SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    597801 6zw0:B (3.05) BS03 QRE ? N/A Q57968 33688044
    597802 6zw1:A (1.13) BS01 ZN ? N/A F8W4B7 33830764
    597803 6zw1:A (1.13) BS02 QRB ? N/A F8W4B7 33830764
    597804 6zw2:A (1.75) BS01 8YL 3.5.2.6 GO:0005886 ... Q7BNC2 N/A
    597805 6zw2:A (1.75) BS02 8YL 3.5.2.6 GO:0005886 ... Q7BNC2 N/A
    597806 6zw8:A (1.22) BS01 ACV 1.21.3.1 GO:0005506 ... P05326 34417180
    597807 6zw9:A (1.759) BS01 SF4 ? GO:0046872 ... A0A2H4Z949 32929873
    597808 6zw9:B (1.759) BS01 SF4 ? GO:0046872 ... A0A2H4Z949 32929873
    597809 6zwb:A (1.747) BS01 GTP 3.6.5.- GO:0000226 ... P81947 33275880
    597810 6zwb:A (1.747) BS02 QRN 3.6.5.- GO:0000226 ... P81947 33275880
    597811 6zwb:B (1.747) BS01 GDP ? GO:0000226 ... Q6B856 33275880
    597812 6zwb:B (1.747) BS02 QRN ? GO:0000226 ... Q6B856 33275880
    597813 6zwc:A (2.04) BS01 GTP 3.6.5.- GO:0000226 ... P81947 33275880
    597814 6zwc:B (2.04) BS01 GDP ? GO:0000226 ... Q6B856 33275880
    597815 6zwc:B (2.04) BS02 QRQ ? GO:0000226 ... Q6B856 33275880
    597816 6zwe:A (3.0) BS01 QRH 3.1.1.7 GO:0001507 ... P22303 33672269
    597817 6zwf:A (1.05) BS01 OXY 2.2.1.2 GO:0004801 ... Q5F6E9 33953398
    597818 6zwi:A (1.85) BS01 FUC 3.1.1.8 GO:0001540 ... P06276 33672269
    597819 6zwi:A (1.85) BS02 QRH 3.1.1.8 GO:0001540 ... P06276 33672269
    597820 6zwi:A (1.85) BS03 LEA 3.1.1.8 GO:0001540 ... P06276 33672269
    597821 6zwk:A (1.55) BS01 peptide N/A N/A N/A 34282773
    597822 6zwk:B (1.55) BS01 peptide N/A N/A N/A 34282773
    597823 6zwk:C (1.55) BS01 peptide N/A N/A N/A 34282773
    597824 6zwk:D (1.55) BS01 peptide N/A N/A N/A 34282773
    597825 6zwk:E (1.55) BS01 peptide N/A N/A N/A 34282773
    597826 6zwk:F (1.55) BS01 peptide N/A N/A N/A 34282773
    597827 6zwm:A (3.2) BS01 AGS 2.7.11.1 GO:0000139 ... P42345 33158864
    597828 6zwm:A (3.2) BS02 IHP 2.7.11.1 GO:0000139 ... P42345 33158864
    597829 6zwm:B (3.2) BS01 AGS 2.7.11.1 GO:0000139 ... P42345 33158864
    597830 6zwm:B (3.2) BS02 IHP 2.7.11.1 GO:0000139 ... P42345 33158864
    597831 6zwm:E (3.2) BS01 ZN ? GO:0001938 ... Q6R327 33158864
    597832 6zwm:E (3.2) BS02 AGS ? GO:0001938 ... Q6R327 33158864
    597833 6zwm:F (3.2) BS01 ZN ? GO:0001938 ... Q6R327 33158864
    597834 6zwm:F (3.2) BS02 AGS ? GO:0001938 ... Q6R327 33158864
    597835 6zwo:B (3.0) BS01 AGS 2.7.11.1 GO:0000139 ... P42345 33158864
    597836 6zwo:B (3.0) BS02 IHP 2.7.11.1 GO:0000139 ... P42345 33158864
    597837 6zwo:F (3.0) BS01 ZN ? GO:0001938 ... Q6R327 33158864
    597838 6zwo:F (3.0) BS02 AGS ? GO:0001938 ... Q6R327 33158864
