SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    597601 6zvi:i (3.0) BS01 rna ? GO:0003735 ... P32905 32744497
    597602 6zvi:j (3.0) BS01 rna ? GO:0003735 ... P33442 32744497
    597603 6zvi:k (3.0) BS01 rna ? GO:0003723 ... P25443 32744497
    597604 6zvi:l (3.0) BS01 rna ? GO:0000054 ... P05750 32744497
    597605 6zvi:l (3.0) BS02 rna ? GO:0000054 ... P05750 32744497
    597606 6zvi:m (3.0) BS01 rna ? GO:0002181 ... P0CX35 32744497
    597607 6zvi:n (3.0) BS01 rna ? GO:0000028 ... P26783 32744497
    597608 6zvi:o (3.0) BS01 rna ? GO:0000462 ... P0CX37 32744497
    597609 6zvi:p (3.0) BS01 rna ? GO:0002181 ... P26786 32744497
    597610 6zvi:q (3.0) BS01 rna ? GO:0000462 ... P0CX39 32744497
    597611 6zvi:r (3.0) BS01 rna ? GO:0000462 ... O13516 32744497
    597612 6zvi:s (3.0) BS01 rna ? N/A Q08745 32744497
    597613 6zvi:t (3.0) BS01 rna ? GO:0000028 ... P0CX47 32744497
    597614 6zvi:u (3.0) BS01 rna ? GO:0003735 ... P48589 32744497
    597615 6zvi:v (3.0) BS01 rna ? GO:0000462 ... P05756 32744497
    597616 6zvi:w (3.0) BS01 rna ? GO:0000028 ... P39516 32744497
    597617 6zvi:x (3.0) BS01 rna ? GO:0003723 ... Q01855 32744497
    597618 6zvi:y (3.0) BS01 rna ? GO:0000462 ... P0CX51 32744497
    597619 6zvi:z (3.0) BS01 rna ? GO:0000028 ... P02407 32744497
    597620 6zvj:1 (3.8) BS01 rna 3.6.5.- GO:0003924 ... P61221 33289941
    597621 6zvj:1 (3.8) BS02 SF4 3.6.5.- GO:0003924 ... P61221 33289941
    597622 6zvj:1 (3.8) BS03 SF4 3.6.5.- GO:0003924 ... P61221 33289941
    597623 6zvj:1 (3.8) BS04 ADP 3.6.5.- GO:0003924 ... P61221 33289941
    597624 6zvj:1 (3.8) BS05 ATP 3.6.5.- GO:0003924 ... P61221 33289941
    597625 6zvj:1 (3.8) BS06 MG 3.6.5.- GO:0003924 ... P61221 33289941
    597626 6zvj:B (3.8) BS01 rna ? GO:0003676 ... P55884 33289941
    597627 6zvj:C (3.8) BS01 rna ? GO:0003723 ... B4DVU3 33289941
    597628 6zvj:N (3.8) BS01 rna ? GO:0003743 ... P41567 33289941
    597629 6zvj:P (3.8) BS01 rna ? N/A P62851 33289941
    597630 6zvj:Q (3.8) BS01 rna ? GO:0003735 ... P62854 33289941
    597631 6zvj:Q (3.8) BS02 ZN ? GO:0003735 ... P62854 33289941
    597632 6zvj:R (3.8) BS01 rna ? GO:0000028 ... P42677 33289941
    597633 6zvj:S (3.8) BS01 rna ? GO:0003735 ... P62857 33289941
    597634 6zvj:T (3.8) BS01 rna ? GO:0003735 ... P62861 33289941
    597635 6zvj:U (3.8) BS01 rna ? GO:0003735 ... P62979 33289941
    597636 6zvj:U (3.8) BS02 ZN ? GO:0003735 ... P62979 33289941
    597637 6zvj:V (3.8) BS01 rna ? GO:0001891 ... P63244 33289941
    597638 6zvj:a (3.8) BS01 rna ? GO:0003735 ... P08865 33289941
    597639 6zvj:b (3.8) BS01 rna 4.2.99.18 GO:0000977 ... P23396 33289941
    597640 6zvj:c (3.8) BS01 rna ? GO:0002181 ... P46781 33289941
