SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2945 2946 2947 2948 2949 2950 2951 2952 2953 2954 2955 2956 2957 2958 2959 2960 2961 2962 2963 2964 2965 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    590801 6z6l:SN (3.0) BS02 rna ? GO:0002181 ... P62277 32687489
    590802 6z6l:SO (3.0) BS01 rna ? GO:0000028 ... P62263 32687489
    590803 6z6l:SP (3.0) BS01 rna ? GO:0000028 ... P62841 32687489
    590804 6z6l:SQ (3.0) BS01 rna ? GO:0000462 ... P62249 32687489
    590805 6z6l:SR (3.0) BS01 rna ? GO:0002181 ... P08708 32687489
    590806 6z6l:SS (3.0) BS01 rna ? GO:0002181 ... P62269 32687489
    590807 6z6l:ST (3.0) BS01 rna ? GO:0000028 ... P39019 32687489
    590808 6z6l:SU (3.0) BS01 rna ? GO:0002181 ... P60866 32687489
    590809 6z6l:SW (3.0) BS01 rna ? GO:0002181 ... P62244 32687489
    590810 6z6l:SX (3.0) BS01 rna ? GO:0002181 ... P62266 32687489
    590811 6z6l:SY (3.0) BS01 rna ? GO:0002181 ... P62847 32687489
    590812 6z6l:SZ (3.0) BS01 rna ? GO:0002181 ... P62851 32687489
    590813 6z6l:Sa (3.0) BS01 rna ? GO:0002181 ... P62854 32687489
    590814 6z6l:Sa (3.0) BS02 ZN ? GO:0002181 ... P62854 32687489
    590815 6z6l:Sb (3.0) BS01 rna ? GO:0000028 ... P42677 32687489
    590816 6z6l:Sc (3.0) BS01 rna ? GO:0000028 ... P62857 32687489
    590817 6z6l:Sd (3.0) BS01 rna ? GO:0002181 ... P62273 32687489
    590818 6z6l:Se (3.0) BS01 rna ? GO:0003735 ... P62861 32687489
    590819 6z6l:Sf (3.0) BS01 rna ? GO:0002181 ... P62979 32687489
    590820 6z6l:Sf (3.0) BS02 ZN ? GO:0002181 ... P62979 32687489
    590821 6z6l:Sg (3.0) BS01 rna ? GO:0001891 ... P63244 32687489
    590822 6z6m:CA (3.1) BS01 rna ? GO:0003676 ... Q9UQ80 32687489
    590823 6z6m:CB (3.1) BS01 rna 3.6.5.- GO:0002244 ... P13639 32687489
    590824 6z6m:CB (3.1) BS02 rna 3.6.5.- GO:0002244 ... P13639 32687489
    590825 6z6m:CD (3.1) BS01 rna ? GO:0003723 ... Q8NC51 32687489
    590826 6z6m:LA (3.1) BS01 rna ? GO:0002181 ... P62917 32687489
    590827 6z6m:LA (3.1) BS02 MG ? GO:0002181 ... P62917 32687489
    590828 6z6m:LB (3.1) BS01 rna ? GO:0002181 ... P39023 32687489
    590829 6z6m:LC (3.1) BS01 rna ? GO:0002181 ... P36578 32687489
    590830 6z6m:LC (3.1) BS02 rna ? GO:0002181 ... P36578 32687489
    590831 6z6m:LD (3.1) BS01 rna ? GO:0000027 ... P46777 32687489
    590832 6z6m:LD (3.1) BS02 rna ? GO:0000027 ... P46777 32687489
    590833 6z6m:LE (3.1) BS01 rna ? GO:0002181 ... Q02878 32687489
    590834 6z6m:LF (3.1) BS01 rna ? GO:0000463 ... P18124 32687489
    590835 6z6m:LF (3.1) BS02 rna ? GO:0000463 ... P18124 32687489
    590836 6z6m:LG (3.1) BS01 rna ? GO:0000470 ... P62424 32687489
    590837 6z6m:LG (3.1) BS02 rna ? GO:0000470 ... P62424 32687489
    590838 6z6m:LH (3.1) BS01 rna ? GO:0002181 ... P32969 32687489
