SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    596001 6zsa:4 (4.0) BS01 rna ? GO:0003735 ... Q9P0J6 32812867
    596002 6zsa:4 (4.0) BS02 ZN ? GO:0003735 ... Q9P0J6 32812867
    596003 6zsa:5 (4.0) BS01 rna ? GO:0003723 ... Q9BZE1 32812867
    596004 6zsa:6 (4.0) BS01 rna ? GO:0005515 ... Q96DV4 32812867
    596005 6zsa:6 (4.0) BS02 rna ? GO:0005515 ... Q96DV4 32812867
    596006 6zsa:8 (4.0) BS01 rna ? GO:0003723 ... Q9NQ50 32812867
    596007 6zsa:8 (4.0) BS02 rna ? GO:0003723 ... Q9NQ50 32812867
    596008 6zsa:9 (4.0) BS01 rna ? GO:0003723 ... Q8IXM3 32812867
    596009 6zsa:A0 (4.0) BS01 rna ? GO:0003735 ... P82930 32812867
    596010 6zsa:A2 (4.0) BS01 rna ? GO:0001650 ... Q96BP2 32812867
    596011 6zsa:A3 (4.0) BS01 rna ? GO:0005515 ... Q9NWT8 32812867
    596012 6zsa:AB (4.0) BS01 rna ? GO:0003735 ... Q9Y399 32812867
    596013 6zsa:AB (4.0) BS02 ZN ? GO:0003735 ... Q9Y399 32812867
    596014 6zsa:AC (4.0) BS01 rna ? GO:0003723 ... Q96EL2 32812867
    596015 6zsa:AD (4.0) BS01 rna ? GO:0003723 ... P82675 32812867
    596016 6zsa:AD (4.0) BS02 rna ? GO:0003723 ... P82675 32812867
    596017 6zsa:AE (4.0) BS01 rna ? GO:0003735 ... P82932 32812867
    596018 6zsa:AF (4.0) BS01 rna ? GO:0000028 ... Q9Y2R9 32812867
    596019 6zsa:AG (4.0) BS01 rna ? GO:0003723 ... P82933 32812867
    596020 6zsa:AH (4.0) BS01 rna ? GO:0005739 ... P82664 32812867
    596021 6zsa:AI (4.0) BS01 rna ? GO:0003723 ... P82912 32812867
    596022 6zsa:AJ (4.0) BS01 rna ? GO:0003723 ... O15235 32812867
    596023 6zsa:AK (4.0) BS01 rna ? GO:0003723 ... O60783 32812867
    596024 6zsa:AL (4.0) BS01 rna ? GO:0003723 ... P82914 32812867
    596025 6zsa:AM (4.0) BS01 rna ? GO:0003735 ... Q9Y3D3 32812867
    596026 6zsa:AN (4.0) BS01 rna ? GO:0003735 ... Q9Y2R5 32812867
    596027 6zsa:AO (4.0) BS01 rna ? GO:0003735 ... Q9Y676 32812867
    596028 6zsa:AO (4.0) BS02 ZN ? GO:0003735 ... Q9Y676 32812867
    596029 6zsa:AP (4.0) BS01 rna ? GO:0003735 ... Q9Y3D5 32812867
    596030 6zsa:AP (4.0) BS02 ZN ? GO:0003735 ... Q9Y3D5 32812867
    596031 6zsa:AQ (4.0) BS01 rna ? GO:0003723 ... P82921 32812867
    596032 6zsa:AS (4.0) BS01 rna ? GO:0003723 ... Q9Y3D9 32812867
    596033 6zsa:AT (4.0) BS01 rna ? GO:0003735 ... P82663 32812867
    596034 6zsa:AT (4.0) BS02 ZN ? GO:0003735 ... P82663 32812867
    596035 6zsa:AU (4.0) BS01 rna ? GO:0003723 ... Q9BYN8 32812867
    596036 6zsa:AV (4.0) BS01 rna ? GO:0000049 ... Q92552 32812867
    596037 6zsa:AX (4.0) BS01 rna ? GO:0003723 ... P51398 32812867
    596038 6zsa:AX (4.0) BS02 GTP ? GO:0003723 ... P51398 32812867
    596039 6zsa:AZ (4.0) BS01 rna ? GO:0003735 ... Q9Y291 32812867
    596040 6zsa:XD (4.0) BS01 rna ? GO:0003723 ... Q5T653 32812867
