SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    594601 6zmw:q (3.7) BS01 rna ? GO:0000049 ... P47813 32883864
    594602 6zmw:r (3.7) BS01 rna ? GO:0000423 ... P05198 32883864
    594603 6zmw:s (3.7) BS01 rna ? GO:0001701 ... P20042 32883864
    594604 6zmw:t (3.7) BS01 rna 3.6.5.3 GO:0000049 ... P41091 32883864
    594605 6zmw:y (3.7) BS01 rna ? GO:0001732 ... Q99613 32883864
    594606 6zmw:z (3.7) BS01 rna ? GO:0001732 ... O75822 32883864
    594607 6zmx:A (1.389) BS01 HEM ? GO:0004601 ... P81023 33950023
    594608 6zmx:B (1.389) BS01 HEM ? GO:0004601 ... P84479 33950023
    594609 6zmx:C (1.389) BS01 HEM ? GO:0004601 ... P81023 33950023
    594610 6zmx:D (1.389) BS01 HEM ? GO:0004601 ... P84479 33950023
    594611 6zmy:A (1.655) BS01 HEM ? GO:0004601 ... P81023 33950023
    594612 6zmy:B (1.655) BS01 HEM ? GO:0005833 ... G1U9Q8 33950023
    594613 6zmy:C (1.655) BS01 HEM ? GO:0004601 ... P81023 33950023
    594614 6zmy:D (1.655) BS01 HEM ? GO:0005833 ... G1U9Q8 33950023
    594615 6zmz:AAA (1.9) BS01 UPG ? GO:0006006 ... F2L613 32953231
    594616 6zn0:A (1.59) BS01 NTN 2.7.11.11 GO:0000287 ... P25321 33021032
    594617 6zn0:A (1.59) BS02 NTN 2.7.11.11 GO:0000287 ... P25321 33021032
    594618 6zn1:AAA (1.75) BS01 GLC ? GO:0006006 ... F2L613 32953231
    594619 6zn1:AAA (1.75) BS02 GIV ? GO:0006006 ... F2L613 32953231
    594620 6zn2:A (4.3) BS01 peptide 1.14.16.2 GO:0004497 ... P07101 35013193
    594621 6zn2:A (4.3) BS02 LDP 1.14.16.2 GO:0004497 ... P07101 35013193
    594622 6zn2:A (4.3) BS03 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    594623 6zn2:C (4.3) BS01 peptide 1.14.16.2 GO:0004497 ... P07101 35013193
    594624 6zn2:C (4.3) BS02 LDP 1.14.16.2 GO:0004497 ... P07101 35013193
    594625 6zn2:C (4.3) BS03 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    594626 6zn2:E (4.3) BS01 peptide 1.14.16.2 GO:0004497 ... P07101 35013193
    594627 6zn2:E (4.3) BS02 LDP 1.14.16.2 GO:0004497 ... P07101 35013193
    594628 6zn2:E (4.3) BS03 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    594629 6zn2:G (4.3) BS01 peptide 1.14.16.2 GO:0004497 ... P07101 35013193
    594630 6zn2:G (4.3) BS02 LDP 1.14.16.2 GO:0004497 ... P07101 35013193
    594631 6zn2:G (4.3) BS03 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    594632 6zn4:A (1.679) BS01 MG 1.1.1.40 GO:0004470 ... Q6MM14
    Q6MM15
    33623032
    594633 6zn4:B (1.679) BS01 MG 1.1.1.40 GO:0004470 ... Q6MM14
    Q6MM15
    33623032
    594634 6zn5:B (3.2) BS01 rna ? GO:0003735 ... P08865 32680882
    594635 6zn5:C (3.2) BS01 rna ? GO:0003735 ... P61247 32680882
    594636 6zn5:D (3.2) BS01 rna ? GO:0003723 ... P15880 32680882
    594637 6zn5:D (3.2) BS02 peptide ? GO:0003723 ... P15880 32680882
    594638 6zn5:E (3.2) BS01 rna ? GO:0002181 ... P62701 32680882
    594639 6zn5:F (3.2) BS01 rna 4.2.99.18 GO:0000977 ... P23396 32680882
    594640 6zn5:F (3.2) BS02 peptide 4.2.99.18 GO:0000977 ... P23396 32680882
    594641 6zn5:G (3.2) BS01 rna ? GO:0000082 ... P62753 32680882
    594642 6zn5:H (3.2) BS01 rna ? GO:0001843 ... P62081 32680882
    594643 6zn5:I (3.2) BS01 rna ? GO:0000462 ... P62241 32680882
    594644 6zn5:J (3.2) BS01 rna ? GO:0002181 ... P46781 32680882
    594645 6zn5:K (3.2) BS01 rna ? GO:0000028 ... P46782 32680882
    594646 6zn5:L (3.2) BS01 rna ? GO:0002181 ... P62280 32680882
    594647 6zn5:M (3.2) BS01 rna ? N/A P46783 32680882
    594648 6zn5:N (3.2) BS01 rna ? GO:0002181 ... P62277 32680882
    594649 6zn5:O (3.2) BS01 rna ? GO:0002181 ... P25398 32680882
