SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    592801 6zip:G (2.05) BS04 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592802 6zip:H (2.05) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592803 6zip:H (2.05) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592804 6zip:H (2.05) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592805 6zip:H (2.05) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592806 6zip:H (2.05) BS05 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592807 6zip:I (2.05) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592808 6zip:I (2.05) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592809 6zip:I (2.05) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592810 6zip:I (2.05) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592811 6zip:J (2.05) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592812 6zip:J (2.05) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592813 6zip:J (2.05) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592814 6zip:J (2.05) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592815 6zip:J (2.05) BS05 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592816 6zip:K (2.05) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592817 6zip:K (2.05) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592818 6zip:K (2.05) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592819 6zip:K (2.05) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592820 6zip:L (2.05) BS01 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592821 6zip:L (2.05) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592822 6zip:L (2.05) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592823 6zip:L (2.05) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592824 6zip:L (2.05) BS05 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 33870857
    592825 6zir:A (1.9) BS01 GDP 3.6.5.2 GO:0000139 ... P01111 32779487
    592826 6zir:A (1.9) BS02 EZZ 3.6.5.2 GO:0000139 ... P01111 32779487 MOAD: Kd=33uM
    592827 6zir:A (1.9) BS03 EZZ 3.6.5.2 GO:0000139 ... P01111 32779487 MOAD: Kd=33uM
    592828 6zis:A (1.73) BS01 GLC ? GO:0004930 ... A0A4P1LXE0
    O60894
    Q16602
    32558564
    592829 6zis:A (1.73) BS02 GLC ? GO:0004930 ... A0A4P1LXE0
    O60894
    Q16602
    32558564
    592830 6zis:A (1.73) BS03 3N6 ? GO:0004930 ... A0A4P1LXE0
    O60894
    Q16602
    32558564
    592831 6ziw:I (2.18) BS01 AGS 2.7.11.1 GO:0004672 ... Q9Y616 N/A
    592832 6zix:A (3.4) BS01 dna ? GO:0000160 ... P58663 33638994
    592833 6zix:A (3.4) BS02 dna ? GO:0000160 ... P58663 33638994
    592834 6zix:A (3.4) BS03 MG ? GO:0000160 ... P58663 33638994
    592835 6zix:A (3.4) BS04 BEF ? GO:0000160 ... P58663 33638994
    592836 6zix:B (3.4) BS01 dna ? GO:0000160 ... P58663 33638994
    592837 6zix:B (3.4) BS02 dna ? GO:0000160 ... P58663 33638994
    592838 6zix:B (3.4) BS03 MG ? GO:0000160 ... P58663 33638994
    592839 6zix:B (3.4) BS04 BEF ? GO:0000160 ... P58663 33638994
    592840 6ziy:1 (4.25) BS01 SF4 7.1.1.- GO:0005886 ... Q56222 32811817
    592841 6ziy:1 (4.25) BS02 FMN 7.1.1.- GO:0005886 ... Q56222 32811817
    592842 6ziy:1 (4.25) BS03 NAI 7.1.1.- GO:0005886 ... Q56222 32811817
    592843 6ziy:2 (4.25) BS01 FES 7.1.1.- GO:0003954 ... Q56221 32811817
    592844 6ziy:3 (4.25) BS01 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    592845 6ziy:3 (4.25) BS02 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    592846 6ziy:3 (4.25) BS03 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    592847 6ziy:3 (4.25) BS04 FES 7.1.1.- GO:0005886 ... Q56223 32811817
    592848 6ziy:6 (4.25) BS01 SF4 7.1.1.- GO:0005506 ... Q56218 32811817
    592849 6ziy:9 (4.25) BS01 SF4 7.1.1.- GO:0003954 ... Q56224 32811817
    592850 6ziy:9 (4.25) BS02 SF4 7.1.1.- GO:0003954 ... Q56224 32811817
    592851 6ziz:A (1.785) BS01 GTP 3.6.5.2 GO:0000139 ... P01111 32779487
    592852 6ziz:A (1.785) BS02 MG 3.6.5.2 GO:0000139 ... P01111 32779487
    592853 6ziz:A (1.785) BS03 EZZ 3.6.5.2 GO:0000139 ... P01111 32779487
    592854 6ziz:B (1.785) BS01 GTP 3.6.5.2 GO:0000139 ... P01111 32779487
    592855 6ziz:B (1.785) BS02 MG 3.6.5.2 GO:0000139 ... P01111 32779487
    592856 6ziz:B (1.785) BS03 EZZ 3.6.5.2 GO:0000139 ... P01111 32779487
    592857 6zj0:A (1.763) BS01 MG 3.6.5.2 GO:0003924 ... P01112 32779487
    592858 6zj0:A (1.763) BS02 EZZ 3.6.5.2 GO:0003924 ... P01112 32779487
    592859 6zj1:AAA (1.957) BS01 MMA 3.2.1.130 GO:0016798 ... Q5SRI9 33154157
    592860 6zj1:AAA (1.957) BS02 MAN 3.2.1.130 GO:0016798 ... Q5SRI9 33154157
    592861 6zj1:AAA (1.957) BS03 MAN 3.2.1.130 GO:0016798 ... Q5SRI9 33154157
    592862 6zj1:AAA (1.957) BS04 GLC 3.2.1.130 GO:0016798 ... Q5SRI9 33154157