    597641 6zvj:d (3.8) BS01 rna ? GO:0003723 ... P15880 33289941
    597642 6zvj:e (3.8) BS01 rna ? GO:0000028 ... P46782 33289941
    597643 6zvj:f (3.8) BS01 rna ? GO:0002181 ... P62244 33289941
    597644 6zvj:g (3.8) BS01 rna ? GO:0000462 ... P62249 33289941
    597645 6zvj:h (3.8) BS01 rna ? GO:0003723 ... P60866 33289941
    597646 6zvj:i (3.8) BS01 rna ? GO:0003735 ... A0A2R8Y811 33289941
    597647 6zvj:j (3.8) BS01 rna ? GO:0002181 ... P62266 33289941
    597648 6zvj:k (3.8) BS01 rna ? GO:0002181 ... P62269 33289941
    597649 6zvj:l (3.8) BS01 rna ? GO:0002181 ... P62273 33289941
    597650 6zvj:l (3.8) BS02 ZN ? GO:0002181 ... P62273 33289941
    597651 6zvj:m (3.8) BS01 rna ? GO:0002181 ... P62277 33289941
    597652 6zvj:n (3.8) BS01 rna ? GO:0002181 ... P62280 33289941
    597653 6zvj:o (3.8) BS01 rna ? GO:0003723 ... P62841 33289941
    597654 6zvj:p (3.8) BS01 rna ? GO:0003735 ... P61247 33289941
    597655 6zvj:q (3.8) BS01 rna ? GO:0002181 ... P62701 33289941
    597656 6zvj:r (3.8) BS01 rna ? GO:0003735 ... P62753 33289941
    597657 6zvj:s (3.8) BS01 rna ? GO:0001843 ... P62081 33289941
    597658 6zvj:t (3.8) BS01 rna ? GO:0000462 ... P62241 33289941
    597659 6zvj:u (3.8) BS01 rna ? N/A P46783 33289941
    597660 6zvj:v (3.8) BS01 rna ? GO:0003735 ... P25398 33289941
    597661 6zvj:w (3.8) BS01 rna ? GO:0002181 ... P08708 33289941
    597662 6zvj:x (3.8) BS01 rna ? GO:0000028 ... P39019 33289941
    597663 6zvj:z (3.8) BS01 rna ? GO:0003735 ... E7ETK0 33289941
    597664 6zvk:12 (3.49) BS01 rna ? GO:0002181 ... G1T0C1 33296660
    597665 6zvk:12 (3.49) BS02 rna ? GO:0002181 ... G1T0C1 33296660
    597666 6zvk:13 (3.49) BS01 rna ? GO:0003723 ... G1TDL2 33296660
    597667 6zvk:22 (3.49) BS01 rna ? GO:0003735 ... G1TXF6 33296660
    597668 6zvk:32 (3.49) BS01 rna ? GO:0003723 ... Q3T0W9 33296660
    597669 6zvk:32 (3.49) BS02 rna ? GO:0003723 ... Q3T0W9 33296660
    597670 6zvk:42 (3.49) BS01 rna ? GO:0003723 ... G1SKZ8 33296660
    597671 6zvk:42 (3.49) BS02 rna ? GO:0003723 ... G1SKZ8 33296660
    597672 6zvk:52 (3.49) BS01 rna ? GO:0003723 ... G1TL06 33296660
    597673 6zvk:62 (3.49) BS01 rna ? GO:0002181 ... Q3T003 33296660
    597674 6zvk:62 (3.49) BS02 rna ? GO:0002181 ... Q3T003 33296660
    597675 6zvk:72 (3.49) BS01 rna ? GO:0003735 ... G1SHQ2 33296660
    597676 6zvk:72 (3.49) BS02 rna ? GO:0003735 ... G1SHQ2 33296660
    597677 6zvk:82 (3.49) BS01 rna ? GO:0003735 ... G1TSG1 33296660
    597678 6zvk:92 (3.49) BS01 rna ? GO:0002181 ... G1TT27 33296660
    597679 6zvk:A2 (3.49) BS01 rna ? GO:0000463 ... G1SIT5 33296660
    597680 6zvk:A2 (3.49) BS02 rna ? GO:0000463 ... G1SIT5 33296660
    597681 6zvk:A3 (3.49) BS01 rna ? GO:0003723 ... G1U0Q2 33296660
