SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2960 2961 2962 2963 2964 2965 2966 2967 2968 2969 2970 2971 2972 2973 2974 2975 2976 2977 2978 2979 2980 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    593801 6zlw:f (2.6) BS01 rna ? GO:0002181 ... P62273 32680882
    593802 6zlw:f (2.6) BS02 ZN ? GO:0002181 ... P62273 32680882
    593803 6zlw:g (2.6) BS01 rna ? GO:0002181 ... P62979 32680882
    593804 6zlw:i (2.6) BS01 rna 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTD1 32680882
    593805 6zlw:j (2.6) BS01 rna ? GO:0001891 ... P63244 32680882
    593806 6zly:A (1.79) BS01 QMH ? GO:0003677 ... P37231 33142057 MOAD: Kd=94nM
    593807 6zlz:A (3.52) BS01 CA ? GO:0005198 ... B0G0W3 32699083
    593808 6zlz:B (3.52) BS01 CA ? GO:0005198 ... B0G0W3 32699083
    593809 6zlz:C (3.52) BS01 CA ? GO:0005198 ... B0G0W3 32699083
    593810 6zlz:D (3.52) BS01 CA ? GO:0005198 ... B0G0W3 32699083
    593811 6zlz:E (3.52) BS01 CA ? GO:0005198 ... B0G0W3 32699083
    593812 6zlz:F (3.52) BS01 CA ? GO:0005198 ... B0G0W3 32699083
    593813 6zm0:AAA (1.471) BS01 MG ? GO:0008360 ... Q9HVU1 34016967
    593814 6zm2:A (2.1) BS01 rna 3.6.4.13 GO:0003676 ... G0SEG4 33825710
    593815 6zm2:A (2.1) BS02 BEF 3.6.4.13 GO:0003676 ... G0SEG4 33825710
    593816 6zm2:A (2.1) BS03 ADP 3.6.4.13 GO:0003676 ... G0SEG4 33825710
    593817 6zm2:A (2.1) BS04 POL 3.6.4.13 GO:0003676 ... G0SEG4 33825710
    593818 6zm2:A (2.1) BS05 POL 3.6.4.13 GO:0003676 ... G0SEG4 33825710
    593819 6zm2:A (2.1) BS06 POL 3.6.4.13 GO:0003676 ... G0SEG4 33825710
    593820 6zm2:A (2.1) BS07 POL 3.6.4.13 GO:0003676 ... G0SEG4 33825710
    593821 6zm2:A (2.1) BS08 POL 3.6.4.13 GO:0003676 ... G0SEG4 33825710
    593822 6zm5:0 (2.89) BS01 rna ? GO:0003723 ... Q9BYC8 33602856
    593823 6zm5:0 (2.89) BS02 ZN ? GO:0003723 ... Q9BYC8 33602856
    593824 6zm5:1 (2.89) BS01 rna ? GO:0003735 ... O75394 33602856
    593825 6zm5:2 (2.89) BS01 rna ? GO:0003735 ... Q9BQ48 33602856
    593826 6zm5:3 (2.89) BS01 rna ? GO:0003735 ... Q9NZE8 33602856
    593827 6zm5:4 (2.89) BS01 rna ? GO:0003735 ... Q9P0J6 33602856
    593828 6zm5:4 (2.89) BS02 ZN ? GO:0003735 ... Q9P0J6 33602856
    593829 6zm5:5 (2.89) BS01 rna ? GO:0003723 ... Q9BZE1 33602856
    593830 6zm5:6 (2.89) BS01 rna ? GO:0005515 ... Q96DV4 33602856
    593831 6zm5:6 (2.89) BS02 rna ? GO:0005515 ... Q96DV4 33602856
    593832 6zm5:8 (2.89) BS01 rna ? GO:0003723 ... Q9NQ50 33602856
    593833 6zm5:8 (2.89) BS02 rna ? GO:0003723 ... Q9NQ50 33602856
    593834 6zm5:8 (2.89) BS03 rna ? GO:0003723 ... Q9NQ50 33602856
    593835 6zm5:8 (2.89) BS04 rna ? GO:0003723 ... Q9NQ50 33602856
    593836 6zm5:9 (2.89) BS01 rna ? GO:0003723 ... Q8IXM3 33602856
    593837 6zm5:A0 (2.89) BS01 rna ? GO:0003735 ... P82930 33602856