    596041 6zsa:XE (4.0) BS01 rna ? GO:0003723 ... P09001 32812867
    596042 6zsa:XF (4.0) BS01 rna ? GO:0003723 ... Q9BYD3 32812867
    596043 6zsa:XH (4.0) BS01 rna ? GO:0003723 ... Q9BYD2 32812867
    596044 6zsa:XI (4.0) BS01 rna ? GO:0003723 ... Q7Z7H8 32812867
    596045 6zsa:XI (4.0) BS02 peptide ? GO:0003723 ... Q7Z7H8 32812867
    596046 6zsa:XI (4.0) BS03 peptide ? GO:0003723 ... Q7Z7H8 32812867
    596047 6zsa:XI (4.0) BS04 peptide ? GO:0003723 ... Q7Z7H8 32812867
    596048 6zsa:XJ (4.0) BS01 rna ? GO:0003723 ... Q9Y3B7 32812867
    596049 6zsa:XK (4.0) BS01 rna ? GO:0003723 ... Q9BYD1 32812867
    596050 6zsa:XL (4.0) BS01 rna ? GO:0003723 ... Q6P1L8 32812867
    596051 6zsa:XM (4.0) BS01 rna ? GO:0003723 ... Q9P015 32812867
    596052 6zsa:XM (4.0) BS02 MG ? GO:0003723 ... Q9P015 32812867
    596053 6zsa:XN (4.0) BS01 rna ? GO:0003735 ... Q9NX20 32812867
    596054 6zsa:XN (4.0) BS02 rna ? GO:0003735 ... Q9NX20 32812867
    596055 6zsa:XO (4.0) BS01 rna ? GO:0003735 ... Q9NRX2 32812867
    596056 6zsa:XP (4.0) BS01 rna ? GO:0003723 ... Q9H0U6 32812867
    596057 6zsa:XP (4.0) BS02 rna ? GO:0003723 ... Q9H0U6 32812867
    596058 6zsa:XQ (4.0) BS01 rna ? GO:0003735 ... P49406 32812867
    596059 6zsa:XR (4.0) BS01 rna ? GO:0003723 ... Q9BYC9 32812867
    596060 6zsa:XS (4.0) BS01 rna ? GO:0003723 ... Q7Z2W9 32812867
    596061 6zsa:XT (4.0) BS01 rna ? GO:0003723 ... Q9NWU5 32812867
    596062 6zsa:XU (4.0) BS01 rna ? GO:0001650 ... Q16540 32812867
    596063 6zsa:XV (4.0) BS01 rna ? GO:0003723 ... Q96A35 32812867
    596064 6zsa:XW (4.0) BS01 rna ? GO:0003723 ... Q9P0M9 32812867
    596065 6zsa:XX (4.0) BS01 rna ? GO:0003723 ... Q13084 32812867
    596066 6zsa:XY (4.0) BS01 rna ? GO:0003735 ... Q9HD33 32812867
    596067 6zsa:XZ (4.0) BS01 rna ? GO:0003735 ... Q8TCC3 32812867
    596068 6zsa:a (4.0) BS01 rna ? GO:0003723 ... Q9Y6G3 32812867
    596069 6zsa:b (4.0) BS01 rna ? GO:0003723 ... Q8N983 32812867
    596070 6zsa:c (4.0) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 32812867
    596071 6zsa:d (4.0) BS01 rna ? GO:0003723 ... Q9BRJ2 32812867
    596072 6zsa:f (4.0) BS01 rna ? GO:0005515 ... Q96GC5 32812867
    596073 6zsa:f (4.0) BS02 rna ? GO:0005515 ... Q96GC5 32812867
    596074 6zsa:g (4.0) BS01 rna ? GO:0003735 ... Q13405 32812867
    596075 6zsa:i (4.0) BS01 rna ? GO:0003735 ... Q4U2R6 32812867
    596076 6zsa:j (4.0) BS01 rna ? GO:0003735 ... Q86TS9 32812867
    596077 6zsa:l (4.0) BS01 rna ? GO:0003723 ... Q6P161 32812867
    596078 6zsa:m (4.0) BS01 rna ? GO:0003735 ... Q7Z7F7 32812867
    596079 6zsa:o (4.0) BS01 rna ? GO:0003735 ... Q9BQC6 32812867
    596080 6zsa:q (4.0) BS01 rna ? GO:0005515 ... Q8TAE8 32812867