    597682 6zvk:A3 (3.49) BS02 rna ? GO:0003723 ... G1U0Q2 33296660
    597683 6zvk:B2 (3.49) BS01 rna ? GO:0003735 ... G1TTQ5 33296660
    597684 6zvk:B3 (3.49) BS01 rna ? GO:0000462 ... G1SGX4 33296660
    597685 6zvk:C2 (3.49) BS01 rna ? GO:0003735 ... U3KPD5 33296660
    597686 6zvk:C2 (3.49) BS02 rna ? GO:0003735 ... U3KPD5 33296660
    597687 6zvk:C2 (3.49) BS03 ZN ? GO:0003735 ... U3KPD5 33296660
    597688 6zvk:C3 (3.49) BS01 rna ? GO:0003735 ... G1TU13 33296660
    597689 6zvk:D2 (3.49) BS01 rna ? GO:0003735 ... G1SYU7 33296660
    597690 6zvk:D2 (3.49) BS02 rna ? GO:0003735 ... G1SYU7 33296660
    597691 6zvk:E2 (3.49) BS01 rna ? GO:0003735 ... P63048 33296660
    597692 6zvk:E2 (3.49) BS02 ZN ? GO:0003735 ... P63048 33296660
    597693 6zvk:E3 (3.49) BS01 rna ? N/A G1T168 33296660
    597694 6zvk:F2 (3.49) BS01 rna ? GO:0003735 ... G1T040 33296660
    597695 6zvk:F2 (3.49) BS02 ZN ? GO:0003735 ... G1T040 33296660
    597696 6zvk:F3 (3.49) BS01 rna ? GO:0003735 ... G1SP51 33296660
    597697 6zvk:G2 (3.49) BS01 rna ? GO:0000027 ... P19949 33296660
    597698 6zvk:G2 (3.49) BS02 rna ? GO:0000027 ... P19949 33296660
    597699 6zvk:G3 (3.49) BS01 rna ? GO:0003735 ... G1TRM4 33296660
    597700 6zvk:G5 (3.49) BS01 rna ? GO:0003676 ... G1TPG3 33296660
    597701 6zvk:H2 (3.49) BS01 rna ? GO:0003735 ... G1SCJ6 33296660
    597702 6zvk:H2 (3.49) BS02 rna ? GO:0003735 ... G1SCJ6 33296660
    597703 6zvk:H3 (3.49) BS01 rna ? GO:0002181 ... G1U7M4 33296660
    597704 6zvk:H3 (3.49) BS02 ZN ? GO:0002181 ... G1U7M4 33296660
    597705 6zvk:H5 (3.49) BS01 rna ? GO:0000028 ... G1TN62 33296660
    597706 6zvk:I2 (3.49) BS01 rna ? GO:0003735 ... G1SY53 33296660
    597707 6zvk:I2 (3.49) BS02 ZN ? GO:0003735 ... G1SY53 33296660
    597708 6zvk:I3 (3.49) BS01 rna ? GO:0003723 ... A0A5F9CX53 33296660
    597709 6zvk:I5 (3.49) BS01 rna ? GO:0003735 ... A0A5F9CBF4 33296660
    597710 6zvk:J2 (3.49) BS01 rna ? GO:0003735 ... G1U7L1 33296660
    597711 6zvk:J5 (3.49) BS01 rna ? GO:0003735 ... G1TG89 33296660
    597712 6zvk:K2 (3.49) BS01 rna ? N/A G1SPK4 33296660
    597713 6zvk:L2 (3.49) BS01 rna ? GO:0003735 ... B7NZQ2 33296660
    597714 6zvk:L2 (3.49) BS02 rna ? GO:0003735 ... B7NZQ2 33296660
    597715 6zvk:L3 (3.49) BS01 rna ? GO:0003735 ... G1TZ76 33296660
    597716 6zvk:M2 (3.49) BS01 rna ? GO:0003723 ... G1SMR7 33296660
    597717 6zvk:M3 (3.49) BS01 rna ? N/A G1TDB3 33296660
    597718 6zvk:N3 (3.49) BS01 rna ? GO:0003723 ... U3KMN4 33296660
    597719 6zvk:N3 (3.49) BS02 rna ? GO:0003723 ... U3KMN4 33296660
    597720 6zvk:O3 (3.49) BS01 rna ? GO:0003735 ... Q56JV1 33296660
    597721 6zvk:O3 (3.49) BS02 ZN ? GO:0003735 ... Q56JV1 33296660
    597722 6zvk:P3 (3.49) BS01 rna ? GO:0003735 ... A6H769 33296660