    590839 6z6m:LI (3.1) BS01 rna ? GO:0000027 ... Q96L21 32687489
    590840 6z6m:LI (3.1) BS02 rna ? GO:0000027 ... Q96L21 32687489
    590841 6z6m:LJ (3.1) BS01 rna ? GO:0000027 ... P62913 32687489
    590842 6z6m:LJ (3.1) BS02 rna ? GO:0000027 ... P62913 32687489
    590843 6z6m:LL (3.1) BS01 rna ? GO:0001824 ... P26373 32687489
    590844 6z6m:LL (3.1) BS02 rna ? GO:0001824 ... P26373 32687489
    590845 6z6m:LM (3.1) BS01 rna ? GO:0002181 ... P50914 32687489
    590846 6z6m:LN (3.1) BS01 rna ? GO:0002181 ... P61313 32687489
    590847 6z6m:LN (3.1) BS02 rna ? GO:0002181 ... P61313 32687489
    590848 6z6m:LO (3.1) BS01 rna ? GO:0002181 ... P40429 32687489
    590849 6z6m:LP (3.1) BS01 rna ? GO:0002181 ... P18621 32687489
    590850 6z6m:LP (3.1) BS02 rna ? GO:0002181 ... P18621 32687489
    590851 6z6m:LQ (3.1) BS01 rna ? GO:0002181 ... Q07020 32687489
    590852 6z6m:LR (3.1) BS01 rna ? GO:0002181 ... P84098 32687489
    590853 6z6m:LR (3.1) BS02 rna ? GO:0002181 ... P84098 32687489
    590854 6z6m:LS (3.1) BS01 rna ? GO:0002181 ... Q02543 32687489
    590855 6z6m:LS (3.1) BS02 rna ? GO:0002181 ... Q02543 32687489
    590856 6z6m:LT (3.1) BS01 rna ? GO:0002181 ... P46778 32687489
    590857 6z6m:LT (3.1) BS02 rna ? GO:0002181 ... P46778 32687489
    590858 6z6m:LT (3.1) BS03 MG ? GO:0002181 ... P46778 32687489
    590859 6z6m:LU (3.1) BS01 rna ? GO:0002181 ... P35268 32687489
    590860 6z6m:LV (3.1) BS01 rna ? GO:0000122 ... P62829 32687489
    590861 6z6m:LV (3.1) BS02 rna ? GO:0000122 ... P62829 32687489
    590862 6z6m:LW (3.1) BS01 rna ? GO:0000027 ... P83731 32687489
    590863 6z6m:LW (3.1) BS02 rna ? GO:0000027 ... P83731 32687489
    590864 6z6m:LX (3.1) BS01 rna ? GO:0002181 ... P62750 32687489
    590865 6z6m:LX (3.1) BS02 rna ? GO:0002181 ... P62750 32687489
    590866 6z6m:LY (3.1) BS01 rna ? GO:0002181 ... P61254 32687489
    590867 6z6m:LY (3.1) BS02 rna ? GO:0002181 ... P61254 32687489
    590868 6z6m:LZ (3.1) BS01 rna ? GO:0002181 ... P61353 32687489
    590869 6z6m:La (3.1) BS01 rna ? GO:0002181 ... P46776 32687489
    590870 6z6m:Lb (3.1) BS01 rna ? GO:0002181 ... P47914 32687489
    590871 6z6m:Lc (3.1) BS01 rna ? GO:0002181 ... P62888 32687489
    590872 6z6m:Ld (3.1) BS01 rna ? GO:0002181 ... P62899 32687489
    590873 6z6m:Le (3.1) BS01 rna ? GO:0002181 ... P62910 32687489
    590874 6z6m:Le (3.1) BS02 MG ? GO:0002181 ... P62910 32687489
    590875 6z6m:Lf (3.1) BS01 rna ? GO:0000049 ... P18077 32687489
    590876 6z6m:Lg (3.1) BS01 rna ? GO:0002181 ... P49207 32687489
    590877 6z6m:Lg (3.1) BS02 MG ? GO:0002181 ... P49207 32687489
    590878 6z6m:Lh (3.1) BS01 rna ? GO:0000463 ... P42766 32687489
