SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    596201 6zsc:AM (3.5) BS01 rna ? GO:0003735 ... Q9Y3D3 32812867
    596202 6zsc:AN (3.5) BS01 rna ? GO:0003735 ... Q9Y2R5 32812867
    596203 6zsc:AO (3.5) BS01 rna ? GO:0003735 ... Q9Y676 32812867
    596204 6zsc:AO (3.5) BS02 ZN ? GO:0003735 ... Q9Y676 32812867
    596205 6zsc:AP (3.5) BS01 rna ? GO:0003735 ... Q9Y3D5 32812867
    596206 6zsc:AP (3.5) BS02 ZN ? GO:0003735 ... Q9Y3D5 32812867
    596207 6zsc:AQ (3.5) BS01 rna ? GO:0003723 ... P82921 32812867
    596208 6zsc:AS (3.5) BS01 rna ? GO:0003723 ... Q9Y3D9 32812867
    596209 6zsc:AT (3.5) BS01 rna ? GO:0003735 ... P82663 32812867
    596210 6zsc:AT (3.5) BS02 ZN ? GO:0003735 ... P82663 32812867
    596211 6zsc:AU (3.5) BS01 rna ? GO:0003723 ... Q9BYN8 32812867
    596212 6zsc:AV (3.5) BS01 rna ? GO:0000049 ... Q92552 32812867
    596213 6zsc:AX (3.5) BS01 rna ? GO:0003723 ... P51398 32812867
    596214 6zsc:AX (3.5) BS02 GTP ? GO:0003723 ... P51398 32812867
    596215 6zsc:AZ (3.5) BS01 rna ? GO:0003735 ... Q9Y291 32812867
    596216 6zsc:XD (3.5) BS01 rna ? GO:0003723 ... Q5T653 32812867
    596217 6zsc:XE (3.5) BS01 rna ? GO:0003723 ... P09001 32812867
    596218 6zsc:XF (3.5) BS01 rna ? GO:0003723 ... Q9BYD3 32812867
    596219 6zsc:XH (3.5) BS01 rna ? GO:0003723 ... Q9BYD2 32812867
    596220 6zsc:XI (3.5) BS01 rna ? GO:0003723 ... Q7Z7H8 32812867
    596221 6zsc:XI (3.5) BS02 peptide ? GO:0003723 ... Q7Z7H8 32812867
    596222 6zsc:XI (3.5) BS03 peptide ? GO:0003723 ... Q7Z7H8 32812867
    596223 6zsc:XI (3.5) BS04 peptide ? GO:0003723 ... Q7Z7H8 32812867
    596224 6zsc:XJ (3.5) BS01 rna ? GO:0003723 ... Q9Y3B7 32812867
    596225 6zsc:XK (3.5) BS01 rna ? GO:0003723 ... Q9BYD1 32812867
    596226 6zsc:XL (3.5) BS01 rna ? GO:0003723 ... Q6P1L8 32812867
    596227 6zsc:XM (3.5) BS01 rna ? GO:0003723 ... Q9P015 32812867
    596228 6zsc:XM (3.5) BS02 MG ? GO:0003723 ... Q9P015 32812867
    596229 6zsc:XN (3.5) BS01 rna ? GO:0003735 ... Q9NX20 32812867
    596230 6zsc:XO (3.5) BS01 rna ? GO:0003735 ... Q9NRX2 32812867
    596231 6zsc:XP (3.5) BS01 rna ? GO:0003723 ... Q9H0U6 32812867
    596232 6zsc:XP (3.5) BS02 rna ? GO:0003723 ... Q9H0U6 32812867
    596233 6zsc:XQ (3.5) BS01 rna ? GO:0003735 ... P49406 32812867
    596234 6zsc:XR (3.5) BS01 rna ? GO:0003723 ... Q9BYC9 32812867
    596235 6zsc:XS (3.5) BS01 rna ? GO:0003723 ... Q7Z2W9 32812867
    596236 6zsc:XT (3.5) BS01 rna ? GO:0003723 ... Q9NWU5 32812867
    596237 6zsc:XU (3.5) BS01 rna ? GO:0001650 ... Q16540 32812867
    596238 6zsc:XV (3.5) BS01 rna ? GO:0003723 ... Q96A35 32812867
    596239 6zsc:XW (3.5) BS01 rna ? GO:0003723 ... Q9P0M9 32812867
