SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    591801 6zaw:A (1.3) BS06 NO 1.7.2.1 GO:0005507 ... H0SLX7 33523860
    591802 6zax:A (1.48) BS01 GLC 1.7.2.1 GO:0005507 ... H0SLX7 33523860
    591803 6zax:A (1.48) BS02 FRU 1.7.2.1 GO:0005507 ... H0SLX7 33523860
    591804 6zax:A (1.48) BS03 FRU 1.7.2.1 GO:0005507 ... H0SLX7 33523860
    591805 6zax:A (1.48) BS04 CU 1.7.2.1 GO:0005507 ... H0SLX7 33523860
    591806 6zax:A (1.48) BS05 CU 1.7.2.1 GO:0005507 ... H0SLX7 33523860
    591807 6zax:A (1.48) BS06 NO2 1.7.2.1 GO:0005507 ... H0SLX7 33523860
    591808 6zay:A (2.4) BS01 MG ? GO:0003924 ... Q9H082 32960676
    591809 6zay:A (2.4) BS02 GDP ? GO:0003924 ... Q9H082 32960676
    591810 6zay:B (2.4) BS01 MG ? GO:0003924 ... Q9H082 32960676
    591811 6zay:B (2.4) BS02 GDP ? GO:0003924 ... Q9H082 32960676
    591812 6zay:D (2.4) BS01 PO4 ? GO:0000045 ... Q8C0J2 32960676
    591813 6zay:D (2.4) BS02 PO4 ? GO:0000045 ... Q8C0J2 32960676
    591814 6zaz:A (2.69) BS01 FRU ? GO:0009279 ... Q8A6W4 33398001
    591815 6zaz:A (2.69) BS02 FRU ? GO:0009279 ... Q8A6W4 33398001
    591816 6zaz:A (2.69) BS03 FRU ? GO:0009279 ... Q8A6W4 33398001
    591817 6zaz:A (2.69) BS04 MG ? GO:0009279 ... Q8A6W4 33398001
    591818 6zaz:B (2.69) BS01 FRU ? N/A Q8A6W3 33398001
    591819 6zaz:B (2.69) BS02 FRU ? N/A Q8A6W3 33398001
    591820 6zaz:B (2.69) BS03 FRU ? N/A Q8A6W3 33398001
    591821 6zaz:B (2.69) BS04 FRU ? N/A Q8A6W3 33398001
    591822 6zaz:B (2.69) BS05 C8E ? N/A Q8A6W3 33398001
    591823 6zaz:B (2.69) BS06 C8E ? N/A Q8A6W3 33398001
    591824 6zaz:B (2.69) BS07 MG ? N/A Q8A6W3 33398001
    591825 6zb0:AAA (1.613) BS01 QCW ? N/A P25440 32702236 BindingDB: IC50=15849nM
    591826 6zb1:AAA (1.6) BS01 QCZ ? N/A P25440 32702236 BindingDB: IC50=25119nM
    591827 6zb2:AAA (2.282) BS01 QD5 ? N/A P25440 32702236 BindingDB: IC50=<50119nM
    591828 6zb3:AAA (1.419) BS01 QCZ ? N/A O60885 32702236 BindingDB: IC50=79nM
    591829 6zb4:A (3.03) BS01 EIC ? GO:0016020 ... P0DTC2 32958580
    591830 6zb4:B (3.03) BS01 EIC ? GO:0016020 ... P0DTC2 32958580
    591831 6zb4:C (3.03) BS01 EIC ? GO:0016020 ... P0DTC2 32958580
    591832 6zb5:A (2.85) BS01 EIC ? GO:0016020 ... P0DTC2 32958580
    591833 6zb5:B (2.85) BS01 EIC ? GO:0016020 ... P0DTC2 32958580
    591834 6zb5:C (2.85) BS01 EIC ? GO:0016020 ... P0DTC2 32958580
    591835 6zb6:A (1.9) BS01 GTB 2.5.1.18 GO:0004364 ... M5BPX4 33257232
    591836 6zb6:B (1.9) BS01 GTB 2.5.1.18 GO:0004364 ... M5BPX4 33257232
    591837 6zb6:C (1.9) BS01 GTB 2.5.1.18 GO:0004364 ... M5BPX4 33257232
    591838 6zb6:D (1.9) BS01 GSH 2.5.1.18 GO:0004364 ... M5BPX4 33257232
    591839 6zb6:E (1.9) BS01 GTB 2.5.1.18 GO:0004364 ... M5BPX4 33257232
    591840 6zb6:F (1.9) BS01 GTB 2.5.1.18 GO:0004364 ... M5BPX4 33257232
    591841 6zba:AAA (1.6) BS01 QDT 3.1.4.53 GO:0004114 ... Q08499 33054196