    592863 6zj1:AAA (1.957) BS05 TEW 3.2.1.130 GO:0016798 ... Q5SRI9 33154157
    592864 6zj1:AAA (1.957) BS06 TEW 3.2.1.130 GO:0016798 ... Q5SRI9 33154157
    592865 6zj2:A (3.38) BS01 dna ? GO:0000160 ... P58663 33638994
    592866 6zj2:A (3.38) BS02 dna ? GO:0000160 ... P58663 33638994
    592867 6zj2:A (3.38) BS03 BEF ? GO:0000160 ... P58663 33638994
    592868 6zj2:A (3.38) BS04 MG ? GO:0000160 ... P58663 33638994
    592869 6zj2:B (3.38) BS01 dna ? GO:0000160 ... P58663 33638994
    592870 6zj2:B (3.38) BS02 dna ? GO:0000160 ... P58663 33638994
    592871 6zj2:B (3.38) BS03 BEF ? GO:0000160 ... P58663 33638994
    592872 6zj2:B (3.38) BS04 MG ? GO:0000160 ... P58663 33638994
    592873 6zj2:C (3.38) BS01 dna ? GO:0000160 ... P58663 33638994
    592874 6zj2:C (3.38) BS02 dna ? GO:0000160 ... P58663 33638994
    592875 6zj2:C (3.38) BS03 MG ? GO:0000160 ... P58663 33638994
    592876 6zj2:D (3.38) BS01 dna ? GO:0000160 ... P58663 33638994
    592877 6zj2:D (3.38) BS02 dna ? GO:0000160 ... P58663 33638994
    592878 6zj2:D (3.38) BS03 MG ? GO:0000160 ... P58663 33638994
    592879 6zj3:L1 (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592880 6zj3:L1 (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592881 6zj3:L1 (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592882 6zj3:L1 (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592883 6zj3:L2 (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592884 6zj3:L2 (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592885 6zj3:L2 (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592886 6zj3:L2 (3.15) BS04 ZN N/A GO:0003735 ... N/A 33091122
    592887 6zj3:L3 (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592888 6zj3:L3 (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592889 6zj3:L4 (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592890 6zj3:L4 (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592891 6zj3:L4 (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592892 6zj3:L4 (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592893 6zj3:L4 (3.15) BS05 ZN N/A GO:0003735 ... N/A 33091122
    592894 6zj3:L5 (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592895 6zj3:L5 (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592896 6zj3:L5 (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592897 6zj3:L5 (3.15) BS04 ZN N/A GO:0003735 ... N/A 33091122
    592898 6zj3:L6 (3.15) BS01 rna N/A N/A N/A 33091122
    592899 6zj3:L6 (3.15) BS02 rna N/A N/A N/A 33091122
    592900 6zj3:L7 (3.15) BS01 rna N/A N/A N/A 33091122
    592901 6zj3:L7 (3.15) BS02 rna N/A N/A N/A 33091122
    592902 6zj3:LP (3.15) BS01 rna N/A GO:0003723 ... N/A 33091122
    592903 6zj3:LP (3.15) BS02 rna N/A GO:0003723 ... N/A 33091122
    592904 6zj3:LP (3.15) BS03 rna N/A GO:0003723 ... N/A 33091122
    592905 6zj3:LP (3.15) BS04 rna N/A GO:0003723 ... N/A 33091122
    592906 6zj3:LP (3.15) BS05 rna N/A GO:0003723 ... N/A 33091122
    592907 6zj3:LQ (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592908 6zj3:LQ (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592909 6zj3:LQ (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592910 6zj3:LQ (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592911 6zj3:LQ (3.15) BS05 rna N/A GO:0003735 ... N/A 33091122
    592912 6zj3:LQ (3.15) BS06 rna N/A GO:0003735 ... N/A 33091122
    592913 6zj3:LQ (3.15) BS07 rna N/A GO:0003735 ... N/A 33091122
    592914 6zj3:LR (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592915 6zj3:LR (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592916 6zj3:LR (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592917 6zj3:LR (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592918 6zj3:LR (3.15) BS05 rna N/A GO:0003735 ... N/A 33091122
    592919 6zj3:LR (3.15) BS06 rna N/A GO:0003735 ... N/A 33091122
    592920 6zj3:LS (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592921 6zj3:LS (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592922 6zj3:LS (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592923 6zj3:LS (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592924 6zj3:LT (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592925 6zj3:LT (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592926 6zj3:LT (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592927 6zj3:LT (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592928 6zj3:LU (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592929 6zj3:LU (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592930 6zj3:LU (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592931 6zj3:LU (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592932 6zj3:LV (3.15) BS01 rna ? GO:0003723 ... Q4VH13 33091122
