    590746 6z6l:LT (3.0) BS02 rna ? GO:0002181 ... P46778 32687489
    590747 6z6l:LU (3.0) BS01 rna ? GO:0002181 ... P35268 32687489
    590748 6z6l:LV (3.0) BS01 rna ? GO:0000122 ... P62829 32687489
    590749 6z6l:LV (3.0) BS02 rna ? GO:0000122 ... P62829 32687489
    590750 6z6l:LW (3.0) BS01 rna ? GO:0000027 ... P83731 32687489
    590751 6z6l:LW (3.0) BS02 rna ? GO:0000027 ... P83731 32687489
    590752 6z6l:LX (3.0) BS01 rna ? GO:0002181 ... P62750 32687489
    590753 6z6l:LX (3.0) BS02 rna ? GO:0002181 ... P62750 32687489
    590754 6z6l:LY (3.0) BS01 rna ? GO:0002181 ... P61254 32687489
    590755 6z6l:LY (3.0) BS02 rna ? GO:0002181 ... P61254 32687489
    590756 6z6l:LZ (3.0) BS01 rna ? GO:0002181 ... P61353 32687489
    590757 6z6l:La (3.0) BS01 rna ? GO:0002181 ... P46776 32687489
    590758 6z6l:Lb (3.0) BS01 rna ? GO:0002181 ... P47914 32687489
    590759 6z6l:Lc (3.0) BS01 rna ? GO:0002181 ... P62888 32687489
    590760 6z6l:Ld (3.0) BS01 rna ? GO:0002181 ... P62899 32687489
    590761 6z6l:Le (3.0) BS01 rna ? GO:0002181 ... P62910 32687489
    590762 6z6l:Le (3.0) BS02 MG ? GO:0002181 ... P62910 32687489
    590763 6z6l:Lf (3.0) BS01 rna ? GO:0000049 ... P18077 32687489
    590764 6z6l:Lg (3.0) BS01 rna ? GO:0002181 ... P49207 32687489
    590765 6z6l:Lg (3.0) BS02 MG ? GO:0002181 ... P49207 32687489
    590766 6z6l:Lg (3.0) BS03 ZN ? GO:0002181 ... P49207 32687489
    590767 6z6l:Lh (3.0) BS01 rna ? GO:0000463 ... P42766 32687489
    590768 6z6l:Lh (3.0) BS02 rna ? GO:0000463 ... P42766 32687489
    590769 6z6l:Li (3.0) BS01 rna ? GO:0002181 ... Q9Y3U8 32687489
    590770 6z6l:Lj (3.0) BS01 rna ? GO:0002181 ... P61927 32687489
    590771 6z6l:Lj (3.0) BS02 rna ? GO:0002181 ... P61927 32687489
    590772 6z6l:Lj (3.0) BS03 ZN ? GO:0002181 ... P61927 32687489
    590773 6z6l:Lk (3.0) BS01 rna ? GO:0001501 ... P63173 32687489
    590774 6z6l:Ll (3.0) BS01 rna ? GO:0002181 ... P62891 32687489
    590775 6z6l:Ll (3.0) BS02 rna ? GO:0002181 ... P62891 32687489
    590776 6z6l:Lm (3.0) BS01 rna ? GO:0002181 ... P62987 32687489
    590777 6z6l:Lm (3.0) BS02 ZN ? GO:0002181 ... P62987 32687489
    590778 6z6l:Lo (3.0) BS01 rna ? GO:0003735 ... J3KQN4 32687489
    590779 6z6l:Lo (3.0) BS02 rna ? GO:0003735 ... J3KQN4 32687489
    590780 6z6l:Lp (3.0) BS01 rna ? GO:0002181 ... P61513 32687489
    590781 6z6l:Lp (3.0) BS02 ZN ? GO:0002181 ... P61513 32687489
    590782 6z6l:Lr (3.0) BS01 rna ? GO:0002181 ... P46779 32687489
    590783 6z6l:Lz (3.0) BS01 rna ? GO:0002181 ... P62906 32687489
    590784 6z6l:Lz (3.0) BS02 rna ? GO:0002181 ... P62906 32687489
    590785 6z6l:SA (3.0) BS01 rna ? GO:0000028 ... P08865 32687489
    590786 6z6l:SB (3.0) BS01 rna ? GO:0002181 ... P61247 32687489
    590787 6z6l:SC (3.0) BS01 rna ? GO:0002181 ... P15880 32687489
    590788 6z6l:SD (3.0) BS01 rna 4.2.99.18 GO:0000977 ... P23396 32687489
    590789 6z6l:SE (3.0) BS01 rna ? GO:0002181 ... P62701 32687489
    590790 6z6l:SF (3.0) BS01 rna ? GO:0000028 ... P46782 32687489
    590791 6z6l:SF (3.0) BS02 rna ? GO:0000028 ... P46782 32687489
    590792 6z6l:SG (3.0) BS01 rna ? GO:0000082 ... P62753 32687489
    590793 6z6l:SH (3.0) BS01 rna ? GO:0001843 ... P62081 32687489
    590794 6z6l:SI (3.0) BS01 rna ? GO:0000462 ... P62241 32687489
    590795 6z6l:SI (3.0) BS02 rna ? GO:0000462 ... P62241 32687489
    590796 6z6l:SJ (3.0) BS01 rna ? GO:0002181 ... P46781 32687489
    590797 6z6l:SK (3.0) BS01 rna ? GO:0002181 ... P46783 32687489
    590798 6z6l:SL (3.0) BS01 rna ? GO:0002181 ... P62280 32687489
    590799 6z6l:SM (3.0) BS01 rna ? GO:0002181 ... P25398 32687489
    590800 6z6l:SN (3.0) BS01 rna ? GO:0002181 ... P62277 32687489

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).