    593838 6zm5:A2 (2.89) BS01 rna ? GO:0001650 ... Q96BP2 33602856
    593839 6zm5:A3 (2.89) BS01 rna ? GO:0005515 ... Q9NWT8 33602856
    593840 6zm5:A3 (2.89) BS02 rna ? GO:0005515 ... Q9NWT8 33602856
    593841 6zm5:A4 (2.89) BS01 rna ? GO:0003723 ... Q96EY7 33602856
    593842 6zm5:AB (2.89) BS01 rna ? GO:0003735 ... Q9Y399 33602856
    593843 6zm5:AB (2.89) BS02 MG ? GO:0003735 ... Q9Y399 33602856
    593844 6zm5:AC (2.89) BS01 rna ? GO:0003723 ... Q96EL2 33602856
    593845 6zm5:AD (2.89) BS01 rna ? GO:0003723 ... P82675 33602856
    593846 6zm5:AD (2.89) BS02 rna ? GO:0003723 ... P82675 33602856
    593847 6zm5:AE (2.89) BS01 rna ? GO:0003735 ... P82932 33602856
    593848 6zm5:AF (2.89) BS01 rna ? GO:0000028 ... Q9Y2R9 33602856
    593849 6zm5:AG (2.89) BS01 rna ? GO:0003723 ... P82933 33602856
    593850 6zm5:AH (2.89) BS01 rna ? GO:0005739 ... P82664 33602856
    593851 6zm5:AI (2.89) BS01 rna ? GO:0003723 ... P82912 33602856
    593852 6zm5:AJ (2.89) BS01 rna ? GO:0003723 ... O15235 33602856
    593853 6zm5:AK (2.89) BS01 rna ? GO:0003723 ... O60783 33602856
    593854 6zm5:AL (2.89) BS01 rna ? GO:0003723 ... P82914 33602856
    593855 6zm5:AM (2.89) BS01 rna ? GO:0003735 ... Q9Y3D3 33602856
    593856 6zm5:AN (2.89) BS01 rna ? GO:0003735 ... Q9Y2R5 33602856
    593857 6zm5:AO (2.89) BS01 rna ? GO:0003735 ... Q9Y676 33602856
    593858 6zm5:AO (2.89) BS02 ZN ? GO:0003735 ... Q9Y676 33602856
    593859 6zm5:AP (2.89) BS01 rna ? GO:0003735 ... Q9Y3D5 33602856
    593860 6zm5:AP (2.89) BS02 FES ? GO:0003735 ... Q9Y3D5 33602856
    593861 6zm5:AQ (2.89) BS01 rna ? GO:0003723 ... P82921 33602856
    593862 6zm5:AS (2.89) BS01 rna ? GO:0003723 ... Q9Y3D9 33602856
    593863 6zm5:AT (2.89) BS01 rna ? GO:0003735 ... P82663 33602856
    593864 6zm5:AT (2.89) BS02 FES ? GO:0003735 ... P82663 33602856
    593865 6zm5:AU (2.89) BS01 rna ? GO:0003723 ... Q9BYN8 33602856
    593866 6zm5:AV (2.89) BS01 rna ? GO:0000049 ... Q92552 33602856
    593867 6zm5:AX (2.89) BS01 rna ? GO:0003723 ... P51398 33602856
    593868 6zm5:AX (2.89) BS02 ATP ? GO:0003723 ... P51398 33602856
    593869 6zm5:AX (2.89) BS03 GTP ? GO:0003723 ... P51398 33602856
    593870 6zm5:AZ (2.89) BS01 rna ? GO:0003735 ... Q9Y291 33602856
    593871 6zm5:D (2.89) BS01 rna ? GO:0003723 ... Q5T653 33602856
    593872 6zm5:D (2.89) BS02 MG ? GO:0003723 ... Q5T653 33602856
    593873 6zm5:E (2.89) BS01 rna ? GO:0003723 ... P09001 33602856
    593874 6zm5:F (2.89) BS01 rna ? GO:0003723 ... Q9BYD3 33602856
    593875 6zm5:H (2.89) BS01 rna ? GO:0003723 ... Q9BYD2 33602856
    593876 6zm5:I (2.89) BS01 rna ? GO:0003723 ... Q7Z7H8 33602856
    593877 6zm5:J (2.89) BS01 rna ? GO:0003723 ... Q9Y3B7 33602856
    593878 6zm5:K (2.89) BS01 rna ? GO:0003723 ... Q9BYD1 33602856