    597839 6zwp:A (1.9) BS01 OE8 2.7.11.24 GO:0000077 ... Q16539 33035818 MOAD: ic50=22.1nM
    597840 6zwr:A (1.9) BS01 OEB 2.7.11.24 GO:0000077 ... P47811 33035818 MOAD: ic50=21.7nM
    597841 6zww:A (3.16) BS01 rna 3.6.4.13 GO:0003676 ... P43329 34290142
    597842 6zww:C (3.16) BS01 rna 3.6.4.13 GO:0003676 ... P43329 34290142
    597843 6zww:E (3.16) BS01 rna 3.6.4.13 GO:0003676 ... P43329 34290142
    597844 6zww:G (3.16) BS01 rna 3.6.4.13 GO:0003676 ... P43329 34290142
    597845 6zww:G (3.16) BS02 CA 3.6.4.13 GO:0003676 ... P43329 34290142
    597846 6zwy:A (1.0) BS01 U5P 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 N/A
    597847 6zx0:A (1.25) BS01 OMP 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 N/A
    597848 6zx0:A (1.25) BS02 U 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 N/A
    597849 6zx1:A (1.0) BS01 UP6 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 N/A
    597850 6zx1:A (1.0) BS02 PRO 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 N/A
    597851 6zx1:A (1.0) BS03 PRO 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 N/A
    597852 6zx2:A (1.2) BS01 QRT 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 N/A
    597853 6zx2:A (1.2) BS02 PRO 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 N/A
    597854 6zx3:A (1.15) BS01 QRZ 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 N/A
    597855 6zx3:A (1.15) BS02 PRO 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 N/A
    597856 6zx9:C (2.51973) BS01 ZN 3.2.1.17 GO:0003796 ... A4UDG5
    P00720
    34339457
    597857 6zxa:A (2.38) BS01 BCL ? N/A W0E6A1 33579696
    597858 6zxa:A (2.38) BS02 QS2 ? N/A W0E6A1 33579696
    597859 6zxa:A (2.38) BS03 BCL ? N/A W0E6A1 33579696
    597860 6zxa:A (2.38) BS04 BCL ? N/A W0E6A1 33579696
    597861 6zxa:A (2.38) BS05 QSE ? N/A W0E6A1 33579696
    597862 6zxa:A (2.38) BS06 QSE ? N/A W0E6A1 33579696
    597863 6zxa:A (2.38) BS07 QSE ? N/A W0E6A1 33579696
    597864 6zxa:B (2.38) BS01 BCL ? GO:0005886 ... W0E5B0 33579696
    597865 6zxa:B (2.38) BS02 BCL ? GO:0005886 ... W0E5B0 33579696
    597866 6zxa:B (2.38) BS03 BCL ? GO:0005886 ... W0E5B0 33579696
    597867 6zxa:B (2.38) BS04 QS2 ? GO:0005886 ... W0E5B0 33579696
    597868 6zxa:B (2.38) BS05 QSE ? GO:0005886 ... W0E5B0 33579696
    597869 6zxa:C (2.38) BS01 QS2 ? N/A W0E6A1 33579696
    597870 6zxa:C (2.38) BS02 QSE ? N/A W0E6A1 33579696
    597871 6zxa:C (2.38) BS03 BCL ? N/A W0E6A1 33579696
    597872 6zxa:C (2.38) BS04 BCL ? N/A W0E6A1 33579696
    597873 6zxa:C (2.38) BS05 BCL ? N/A W0E6A1 33579696
    597874 6zxa:C (2.38) BS06 QSE ? N/A W0E6A1 33579696
    597875 6zxa:C (2.38) BS07 QSE ? N/A W0E6A1 33579696