    596240 6zsc:XX (3.5) BS01 rna ? GO:0003723 ... Q13084 32812867
    596241 6zsc:XY (3.5) BS01 rna ? GO:0003735 ... Q9HD33 32812867
    596242 6zsc:XZ (3.5) BS01 rna ? GO:0003735 ... Q8TCC3 32812867
    596243 6zsc:a (3.5) BS01 rna ? GO:0003723 ... Q9Y6G3 32812867
    596244 6zsc:b (3.5) BS01 rna ? GO:0003723 ... Q8N983 32812867
    596245 6zsc:c (3.5) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 32812867
    596246 6zsc:d (3.5) BS01 rna ? GO:0003723 ... Q9BRJ2 32812867
    596247 6zsc:f (3.5) BS01 rna ? GO:0005515 ... Q96GC5 32812867
    596248 6zsc:f (3.5) BS02 rna ? GO:0005515 ... Q96GC5 32812867
    596249 6zsc:g (3.5) BS01 rna ? GO:0003735 ... Q13405 32812867
    596250 6zsc:i (3.5) BS01 rna ? GO:0003735 ... Q4U2R6 32812867
    596251 6zsc:j (3.5) BS01 rna ? GO:0003735 ... Q86TS9 32812867
    596252 6zsc:l (3.5) BS01 rna ? GO:0003723 ... Q6P161 32812867
    596253 6zsc:m (3.5) BS01 rna ? GO:0003735 ... Q7Z7F7 32812867
    596254 6zsc:o (3.5) BS01 rna ? GO:0003735 ... Q9BQC6 32812867
    596255 6zsc:q (3.5) BS01 rna ? GO:0005515 ... Q8TAE8 32812867
    596256 6zsc:q (3.5) BS02 rna ? GO:0005515 ... Q8TAE8 32812867
    596257 6zsc:r (3.5) BS01 rna ? GO:0003735 ... Q9NVS2 32812867
    596258 6zsc:s (3.5) BS01 rna ? GO:0003723 ... Q9NP92 32812867
    596259 6zsc:t1 (3.5) BS01 peptide ? GO:0003723 ... P52815 32812867
    596260 6zsc:t3 (3.5) BS01 peptide ? GO:0003723 ... P52815 32812867
    596261 6zsc:t3 (3.5) BS02 peptide ? GO:0003723 ... P52815 32812867
    596262 6zsd:0 (3.7) BS01 rna ? GO:0003723 ... Q9BYC8 32812867
    596263 6zsd:0 (3.7) BS02 ZN ? GO:0003723 ... Q9BYC8 32812867
    596264 6zsd:1 (3.7) BS01 rna ? GO:0003735 ... O75394 32812867
    596265 6zsd:1 (3.7) BS02 rna ? GO:0003735 ... O75394 32812867
    596266 6zsd:2 (3.7) BS01 rna ? GO:0003735 ... Q9BQ48 32812867
    596267 6zsd:3 (3.7) BS01 rna ? GO:0003735 ... Q9NZE8 32812867
    596268 6zsd:4 (3.7) BS01 rna ? GO:0003735 ... Q9P0J6 32812867
    596269 6zsd:4 (3.7) BS02 ZN ? GO:0003735 ... Q9P0J6 32812867
    596270 6zsd:5 (3.7) BS01 rna ? GO:0003723 ... Q9BZE1 32812867
    596271 6zsd:6 (3.7) BS01 rna ? GO:0005515 ... Q96DV4 32812867
    596272 6zsd:6 (3.7) BS02 rna ? GO:0005515 ... Q96DV4 32812867
    596273 6zsd:8 (3.7) BS01 rna ? GO:0003723 ... Q9NQ50 32812867
    596274 6zsd:8 (3.7) BS02 rna ? GO:0003723 ... Q9NQ50 32812867
    596275 6zsd:9 (3.7) BS01 rna ? GO:0003723 ... Q8IXM3 32812867
    596276 6zsd:A0 (3.7) BS01 rna ? GO:0003735 ... P82930 32812867
    596277 6zsd:A2 (3.7) BS01 rna ? GO:0001650 ... Q96BP2 32812867
    596278 6zsd:A3 (3.7) BS01 rna ? GO:0005515 ... Q9NWT8 32812867
    596279 6zsd:AB (3.7) BS01 rna ? GO:0003735 ... Q9Y399 32812867
    596280 6zsd:AB (3.7) BS02 ZN ? GO:0003735 ... Q9Y399 32812867
