SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    597201 6zu1:BU (3.0) BS01 rna ? GO:0000027 ... P0ADZ0 32820062
    597202 6zu1:BV (3.0) BS01 rna ? GO:0000027 ... P60624 32820062
    597203 6zu1:BW (3.0) BS01 rna ? GO:0000027 ... P68919 32820062
    597204 6zu1:BW (3.0) BS02 rna ? GO:0000027 ... P68919 32820062
    597205 6zu1:BX (3.0) BS01 rna ? GO:0000027 ... P0A7L8 32820062
    597206 6zu1:BX (3.0) BS02 rna ? GO:0000027 ... P0A7L8 32820062
    597207 6zu1:BY (3.0) BS01 rna ? GO:0000027 ... P0A7M2 32820062
    597208 6zu1:BZ (3.0) BS01 rna ? GO:0000027 ... P0A7M6 32820062
    597209 6zu1:CC (3.0) BS01 rna 2.7.7.6 GO:0000345 ... P0A8V2 32820062
    597210 6zu1:CC (3.0) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 32820062
    597211 6zu1:CC (3.0) BS03 dna 2.7.7.6 GO:0000345 ... P0A8V2 32820062
    597212 6zu1:CD (3.0) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 32820062
    597213 6zu1:CD (3.0) BS02 MG 2.7.7.6 GO:0000287 ... P0A8T7 32820062
    597214 6zu1:CD (3.0) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 32820062
    597215 6zu1:CD (3.0) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 32820062
    597216 6zu2:AAA (1.55) BS01 FUC ? GO:0030246 ... B3VS76 35323921
    597217 6zu2:BBB (1.55) BS01 FUC ? GO:0030246 ... B3VS76 35323921
    597218 6zu2:CCC (1.55) BS01 FUC ? GO:0030246 ... B3VS76 35323921
    597219 6zu2:DDD (1.55) BS01 FUC ? GO:0030246 ... B3VS76 35323921
    597220 6zu2:EEE (1.55) BS01 FUC ? GO:0030246 ... B3VS76 35323921
    597221 6zu2:FFF (1.55) BS01 FUC ? GO:0030246 ... B3VS76 35323921
    597222 6zu4:A (2.46) BS01 AR6 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 33214841
    597223 6zu4:A (2.46) BS02 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 33214841
    597224 6zu4:B (2.46) BS01 AR6 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 33214841
    597225 6zu4:B (2.46) BS02 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 33214841
    597226 6zu4:B (2.46) BS03 115 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 33214841
    597227 6zu5:LA0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597228 6zu5:LA0 (2.9) BS02 rna N/A GO:0003735 ... N/A 33125369
    597229 6zu5:LA0 (2.9) BS03 MG N/A GO:0003735 ... N/A 33125369
    597230 6zu5:LAA (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597231 6zu5:LB0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597232 6zu5:LBB (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597233 6zu5:LC0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597234 6zu5:LCC (2.9) BS01 rna N/A GO:0003723 ... N/A 33125369
    597235 6zu5:LCC (2.9) BS02 rna N/A GO:0003723 ... N/A 33125369
    597236 6zu5:LD0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597237 6zu5:LD0 (2.9) BS02 rna N/A GO:0003735 ... N/A 33125369
    597238 6zu5:LDD (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597239 6zu5:LE0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597240 6zu5:LEE (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597241 6zu5:LF0 (2.9) BS01 rna N/A N/A N/A 33125369
    597242 6zu5:LF0 (2.9) BS02 rna N/A N/A N/A 33125369
    597243 6zu5:LFF (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597244 6zu5:LG0 (2.9) BS01 rna N/A GO:0003723 ... N/A 33125369
    597245 6zu5:LGG (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597246 6zu5:LGG (2.9) BS02 ZN N/A GO:0003735 ... N/A 33125369
    597247 6zu5:LH0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597248 6zu5:LH0 (2.9) BS02 AMP N/A GO:0003735 ... N/A 33125369