    591842 6zba:AAA (1.6) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 33054196
    591843 6zba:BBB (1.6) BS01 QDT 3.1.4.53 GO:0004114 ... Q08499 33054196
    591844 6zba:BBB (1.6) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 33054196
    591845 6zba:CCC (1.6) BS01 QDT 3.1.4.53 GO:0004114 ... Q08499 33054196
    591846 6zba:CCC (1.6) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 33054196
    591847 6zba:DDD (1.6) BS01 QDT 3.1.4.53 GO:0004114 ... Q08499 33054196
    591848 6zba:DDD (1.6) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 33054196
    591849 6zbb:a (3.61) BS01 CDL ? GO:0005739 ... P00847 32900941
    591850 6zbb:a (3.61) BS02 CDL ? GO:0005739 ... P00847 32900941
    591851 6zbb:b (3.61) BS01 CDL ? GO:0015078 ... P13619 32900941
    591852 6zbb:b (3.61) BS02 CDL ? GO:0015078 ... P13619 32900941
    591853 6zbb:f (3.61) BS01 CDL ? GO:0005739 ... Q28851 32900941
    591854 6zbb:f (3.61) BS02 CDL ? GO:0005739 ... Q28851 32900941
    591855 6zbi:A (-1.00) BS01 CA ? GO:0000086 ... P0DP23 33655882
    591856 6zbi:A (-1.00) BS02 CA ? GO:0000086 ... P0DP23 33655882
    591857 6zbi:A (-1.00) BS03 CA ? GO:0000086 ... P0DP23 33655882
    591858 6zbi:A (-1.00) BS04 CA ? GO:0000086 ... P0DP23 33655882
    591859 6zbm:A (1.47) BS01 QE8 3.2.1.101 GO:0005975 ... A0A6B9HEB8 33878235
    591860 6zbn:A (2.01) BS01 QEE 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591861 6zbn:A (2.01) BS02 MN 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591862 6zbn:B (2.01) BS01 QEE 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591863 6zbn:B (2.01) BS02 MN 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591864 6zbn:C (2.01) BS01 QEE 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591865 6zbn:C (2.01) BS02 MN 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591866 6zbn:D (2.01) BS01 QEE 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591867 6zbn:D (2.01) BS02 MN 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591868 6zbn:E (2.01) BS01 QEE 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591869 6zbn:E (2.01) BS02 MN 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591870 6zbn:F (2.01) BS01 QEE 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591871 6zbn:F (2.01) BS02 MN 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591872 6zbo:A (1.79) BS01 MN 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591873 6zbo:A (1.79) BS02 QEQ 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591874 6zbo:B (1.79) BS01 MN 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591875 6zbo:B (1.79) BS02 QEQ 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591876 6zbo:C (1.79) BS01 MN 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591877 6zbo:C (1.79) BS02 QEQ 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591878 6zbo:D (1.79) BS01 MN 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591879 6zbo:D (1.79) BS02 QEQ 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591880 6zbo:E (1.79) BS01 MN 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591881 6zbo:E (1.79) BS02 QEQ 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591882 6zbo:F (1.79) BS01 MN 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591883 6zbo:F (1.79) BS02 QEQ 1.14.11.29 GO:0005506 ... Q9GZT9 33792169