    597876 6zxa:D (2.38) BS01 BCL ? GO:0005886 ... W0E5B0 33579696
    597877 6zxa:D (2.38) BS02 BCL ? GO:0005886 ... W0E5B0 33579696
    597878 6zxa:D (2.38) BS03 BCL ? GO:0005886 ... W0E5B0 33579696
    597879 6zxa:D (2.38) BS04 QSE ? GO:0005886 ... W0E5B0 33579696
    597880 6zxa:D (2.38) BS05 QS2 ? GO:0005886 ... W0E5B0 33579696
    597881 6zxa:E (2.38) BS01 QSE ? N/A W0E6A1 33579696
    597882 6zxa:E (2.38) BS02 BCL ? N/A W0E6A1 33579696
    597883 6zxa:E (2.38) BS03 QS2 ? N/A W0E6A1 33579696
    597884 6zxa:E (2.38) BS04 QSE ? N/A W0E6A1 33579696
    597885 6zxa:E (2.38) BS05 BCL ? N/A W0E6A1 33579696
    597886 6zxa:E (2.38) BS06 BCL ? N/A W0E6A1 33579696
    597887 6zxa:E (2.38) BS07 QSE ? N/A W0E6A1 33579696
    597888 6zxa:F (2.38) BS01 BCL ? GO:0005886 ... W0E5B0 33579696
    597889 6zxa:F (2.38) BS02 QSE ? GO:0005886 ... W0E5B0 33579696
    597890 6zxa:F (2.38) BS03 BCL ? GO:0005886 ... W0E5B0 33579696
    597891 6zxa:F (2.38) BS04 BCL ? GO:0005886 ... W0E5B0 33579696
    597892 6zxa:F (2.38) BS05 QS2 ? GO:0005886 ... W0E5B0 33579696
    597893 6zxa:G (2.38) BS01 QSE ? N/A W0E6A1 33579696
    597894 6zxa:G (2.38) BS02 BCL ? N/A W0E6A1 33579696
    597895 6zxa:G (2.38) BS03 QS2 ? N/A W0E6A1 33579696
    597896 6zxa:G (2.38) BS04 QSE ? N/A W0E6A1 33579696
    597897 6zxa:G (2.38) BS05 BCL ? N/A W0E6A1 33579696
    597898 6zxa:G (2.38) BS06 BCL ? N/A W0E6A1 33579696
    597899 6zxa:G (2.38) BS07 QSE ? N/A W0E6A1 33579696
    597900 6zxa:H (2.38) BS01 BCL ? GO:0005886 ... W0E5B0 33579696
    597901 6zxa:H (2.38) BS02 QSE ? GO:0005886 ... W0E5B0 33579696
    597902 6zxa:H (2.38) BS03 BCL ? GO:0005886 ... W0E5B0 33579696
    597903 6zxa:H (2.38) BS04 BCL ? GO:0005886 ... W0E5B0 33579696
    597904 6zxa:H (2.38) BS05 QS2 ? GO:0005886 ... W0E5B0 33579696
    597905 6zxa:I (2.38) BS01 QSE ? N/A W0E6A1 33579696
    597906 6zxa:I (2.38) BS02 BCL ? N/A W0E6A1 33579696
    597907 6zxa:I (2.38) BS03 QS2 ? N/A W0E6A1 33579696
    597908 6zxa:I (2.38) BS04 QSE ? N/A W0E6A1 33579696
    597909 6zxa:I (2.38) BS05 BCL ? N/A W0E6A1 33579696
    597910 6zxa:I (2.38) BS06 BCL ? N/A W0E6A1 33579696
    597911 6zxa:I (2.38) BS07 QSE ? N/A W0E6A1 33579696
    597912 6zxa:J (2.38) BS01 BCL ? GO:0005886 ... W0E5B0 33579696
    597913 6zxa:J (2.38) BS02 QSE ? GO:0005886 ... W0E5B0 33579696
    597914 6zxa:J (2.38) BS03 BCL ? GO:0005886 ... W0E5B0 33579696
    597915 6zxa:J (2.38) BS04 BCL ? GO:0005886 ... W0E5B0 33579696
    597916 6zxa:J (2.38) BS05 QS2 ? GO:0005886 ... W0E5B0 33579696
    597917 6zxa:K (2.38) BS01 QSE ? N/A W0E6A1 33579696
    597918 6zxa:K (2.38) BS02 BCL ? N/A W0E6A1 33579696
    597919 6zxa:K (2.38) BS03 QS2 ? N/A W0E6A1 33579696