    597249 6zu5:LHH (2.9) BS01 rna N/A GO:0000463 ... N/A 33125369
    597250 6zu5:LI0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597251 6zu5:LI0 (2.9) BS02 rna N/A GO:0003735 ... N/A 33125369
    597252 6zu5:LII (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597253 6zu5:LJ0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597254 6zu5:LJ0 (2.9) BS02 rna N/A GO:0003735 ... N/A 33125369
    597255 6zu5:LJJ (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597256 6zu5:LJJ (2.9) BS02 ZN N/A GO:0003735 ... N/A 33125369
    597257 6zu5:LJJ (2.9) BS03 MG N/A GO:0003735 ... N/A 33125369
    597258 6zu5:LL0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597259 6zu5:LLL (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597260 6zu5:LM0 (2.9) BS01 rna N/A N/A N/A 33125369
    597261 6zu5:LMM (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597262 6zu5:LMM (2.9) BS02 ZN N/A GO:0003735 ... N/A 33125369
    597263 6zu5:LN0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597264 6zu5:LN0 (2.9) BS02 MG N/A GO:0003735 ... N/A 33125369
    597265 6zu5:LNN (2.9) BS01 rna N/A N/A N/A 33125369
    597266 6zu5:LNN (2.9) BS02 rna N/A N/A N/A 33125369
    597267 6zu5:LO0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597268 6zu5:LOO (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597269 6zu5:LOO (2.9) BS02 ZN N/A GO:0003735 ... N/A 33125369
    597270 6zu5:LP0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597271 6zu5:LPP (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597272 6zu5:LPP (2.9) BS02 ZN N/A GO:0003735 ... N/A 33125369
    597273 6zu5:LQ0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597274 6zu5:LR0 (2.9) BS01 rna N/A GO:0003723 ... N/A 33125369
    597275 6zu5:LS0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597276 6zu5:LS0 (2.9) BS02 rna N/A GO:0003735 ... N/A 33125369
    597277 6zu5:LT0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597278 6zu5:LT0 (2.9) BS02 rna N/A GO:0003735 ... N/A 33125369
    597279 6zu5:LU0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597280 6zu5:LV0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597281 6zu5:LW0 (2.9) BS01 rna N/A N/A N/A 33125369
    597282 6zu5:LW0 (2.9) BS02 rna N/A N/A N/A 33125369
    597283 6zu5:LX0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597284 6zu5:LY0 (2.9) BS01 rna N/A GO:0003723 ... N/A 33125369
    597285 6zu5:LZ0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597286 6zu5:SA0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597287 6zu5:SAA (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597288 6zu5:SAA (2.9) BS02 ZN N/A GO:0003735 ... N/A 33125369
    597289 6zu5:SB0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597290 6zu5:SBB (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597291 6zu5:SBB (2.9) BS02 ZN N/A GO:0003735 ... N/A 33125369
    597292 6zu5:SC0 (2.9) BS01 rna N/A GO:0003723 ... N/A 33125369
    597293 6zu5:SCC (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597294 6zu5:SD0 (2.9) BS01 rna N/A GO:0003723 ... N/A 33125369
    597295 6zu5:SDD (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597296 6zu5:SDD (2.9) BS02 ZN N/A GO:0003735 ... N/A 33125369
    597297 6zu5:SE0 (2.9) BS01 rna N/A GO:0003723 ... N/A 33125369
    597298 6zu5:SEE (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597299 6zu5:SF0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597300 6zu5:SG0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597301 6zu5:SGG (2.9) BS01 rna N/A GO:0043022 ... N/A 33125369