    591884 6zbq:A (1.43) BS01 QE2 ? GO:0016055 ... Q92997 N/A
    591885 6zbq:B (1.43) BS01 QE2 ? GO:0016055 ... Q92997 N/A
    591886 6zbr:W (1.6) BS01 peptide ? GO:0008083 ... P15692 35665969
    591887 6zbt:A (1.79949) BS01 peptide ? GO:0002842 ... P61981 34294877
    591888 6zbt:A (1.79949) BS02 CFH ? GO:0002842 ... P61981 34294877
    591889 6zbt:A (1.79949) BS03 CFH ? GO:0002842 ... P61981 34294877
    591890 6zbt:A (1.79949) BS04 CFH ? GO:0002842 ... P61981 34294877
    591891 6zbt:B (1.79949) BS01 peptide ? GO:0002842 ... P61981 34294877
    591892 6zbt:B (1.79949) BS02 peptide ? GO:0002842 ... P61981 34294877
    591893 6zbt:B (1.79949) BS03 CFH ? GO:0002842 ... P61981 34294877
    591894 6zbt:C (1.79949) BS01 peptide ? GO:0002842 ... P61981 34294877
    591895 6zbt:C (1.79949) BS02 CFH ? GO:0002842 ... P61981 34294877
    591896 6zbt:D (1.79949) BS01 peptide ? GO:0002842 ... P61981 34294877
    591897 6zbt:D (1.79949) BS02 peptide ? GO:0002842 ... P61981 34294877
    591898 6zbt:D (1.79949) BS03 CFH ? GO:0002842 ... P61981 34294877
    591899 6zbu:A (2.46) BS01 peptide ? N/A O75376
    P41182
    33708392
    591900 6zbu:A (2.46) BS02 peptide ? N/A O75376
    P41182
    33708392
    591901 6zbu:B (2.46) BS01 peptide ? N/A O75376
    P41182
    33708392
    591902 6zbu:B (2.46) BS02 peptide ? N/A O75376
    P41182
    33708392
    591903 6zbu:E (2.46) BS01 peptide ? N/A O75376
    P41182
    33708392
    591904 6zbu:E (2.46) BS02 peptide ? N/A O75376
    P41182
    33708392
    591905 6zbu:F (2.46) BS01 peptide ? N/A O75376
    P41182
    33708392
    591906 6zbu:F (2.46) BS02 peptide ? N/A O75376
    P41182
    33708392
    591907 6zbu:I (2.46) BS01 peptide ? N/A O75376
    P41182
    33708392
    591908 6zbu:I (2.46) BS02 peptide ? N/A O75376
    P41182
    33708392
    591909 6zbu:J (2.46) BS01 peptide ? N/A O75376
    P41182
    33708392
    591910 6zbu:J (2.46) BS02 peptide ? N/A O75376
    P41182
    33708392
    591911 6zbv:A (3.4) BS01 QET ? GO:0016020 ... P48067 33658720
    591912 6zbw:A (1.4) BS01 MAN 3.2.1.101 GO:0005975 ... A0A6B9HEB8 33878235
    591913 6zbw:A (1.4) BS02 PBW 3.2.1.101 GO:0005975 ... A0A6B9HEB8 33878235
    591914 6zbw:B (1.4) BS01 MAN 3.2.1.101 GO:0005975 ... A0A6B9HEB8 33878235
    591915 6zbw:B (1.4) BS02 PBW 3.2.1.101 GO:0005975 ... A0A6B9HEB8 33878235
    591916 6zbx:A (1.35) BS01 PBW 3.2.1.101 GO:0005975 ... A0A6B9HEB8 33878235