    590879 6z6m:Lh (3.1) BS02 rna ? GO:0000463 ... P42766 32687489
    590880 6z6m:Li (3.1) BS01 rna ? GO:0002181 ... Q9Y3U8 32687489
    590881 6z6m:Lj (3.1) BS01 rna ? GO:0002181 ... P61927 32687489
    590882 6z6m:Lj (3.1) BS02 rna ? GO:0002181 ... P61927 32687489
    590883 6z6m:Lj (3.1) BS03 ZN ? GO:0002181 ... P61927 32687489
    590884 6z6m:Lk (3.1) BS01 rna ? GO:0001501 ... P63173 32687489
    590885 6z6m:Ll (3.1) BS01 rna ? GO:0002181 ... P62891 32687489
    590886 6z6m:Ll (3.1) BS02 rna ? GO:0002181 ... P62891 32687489
    590887 6z6m:Lm (3.1) BS01 rna ? GO:0002181 ... P62987 32687489
    590888 6z6m:Lm (3.1) BS02 ZN ? GO:0002181 ... P62987 32687489
    590889 6z6m:Lo (3.1) BS01 rna ? GO:0002181 ... P83881 32687489
    590890 6z6m:Lo (3.1) BS02 rna ? GO:0002181 ... P83881 32687489
    590891 6z6m:Lp (3.1) BS01 rna ? GO:0002181 ... P61513 32687489
    590892 6z6m:Lp (3.1) BS02 ZN ? GO:0002181 ... P61513 32687489
    590893 6z6m:Lr (3.1) BS01 rna ? GO:0002181 ... P46779 32687489
    590894 6z6m:Lz (3.1) BS01 rna ? GO:0002181 ... P62906 32687489
    590895 6z6m:SA (3.1) BS01 rna ? GO:0000028 ... P08865 32687489
    590896 6z6m:SB (3.1) BS01 rna ? GO:0002181 ... P61247 32687489
    590897 6z6m:SB (3.1) BS02 rna ? GO:0002181 ... P61247 32687489
    590898 6z6m:SC (3.1) BS01 rna ? GO:0002181 ... P15880 32687489
    590899 6z6m:SD (3.1) BS01 rna 4.2.99.18 GO:0000977 ... P23396 32687489
    590900 6z6m:SE (3.1) BS01 rna ? GO:0002181 ... P62701 32687489
    590901 6z6m:SF (3.1) BS01 rna ? GO:0000028 ... P46782 32687489
    590902 6z6m:SG (3.1) BS01 rna ? GO:0000082 ... P62753 32687489
    590903 6z6m:SH (3.1) BS01 rna ? GO:0001843 ... P62081 32687489
    590904 6z6m:SI (3.1) BS01 rna ? GO:0000462 ... P62241 32687489
    590905 6z6m:SI (3.1) BS02 rna ? GO:0000462 ... P62241 32687489
    590906 6z6m:SJ (3.1) BS01 rna ? GO:0002181 ... P46781 32687489
    590907 6z6m:SK (3.1) BS01 rna ? GO:0002181 ... P46783 32687489
    590908 6z6m:SL (3.1) BS01 rna ? GO:0002181 ... P62280 32687489
    590909 6z6m:SM (3.1) BS01 rna ? GO:0002181 ... P25398 32687489
    590910 6z6m:SN (3.1) BS01 rna ? GO:0002181 ... P62277 32687489
    590911 6z6m:SO (3.1) BS01 rna ? GO:0000028 ... P62263 32687489
    590912 6z6m:SP (3.1) BS01 rna ? GO:0000028 ... P62841 32687489
    590913 6z6m:SQ (3.1) BS01 rna ? GO:0000462 ... P62249 32687489
    590914 6z6m:SR (3.1) BS01 rna ? GO:0002181 ... P08708 32687489
    590915 6z6m:SS (3.1) BS01 rna ? GO:0002181 ... P62269 32687489
    590916 6z6m:ST (3.1) BS01 rna ? GO:0000028 ... P39019 32687489
    590917 6z6m:SU (3.1) BS01 rna ? GO:0002181 ... P60866 32687489
    590918 6z6m:SW (3.1) BS01 rna ? GO:0002181 ... P62244 32687489
    590919 6z6m:SX (3.1) BS01 rna ? GO:0002181 ... P62266 32687489