    593879 6zm5:L (2.89) BS01 rna ? GO:0003723 ... Q6P1L8 33602856
    593880 6zm5:M (2.89) BS01 rna ? GO:0003723 ... Q9P015 33602856
    593881 6zm5:N (2.89) BS01 rna ? GO:0003735 ... Q9NX20 33602856
    593882 6zm5:N (2.89) BS02 rna ? GO:0003735 ... Q9NX20 33602856
    593883 6zm5:O (2.89) BS01 rna ? GO:0003735 ... Q9NRX2 33602856
    593884 6zm5:P (2.89) BS01 rna ? GO:0003723 ... Q9H0U6 33602856
    593885 6zm5:P (2.89) BS02 rna ? GO:0003723 ... Q9H0U6 33602856
    593886 6zm5:Q (2.89) BS01 rna ? GO:0003735 ... P49406 33602856
    593887 6zm5:R (2.89) BS01 rna ? GO:0003723 ... Q9BYC9 33602856
    593888 6zm5:S (2.89) BS01 rna ? GO:0003723 ... Q7Z2W9 33602856
    593889 6zm5:T (2.89) BS01 rna ? GO:0003723 ... Q9NWU5 33602856
    593890 6zm5:U (2.89) BS01 rna ? GO:0001650 ... Q16540 33602856
    593891 6zm5:V (2.89) BS01 rna ? GO:0003723 ... Q96A35 33602856
    593892 6zm5:W (2.89) BS01 rna ? GO:0003723 ... Q9P0M9 33602856
    593893 6zm5:X (2.89) BS01 rna ? GO:0003723 ... Q13084 33602856
    593894 6zm5:Y (2.89) BS01 rna ? GO:0003735 ... Q9HD33 33602856
    593895 6zm5:Z (2.89) BS01 rna ? GO:0003735 ... Q8TCC3 33602856
    593896 6zm5:a (2.89) BS01 rna ? GO:0003723 ... Q9Y6G3 33602856
    593897 6zm5:b (2.89) BS01 rna ? GO:0003723 ... Q8N983 33602856
    593898 6zm5:c (2.89) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 33602856
    593899 6zm5:d (2.89) BS01 rna ? GO:0003723 ... Q9BRJ2 33602856
    593900 6zm5:e (2.89) BS01 rna ? GO:0003735 ... Q9H2W6 33602856
    593901 6zm5:f (2.89) BS01 rna ? GO:0005515 ... Q96GC5 33602856
    593902 6zm5:f (2.89) BS02 rna ? GO:0005515 ... Q96GC5 33602856
    593903 6zm5:g (2.89) BS01 rna ? GO:0003735 ... Q13405 33602856
    593904 6zm5:i (2.89) BS01 rna ? GO:0003735 ... Q4U2R6 33602856
    593905 6zm5:j (2.89) BS01 rna ? GO:0003735 ... Q86TS9 33602856
    593906 6zm5:k (2.89) BS01 rna ? GO:0005515 ... Q96EL3 33602856
    593907 6zm5:l (2.89) BS01 rna ? GO:0003723 ... Q6P161 33602856
    593908 6zm5:o (2.89) BS01 rna ? GO:0003735 ... Q9BQC6 33602856
    593909 6zm5:q (2.89) BS01 rna ? GO:0005515 ... Q8TAE8 33602856
    593910 6zm5:r (2.89) BS01 rna ? GO:0003735 ... Q9NVS2 33602856
    593911 6zm5:r (2.89) BS02 FES ? GO:0003735 ... Q9NVS2 33602856
    593912 6zm5:s (2.89) BS01 rna ? GO:0003723 ... Q9NP92 33602856
    593913 6zm5:u (2.89) BS01 rna ? GO:0005515 ... Q15070 33602856
    593914 6zm5:v (2.89) BS01 rna N/A GO:0050825 ... N/A 33602856
    593915 6zm6:0 (2.59) BS01 rna ? GO:0003723 ... Q9BYC8 33602856
    593916 6zm6:0 (2.59) BS02 ZN ? GO:0003723 ... Q9BYC8 33602856
    593917 6zm6:1 (2.59) BS01 rna ? GO:0003735 ... O75394 33602856
    593918 6zm6:2 (2.59) BS01 rna ? GO:0003735 ... Q9BQ48 33602856
    593919 6zm6:3 (2.59) BS01 rna ? GO:0003735 ... Q9NZE8 33602856