    591917 6zbx:A (1.35) BS02 M96 3.2.1.101 GO:0005975 ... A0A6B9HEB8 33878235
    591918 6zbx:A (1.35) BS03 MAN 3.2.1.101 GO:0005975 ... A0A6B9HEB8 33878235
    591919 6zbx:B (1.35) BS01 PBW 3.2.1.101 GO:0005975 ... A0A6B9HEB8 33878235
    591920 6zbx:B (1.35) BS02 M96 3.2.1.101 GO:0005975 ... A0A6B9HEB8 33878235
    591921 6zbx:B (1.35) BS03 MAN 3.2.1.101 GO:0005975 ... A0A6B9HEB8 33878235
    591922 6zbz:A (1.6) BS01 QE5 ? GO:0016055 ... Q92997 N/A
    591923 6zbz:B (1.6) BS01 QE5 ? GO:0016055 ... Q92997 N/A
    591924 6zbz:C (1.6) BS01 QE5 ? GO:0016055 ... Q92997 N/A
    591925 6zbz:D (1.6) BS01 QE5 ? GO:0016055 ... Q92997 N/A
    591926 6zc0:A (1.97) BS01 QDZ 2.7.10.2 GO:0004672 ... P43405 N/A
    591927 6zc3:A (1.67) BS01 JOR ? GO:0016055 ... Q92997 N/A
    591928 6zc3:B (1.67) BS01 JOR ? GO:0016055 ... Q92997 N/A
    591929 6zc4:A (1.85) BS01 QEZ ? GO:0016055 ... Q92997 N/A
    591930 6zc4:B (1.85) BS01 QEZ ? GO:0016055 ... Q92997 N/A
    591931 6zc6:A (1.58) BS01 QEN ? GO:0016055 ... Q92997 N/A
    591932 6zc6:A (1.58) BS02 QEN ? GO:0016055 ... Q92997 N/A
    591933 6zc7:A (1.48) BS01 V31 ? GO:0016055 ... Q92997 N/A
    591934 6zc7:A (1.48) BS02 V31 ? GO:0016055 ... Q92997 N/A
    591935 6zc7:B (1.48) BS01 V31 ? GO:0016055 ... Q92997 N/A
    591936 6zc8:A (2.76) BS01 QEK ? GO:0016055 ... Q92997 N/A
    591937 6zc8:B (2.76) BS01 QEK ? GO:0016055 ... Q92997 N/A
    591938 6zc9:A (1.89896) BS01 peptide ? GO:0002842 ... P61981 34294877
    591939 6zc9:A (1.89896) BS02 CFH ? GO:0002842 ... P61981 34294877
    591940 6zc9:B (1.89896) BS01 peptide ? GO:0002842 ... P61981 34294877
    591941 6zc9:B (1.89896) BS02 peptide ? GO:0002842 ... P61981 34294877
    591942 6zc9:B (1.89896) BS03 CFH ? GO:0002842 ... P61981 34294877
    591943 6zc9:B (1.89896) BS04 CFH ? GO:0002842 ... P61981 34294877
    591944 6zc9:C (1.89896) BS01 peptide ? GO:0002842 ... P61981 34294877
    591945 6zc9:C (1.89896) BS02 peptide ? GO:0002842 ... P61981 34294877
    591946 6zc9:C (1.89896) BS03 CFH ? GO:0002842 ... P61981 34294877
    591947 6zc9:D (1.89896) BS01 peptide ? GO:0002842 ... P61981 34294877
    591948 6zc9:D (1.89896) BS02 CFH ? GO:0002842 ... P61981 34294877
    591949 6zc9:D (1.89896) BS03 CFH ? GO:0002842 ... P61981 34294877
    591950 6zc9:D (1.89896) BS04 CFH ? GO:0002842 ... P61981 34294877
    591951 6zca:Y (4.2) BS01 ZN 2.7.7.6 GO:0000287 ... P37871 33339827
    591952 6zcc:A (1.52) BS01 OEH 3.8.1.5 GO:0003824 ... P0A3G3 34339177
    591953 6zcd:W (1.8) BS01 peptide ? GO:0008083 ... P15692 35665969
    591954 6zce:B (5.3) BS01 rna ? GO:0000028 ... P32905 33289941
    591955 6zce:C (5.3) BS01 rna ? GO:0000462 ... P33442 33289941
    591956 6zce:D (5.3) BS01 rna ? GO:0000054 ... P25443 33289941
    591957 6zce:E (5.3) BS01 rna ? GO:0000054 ... P05750 33289941
    591958 6zce:F (5.3) BS01 rna ? GO:0002181 ... P0CX35 33289941