    596281 6zsd:AC (3.7) BS01 rna ? GO:0003723 ... Q96EL2 32812867
    596282 6zsd:AD (3.7) BS01 rna ? GO:0003723 ... P82675 32812867
    596283 6zsd:AD (3.7) BS02 rna ? GO:0003723 ... P82675 32812867
    596284 6zsd:AE (3.7) BS01 rna ? GO:0003735 ... P82932 32812867
    596285 6zsd:AF (3.7) BS01 rna ? GO:0000028 ... Q9Y2R9 32812867
    596286 6zsd:AF (3.7) BS02 rna ? GO:0000028 ... Q9Y2R9 32812867
    596287 6zsd:AG (3.7) BS01 rna ? GO:0003723 ... P82933 32812867
    596288 6zsd:AH (3.7) BS01 rna ? GO:0005739 ... P82664 32812867
    596289 6zsd:AI (3.7) BS01 rna ? GO:0003723 ... P82912 32812867
    596290 6zsd:AJ (3.7) BS01 rna ? GO:0003723 ... O15235 32812867
    596291 6zsd:AK (3.7) BS01 rna ? GO:0003723 ... O60783 32812867
    596292 6zsd:AL (3.7) BS01 rna ? GO:0003723 ... P82914 32812867
    596293 6zsd:AM (3.7) BS01 rna ? GO:0003735 ... Q9Y3D3 32812867
    596294 6zsd:AN (3.7) BS01 rna ? GO:0003735 ... Q9Y2R5 32812867
    596295 6zsd:AO (3.7) BS01 rna ? GO:0003735 ... Q9Y676 32812867
    596296 6zsd:AO (3.7) BS02 ZN ? GO:0003735 ... Q9Y676 32812867
    596297 6zsd:AP (3.7) BS01 rna ? GO:0003735 ... Q9Y3D5 32812867
    596298 6zsd:AP (3.7) BS02 ZN ? GO:0003735 ... Q9Y3D5 32812867
    596299 6zsd:AQ (3.7) BS01 rna ? GO:0003723 ... P82921 32812867
    596300 6zsd:AS (3.7) BS01 rna ? GO:0003723 ... Q9Y3D9 32812867
    596301 6zsd:AT (3.7) BS01 rna ? GO:0003735 ... P82663 32812867
    596302 6zsd:AU (3.7) BS01 rna ? GO:0003723 ... Q9BYN8 32812867
    596303 6zsd:AV (3.7) BS01 rna ? GO:0000049 ... Q92552 32812867
    596304 6zsd:AX (3.7) BS01 rna ? GO:0003723 ... P51398 32812867
    596305 6zsd:AX (3.7) BS02 GTP ? GO:0003723 ... P51398 32812867
    596306 6zsd:AZ (3.7) BS01 rna ? GO:0003735 ... Q9Y291 32812867
    596307 6zsd:XD (3.7) BS01 rna ? GO:0003723 ... Q5T653 32812867
    596308 6zsd:XE (3.7) BS01 rna ? GO:0003723 ... P09001 32812867
    596309 6zsd:XF (3.7) BS01 rna ? GO:0003723 ... Q9BYD3 32812867
    596310 6zsd:XH (3.7) BS01 rna ? GO:0003723 ... Q9BYD2 32812867
    596311 6zsd:XI (3.7) BS01 rna ? GO:0003723 ... Q7Z7H8 32812867
    596312 6zsd:XI (3.7) BS02 peptide ? GO:0003723 ... Q7Z7H8 32812867
    596313 6zsd:XI (3.7) BS03 peptide ? GO:0003723 ... Q7Z7H8 32812867
    596314 6zsd:XI (3.7) BS04 peptide ? GO:0003723 ... Q7Z7H8 32812867
    596315 6zsd:XJ (3.7) BS01 rna ? GO:0003723 ... Q9Y3B7 32812867
    596316 6zsd:XK (3.7) BS01 rna ? GO:0003723 ... Q9BYD1 32812867
    596317 6zsd:XL (3.7) BS01 rna ? GO:0003723 ... Q6P1L8 32812867
    596318 6zsd:XM (3.7) BS01 rna ? GO:0003723 ... Q9P015 32812867
    596319 6zsd:XM (3.7) BS02 MG ? GO:0003723 ... Q9P015 32812867
    596320 6zsd:XN (3.7) BS01 rna ? GO:0003735 ... Q9NX20 32812867