    593920 6zm6:4 (2.59) BS01 rna ? GO:0003735 ... Q9P0J6 33602856
    593921 6zm6:4 (2.59) BS02 ZN ? GO:0003735 ... Q9P0J6 33602856
    593922 6zm6:5 (2.59) BS01 rna ? GO:0003723 ... Q9BZE1 33602856
    593923 6zm6:6 (2.59) BS01 rna ? GO:0005515 ... Q96DV4 33602856
    593924 6zm6:6 (2.59) BS02 rna ? GO:0005515 ... Q96DV4 33602856
    593925 6zm6:8 (2.59) BS01 rna ? GO:0003723 ... Q9NQ50 33602856
    593926 6zm6:8 (2.59) BS02 rna ? GO:0003723 ... Q9NQ50 33602856
    593927 6zm6:8 (2.59) BS03 rna ? GO:0003723 ... Q9NQ50 33602856
    593928 6zm6:8 (2.59) BS04 rna ? GO:0003723 ... Q9NQ50 33602856
    593929 6zm6:9 (2.59) BS01 rna ? GO:0003723 ... Q8IXM3 33602856
    593930 6zm6:A0 (2.59) BS01 rna ? GO:0003735 ... P82930 33602856
    593931 6zm6:A2 (2.59) BS01 rna ? GO:0001650 ... Q96BP2 33602856
    593932 6zm6:A3 (2.59) BS01 rna ? GO:0005515 ... Q9NWT8 33602856
    593933 6zm6:A3 (2.59) BS02 rna ? GO:0005515 ... Q9NWT8 33602856
    593934 6zm6:A4 (2.59) BS01 rna ? GO:0003723 ... Q96EY7 33602856
    593935 6zm6:AB (2.59) BS01 rna ? GO:0003735 ... Q9Y399 33602856
    593936 6zm6:AB (2.59) BS02 MG ? GO:0003735 ... Q9Y399 33602856
    593937 6zm6:AC (2.59) BS01 rna ? GO:0003723 ... Q96EL2 33602856
    593938 6zm6:AD (2.59) BS01 rna ? GO:0003723 ... P82675 33602856
    593939 6zm6:AD (2.59) BS02 rna ? GO:0003723 ... P82675 33602856
    593940 6zm6:AE (2.59) BS01 rna ? GO:0003735 ... P82932 33602856
    593941 6zm6:AF (2.59) BS01 rna ? GO:0000028 ... Q9Y2R9 33602856
    593942 6zm6:AF (2.59) BS02 rna ? GO:0000028 ... Q9Y2R9 33602856
    593943 6zm6:AG (2.59) BS01 rna ? GO:0003723 ... P82933 33602856
    593944 6zm6:AG (2.59) BS02 rna ? GO:0003723 ... P82933 33602856
    593945 6zm6:AH (2.59) BS01 rna ? GO:0005739 ... P82664 33602856
    593946 6zm6:AI (2.59) BS01 rna ? GO:0003723 ... P82912 33602856
    593947 6zm6:AJ (2.59) BS01 rna ? GO:0003723 ... O15235 33602856
    593948 6zm6:AK (2.59) BS01 rna ? GO:0003723 ... O60783 33602856
    593949 6zm6:AL (2.59) BS01 rna ? GO:0003723 ... P82914 33602856
    593950 6zm6:AM (2.59) BS01 rna ? GO:0003735 ... Q9Y3D3 33602856
    593951 6zm6:AN (2.59) BS01 rna ? GO:0003735 ... Q9Y2R5 33602856
    593952 6zm6:AO (2.59) BS01 rna ? GO:0003735 ... Q9Y676 33602856
    593953 6zm6:AO (2.59) BS02 ZN ? GO:0003735 ... Q9Y676 33602856
    593954 6zm6:AP (2.59) BS01 rna ? GO:0003735 ... Q9Y3D5 33602856
    593955 6zm6:AP (2.59) BS02 FES ? GO:0003735 ... Q9Y3D5 33602856
    593956 6zm6:AQ (2.59) BS01 rna ? GO:0003723 ... P82921 33602856
    593957 6zm6:AS (2.59) BS01 rna ? GO:0003723 ... Q9Y3D9 33602856
    593958 6zm6:AT (2.59) BS01 rna ? GO:0003735 ... P82663 33602856
    593959 6zm6:AT (2.59) BS02 FES ? GO:0003735 ... P82663 33602856
    593960 6zm6:AU (2.59) BS01 rna ? GO:0003723 ... Q9BYN8 33602856