    596081 6zsa:r (4.0) BS01 rna ? GO:0003735 ... Q9NVS2 32812867
    596082 6zsa:s (4.0) BS01 rna ? GO:0003723 ... Q9NP92 32812867
    596083 6zsa:t1 (4.0) BS01 peptide ? GO:0003723 ... P52815 32812867
    596084 6zsa:t3 (4.0) BS01 peptide ? GO:0003723 ... P52815 32812867
    596085 6zsa:t3 (4.0) BS02 peptide ? GO:0003723 ... P52815 32812867
    596086 6zsb:0 (4.5) BS01 rna ? GO:0003723 ... Q9BYC8 32812867
    596087 6zsb:0 (4.5) BS02 ZN ? GO:0003723 ... Q9BYC8 32812867
    596088 6zsb:1 (4.5) BS01 rna ? GO:0003735 ... O75394 32812867
    596089 6zsb:2 (4.5) BS01 rna ? GO:0003735 ... Q9BQ48 32812867
    596090 6zsb:3 (4.5) BS01 rna ? GO:0003735 ... Q9NZE8 32812867
    596091 6zsb:4 (4.5) BS01 rna ? GO:0003735 ... Q9P0J6 32812867
    596092 6zsb:4 (4.5) BS02 ZN ? GO:0003735 ... Q9P0J6 32812867
    596093 6zsb:5 (4.5) BS01 rna ? GO:0003723 ... Q9BZE1 32812867
    596094 6zsb:6 (4.5) BS01 rna ? GO:0005515 ... Q96DV4 32812867
    596095 6zsb:6 (4.5) BS02 rna ? GO:0005515 ... Q96DV4 32812867
    596096 6zsb:8 (4.5) BS01 rna ? GO:0003723 ... Q9NQ50 32812867
    596097 6zsb:8 (4.5) BS02 rna ? GO:0003723 ... Q9NQ50 32812867
    596098 6zsb:9 (4.5) BS01 rna ? GO:0003723 ... Q8IXM3 32812867
    596099 6zsb:A0 (4.5) BS01 rna ? GO:0003735 ... P82930 32812867
    596100 6zsb:A2 (4.5) BS01 rna ? GO:0001650 ... Q96BP2 32812867
    596101 6zsb:A3 (4.5) BS01 rna ? GO:0005515 ... Q9NWT8 32812867
    596102 6zsb:AB (4.5) BS01 rna ? GO:0003735 ... Q9Y399 32812867
    596103 6zsb:AB (4.5) BS02 ZN ? GO:0003735 ... Q9Y399 32812867
    596104 6zsb:AC (4.5) BS01 rna ? GO:0003723 ... Q96EL2 32812867
    596105 6zsb:AD (4.5) BS01 rna ? GO:0003723 ... P82675 32812867
    596106 6zsb:AE (4.5) BS01 rna ? GO:0003735 ... P82932 32812867
    596107 6zsb:AF (4.5) BS01 rna ? GO:0000028 ... Q9Y2R9 32812867
    596108 6zsb:AG (4.5) BS01 rna ? GO:0003723 ... P82933 32812867
    596109 6zsb:AH (4.5) BS01 rna ? GO:0005739 ... P82664 32812867
    596110 6zsb:AI (4.5) BS01 rna ? GO:0003723 ... P82912 32812867
    596111 6zsb:AJ (4.5) BS01 rna ? GO:0003723 ... O15235 32812867
    596112 6zsb:AK (4.5) BS01 rna ? GO:0003723 ... O60783 32812867
    596113 6zsb:AL (4.5) BS01 rna ? GO:0003723 ... P82914 32812867
    596114 6zsb:AM (4.5) BS01 rna ? GO:0003735 ... Q9Y3D3 32812867
    596115 6zsb:AN (4.5) BS01 rna ? GO:0003735 ... Q9Y2R5 32812867
    596116 6zsb:AO (4.5) BS01 rna ? GO:0003735 ... Q9Y676 32812867
    596117 6zsb:AP (4.5) BS01 rna ? GO:0003735 ... Q9Y3D5 32812867
    596118 6zsb:AP (4.5) BS02 ZN ? GO:0003735 ... Q9Y3D5 32812867
    596119 6zsb:AQ (4.5) BS01 rna ? GO:0003723 ... P82921 32812867
    596120 6zsb:AS (4.5) BS01 rna ? GO:0003723 ... Q9Y3D9 32812867