    597723 6zvk:Q3 (3.49) BS01 rna ? GO:0003735 ... P79781 33296660
    597724 6zvk:R2 (3.49) BS01 rna ? GO:0003735 ... G1U1N5 33296660
    597725 6zvk:S2 (3.49) BS01 rna ? GO:0002181 ... Q07020 33296660
    597726 6zvk:T2 (3.49) BS01 rna ? GO:0003735 ... G1SKF7 33296660
    597727 6zvk:T3 (3.49) BS01 rna ? GO:0003735 ... G1SZ47 33296660
    597728 6zvk:U2 (3.49) BS01 rna ? GO:0000463 ... G1SV32 33296660
    597729 6zvk:U2 (3.49) BS02 rna ? GO:0000463 ... G1SV32 33296660
    597730 6zvk:U3 (3.49) BS01 rna ? GO:0003735 ... G1TJH8 33296660
    597731 6zvk:V2 (3.49) BS01 rna ? GO:0000470 ... P62424 33296660
    597732 6zvk:V2 (3.49) BS02 rna ? GO:0000470 ... P62424 33296660
    597733 6zvk:V3 (3.49) BS01 rna ? GO:0003735 ... G1SS70 33296660
    597734 6zvk:W2 (3.49) BS01 rna ? GO:0002181 ... G1SWI6 33296660
    597735 6zvk:W3 (3.49) BS01 rna N/A GO:0003723 ... N/A 33296660
    597736 6zvk:X2 (3.49) BS01 rna ? GO:0003735 ... B7NZQ2 33296660
    597737 6zvk:X2 (3.49) BS02 rna ? GO:0003735 ... B7NZQ2 33296660
    597738 6zvk:Y2 (3.49) BS01 rna ? GO:0003735 ... G1TUB8 33296660
    597739 6zvk:Y2 (3.49) BS02 rna ? GO:0003735 ... G1TUB8 33296660
    597740 6zvk:Y3 (3.49) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 33296660
    597741 6zvk:Y3 (3.49) BS02 rna 4.2.99.18 GO:0003677 ... G1TNM3 33296660
    597742 6zvk:Z2 (3.49) BS01 rna ? GO:0003723 ... G1SZ12 33296660
    597743 6zvk:a3 (3.49) BS01 rna ? GO:0001891 ... G1SJB4 33296660
    597744 6zvk:a5 (3.49) BS01 rna ? GO:0003735 ... G1T1F0 33296660
    597745 6zvk:a5 (3.49) BS02 rna ? GO:0003735 ... G1T1F0 33296660
    597746 6zvk:a7 (3.49) BS01 rna N/A GO:0003735 ... N/A 33296660
    597747 6zvk:b3 (3.49) BS01 rna ? GO:0003735 ... G1TM55 33296660
    597748 6zvk:c3 (3.49) BS01 rna ? GO:0003735 ... G1TJW1 33296660
    597749 6zvk:c3 (3.49) BS02 rna ? GO:0003735 ... G1TJW1 33296660
    597750 6zvk:d3 (3.49) BS01 rna ? GO:0003723 ... B7NZS8 33296660
    597751 6zvk:e3 (3.49) BS01 rna ? GO:0003735 ... G1SFR8 33296660
    597752 6zvk:f3 (3.49) BS01 rna ? GO:0000028 ... G1TIB4 33296660
    597753 6zvk:j3 (3.49) BS01 rna ? GO:0003723 ... G1TK17 33296660
    597754 6zvk:k2 (3.49) BS01 rna ? GO:0003735 ... G1T6D1 33296660
    597755 6zvk:l2 (3.49) BS01 rna ? GO:0003735 ... G1SE28 33296660
    597756 6zvk:m2 (3.49) BS01 rna ? GO:0003735 ... G1SE76 33296660
    597757 6zvk:m2 (3.49) BS02 rna ? GO:0003735 ... G1SE76 33296660
    597758 6zvk:o2 (3.49) BS01 rna ? GO:0003723 ... G1SQH0 33296660
    597759 6zvk:o2 (3.49) BS02 rna ? GO:0003723 ... G1SQH0 33296660
    597760 6zvk:p2 (3.49) BS01 rna ? GO:0003735 ... G1U001 33296660
    597761 6zvk:q2 (3.49) BS01 rna ? GO:0003735 ... G1SNY0 33296660
    597762 6zvk:r2 (3.49) BS01 rna ? GO:0003735 ... G1SGR6 33296660