    596321 6zsd:XO (3.7) BS01 rna ? GO:0003735 ... Q9NRX2 32812867
    596322 6zsd:XP (3.7) BS01 rna ? GO:0003723 ... Q9H0U6 32812867
    596323 6zsd:XP (3.7) BS02 rna ? GO:0003723 ... Q9H0U6 32812867
    596324 6zsd:XQ (3.7) BS01 rna ? GO:0003735 ... P49406 32812867
    596325 6zsd:XR (3.7) BS01 rna ? GO:0003723 ... Q9BYC9 32812867
    596326 6zsd:XS (3.7) BS01 rna ? GO:0003723 ... Q7Z2W9 32812867
    596327 6zsd:XT (3.7) BS01 rna ? GO:0003723 ... Q9NWU5 32812867
    596328 6zsd:XU (3.7) BS01 rna ? GO:0001650 ... Q16540 32812867
    596329 6zsd:XV (3.7) BS01 rna ? GO:0003723 ... Q96A35 32812867
    596330 6zsd:XW (3.7) BS01 rna ? GO:0003723 ... Q9P0M9 32812867
    596331 6zsd:XX (3.7) BS01 rna ? GO:0003723 ... Q13084 32812867
    596332 6zsd:XY (3.7) BS01 rna ? GO:0003735 ... Q9HD33 32812867
    596333 6zsd:XZ (3.7) BS01 rna ? GO:0003735 ... Q8TCC3 32812867
    596334 6zsd:a (3.7) BS01 rna ? GO:0003723 ... Q9Y6G3 32812867
    596335 6zsd:b (3.7) BS01 rna ? GO:0003723 ... Q8N983 32812867
    596336 6zsd:c (3.7) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 32812867
    596337 6zsd:d (3.7) BS01 rna ? GO:0003723 ... Q9BRJ2 32812867
    596338 6zsd:f (3.7) BS01 rna ? GO:0005515 ... Q96GC5 32812867
    596339 6zsd:f (3.7) BS02 rna ? GO:0005515 ... Q96GC5 32812867
    596340 6zsd:g (3.7) BS01 rna ? GO:0003735 ... Q13405 32812867
    596341 6zsd:i (3.7) BS01 rna ? GO:0003735 ... Q4U2R6 32812867
    596342 6zsd:j (3.7) BS01 rna ? GO:0003735 ... Q86TS9 32812867
    596343 6zsd:l (3.7) BS01 rna ? GO:0003723 ... Q6P161 32812867
    596344 6zsd:o (3.7) BS01 rna ? GO:0003735 ... Q9BQC6 32812867
    596345 6zsd:q (3.7) BS01 rna ? GO:0005515 ... Q8TAE8 32812867
    596346 6zsd:q (3.7) BS02 rna ? GO:0005515 ... Q8TAE8 32812867
    596347 6zsd:r (3.7) BS01 rna ? GO:0003735 ... Q9NVS2 32812867
    596348 6zsd:s (3.7) BS01 rna ? GO:0003723 ... Q9NP92 32812867
    596349 6zsd:t1 (3.7) BS01 peptide ? GO:0003723 ... P52815 32812867
    596350 6zsd:t3 (3.7) BS01 peptide ? GO:0003723 ... P52815 32812867
    596351 6zsd:t3 (3.7) BS02 peptide ? GO:0003723 ... P52815 32812867
    596352 6zse:0 (5.0) BS01 rna ? GO:0003723 ... Q9BYC8 32812867
    596353 6zse:0 (5.0) BS02 ZN ? GO:0003723 ... Q9BYC8 32812867
    596354 6zse:1 (5.0) BS01 rna ? GO:0003735 ... O75394 32812867
    596355 6zse:1 (5.0) BS02 rna ? GO:0003735 ... O75394 32812867
    596356 6zse:2 (5.0) BS01 rna ? GO:0003735 ... Q9BQ48 32812867
    596357 6zse:3 (5.0) BS01 rna ? GO:0003735 ... Q9NZE8 32812867
    596358 6zse:4 (5.0) BS01 rna ? GO:0003735 ... Q9P0J6 32812867
    596359 6zse:4 (5.0) BS02 ZN ? GO:0003735 ... Q9P0J6 32812867
    596360 6zse:5 (5.0) BS01 rna ? GO:0003723 ... Q9BZE1 32812867