    596121 6zsb:AT (4.5) BS01 rna ? GO:0003735 ... P82663 32812867
    596122 6zsb:AT (4.5) BS02 ZN ? GO:0003735 ... P82663 32812867
    596123 6zsb:AU (4.5) BS01 rna ? GO:0003723 ... Q9BYN8 32812867
    596124 6zsb:AV (4.5) BS01 rna ? GO:0000049 ... Q92552 32812867
    596125 6zsb:AX (4.5) BS01 rna ? GO:0003723 ... P51398 32812867
    596126 6zsb:AX (4.5) BS02 GTP ? GO:0003723 ... P51398 32812867
    596127 6zsb:AZ (4.5) BS01 rna ? GO:0003735 ... Q9Y291 32812867
    596128 6zsb:XD (4.5) BS01 rna ? GO:0003723 ... Q5T653 32812867
    596129 6zsb:XE (4.5) BS01 rna ? GO:0003723 ... P09001 32812867
    596130 6zsb:XF (4.5) BS01 rna ? GO:0003723 ... Q9BYD3 32812867
    596131 6zsb:XH (4.5) BS01 rna ? GO:0003723 ... Q9BYD2 32812867
    596132 6zsb:XI (4.5) BS01 rna ? GO:0003723 ... Q7Z7H8 32812867
    596133 6zsb:XI (4.5) BS02 peptide ? GO:0003723 ... Q7Z7H8 32812867
    596134 6zsb:XI (4.5) BS03 peptide ? GO:0003723 ... Q7Z7H8 32812867
    596135 6zsb:XI (4.5) BS04 peptide ? GO:0003723 ... Q7Z7H8 32812867
    596136 6zsb:XJ (4.5) BS01 rna ? GO:0003723 ... Q9Y3B7 32812867
    596137 6zsb:XK (4.5) BS01 rna ? GO:0003723 ... Q9BYD1 32812867
    596138 6zsb:XL (4.5) BS01 rna ? GO:0003723 ... Q6P1L8 32812867
    596139 6zsb:XM (4.5) BS01 rna ? GO:0003723 ... Q9P015 32812867
    596140 6zsb:XM (4.5) BS02 MG ? GO:0003723 ... Q9P015 32812867
    596141 6zsb:XN (4.5) BS01 rna ? GO:0003735 ... Q9NX20 32812867
    596142 6zsb:XO (4.5) BS01 rna ? GO:0003735 ... Q9NRX2 32812867
    596143 6zsb:XP (4.5) BS01 rna ? GO:0003723 ... Q9H0U6 32812867
    596144 6zsb:XP (4.5) BS02 rna ? GO:0003723 ... Q9H0U6 32812867
    596145 6zsb:XQ (4.5) BS01 rna ? GO:0003735 ... P49406 32812867
    596146 6zsb:XR (4.5) BS01 rna ? GO:0003723 ... Q9BYC9 32812867
    596147 6zsb:XS (4.5) BS01 rna ? GO:0003723 ... Q7Z2W9 32812867
    596148 6zsb:XT (4.5) BS01 rna ? GO:0003723 ... Q9NWU5 32812867
    596149 6zsb:XU (4.5) BS01 rna ? GO:0001650 ... Q16540 32812867
    596150 6zsb:XV (4.5) BS01 rna ? GO:0003723 ... Q96A35 32812867
    596151 6zsb:XW (4.5) BS01 rna ? GO:0003723 ... Q9P0M9 32812867
    596152 6zsb:XX (4.5) BS01 rna ? GO:0003723 ... Q13084 32812867
    596153 6zsb:XY (4.5) BS01 rna ? GO:0003735 ... Q9HD33 32812867
    596154 6zsb:XZ (4.5) BS01 rna ? GO:0003735 ... Q8TCC3 32812867
    596155 6zsb:a (4.5) BS01 rna ? GO:0003723 ... Q9Y6G3 32812867
    596156 6zsb:b (4.5) BS01 rna ? GO:0003723 ... Q8N983 32812867
    596157 6zsb:c (4.5) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 32812867
    596158 6zsb:d (4.5) BS01 rna ? GO:0003723 ... Q9BRJ2 32812867
    596159 6zsb:f (4.5) BS01 rna ? GO:0005515 ... Q96GC5 32812867
    596160 6zsb:f (4.5) BS02 rna ? GO:0005515 ... Q96GC5 32812867