    592933 6zj3:LV (3.15) BS02 rna ? GO:0003723 ... Q4VH13 33091122
    592934 6zj3:LV (3.15) BS03 rna ? GO:0003723 ... Q4VH13 33091122
    592935 6zj3:LV (3.15) BS04 rna ? GO:0003723 ... Q4VH13 33091122
    592936 6zj3:LV (3.15) BS05 rna ? GO:0003723 ... Q4VH13 33091122
    592937 6zj3:LW (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592938 6zj3:LW (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592939 6zj3:LW (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592940 6zj3:LW (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592941 6zj3:LW (3.15) BS05 rna N/A GO:0003735 ... N/A 33091122
    592942 6zj3:LW (3.15) BS06 rna N/A GO:0003735 ... N/A 33091122
    592943 6zj3:LW (3.15) BS07 rna N/A GO:0003735 ... N/A 33091122
    592944 6zj3:LX (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592945 6zj3:LX (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592946 6zj3:LX (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592947 6zj3:LX (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592948 6zj3:LX (3.15) BS05 rna N/A GO:0003735 ... N/A 33091122
    592949 6zj3:LY (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592950 6zj3:LY (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592951 6zj3:LY (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592952 6zj3:LZ (3.15) BS01 rna N/A GO:0003723 ... N/A 33091122
    592953 6zj3:LZ (3.15) BS02 rna N/A GO:0003723 ... N/A 33091122
    592954 6zj3:LZ (3.15) BS03 rna N/A GO:0003723 ... N/A 33091122
    592955 6zj3:LZ (3.15) BS04 rna N/A GO:0003723 ... N/A 33091122
    592956 6zj3:La (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592957 6zj3:La (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592958 6zj3:La (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592959 6zj3:La (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592960 6zj3:La (3.15) BS05 rna N/A GO:0003735 ... N/A 33091122
    592961 6zj3:Lb (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592962 6zj3:Lb (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592963 6zj3:Lb (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592964 6zj3:Lb (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592965 6zj3:Lb (3.15) BS05 rna N/A GO:0003735 ... N/A 33091122
    592966 6zj3:Lb (3.15) BS06 rna N/A GO:0003735 ... N/A 33091122
    592967 6zj3:Lb (3.15) BS07 rna N/A GO:0003735 ... N/A 33091122
    592968 6zj3:Lc (3.15) BS01 rna ? GO:0003735 ... Q39724 33091122
    592969 6zj3:Lc (3.15) BS02 rna ? GO:0003735 ... Q39724 33091122
    592970 6zj3:Lc (3.15) BS03 rna ? GO:0003735 ... Q39724 33091122
    592971 6zj3:Lc (3.15) BS04 rna ? GO:0003735 ... Q39724 33091122
    592972 6zj3:Ld (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592973 6zj3:Ld (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592974 6zj3:Ld (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592975 6zj3:Le (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592976 6zj3:Le (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592977 6zj3:Le (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592978 6zj3:Le (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592979 6zj3:Lf (3.15) BS01 rna N/A GO:0003723 ... N/A 33091122
    592980 6zj3:Lf (3.15) BS02 rna N/A GO:0003723 ... N/A 33091122
    592981 6zj3:Lf (3.15) BS03 rna N/A GO:0003723 ... N/A 33091122
    592982 6zj3:Lf (3.15) BS04 rna N/A GO:0003723 ... N/A 33091122
    592983 6zj3:Lf (3.15) BS05 rna N/A GO:0003723 ... N/A 33091122
    592984 6zj3:Lf (3.15) BS06 rna N/A GO:0003723 ... N/A 33091122
    592985 6zj3:Lg (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592986 6zj3:Lg (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592987 6zj3:Lg (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592988 6zj3:Lg (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592989 6zj3:Lh (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592990 6zj3:Lh (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592991 6zj3:Lh (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592992 6zj3:Lh (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592993 6zj3:Li (3.15) BS01 rna N/A GO:0003735 ... N/A 33091122
    592994 6zj3:Li (3.15) BS02 rna N/A GO:0003735 ... N/A 33091122
    592995 6zj3:Li (3.15) BS03 rna N/A GO:0003735 ... N/A 33091122
    592996 6zj3:Li (3.15) BS04 rna N/A GO:0003735 ... N/A 33091122
    592997 6zj3:Li (3.15) BS05 rna N/A GO:0003735 ... N/A 33091122
    592998 6zj3:Li (3.15) BS06 rna N/A GO:0003735 ... N/A 33091122
    592999 6zj3:Li (3.15) BS07 rna N/A GO:0003735 ... N/A 33091122
    593000 6zj3:Li (3.15) BS08 rna N/A GO:0003735 ... N/A 33091122

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).