    590920 6z6m:SY (3.1) BS01 rna ? GO:0002181 ... P62847 32687489
    590921 6z6m:SZ (3.1) BS01 rna ? GO:0002181 ... P62851 32687489
    590922 6z6m:Sa (3.1) BS01 rna ? GO:0002181 ... P62854 32687489
    590923 6z6m:Sa (3.1) BS02 ZN ? GO:0002181 ... P62854 32687489
    590924 6z6m:Sb (3.1) BS01 rna ? GO:0000028 ... P42677 32687489
    590925 6z6m:Sc (3.1) BS01 rna ? GO:0000028 ... P62857 32687489
    590926 6z6m:Sd (3.1) BS01 rna ? GO:0002181 ... P62273 32687489
    590927 6z6m:Se (3.1) BS01 rna ? GO:0003735 ... P62861 32687489
    590928 6z6m:Sf (3.1) BS01 rna ? GO:0002181 ... P62979 32687489
    590929 6z6m:Sg (3.1) BS01 rna ? GO:0001891 ... P63244 32687489
    590930 6z6n:CA (2.9) BS01 rna ? GO:0003676 ... Q9UQ80 32687489
    590931 6z6n:CB (2.9) BS01 rna 3.6.5.- GO:0002244 ... P13639 32687489
    590932 6z6n:CB (2.9) BS02 rna 3.6.5.- GO:0002244 ... P13639 32687489
    590933 6z6n:CD (2.9) BS01 rna ? GO:0003723 ... Q8NC51 32687489
    590934 6z6n:LA (2.9) BS01 rna ? GO:0002181 ... P62917 32687489
    590935 6z6n:LA (2.9) BS02 MG ? GO:0002181 ... P62917 32687489
    590936 6z6n:LB (2.9) BS01 rna ? GO:0002181 ... P39023 32687489
    590937 6z6n:LC (2.9) BS01 rna ? GO:0002181 ... P36578 32687489
    590938 6z6n:LC (2.9) BS02 rna ? GO:0002181 ... P36578 32687489
    590939 6z6n:LD (2.9) BS01 rna ? GO:0000027 ... P46777 32687489
    590940 6z6n:LD (2.9) BS02 rna ? GO:0000027 ... P46777 32687489
    590941 6z6n:LE (2.9) BS01 rna ? GO:0002181 ... Q02878 32687489
    590942 6z6n:LF (2.9) BS01 rna ? GO:0000463 ... P18124 32687489
    590943 6z6n:LF (2.9) BS02 rna ? GO:0000463 ... P18124 32687489
    590944 6z6n:LG (2.9) BS01 rna ? GO:0000470 ... P62424 32687489
    590945 6z6n:LG (2.9) BS02 rna ? GO:0000470 ... P62424 32687489
    590946 6z6n:LH (2.9) BS01 rna ? GO:0002181 ... P32969 32687489
    590947 6z6n:LI (2.9) BS01 rna ? GO:0000027 ... Q96L21 32687489
    590948 6z6n:LI (2.9) BS02 rna ? GO:0000027 ... Q96L21 32687489
    590949 6z6n:LJ (2.9) BS01 rna ? GO:0000027 ... P62913 32687489
    590950 6z6n:LJ (2.9) BS02 rna ? GO:0000027 ... P62913 32687489
    590951 6z6n:LL (2.9) BS01 rna ? GO:0001824 ... P26373 32687489
    590952 6z6n:LL (2.9) BS02 rna ? GO:0001824 ... P26373 32687489
    590953 6z6n:LM (2.9) BS01 rna ? GO:0002181 ... P50914 32687489
    590954 6z6n:LN (2.9) BS01 rna ? GO:0002181 ... P61313 32687489
    590955 6z6n:LN (2.9) BS02 rna ? GO:0002181 ... P61313 32687489
    590956 6z6n:LO (2.9) BS01 rna ? GO:0002181 ... P40429 32687489
    590957 6z6n:LP (2.9) BS01 rna ? GO:0002181 ... P18621 32687489
    590958 6z6n:LP (2.9) BS02 rna ? GO:0002181 ... P18621 32687489
    590959 6z6n:LQ (2.9) BS01 rna ? GO:0002181 ... Q07020 32687489
    590960 6z6n:LR (2.9) BS01 rna ? GO:0002181 ... P84098 32687489
