SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    592601 6zi7:E (2.28) BS01 HEM ? GO:0004497 ... Q59819 33036250
    592602 6zi7:E (2.28) BS02 QR8 ? GO:0004497 ... Q59819 33036250
    592603 6zi7:F (2.28) BS01 HEM ? GO:0004497 ... Q59819 33036250
    592604 6zi7:F (2.28) BS02 QR8 ? GO:0004497 ... Q59819 33036250
    592605 6zi9:C (2.8) BS01 HEC ? GO:0005506 ... P07173 33268896
    592606 6zi9:C (2.8) BS02 HEC ? GO:0005506 ... P07173 33268896
    592607 6zi9:C (2.8) BS03 HEC ? GO:0005506 ... P07173 33268896
    592608 6zi9:C (2.8) BS04 HEC ? GO:0005506 ... P07173 33268896
    592609 6zi9:L (2.8) BS01 BCB ? GO:0009772 ... P06009 33268896
    592610 6zi9:L (2.8) BS02 BCB ? GO:0009772 ... P06009 33268896
    592611 6zi9:L (2.8) BS03 BPB ? GO:0009772 ... P06009 33268896
    592612 6zi9:L (2.8) BS04 BCB ? GO:0009772 ... P06009 33268896
    592613 6zi9:L (2.8) BS05 FE ? GO:0009772 ... P06009 33268896
    592614 6zi9:L (2.8) BS06 MQ7 ? GO:0009772 ... P06009 33268896
    592615 6zi9:L (2.8) BS07 BPB ? GO:0009772 ... P06009 33268896
    592616 6zi9:M (2.8) BS01 BCB ? GO:0009772 ... P06010 33268896
    592617 6zi9:M (2.8) BS02 BPB ? GO:0009772 ... P06010 33268896
    592618 6zi9:M (2.8) BS03 BCB ? GO:0009772 ... P06010 33268896
    592619 6zi9:M (2.8) BS04 FE ? GO:0009772 ... P06010 33268896
    592620 6zi9:M (2.8) BS05 MQ7 ? GO:0009772 ... P06010 33268896
    592621 6zi9:M (2.8) BS06 BCB ? GO:0009772 ... P06010 33268896
    592622 6zi9:M (2.8) BS07 BPB ? GO:0009772 ... P06010 33268896
    592623 6zi9:M (2.8) BS08 NS5 ? GO:0009772 ... P06010 33268896
    592624 6zia:C (2.8) BS01 HEC ? GO:0005506 ... P07173 33268896
    592625 6zia:C (2.8) BS02 HEC ? GO:0005506 ... P07173 33268896
    592626 6zia:C (2.8) BS03 HEC ? GO:0005506 ... P07173 33268896
    592627 6zia:C (2.8) BS04 HEC ? GO:0005506 ... P07173 33268896
    592628 6zia:L (2.8) BS01 BCB ? GO:0009772 ... P06009 33268896
    592629 6zia:L (2.8) BS02 BCB ? GO:0009772 ... P06009 33268896
    592630 6zia:L (2.8) BS03 BPB ? GO:0009772 ... P06009 33268896
    592631 6zia:L (2.8) BS04 BCB ? GO:0009772 ... P06009 33268896
    592632 6zia:L (2.8) BS05 BPB ? GO:0009772 ... P06009 33268896
    592633 6zia:L (2.8) BS06 FE ? GO:0009772 ... P06009 33268896
    592634 6zia:L (2.8) BS07 MQ7 ? GO:0009772 ... P06009 33268896
    592635 6zia:M (2.8) BS01 BCB ? GO:0009772 ... P06010 33268896
    592636 6zia:M (2.8) BS02 BPB ? GO:0009772 ... P06010 33268896
    592637 6zia:M (2.8) BS03 BCB ? GO:0009772 ... P06010 33268896
    592638 6zia:M (2.8) BS04 BPB ? GO:0009772 ... P06010 33268896
    592639 6zia:M (2.8) BS05 FE ? GO:0009772 ... P06010 33268896
    592640 6zia:M (2.8) BS06 MQ7 ? GO:0009772 ... P06010 33268896
    592641 6zia:M (2.8) BS07 BCB ? GO:0009772 ... P06010 33268896
    592642 6zia:M (2.8) BS08 NS5 ? GO:0009772 ... P06010 33268896
    592643 6zib:AAA (2.7) BS01 CAA 1.1.1.35
    4.2.1.17
    5.3.3.8
    GO:0003824 ... P07896 38458818
    592644 6zib:AAA (2.7) BS02 NAI 1.1.1.35
    4.2.1.17
    5.3.3.8
    GO:0003824 ... P07896 38458818
    592645 6zib:BBB (2.7) BS01 CAA 1.1.1.35
    4.2.1.17
    5.3.3.8
    GO:0003824 ... P07896 38458818
    592646 6zib:BBB (2.7) BS02 NAI 1.1.1.35
    4.2.1.17
    5.3.3.8
    GO:0003824 ... P07896 38458818