    597763 6zvk:s3 (3.49) BS01 rna ? GO:0003735 ... P62866 33296660
    597764 6zvk:t2 (3.49) BS01 rna ? GO:0003735 ... G1SVW5 33296660
    597765 6zvk:t2 (3.49) BS02 rna ? GO:0003735 ... G1SVW5 33296660
    597766 6zvk:u2 (3.49) BS01 rna ? GO:0003735 ... G1SHG0 33296660
    597767 6zvk:v2 (3.49) BS01 rna ? GO:0003735 ... G1TUN8 33296660
    597768 6zvk:w2 (3.49) BS01 rna ? GO:0003729 ... G5B8P1 33296660
    597769 6zvk:x2 (3.49) BS01 rna ? GO:0000049 ... G1SF08 33296660
    597770 6zvk:y2 (3.49) BS01 rna ? GO:0003735 ... G1TXG5 33296660
    597771 6zvl:A (1.3) BS01 QR2 3.1.1.98 GO:0016787 ... Q6P988 33124429 MOAD: ic50=18nM
    597772 6zvm:AAA (1.8) BS01 GAL ? GO:0005576 ... Q8GR96 32957706
    597773 6zvm:AAA (1.8) BS02 SIA ? GO:0005576 ... Q8GR96 32957706
    597774 6zvn:AAA (2.5) BS01 peptide ? GO:0005576 ... Q8GR96 32957706
    597775 6zvp:A (4.0) BS01 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    597776 6zvp:A (4.0) BS02 LDP 1.14.16.2 GO:0004497 ... P07101 35013193
    597777 6zvp:B (4.0) BS01 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    597778 6zvp:B (4.0) BS02 LDP 1.14.16.2 GO:0004497 ... P07101 35013193
    597779 6zvp:C (4.0) BS01 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    597780 6zvp:C (4.0) BS02 LDP 1.14.16.2 GO:0004497 ... P07101 35013193
    597781 6zvp:D (4.0) BS01 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    597782 6zvp:D (4.0) BS02 LDP 1.14.16.2 GO:0004497 ... P07101 35013193
    597783 6zvq:A (2.03) BS01 peptide ? GO:0006355 ... Q15796 33416497
    597784 6zvu:A (1.4) BS01 OEH 3.8.1.5 GO:0003824 ... P0A3G3 N/A
    597785 6zvv:A (1.4) BS01 OEH 3.8.1.5 GO:0003824 ... P0A3G3 N/A
    597786 6zvv:B (1.4) BS01 OEH 3.8.1.5 GO:0003824 ... P0A3G3 N/A
    597787 6zvv:C (1.4) BS01 OEH 3.8.1.5 GO:0003824 ... P0A3G3 N/A
    597788 6zvv:D (1.4) BS01 OEH 3.8.1.5 GO:0003824 ... P0A3G3 N/A
    597789 6zvw:A (1.6) BS01 OEH 3.8.1.5 GO:0003824 ... P0A3G3 N/A
    597790 6zvw:B (1.6) BS01 OEH 3.8.1.5 GO:0003824 ... P0A3G3 N/A
    597791 6zvw:B (1.6) BS02 OEH 3.8.1.5 GO:0003824 ... P0A3G3 N/A
    597792 6zvx:A (1.4) BS01 OEH 3.8.1.5 GO:0003824 ... P0A3G3 N/A
    597793 6zvy:A (1.4) BS01 OEH 3.8.1.5 GO:0003824 ... P0A3G3 34916672
    597794 6zvy:B (1.4) BS01 OEH 3.8.1.5 GO:0003824 ... P0A3G3 34916672
    597795 6zvy:B (1.4) BS02 OEH 3.8.1.5 GO:0003824 ... P0A3G3 34916672
    597796 6zw0:A (3.05) BS01 peptide ? N/A Q57968 33688044
    597797 6zw0:A (3.05) BS02 peptide ? N/A Q57968 33688044
    597798 6zw0:A (3.05) BS03 QRE ? N/A Q57968 33688044
    597799 6zw0:B (3.05) BS01 peptide ? N/A Q57968 33688044
    597800 6zw0:B (3.05) BS02 peptide ? N/A Q57968 33688044

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).