    596361 6zse:6 (5.0) BS01 rna ? GO:0005515 ... Q96DV4 32812867
    596362 6zse:6 (5.0) BS02 rna ? GO:0005515 ... Q96DV4 32812867
    596363 6zse:8 (5.0) BS01 rna ? GO:0003723 ... Q9NQ50 32812867
    596364 6zse:9 (5.0) BS01 rna ? GO:0003723 ... Q8IXM3 32812867
    596365 6zse:A0 (5.0) BS01 rna ? GO:0003735 ... P82930 32812867
    596366 6zse:A2 (5.0) BS01 rna ? GO:0001650 ... Q96BP2 32812867
    596367 6zse:A3 (5.0) BS01 rna ? GO:0005515 ... Q9NWT8 32812867
    596368 6zse:AB (5.0) BS01 rna ? GO:0003735 ... Q9Y399 32812867
    596369 6zse:AB (5.0) BS02 ZN ? GO:0003735 ... Q9Y399 32812867
    596370 6zse:AC (5.0) BS01 rna ? GO:0003723 ... Q96EL2 32812867
    596371 6zse:AD (5.0) BS01 rna ? GO:0003723 ... P82675 32812867
    596372 6zse:AD (5.0) BS02 rna ? GO:0003723 ... P82675 32812867
    596373 6zse:AE (5.0) BS01 rna ? GO:0003735 ... P82932 32812867
    596374 6zse:AF (5.0) BS01 rna ? GO:0000028 ... Q9Y2R9 32812867
    596375 6zse:AG (5.0) BS01 rna ? GO:0003723 ... P82933 32812867
    596376 6zse:AH (5.0) BS01 rna ? GO:0005739 ... P82664 32812867
    596377 6zse:AI (5.0) BS01 rna ? GO:0003723 ... P82912 32812867
    596378 6zse:AJ (5.0) BS01 rna ? GO:0003723 ... O15235 32812867
    596379 6zse:AK (5.0) BS01 rna ? GO:0003723 ... O60783 32812867
    596380 6zse:AL (5.0) BS01 rna ? GO:0003723 ... P82914 32812867
    596381 6zse:AM (5.0) BS01 rna ? GO:0003735 ... Q9Y3D3 32812867
    596382 6zse:AN (5.0) BS01 rna ? GO:0003735 ... Q9Y2R5 32812867
    596383 6zse:AO (5.0) BS01 rna ? GO:0003735 ... Q9Y676 32812867
    596384 6zse:AO (5.0) BS02 ZN ? GO:0003735 ... Q9Y676 32812867
    596385 6zse:AP (5.0) BS01 rna ? GO:0003735 ... Q9Y3D5 32812867
    596386 6zse:AQ (5.0) BS01 rna ? GO:0003723 ... P82921 32812867
    596387 6zse:AS (5.0) BS01 rna ? GO:0003723 ... Q9Y3D9 32812867
    596388 6zse:AT (5.0) BS01 rna ? GO:0003735 ... P82663 32812867
    596389 6zse:AT (5.0) BS02 ZN ? GO:0003735 ... P82663 32812867
    596390 6zse:AU (5.0) BS01 rna ? GO:0003723 ... Q9BYN8 32812867
    596391 6zse:AV (5.0) BS01 rna ? GO:0000049 ... Q92552 32812867
    596392 6zse:AX (5.0) BS01 rna ? GO:0003723 ... P51398 32812867
    596393 6zse:AX (5.0) BS02 GTP ? GO:0003723 ... P51398 32812867
    596394 6zse:AZ (5.0) BS01 rna ? GO:0003735 ... Q9Y291 32812867
    596395 6zse:XD (5.0) BS01 rna ? GO:0003723 ... Q5T653 32812867
    596396 6zse:XE (5.0) BS01 rna ? GO:0003723 ... P09001 32812867
    596397 6zse:XF (5.0) BS01 rna ? GO:0003723 ... Q9BYD3 32812867
    596398 6zse:XH (5.0) BS01 rna ? GO:0003723 ... Q9BYD2 32812867
    596399 6zse:XI (5.0) BS01 rna ? GO:0003723 ... Q7Z7H8 32812867
    596400 6zse:XI (5.0) BS02 peptide ? GO:0003723 ... Q7Z7H8 32812867

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).