    592647 6zic:AAA (2.2) BS01 3HC 1.1.1.35
    4.2.1.17
    5.3.3.8
    GO:0003824 ... P07896 38458818
    592648 6zic:AAA (2.2) BS02 NAI 1.1.1.35
    4.2.1.17
    5.3.3.8
    GO:0003824 ... P07896 38458818
    592649 6zic:BBB (2.2) BS01 3HC 1.1.1.35
    4.2.1.17
    5.3.3.8
    GO:0003824 ... P07896 38458818
    592650 6zic:BBB (2.2) BS02 NAI 1.1.1.35
    4.2.1.17
    5.3.3.8
    GO:0003824 ... P07896 38458818
    592651 6zid:C (2.8) BS01 HEC ? GO:0005506 ... P07173 33268896
    592652 6zid:C (2.8) BS02 HEC ? GO:0005506 ... P07173 33268896
    592653 6zid:C (2.8) BS03 HEC ? GO:0005506 ... P07173 33268896
    592654 6zid:C (2.8) BS04 HEC ? GO:0005506 ... P07173 33268896
    592655 6zid:L (2.8) BS01 BCB ? GO:0009772 ... P06009 33268896
    592656 6zid:L (2.8) BS02 BCB ? GO:0009772 ... P06009 33268896
    592657 6zid:L (2.8) BS03 BPB ? GO:0009772 ... P06009 33268896
    592658 6zid:L (2.8) BS04 BCB ? GO:0009772 ... P06009 33268896
    592659 6zid:L (2.8) BS05 FE ? GO:0009772 ... P06009 33268896
    592660 6zid:L (2.8) BS06 MQ7 ? GO:0009772 ... P06009 33268896
    592661 6zid:L (2.8) BS07 BPB ? GO:0009772 ... P06009 33268896
    592662 6zid:M (2.8) BS01 BCB ? GO:0009772 ... P06010 33268896
    592663 6zid:M (2.8) BS02 BPB ? GO:0009772 ... P06010 33268896
    592664 6zid:M (2.8) BS03 BCB ? GO:0009772 ... P06010 33268896
    592665 6zid:M (2.8) BS04 FE ? GO:0009772 ... P06010 33268896
    592666 6zid:M (2.8) BS05 MQ7 ? GO:0009772 ... P06010 33268896
    592667 6zid:M (2.8) BS06 BCB ? GO:0009772 ... P06010 33268896
    592668 6zid:M (2.8) BS07 BPB ? GO:0009772 ... P06010 33268896
    592669 6zid:M (2.8) BS08 NS5 ? GO:0009772 ... P06010 33268896
    592670 6zie:A (2.3) BS01 ZN N/A N/A N/A 33771865
    592671 6zie:A (2.3) BS02 ZN N/A N/A N/A 33771865
    592672 6zie:B (2.3) BS01 ZN ? GO:0042981 ... Q07820 33771865
    592673 6zif:A (2.2) BS01 CU1 N/A N/A N/A N/A
    592674 6zif:A (2.2) BS02 CU1 N/A N/A N/A N/A
    592675 6zif:A (2.2) BS03 CU1 N/A N/A N/A N/A
    592676 6zif:A (2.2) BS04 CU1 N/A N/A N/A N/A
    592677 6zif:A (2.2) BS05 CU1 N/A N/A N/A N/A
    592678 6zif:A (2.2) BS06 CU1 N/A N/A N/A N/A
    592679 6zif:A (2.2) BS07 CU1 N/A N/A N/A N/A
    592680 6zif:A (2.2) BS08 CU1 N/A N/A N/A N/A
    592681 6zif:A (2.2) BS09 CU1 N/A N/A N/A N/A
    592682 6zif:A (2.2) BS10 CU1 N/A N/A N/A N/A
    592683 6zif:A (2.2) BS11 CU1 N/A N/A N/A N/A
    592684 6zif:A (2.2) BS12 CU1 N/A N/A N/A N/A
    592685 6zif:A (2.2) BS13 CU1 N/A N/A N/A N/A
    592686 6zif:A (2.2) BS14 CU1 N/A N/A N/A N/A
    592687 6zif:A (2.2) BS15 CU1 N/A N/A N/A N/A
    592688 6zif:A (2.2) BS16 ZN N/A N/A N/A N/A
    592689 6zif:B (2.2) BS01 ZN N/A N/A N/A N/A
    592690 6zif:B (2.2) BS02 CU1 N/A N/A N/A N/A
    592691 6zif:B (2.2) BS03 CU1 N/A N/A N/A N/A
    592692 6zif:B (2.2) BS04 CU1 N/A N/A N/A N/A
    592693 6zif:B (2.2) BS05 CU1 N/A N/A N/A N/A
    592694 6zif:B (2.2) BS06 CU1 N/A N/A N/A N/A
    592695 6zif:B (2.2) BS07 CU1 N/A N/A N/A N/A
    592696 6zif:B (2.2) BS08 CU1 N/A N/A N/A N/A
    592697 6zif:B (2.2) BS09 CU1 N/A N/A N/A N/A
    592698 6zif:B (2.2) BS10 CU1 N/A N/A N/A N/A
    592699 6zif:B (2.2) BS11 CU1 N/A N/A N/A N/A
    592700 6zif:B (2.2) BS12 CU1 N/A N/A N/A N/A
    592701 6zif:B (2.2) BS13 CU1 N/A N/A N/A N/A