    594650 6zn5:P (3.2) BS01 rna ? GO:0003735 ... P62263 32680882
    594651 6zn5:Q (3.2) BS01 rna ? GO:0003723 ... P62841 32680882
    594652 6zn5:R (3.2) BS01 rna ? GO:0000462 ... P62249 32680882
    594653 6zn5:S (3.2) BS01 rna ? GO:0002181 ... P08708 32680882
    594654 6zn5:T (3.2) BS01 rna ? GO:0002181 ... P62269 32680882
    594655 6zn5:U (3.2) BS01 rna ? GO:0000028 ... P39019 32680882
    594656 6zn5:V (3.2) BS01 rna ? GO:0003723 ... P60866 32680882
    594657 6zn5:W (3.2) BS01 rna ? GO:0002181 ... P62244 32680882
    594658 6zn5:X (3.2) BS01 rna ? GO:0002181 ... P62266 32680882
    594659 6zn5:Y (3.2) BS01 rna ? GO:0002181 ... P62847 32680882
    594660 6zn5:a (3.2) BS01 rna ? N/A P62851 32680882
    594661 6zn5:b (3.2) BS01 rna ? GO:0000028 ... P42677 32680882
    594662 6zn5:c (3.2) BS01 rna ? GO:0003735 ... P62854 32680882
    594663 6zn5:c (3.2) BS02 ZN ? GO:0003735 ... P62854 32680882
    594664 6zn5:d (3.2) BS01 rna ? GO:0003735 ... P62857 32680882
    594665 6zn5:e (3.2) BS01 rna ? GO:0003735 ... P62861 32680882
    594666 6zn5:f (3.2) BS01 rna ? GO:0002181 ... P62273 32680882
    594667 6zn5:f (3.2) BS02 ZN ? GO:0002181 ... P62273 32680882
    594668 6zn5:g (3.2) BS01 rna ? GO:0003735 ... P62979 32680882
    594669 6zn5:g (3.2) BS02 ZN ? GO:0003735 ... P62979 32680882
    594670 6zn5:j (3.2) BS01 rna ? GO:0001891 ... P63244 32680882
    594671 6zn5:u (3.2) BS01 rna ? GO:0000462 ... Q2NL82 32680882
    594672 6zn6:A (2.02) BS01 QMT ? GO:0006338 ... Q86U86 33216538
    594673 6zn6:B (2.02) BS01 QMT ? GO:0006338 ... Q86U86 33216538
    594674 6zn7:A (1.67) BS01 MG 1.1.1.40 GO:0004470 ... Q6MM14
    Q6MM15
    33623032
    594675 6zn7:A (1.67) BS02 NAP 1.1.1.40 GO:0004470 ... Q6MM14
    Q6MM15
    33623032
    594676 6zn7:B (1.67) BS01 MG 1.1.1.40 GO:0004470 ... Q6MM14
    Q6MM15
    33623032
    594677 6zn7:B (1.67) BS02 NAP 1.1.1.40 GO:0004470 ... Q6MM14
    Q6MM15
    33623032
    594678 6znc:A (1.64) BS01 dna ? GO:0000976 ... P04637 34862374
    594679 6znc:A (1.64) BS02 ZN ? GO:0000976 ... P04637 34862374
    594680 6znc:A (1.64) BS03 QNN ? GO:0000976 ... P04637 34862374
    594681 6znc:A (1.64) BS04 QNN ? GO:0000976 ... P04637 34862374
    594682 6znd:A (2.35) BS01 ZN 3.1.4.17 GO:0004114 ... O00408 33105987
    594683 6znd:A (2.35) BS02 QMZ 3.1.4.17 GO:0004114 ... O00408 33105987 MOAD: ic50=66nM
    594684 6znd:B (2.35) BS01 ZN 3.1.4.17 GO:0004114 ... O00408 33105987
    594685 6znd:B (2.35) BS02 QMZ 3.1.4.17 GO:0004114 ... O00408 33105987 MOAD: ic50=66nM
    594686 6zng:A (2.72) BS01 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    594687 6zng:A (2.72) BS02 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    594688 6zng:B (2.72) BS01 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    594689 6zng:B (2.72) BS02 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    594690 6zng:C (2.72) BS01 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    594691 6zng:C (2.72) BS02 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    594692 6zng:D (2.72) BS01 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    594693 6zng:D (2.72) BS02 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    594694 6zng:E (2.72) BS01 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    594695 6zng:E (2.72) BS02 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    594696 6zng:F (2.72) BS01 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    594697 6zng:F (2.72) BS02 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    594698 6znl:A (3.8) BS01 ADP ? N/A F2Z5G5 33734450