    590961 6z6n:LR (2.9) BS02 rna ? GO:0002181 ... P84098 32687489
    590962 6z6n:LS (2.9) BS01 rna ? GO:0002181 ... Q02543 32687489
    590963 6z6n:LS (2.9) BS02 rna ? GO:0002181 ... Q02543 32687489
    590964 6z6n:LT (2.9) BS01 rna ? GO:0002181 ... P46778 32687489
    590965 6z6n:LT (2.9) BS02 rna ? GO:0002181 ... P46778 32687489
    590966 6z6n:LU (2.9) BS01 rna ? GO:0002181 ... P35268 32687489
    590967 6z6n:LV (2.9) BS01 rna ? GO:0000122 ... P62829 32687489
    590968 6z6n:LV (2.9) BS02 rna ? GO:0000122 ... P62829 32687489
    590969 6z6n:LW (2.9) BS01 rna ? GO:0000027 ... P83731 32687489
    590970 6z6n:LW (2.9) BS02 rna ? GO:0000027 ... P83731 32687489
    590971 6z6n:LX (2.9) BS01 rna ? GO:0002181 ... P62750 32687489
    590972 6z6n:LX (2.9) BS02 rna ? GO:0002181 ... P62750 32687489
    590973 6z6n:LY (2.9) BS01 rna ? GO:0002181 ... P61254 32687489
    590974 6z6n:LY (2.9) BS02 rna ? GO:0002181 ... P61254 32687489
    590975 6z6n:LZ (2.9) BS01 rna ? GO:0002181 ... P61353 32687489
    590976 6z6n:La (2.9) BS01 rna ? GO:0002181 ... P46776 32687489
    590977 6z6n:Lb (2.9) BS01 rna ? GO:0002181 ... P47914 32687489
    590978 6z6n:Lc (2.9) BS01 rna ? GO:0002181 ... P62888 32687489
    590979 6z6n:Ld (2.9) BS01 rna ? GO:0002181 ... P62899 32687489
    590980 6z6n:Le (2.9) BS01 rna ? GO:0002181 ... P62910 32687489
    590981 6z6n:Le (2.9) BS02 MG ? GO:0002181 ... P62910 32687489
    590982 6z6n:Lf (2.9) BS01 rna ? GO:0000049 ... P18077 32687489
    590983 6z6n:Lg (2.9) BS01 rna ? GO:0002181 ... P49207 32687489
    590984 6z6n:Lg (2.9) BS02 MG ? GO:0002181 ... P49207 32687489
    590985 6z6n:Lg (2.9) BS03 ZN ? GO:0002181 ... P49207 32687489
    590986 6z6n:Lh (2.9) BS01 rna ? GO:0000463 ... P42766 32687489
    590987 6z6n:Lh (2.9) BS02 rna ? GO:0000463 ... P42766 32687489
    590988 6z6n:Li (2.9) BS01 rna ? GO:0002181 ... Q9Y3U8 32687489
    590989 6z6n:Lj (2.9) BS01 rna ? GO:0002181 ... P61927 32687489
    590990 6z6n:Lj (2.9) BS02 rna ? GO:0002181 ... P61927 32687489
    590991 6z6n:Lj (2.9) BS03 ZN ? GO:0002181 ... P61927 32687489
    590992 6z6n:Lk (2.9) BS01 rna ? GO:0001501 ... P63173 32687489
    590993 6z6n:Ll (2.9) BS01 rna ? GO:0002181 ... P62891 32687489
    590994 6z6n:Ll (2.9) BS02 rna ? GO:0002181 ... P62891 32687489
    590995 6z6n:Lm (2.9) BS01 rna ? GO:0002181 ... P62987 32687489
    590996 6z6n:Lm (2.9) BS02 ZN ? GO:0002181 ... P62987 32687489
    590997 6z6n:Lo (2.9) BS01 rna ? GO:0002181 ... P83881 32687489
    590998 6z6n:Lo (2.9) BS02 rna ? GO:0002181 ... P83881 32687489
    590999 6z6n:Lo (2.9) BS03 ZN ? GO:0002181 ... P83881 32687489
    591000 6z6n:Lp (2.9) BS01 rna ? GO:0002181 ... P61513 32687489

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).