    597302 6zu5:SH0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597303 6zu5:SI0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597304 6zu5:SI0 (2.9) BS02 rna N/A GO:0003735 ... N/A 33125369
    597305 6zu5:SJ0 (2.9) BS01 rna N/A GO:0003723 ... N/A 33125369
    597306 6zu5:SK0 (2.9) BS01 rna N/A N/A N/A 33125369
    597307 6zu5:SL0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597308 6zu5:SN0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597309 6zu5:SO0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597310 6zu5:SP0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597311 6zu5:SQ0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597312 6zu5:SR0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597313 6zu5:SS0 (2.9) BS01 rna N/A GO:0003676 ... N/A 33125369
    597314 6zu5:ST0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597315 6zu5:SU0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597316 6zu5:SW0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597317 6zu5:SX0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597318 6zu5:SY0 (2.9) BS01 rna N/A GO:0003735 ... N/A 33125369
    597319 6zu5:SZ0 (2.9) BS01 rna N/A N/A N/A 33125369
    597320 6zu6:A (1.15) BS01 CU 1.7.2.1 GO:0005507 ... P25006 34094452
    597321 6zu6:A (1.15) BS02 CU 1.7.2.1 GO:0005507 ... P25006 34094452
    597322 6zu6:A (1.15) BS03 NO2 1.7.2.1 GO:0005507 ... P25006 34094452
    597323 6zu6:A (1.15) BS04 NO2 1.7.2.1 GO:0005507 ... P25006 34094452
    597324 6zu8:A (1.95) BS01 ZN ? GO:0000978 ... O15178 N/A
    597325 6zu8:A (1.95) BS02 0WN ? GO:0000978 ... O15178 N/A
    597326 6zu9:A (6.2) BS01 rna ? GO:0001677 ... P38912 33289941
    597327 6zu9:B (6.2) BS01 rna ? GO:0000054 ... P05750 33289941
    597328 6zu9:C (6.2) BS01 rna ? GO:0000028 ... P26783 33289941
    597329 6zu9:C (6.2) BS02 MG ? GO:0000028 ... P26783 33289941
    597330 6zu9:D (6.2) BS01 rna ? GO:0000054 ... Q08745 33289941
    597331 6zu9:E (6.2) BS01 rna ? GO:0000028 ... Q01855 33289941
    597332 6zu9:F (6.2) BS01 rna ? GO:0000028 ... P48589 33289941
    597333 6zu9:H (6.2) BS01 rna ? GO:0000462 ... P0CX51 33289941
    597334 6zu9:I (6.2) BS01 rna ? GO:0000028 ... P02407 33289941
    597335 6zu9:J (6.2) BS01 rna ? GO:0000054 ... P0CX55 33289941
    597336 6zu9:K (6.2) BS01 rna ? GO:0000028 ... P07280 33289941
    597337 6zu9:L (6.2) BS01 rna ? GO:0000462 ... P38701 33289941
    597338 6zu9:M (6.2) BS01 rna ? GO:0002181 ... Q3E792 33289941
    597339 6zu9:N (6.2) BS01 rna ? GO:0002181 ... P41057 33289941
    597340 6zu9:O (6.2) BS01 rna ? GO:0000028 ... P05759 33289941
    597341 6zu9:O (6.2) BS02 ZN ? GO:0000028 ... P05759 33289941
    597342 6zu9:P (6.2) BS01 rna ? GO:0000028 ... P32905 33289941
    597343 6zu9:Q (6.2) BS01 rna ? GO:0000462 ... P33442 33289941
    597344 6zu9:R (6.2) BS01 rna ? GO:0000054 ... P25443 33289941
    597345 6zu9:S (6.2) BS01 rna ? GO:0002181 ... P0CX35 33289941
    597346 6zu9:T (6.2) BS01 rna ? GO:0000462 ... P0CX37 33289941
    597347 6zu9:U (6.2) BS01 rna ? GO:0002181 ... P26786 33289941
    597348 6zu9:V (6.2) BS01 rna ? GO:0000462 ... P0CX39 33289941
    597349 6zu9:W (6.2) BS01 rna ? GO:0000462 ... O13516 33289941
    597350 6zu9:X (6.2) BS01 rna ? GO:0000028 ... P0CX47 33289941
    597351 6zu9:Y (6.2) BS01 rna ? GO:0000462 ... P05756 33289941
    597352 6zu9:Z (6.2) BS01 rna ? GO:0000028 ... P06367 33289941
    597353 6zu9:b (6.2) BS01 rna ? GO:0002181 ... P0C0W1 33289941
    597354 6zu9:c (6.2) BS01 rna ? GO:0000462 ... P0CX29 33289941