    594699 6znl:B (3.8) BS01 ADP ? N/A F2Z5G5 33734450
    594700 6znl:C (3.8) BS01 ADP ? N/A F2Z5G5 33734450
    594701 6znl:D (3.8) BS01 ADP ? N/A F2Z5G5 33734450
    594702 6znl:E (3.8) BS01 ADP ? N/A F2Z5G5 33734450
    594703 6znl:F (3.8) BS01 ADP ? N/A F2Z5G5 33734450
    594704 6znl:G (3.8) BS01 ADP ? N/A F2Z5G5 33734450
    594705 6znl:H (3.8) BS01 ATP 3.6.4.- GO:0000786 ... Q6QAQ1 33734450
    594706 6znl:I (3.8) BS01 ADP ? N/A F2Z5G5 33734450
    594707 6znl:J (3.8) BS01 ADP ? GO:0005737 ... I3LHK5 33734450
    594708 6znl:Y (3.8) BS01 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594709 6znl:Y (3.8) BS02 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594710 6znl:Y (3.8) BS03 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594711 6znm:G (4.1) BS01 ADP ? N/A F2Z5G5 33734450
    594712 6znm:H (4.1) BS01 ATP 3.6.4.- GO:0000786 ... Q6QAQ1 33734450
    594713 6znm:I (4.1) BS01 ADP ? N/A F2Z5G5 33734450
    594714 6znm:J (4.1) BS01 ADP ? GO:0005737 ... I3LHK5 33734450
    594715 6znm:Y (4.1) BS01 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594716 6znm:Y (4.1) BS02 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594717 6znm:Y (4.1) BS03 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594718 6znn:G (4.5) BS01 ADP ? N/A F2Z5G5 33734450
    594719 6znn:H (4.5) BS01 ATP 3.6.4.- GO:0000786 ... Q6QAQ1 33734450
    594720 6znn:I (4.5) BS01 ADP ? N/A F2Z5G5 33734450
    594721 6znn:J (4.5) BS01 ADP ? GO:0005737 ... I3LHK5 33734450
    594722 6znn:Y (4.5) BS01 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594723 6znn:Y (4.5) BS02 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594724 6znn:Y (4.5) BS03 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594725 6zno:G (6.8) BS01 ADP ? N/A F2Z5G5 33734450
    594726 6zno:H (6.8) BS01 ATP 3.6.4.- GO:0000786 ... Q6QAQ1 33734450
    594727 6zno:I (6.8) BS01 ADP ? N/A F2Z5G5 33734450
    594728 6zno:J (6.8) BS01 ADP ? GO:0005737 ... I3LHK5 33734450
    594729 6zno:Y (6.8) BS01 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594730 6zno:Y (6.8) BS02 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594731 6zno:Y (6.8) BS03 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594732 6znp:A (3.16) BS01 dna 3.6.4.- GO:0003676 ... P50830 33300032
    594733 6znp:A (3.16) BS02 ZN 3.6.4.- GO:0003676 ... P50830 33300032
    594734 6znp:B (3.16) BS01 dna 3.6.4.- GO:0003676 ... P50830 33300032
    594735 6znp:B (3.16) BS02 ZN 3.6.4.- GO:0003676 ... P50830 33300032
    594736 6znq:A (3.34) BS01 dna 3.6.4.- GO:0003676 ... P50830 33300032
    594737 6znq:A (3.34) BS02 ZN 3.6.4.- GO:0003676 ... P50830 33300032
    594738 6znq:A (3.34) BS03 ANP 3.6.4.- GO:0003676 ... P50830 33300032
    594739 6znq:B (3.34) BS01 dna 3.6.4.- GO:0003676 ... P50830 33300032
    594740 6znq:B (3.34) BS02 ZN 3.6.4.- GO:0003676 ... P50830 33300032
    594741 6znq:B (3.34) BS03 ANP 3.6.4.- GO:0003676 ... P50830 33300032
    594742 6zns:A (3.32) BS01 ZN 3.6.4.- GO:0003676 ... P50830 33300032
    594743 6znt:A (1.96) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594744 6znt:A (1.96) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594745 6znt:B (1.96) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594746 6znt:B (1.96) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594747 6znt:C (1.96) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594748 6znt:C (1.96) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594749 6znt:D (1.96) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594750 6znt:D (1.96) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594751 