    593961 6zm6:AV (2.59) BS01 rna ? GO:0000049 ... Q92552 33602856
    593962 6zm6:AX (2.59) BS01 rna ? GO:0003723 ... P51398 33602856
    593963 6zm6:AX (2.59) BS02 ATP ? GO:0003723 ... P51398 33602856
    593964 6zm6:AX (2.59) BS03 GTP ? GO:0003723 ... P51398 33602856
    593965 6zm6:AZ (2.59) BS01 rna ? GO:0003735 ... Q9Y291 33602856
    593966 6zm6:D (2.59) BS01 rna ? GO:0003723 ... Q5T653 33602856
    593967 6zm6:D (2.59) BS02 MG ? GO:0003723 ... Q5T653 33602856
    593968 6zm6:E (2.59) BS01 rna ? GO:0003723 ... P09001 33602856
    593969 6zm6:F (2.59) BS01 rna ? GO:0003723 ... Q9BYD3 33602856
    593970 6zm6:H (2.59) BS01 rna ? GO:0003723 ... Q9BYD2 33602856
    593971 6zm6:I (2.59) BS01 rna ? GO:0003723 ... Q7Z7H8 33602856
    593972 6zm6:J (2.59) BS01 rna ? GO:0003723 ... Q9Y3B7 33602856
    593973 6zm6:K (2.59) BS01 rna ? GO:0003723 ... Q9BYD1 33602856
    593974 6zm6:L (2.59) BS01 rna ? GO:0003723 ... Q6P1L8 33602856
    593975 6zm6:M (2.59) BS01 rna ? GO:0003723 ... Q9P015 33602856
    593976 6zm6:N (2.59) BS01 rna ? GO:0003735 ... Q9NX20 33602856
    593977 6zm6:N (2.59) BS02 rna ? GO:0003735 ... Q9NX20 33602856
    593978 6zm6:O (2.59) BS01 rna ? GO:0003735 ... Q9NRX2 33602856
    593979 6zm6:P (2.59) BS01 rna ? GO:0003723 ... Q9H0U6 33602856
    593980 6zm6:P (2.59) BS02 rna ? GO:0003723 ... Q9H0U6 33602856
    593981 6zm6:Q (2.59) BS01 rna ? GO:0003735 ... P49406 33602856
    593982 6zm6:R (2.59) BS01 rna ? GO:0003723 ... Q9BYC9 33602856
    593983 6zm6:S (2.59) BS01 rna ? GO:0003723 ... Q7Z2W9 33602856
    593984 6zm6:T (2.59) BS01 rna ? GO:0003723 ... Q9NWU5 33602856
    593985 6zm6:U (2.59) BS01 rna ? GO:0001650 ... Q16540 33602856
    593986 6zm6:V (2.59) BS01 rna ? GO:0003723 ... Q96A35 33602856
    593987 6zm6:W (2.59) BS01 rna ? GO:0003723 ... Q9P0M9 33602856
    593988 6zm6:W (2.59) BS02 rna ? GO:0003723 ... Q9P0M9 33602856
    593989 6zm6:X (2.59) BS01 rna ? GO:0003723 ... Q13084 33602856
    593990 6zm6:Y (2.59) BS01 rna ? GO:0003735 ... Q9HD33 33602856
    593991 6zm6:Z (2.59) BS01 rna ? GO:0003735 ... Q8TCC3 33602856
    593992 6zm6:a (2.59) BS01 rna ? GO:0003723 ... Q9Y6G3 33602856
    593993 6zm6:b (2.59) BS01 rna ? GO:0003723 ... Q8N983 33602856
    593994 6zm6:c (2.59) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 33602856
    593995 6zm6:d (2.59) BS01 rna ? GO:0003723 ... Q9BRJ2 33602856
    593996 6zm6:e (2.59) BS01 rna ? GO:0003735 ... Q9H2W6 33602856
    593997 6zm6:f (2.59) BS01 rna ? GO:0005515 ... Q96GC5 33602856
    593998 6zm6:f (2.59) BS02 rna ? GO:0005515 ... Q96GC5 33602856
    593999 6zm6:g (2.59) BS01 rna ? GO:0003735 ... Q13405 33602856
    594000 6zm6:i (2.59) BS01 rna ? GO:0003735 ... Q4U2R6 33602856

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).