    597355 6zu9:d (6.2) BS01 rna ? GO:0000462 ... P0CX31 33289941
    597356 6zu9:e (6.2) BS01 rna ? GO:0000054 ... P39938 33289941
    597357 6zu9:f (6.2) BS01 rna ? GO:0000028 ... P35997 33289941
    597358 6zu9:g (6.2) BS01 rna ? GO:0002181 ... P0CX33 33289941
    597359 6zu9:h (6.2) BS01 rna ? GO:0001965 ... P38011 33289941
    597360 6zu9:i (6.2) BS01 rna ? GO:0000028 ... P0C0X0 33289941
    597361 6zu9:k (6.2) BS01 rna ? GO:0000054 ... Q03195 33289941
    597362 6zu9:k (6.2) BS02 ADP ? GO:0000054 ... Q03195 33289941
    597363 6zu9:k (6.2) BS03 ATP ? GO:0000054 ... Q03195 33289941
    597364 6zu9:k (6.2) BS04 SF4 ? GO:0000054 ... Q03195 33289941
    597365 6zu9:k (6.2) BS05 SF4 ? GO:0000054 ... Q03195 33289941
    597366 6zu9:m (6.2) BS01 rna ? GO:0001732 ... P38431 33289941
    597367 6zu9:m (6.2) BS02 rna ? GO:0001732 ... P38431 33289941
    597368 6zu9:p (6.2) BS01 rna ? GO:0001732 ... P06103 33289941
    597369 6zu9:q (6.2) BS01 rna ? GO:0001732 ... P32497 33289941
    597370 6zua:A (1.14) BS01 CU 1.7.2.1 GO:0005507 ... P25006 34094452
    597371 6zua:A (1.14) BS02 CU 1.7.2.1 GO:0005507 ... P25006 34094452
    597372 6zua:A (1.14) BS03 NO2 1.7.2.1 GO:0005507 ... P25006 34094452
    597373 6zua:A (1.14) BS04 NO 1.7.2.1 GO:0005507 ... P25006 34094452
    597374 6zub:A (1.08) BS01 CU 1.7.2.1 GO:0005507 ... P25006 34094452
    597375 6zub:A (1.08) BS02 CU 1.7.2.1 GO:0005507 ... P25006 34094452
    597376 6zub:A (1.08) BS03 NO2 1.7.2.1 GO:0005507 ... P25006 34094452
    597377 6zub:A (1.08) BS04 NO2 1.7.2.1 GO:0005507 ... P25006 34094452
    597378 6zuc:A (2.37) BS01 QPZ ? GO:0004864 ... A0A067E666 36897942
    597379 6zuc:B (2.37) BS01 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    597380 6zuc:B (2.37) BS02 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    597381 6zuc:B (2.37) BS03 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    597382 6zuc:B (2.37) BS04 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    597383 6zud:A (1.1) BS01 CU 1.7.2.1 GO:0005507 ... P25006 34094452
    597384 6zud:A (1.1) BS02 CU 1.7.2.1 GO:0005507 ... P25006 34094452
    597385 6zud:A (1.1) BS03 NO2 1.7.2.1 GO:0005507 ... P25006 34094452
    597386 6zuf:A (1.798) BS01 peptide ? GO:0005634 ... Q9Y294 33741589
    597387 6zuf:B (1.798) BS01 peptide ? GO:0005634 ... Q9Y294 33741589
    597388 6zug:H (1.8) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 33108181
    597389 6zug:H (1.8) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 33108181
    597390 6zug:H (1.8) BS03 QPW 3.4.21.5 GO:0004252 ... P00734 33108181 MOAD: ic50=12nM
    597391 6zuh:H (1.7) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 33108181
    597392 6zuh:H (1.7) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 33108181
    597393 6zuh:H (1.7) BS03 N6H 3.4.21.5 GO:0004252 ... P00734 33108181 MOAD: ic50=27nM
    597394 6zuj:AAA (1.8) BS01 CA 4.3.1.17
    4.3.1.18
    5.1.1.18
    GO:0000287 ... Q9GZT4 35410329
    597395 6zuj:BBB (1.8) BS01 CA 4.3.1.17
    4.3.1.18
    5.1.1.18
    GO:0000287 ... Q9GZT4 35410329
    597396 6zuj:CCC (1.8) BS01 CA 4.3.1.17
    4.3.1.18
    5.1.1.18
    GO:0000287 ... Q9GZT4 35410329
    597397 6zuj:DDD (1.8) BS01 CA 4.3.1.17
    4.3.1.18
    5.1.1.18
    GO:0000287 ... Q9GZT4 35410329
    597398 6zuk:A (2.03) BS01 QQ7 ? GO:0030246 ... A0A0S4TLR1 N/A
    597399 6zuk:B (2.03) BS01 QQ7 ? GO:0030246 ... A0A0S4TLR1 N/A
    597400 6zuk:B (2.03) BS02 ZN ? GO:0030246 ... A0A0S4TLR1 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).