6znt:E (1.96) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594752 6znt:E (1.96) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594753 6znt:F (1.96) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594754 6znt:F (1.96) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594755 6znu:A (2.33) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594756 6znu:A (2.33) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594757 6znu:B (2.33) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594758 6znu:B (2.33) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594759 6znu:C (2.33) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594760 6znu:D (2.33) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594761 6znu:D (2.33) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594762 6znu:E (2.33) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594763 6znu:E (2.33) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594764 6znu:G (2.33) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594765 6znu:G (2.33) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    594766 6znv:A (1.14) BS01 QMW ? GO:0006338 ... Q86U86 33216538
    594767 6znv:A (1.14) BS02 ZN ? GO:0006338 ... Q86U86 33216538
    594768 6znw:A (2.121) BS01 FLC 2.3.3.8 GO:0000166 ... A0A7K4AG75 34294920
    594769 6znw:B (2.121) BS01 Q5B 2.3.3.8 GO:0003824 ... A0A7K4AGC1 34294920
    594770 6znx:A (2.4) BS01 ADP 2.7.1.15 GO:0004747 ... A0A0B0SD75 N/A
    594771 6znx:B (2.4) BS01 ADP 2.7.1.15 GO:0004747 ... A0A0B0SD75 N/A
    594772 6znx:C (2.4) BS01 ADP 2.7.1.15 GO:0004747 ... A0A0B0SD75 N/A
    594773 6znx:D (2.4) BS01 ADP 2.7.1.15 GO:0004747 ... A0A0B0SD75 N/A
    594774 6zo4:G (8.2) BS01 ADP ? N/A F2Z5G5 33734450
    594775 6zo4:H (8.2) BS01 ATP 3.6.4.- GO:0000786 ... Q6QAQ1 33734450
    594776 6zo4:I (8.2) BS01 ADP ? N/A F2Z5G5 33734450
    594777 6zo4:J (8.2) BS01 ADP ? GO:0005737 ... I3LHK5 33734450
    594778 6zo4:Y (8.2) BS01 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594779 6zo4:Y (8.2) BS02 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594780 6zo4:Y (8.2) BS03 ZN ? GO:0001725 ... A0A4X1TB62 33734450
    594781 6zo5:B (2.5) BS01 FUA ? GO:0005515 ... P31224 34188038
    594782 6zo5:C (2.5) BS01 LPX ? GO:0005515 ... P31224 34188038
    594783 6zo5:C (2.5) BS02 LPX ? GO:0005515 ... P31224 34188038
    594784 6zo6:B (2.35) BS01 MIY ? GO:0005515 ... P31224 34188038
    594785 6zo6:C (2.35) BS01 LPX ? GO:0005515 ... P31224 34188038
    594786 6zo7:A (2.85) BS01 3YI ? GO:0005515 ... P31224 34188038
    594787 6zo7:B (2.85) BS01 3YI ? GO:0005515 ... P31224 34188038
    594788 6zo8:B (2.5) BS01 MIY ? GO:0005515 ... P31224 34188038
    594789 6zo8:C (2.5) BS01 LPX ? GO:0005515 ... P31224 34188038
    594790 6zo8:C (2.5) BS02 LPX ? GO:0005515 ... P31224 34188038
    594791 6zo9:B (2.7) BS01 RBT ? GO:0005515 ... P31224 34188038
    594792 6zo9:B (2.7) BS02 RBT ? GO:0005515 ... P31224 34188038
    594793 6zob:A (2.8) BS01 3YI ? GO:0005515 ... P31224 34188038
    594794 6zoc:A (2.89) BS01 ERY ? GO:0005515 ... P31224 34188038
    594795 6zoc:B (2.89) BS01 3YI ? GO:0005515 ... P31224 34188038
    594796 6zod:A (2.85) BS01 FUA ? GO:0005515 ... P31224 34188038
    594797 6zod:B (2.85) BS01 8K6 ? GO:0005515 ... P31224 34188038
    594798 6zod:B (2.85) BS02 FUA ? GO:0005515 ... P31224 34188038
    594799 6zod:B (2.85) BS03 FUA ? GO:0005515 ... P31224 34188038
    594800 6zod:B (2.85) BS04 FUA ? GO:0005515 ... P31224 34188038

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).