    596161 6zsb:g (4.5) BS01 rna ? GO:0003735 ... Q13405 32812867
    596162 6zsb:i (4.5) BS01 rna ? GO:0003735 ... Q4U2R6 32812867
    596163 6zsb:j (4.5) BS01 rna ? GO:0003735 ... Q86TS9 32812867
    596164 6zsb:l (4.5) BS01 rna ? GO:0003723 ... Q6P161 32812867
    596165 6zsb:m (4.5) BS01 rna ? GO:0003735 ... Q7Z7F7 32812867
    596166 6zsb:o (4.5) BS01 rna ? GO:0003735 ... Q9BQC6 32812867
    596167 6zsb:q (4.5) BS01 rna ? GO:0005515 ... Q8TAE8 32812867
    596168 6zsb:r (4.5) BS01 rna ? GO:0003735 ... Q9NVS2 32812867
    596169 6zsb:s (4.5) BS01 rna ? GO:0003723 ... Q9NP92 32812867
    596170 6zsb:t1 (4.5) BS01 peptide ? GO:0003723 ... P52815 32812867
    596171 6zsb:t3 (4.5) BS01 peptide ? GO:0003723 ... P52815 32812867
    596172 6zsb:t3 (4.5) BS02 peptide ? GO:0003723 ... P52815 32812867
    596173 6zsc:0 (3.5) BS01 rna ? GO:0003723 ... Q9BYC8 32812867
    596174 6zsc:0 (3.5) BS02 ZN ? GO:0003723 ... Q9BYC8 32812867
    596175 6zsc:1 (3.5) BS01 rna ? GO:0003735 ... O75394 32812867
    596176 6zsc:2 (3.5) BS01 rna ? GO:0003735 ... Q9BQ48 32812867
    596177 6zsc:3 (3.5) BS01 rna ? GO:0003735 ... Q9NZE8 32812867
    596178 6zsc:4 (3.5) BS01 rna ? GO:0003735 ... Q9P0J6 32812867
    596179 6zsc:4 (3.5) BS02 ZN ? GO:0003735 ... Q9P0J6 32812867
    596180 6zsc:5 (3.5) BS01 rna ? GO:0003723 ... Q9BZE1 32812867
    596181 6zsc:6 (3.5) BS01 rna ? GO:0005515 ... Q96DV4 32812867
    596182 6zsc:6 (3.5) BS02 rna ? GO:0005515 ... Q96DV4 32812867
    596183 6zsc:8 (3.5) BS01 rna ? GO:0003723 ... Q9NQ50 32812867
    596184 6zsc:9 (3.5) BS01 rna ? GO:0003723 ... Q8IXM3 32812867
    596185 6zsc:A0 (3.5) BS01 rna ? GO:0003735 ... P82930 32812867
    596186 6zsc:A2 (3.5) BS01 rna ? GO:0001650 ... Q96BP2 32812867
    596187 6zsc:A3 (3.5) BS01 rna ? GO:0005515 ... Q9NWT8 32812867
    596188 6zsc:AB (3.5) BS01 rna ? GO:0003735 ... Q9Y399 32812867
    596189 6zsc:AB (3.5) BS02 ZN ? GO:0003735 ... Q9Y399 32812867
    596190 6zsc:AC (3.5) BS01 rna ? GO:0003723 ... Q96EL2 32812867
    596191 6zsc:AD (3.5) BS01 rna ? GO:0003723 ... P82675 32812867
    596192 6zsc:AE (3.5) BS01 rna ? GO:0003735 ... P82932 32812867
    596193 6zsc:AF (3.5) BS01 rna ? GO:0000028 ... Q9Y2R9 32812867
    596194 6zsc:AF (3.5) BS02 rna ? GO:0000028 ... Q9Y2R9 32812867
    596195 6zsc:AG (3.5) BS01 rna ? GO:0003723 ... P82933 32812867
    596196 6zsc:AH (3.5) BS01 rna ? GO:0005739 ... P82664 32812867
    596197 6zsc:AI (3.5) BS01 rna ? GO:0003723 ... P82912 32812867
    596198 6zsc:AJ (3.5) BS01 rna ? GO:0003723 ... O15235 32812867
    596199 6zsc:AK (3.5) BS01 rna ? GO:0003723 ... O60783 32812867
    596200 6zsc:AL (3.5) BS01 rna ? GO:0003723 ... P82914 32812867

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).