    592702 6zif:B (2.2) BS14 CU1 N/A N/A N/A N/A
    592703 6zif:B (2.2) BS15 CU1 N/A N/A N/A N/A
    592704 6zif:C (2.2) BS01 CU1 N/A N/A N/A N/A
    592705 6zif:C (2.2) BS02 CU1 N/A N/A N/A N/A
    592706 6zif:C (2.2) BS03 CU1 N/A N/A N/A N/A
    592707 6zif:C (2.2) BS04 CU1 N/A N/A N/A N/A
    592708 6zif:C (2.2) BS05 CU1 N/A N/A N/A N/A
    592709 6zif:C (2.2) BS06 CU1 N/A N/A N/A N/A
    592710 6zif:C (2.2) BS07 CU1 N/A N/A N/A N/A
    592711 6zif:C (2.2) BS08 CU1 N/A N/A N/A N/A
    592712 6zif:C (2.2) BS09 CU1 N/A N/A N/A N/A
    592713 6zif:C (2.2) BS10 CU1 N/A N/A N/A N/A
    592714 6zif:C (2.2) BS11 CU1 N/A N/A N/A N/A
    592715 6zif:C (2.2) BS12 CU1 N/A N/A N/A N/A
    592716 6zif:C (2.2) BS13 CU1 N/A N/A N/A N/A
    592717 6zif:C (2.2) BS14 CU1 N/A N/A N/A N/A
    592718 6zif:C (2.2) BS15 CU1 N/A N/A N/A N/A
    592719 6zif:C (2.2) BS16 ZN N/A N/A N/A N/A
    592720 6zif:D (2.2) BS01 ZN N/A N/A N/A N/A
    592721 6zif:D (2.2) BS02 CU1 N/A N/A N/A N/A
    592722 6zif:D (2.2) BS03 CU1 N/A N/A N/A N/A
    592723 6zif:D (2.2) BS04 CU1 N/A N/A N/A N/A
    592724 6zif:D (2.2) BS05 CU1 N/A N/A N/A N/A
    592725 6zif:D (2.2) BS06 CU1 N/A N/A N/A N/A
    592726 6zif:D (2.2) BS07 CU1 N/A N/A N/A N/A
    592727 6zif:D (2.2) BS08 CU1 N/A N/A N/A N/A
    592728 6zif:D (2.2) BS09 CU1 N/A N/A N/A N/A
    592729 6zif:D (2.2) BS10 CU1 N/A N/A N/A N/A
    592730 6zif:D (2.2) BS11 CU1 N/A N/A N/A N/A
    592731 6zif:D (2.2) BS12 CU1 N/A N/A N/A N/A
    592732 6zif:D (2.2) BS13 CU1 N/A N/A N/A N/A
    592733 6zif:D (2.2) BS14 CU1 N/A N/A N/A N/A
    592734 6zif:D (2.2) BS15 CU1 N/A N/A N/A N/A
    592735 6zif:D (2.2) BS16 CU1 N/A N/A N/A N/A
    592736 6zii:A (2.5) BS01 MG ? GO:0000160 ... P58663 33638994
    592737 6zii:B (2.5) BS01 MG ? GO:0000160 ... P58663 33638994
    592738 6zij:A (1.6) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592739 6zij:A (1.6) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592740 6zij:A (1.6) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592741 6zij:A (1.6) BS04 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592742 6zij:A (1.6) BS05 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592743 6zij:B (1.6) BS01 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592744 6zij:B (1.6) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592745 6zij:B (1.6) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592746 6zij:B (1.6) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592747 6zij:B (1.6) BS05 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592748 6zij:C (1.6) BS01 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592749 6zij:C (1.6) BS02 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592750 6zij:C (1.6) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592751 6zij:C (1.6) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592752 6zij:C (1.6) BS05 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592753 6zij:C (1.6) BS06 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592754 6zij:D (1.6) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592755 6zij:D (1.6) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592756 6zij:D (1.6) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592757 6zij:D (1.6) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592758 6zij:D (1.6) BS05 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592759 6zij:D (1.6) BS06 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592760 6zij:E (1.6) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592761 6zij:E (1.6) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592762 6zij:E (1.6) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592763 6zij:E (1.6) BS04 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592764 6zij:E (1.6) BS05 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592765 6zij:F (1.6) BS01 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592766 6zij:F (1.6) BS02 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592767 6zij:F (1.6) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592768 6zij:F (1.6) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592769 6zij:F (1.6) BS05 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592770 6zin:AAA (2.639) BS01 Q6Q ? GO:0004930 ... P20789 33571132 BindingDB: Ki=2.6nM, IC50=82nM
    592771 6zio:A (1.55) BS01 GDP 3.6.5.2 GO:0000139 ... P01111 32779487
    592772 6zio:B (1.55) BS01 MG 3.6.5.2 GO:0000139 ... P01111 32779487
    592773 6zio:B (1.55) BS02 GDP 3.6.5.2 GO:0000139 ... P01111 32779487
    592774 6zip:A (2.05) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592775 6zip:A (2.05) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592776 6zip:A (2.05) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592777 6zip:A (2.05) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592778 6zip:A (2.05) BS05 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592779 6zip:B (2.05) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592780 6zip:B (2.05) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592781 6zip:B (2.05) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592782 6zip:C (2.05) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592783 6zip:C (2.05) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592784 6zip:C (2.05) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592785 6zip:C (2.05) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592786 6zip:C (2.05) BS05 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592787 6zip:D (2.05) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592788 6zip:D (2.05) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592789 6zip:D (2.05) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592790 6zip:D (2.05) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592791 6zip:E (2.05) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592792 6zip:E (2.05) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592793 6zip:E (2.05) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592794 6zip:F (2.05) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592795 6zip:F (2.05) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592796 6zip:F (2.05) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592797 6zip:F (2.05) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592798 6zip:G (2.05) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592799 6zip:G (2.05) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592800 6zip:G (2.05) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).