    591959 6zce:G (5.3) BS01 rna ? GO:0000028 ... P26783 33289941
    591960 6zce:H (5.3) BS01 rna ? GO:0000462 ... P0CX37 33289941
    591961 6zce:I (5.3) BS01 rna ? GO:0002181 ... P26786 33289941
    591962 6zce:J (5.3) BS01 rna ? GO:0000462 ... P0CX39 33289941
    591963 6zce:K (5.3) BS01 rna ? GO:0000462 ... O13516 33289941
    591964 6zce:L (5.3) BS01 rna ? GO:0000054 ... Q08745 33289941
    591965 6zce:M (5.3) BS01 rna ? GO:0000028 ... P0CX47 33289941
    591966 6zce:N (5.3) BS01 rna ? GO:0000028 ... P48589 33289941
    591967 6zce:O (5.3) BS01 rna ? GO:0000462 ... P05756 33289941
    591968 6zce:P (5.3) BS01 rna ? GO:0000028 ... P06367 33289941
    591969 6zce:Q (5.3) BS01 rna ? GO:0000028 ... Q01855 33289941
    591970 6zce:R (5.3) BS01 rna ? GO:0000462 ... P0CX51 33289941
    591971 6zce:S (5.3) BS01 rna ? GO:0000028 ... P02407 33289941
    591972 6zce:T (5.3) BS01 rna ? GO:0000054 ... P0CX55 33289941
    591973 6zce:U (5.3) BS01 rna ? GO:0000028 ... P07280 33289941
    591974 6zce:V (5.3) BS01 rna ? GO:0000462 ... P38701 33289941
    591975 6zce:X (5.3) BS01 rna ? GO:0002181 ... P0C0W1 33289941
    591976 6zce:Y (5.3) BS01 rna ? GO:0000462 ... P0CX29 33289941
    591977 6zce:Z (5.3) BS01 rna ? GO:0000462 ... P0CX31 33289941
    591978 6zce:a (5.3) BS01 rna ? GO:0002181 ... Q3E792 33289941
    591979 6zce:b (5.3) BS01 rna ? GO:0000054 ... P39938 33289941
    591980 6zce:c (5.3) BS01 rna ? GO:0000028 ... P35997 33289941
    591981 6zce:d (5.3) BS01 rna ? GO:0000028 ... P0C0X0 33289941
    591982 6zce:e (5.3) BS01 rna ? GO:0002181 ... P41057 33289941
    591983 6zce:f (5.3) BS01 rna ? GO:0002181 ... P0CX33 33289941
    591984 6zce:g (5.3) BS01 rna ? GO:0000028 ... P05759 33289941
    591985 6zce:g (5.3) BS02 ZN ? GO:0000028 ... P05759 33289941
    591986 6zce:h (5.3) BS01 rna ? GO:0001965 ... P38011 33289941
    591987 6zce:i (5.3) BS01 rna ? GO:0001677 ... P38912 33289941
    591988 6zce:k (5.3) BS01 rna ? GO:0000054 ... Q03195 33289941
    591989 6zce:k (5.3) BS02 ADP ? GO:0000054 ... Q03195 33289941
    591990 6zce:k (5.3) BS03 ATP ? GO:0000054 ... Q03195 33289941
    591991 6zce:k (5.3) BS04 SF4 ? GO:0000054 ... Q03195 33289941
    591992 6zce:k (5.3) BS05 SF4 ? GO:0000054 ... Q03195 33289941
    591993 6zce:m (5.3) BS01 rna ? GO:0001731 ... P32911 33289941
    591994 6zce:p (5.3) BS01 rna ? GO:0001732 ... P06103 33289941
    591995 6zce:q (5.3) BS01 rna ? GO:0001732 ... P32497 33289941
    591996 6zce:s (5.3) BS01 rna ? GO:0000184 ... Q05775 33289941
    591997 6zci:A (1.976) BS01 QFN ? N/A O60885 33462494 BindingDB: IC50=17nM
    591998 6zcj:A (1.53) BS01 peptide ? GO:0000122 ... P31947 33159816
    591999 6zcj:A (1.53) BS02 MG ? GO:0000122 ... P31947 33159816
    592000 6zck:A (2.7) BS01 QFW 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    N/A Q86887 33637854

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).