    597920 6zxa:K (2.38) BS04 BCL ? N/A W0E6A1 33579696
    597921 6zxa:K (2.38) BS05 BCL ? N/A W0E6A1 33579696
    597922 6zxa:K (2.38) BS06 QSE ? N/A W0E6A1 33579696
    597923 6zxa:K (2.38) BS07 QSE ? N/A W0E6A1 33579696
    597924 6zxa:L (2.38) BS01 BCL ? GO:0005886 ... W0E5B0 33579696
    597925 6zxa:L (2.38) BS02 BCL ? GO:0005886 ... W0E5B0 33579696
    597926 6zxa:L (2.38) BS03 BCL ? GO:0005886 ... W0E5B0 33579696
    597927 6zxa:L (2.38) BS04 QSE ? GO:0005886 ... W0E5B0 33579696
    597928 6zxa:L (2.38) BS05 QS2 ? GO:0005886 ... W0E5B0 33579696
    597929 6zxa:M (2.38) BS01 QSE ? N/A W0E6A1 33579696
    597930 6zxa:M (2.38) BS02 QSE ? N/A W0E6A1 33579696
    597931 6zxa:M (2.38) BS03 BCL ? N/A W0E6A1 33579696
    597932 6zxa:M (2.38) BS04 QS2 ? N/A W0E6A1 33579696
    597933 6zxa:M (2.38) BS05 QSE ? N/A W0E6A1 33579696
    597934 6zxa:M (2.38) BS06 BCL ? N/A W0E6A1 33579696
    597935 6zxa:M (2.38) BS07 BCL ? N/A W0E6A1 33579696
    597936 6zxa:N (2.38) BS01 QS2 ? GO:0005886 ... W0E5B0 33579696
    597937 6zxa:N (2.38) BS02 BCL ? GO:0005886 ... W0E5B0 33579696
    597938 6zxa:N (2.38) BS03 QSE ? GO:0005886 ... W0E5B0 33579696
    597939 6zxa:N (2.38) BS04 BCL ? GO:0005886 ... W0E5B0 33579696
    597940 6zxa:N (2.38) BS05 BCL ? GO:0005886 ... W0E5B0 33579696
    597941 6zxb:A (2.2) BS01 GH3 ? GO:0000160 ... B0SUI1 33846343
    597942 6zxb:A (2.2) BS02 MG ? GO:0000160 ... B0SUI1 33846343
    597943 6zxb:A (2.2) BS03 MG ? GO:0000160 ... B0SUI1 33846343
    597944 6zxb:A (2.2) BS04 MG ? GO:0000160 ... B0SUI1 33846343
    597945 6zxb:B (2.2) BS01 GH3 ? GO:0000160 ... B0SUI1 33846343
    597946 6zxb:B (2.2) BS02 GH3 ? GO:0000160 ... B0SUI1 33846343
    597947 6zxb:B (2.2) BS03 MG ? GO:0000160 ... B0SUI1 33846343
    597948 6zxb:B (2.2) BS04 MG ? GO:0000160 ... B0SUI1 33846343
    597949 6zxb:B (2.2) BS05 MG ? GO:0000160 ... B0SUI1 33846343
    597950 6zxc:A (2.8) BS01 MG ? GO:0000160 ... B0SUI1 33846343
    597951 6zxc:A (2.8) BS02 GH3 ? GO:0000160 ... B0SUI1 33846343
    597952 6zxc:A (2.8) BS03 MG ? GO:0000160 ... B0SUI1 33846343
    597953 6zxc:A (2.8) BS04 MG ? GO:0000160 ... B0SUI1 33846343
    597954 6zxc:B (2.8) BS01 MG ? GO:0000160 ... B0SUI1 33846343
    597955 6zxc:B (2.8) BS02 GH3 ? GO:0000160 ... B0SUI1 33846343
    597956 6zxc:B (2.8) BS03 MG ? GO:0000160 ... B0SUI1 33846343
    597957 6zxc:B (2.8) BS04 MG ? GO:0000160 ... B0SUI1 33846343
    597958 6zxc:C (2.8) BS01 MG ? GO:0000160 ... B0SUI1 33846343
    597959 6zxc:C (2.8) BS02 GH3 ? GO:0000160 ... B0SUI1 33846343
    597960 6zxc:C (2.8) BS03 MG ? GO:0000160 ... B0SUI1 33846343
    597961 6zxc:C (2.8) BS04 MG ? GO:0000160 ... B0SUI1 33846343
    597962 6zxc:D (2.8) BS01 MG ? GO:0000160 ... B0SUI1 33846343
    597963 6zxc:D (2.8) BS02 GH3 ? GO:0000160 ... B0SUI1 33846343
    597964 6zxc:D (2.8) BS03 MG ? GO:0000160 ... B0SUI1 33846343
    597965 6zxc:D (2.8) BS04 MG ? GO:0000160 ... B0SUI1 33846343
    597966 6zxd:A (3.2) BS01 rna ? GO:0000028 ... P08865 33208940
    597967 6zxd:B (3.2) BS01 rna ? GO:0002181 ... P61247 33208940
    597968 6zxd:C (3.2) BS01 rna ? GO:0002181 ... P15880 33208940
    597969 6zxd:D (3.2) BS01 rna 4.2.99.18 GO:0000977 ... P23396 33208940
    597970 6zxd:E (3.2) BS01 rna ? GO:0002181 ... P62701 33208940
    597971 6zxd:F (3.2) BS01 rna ? GO:0000028 ... P46782 33208940
    597972 6zxd:G (3.2) BS01 rna ? GO:0000082 ... P62753 33208940
    597973 6zxd:H (3.2) BS01 rna ? GO:0001843 ... P62081 33208940
    597974 6zxd:I (3.2) BS01 rna ? GO:0000462 ... P62241 33208940
    597975 6zxd:J (3.2) BS01 rna ? GO:0002181 ... P46781 33208940
    597976 6zxd:K (3.2) BS01 rna ? GO:0002181 ... P46783 33208940
    597977 6zxd:L (3.2) BS01 rna ? GO:0002181 ... P62280 33208940
    597978 6zxd:M (3.2) BS01 rna ? GO:0002181 ... P25398 33208940
    597979 6zxd:N (3.2) BS01 rna ? GO:0002181 ... P62277 33208940
    597980 6zxd:O (3.2) BS01 rna ? GO:0000028 ... P62263 33208940
    597981 6zxd:P (3.2) BS01 rna ? GO:0000028 ... P62841 33208940
    597982 6zxd:Q (3.2) BS01 rna ? GO:0000462 ... P62249 33208940
    597983 6zxd:R (3.2) BS01 rna ? GO:0002181 ... P08708 33208940
    597984 6zxd:S (3.2) BS01 rna ? GO:0002181 ... P62269 33208940
    597985 6zxd:T (3.2) BS01 rna ? GO:0000028 ... P39019 33208940
    597986 6zxd:U (3.2) BS01 rna ? GO:0002181 ... P60866 33208940
    597987 6zxd:W (3.2) BS01 rna ? GO:0002181 ... P62244 33208940
    597988 6zxd:X (3.2) BS01 rna ? GO:0002181 ... P62266 33208940
    597989 6zxd:Y (3.2) BS01 rna ? GO:0002181 ... P62847 33208940
    597990 6zxd:Z (3.2) BS01 rna ? GO:0002181 ... P62851 33208940
    597991 6zxd:b (3.2) BS01 rna ? GO:0000028 ... P42677 33208940
    597992 6zxd:c (3.2) BS01 rna ? GO:0000028 ... P62857 33208940
    597993 6zxd:d (3.2) BS01 rna ? GO:0002181 ... P62273 33208940
    597994 6zxd:e (3.2) BS01 rna ? GO:0003735 ... P62861 33208940
    597995 6zxd:f (3.2) BS01 rna ? GO:0002181 ... P62979 33208940
    597996 6zxd:g (3.2) BS01 rna ? GO:0001891 ... P63244 33208940
    597997 6zxd:k (3.2) BS01 rna ? GO:0003723 ... Q8N1G4 33208940
    597998 6zxd:x (3.2) BS01 rna ? GO:0003676 ... Q9NRX1 33208940
    597999 6zxd:y (3.2) BS01 rna 3.1.-.- GO:0004519 ... Q9ULX3 33208940
    598000 6zxd:y (3.2) BS02 ZN 3.1.-.- GO:0004519 ... Q9ULX3 33208940

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).