SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    598401 6zxs:J (3.0) BS04 CLA ? GO:0009507 ... D5MAL3 N/A
    598402 6zxs:J (3.0) BS05 CLA ? GO:0009507 ... D5MAL3 N/A
    598403 6zxs:K (3.0) BS01 CLA ? GO:0009507 ... E1C9L3 N/A
    598404 6zxs:K (3.0) BS02 CLA ? GO:0009507 ... E1C9L3 N/A
    598405 6zxs:K (3.0) BS03 CLA ? GO:0009507 ... E1C9L3 N/A
    598406 6zxs:K (3.0) BS04 CLA ? GO:0009507 ... E1C9L3 N/A
    598407 6zxs:K (3.0) BS05 CLA ? GO:0009507 ... E1C9L3 N/A
    598408 6zxs:K (3.0) BS06 CLA ? GO:0009507 ... E1C9L3 N/A
    598409 6zxs:L (3.0) BS01 CLA ? GO:0009522 ... E1C9L1 N/A
    598410 6zxs:L (3.0) BS02 CLA ? GO:0009522 ... E1C9L1 N/A
    598411 6zxs:L (3.0) BS03 CLA ? GO:0009522 ... E1C9L1 N/A
    598412 6zxs:L (3.0) BS04 CLA ? GO:0009522 ... E1C9L1 N/A
    598413 6zxs:L (3.0) BS05 CLA ? GO:0009522 ... E1C9L1 N/A
    598414 6zxs:L (3.0) BS06 CLA ? GO:0009522 ... E1C9L1 N/A
    598415 6zxs:L (3.0) BS07 CLA ? GO:0009522 ... E1C9L1 N/A
    598416 6zxu:A (1.73) BS01 SF4 ? GO:0046872 ... K2MB66 32887524
    598417 6zxu:A (1.73) BS02 SF4 ? GO:0046872 ... K2MB66 32887524
    598418 6zxu:A (1.73) BS03 B12 ? GO:0046872 ... K2MB66 32887524
    598419 6zxu:B (1.73) BS01 SF4 ? GO:0046872 ... K2MB66 32887524
    598420 6zxu:B (1.73) BS02 SF4 ? GO:0046872 ... K2MB66 32887524
    598421 6zxu:B (1.73) BS03 B12 ? GO:0046872 ... K2MB66 32887524
    598422 6zxu:C (1.73) BS01 SF4 ? GO:0046872 ... K2MB66 32887524
    598423 6zxu:C (1.73) BS02 SF4 ? GO:0046872 ... K2MB66 32887524
    598424 6zxu:C (1.73) BS03 B12 ? GO:0046872 ... K2MB66 32887524
    598425 6zxv:A (1.88) BS01 SFG 2.1.1.213 GO:0000049 ... O29011 N/A
    598426 6zxv:B (1.88) BS01 SFG 2.1.1.213 GO:0000049 ... O29011 N/A
    598427 6zxw:G (2.19) BS01 SFG 2.1.1.213 GO:0000049 ... O29011 N/A
    598428 6zxw:H (2.19) BS01 ZN ? GO:0046872 ... A0A117KMN5 N/A
    598429 6zxx:A (1.99) BS01 SF4 ? GO:0046872 ... K2MB66 32887524
    598430 6zxx:A (1.99) BS02 SF4 ? GO:0046872 ... K2MB66 32887524
    598431 6zxx:A (1.99) BS03 B12 ? GO:0046872 ... K2MB66 32887524
    598432 6zxx:A (1.99) BS04 QSH ? GO:0046872 ... K2MB66 32887524
    598433 6zxx:A (1.99) BS05 QSB ? GO:0046872 ... K2MB66 32887524
    598434 6zxx:B (1.99) BS01 SF4 ? GO:0046872 ... K2MB66 32887524
    598435 6zxx:B (1.99) BS02 SF4 ? GO:0046872 ... K2MB66 32887524
    598436 6zxx:B (1.99) BS03 B12 ? GO:0046872 ... K2MB66 32887524
    598437 6zxx:B (1.99) BS04 QSH ? GO:0046872 ... K2MB66 32887524
    598438 6zxx:B (1.99) BS05 QSB ? GO:0046872 ... K2MB66 32887524
    598439 6zxx:C (1.99) BS01 SF4 ? GO:0046872 ... K2MB66 32887524
    598440 6zxx:C (1.99) BS02 SF4 ? GO:0046872 ... K2MB66 32887524
    598441 6zxx:C (1.99) BS03 B12 ? GO:0046872 ... K2MB66 32887524
    598442 6zxx:C (1.99) BS04 QSH ? GO:0046872 ... K2MB66 32887524
    598443 6zxx:C (1.99) BS05 QSB ? GO:0046872 ... K2MB66 32887524
    598444 6zy0:A (2.13) BS01 SF4 ? GO:0046872 ... K2MB66 32887524
    598445 6zy0:A (2.13) BS02 SF4 ? GO:0046872 ... K2MB66 32887524
    598446 6zy0:A (2.13) BS03 B12 ? GO:0046872 ... K2MB66 32887524
    598447 6zy0:B (2.13) BS01 SF4 ? GO:0046872 ... K2MB66 32887524
    598448 6zy0:B (2.13) BS02 SF4 ? GO:0046872 ... K2MB66 32887524
    598449 6zy0:B (2.13) BS03 B12 ? GO:0046872 ... K2MB66 32887524
    598450 6zy0:C (2.13) BS01 SF4 ? GO:0046872 ... K2MB66 32887524
    598451 6zy0:C (2.13) BS02 SF4 ? GO:0046872 ... K2MB66 32887524
    598452 6zy0:C (2.13) BS03 B12 ? GO:0046872 ... K2MB66 32887524
    598453 6zy1:A (1.99) BS01 SF4 ? GO:0046872 ... K2MB66 32887524
    598454 6zy1:A (1.99) BS02 SF4 ? GO:0046872 ... K2MB66 32887524
    598455 6zy1:A (1.99) BS03 B12 ? GO:0046872 ... K2MB66 32887524
    598456 6zy1:A (1.99) BS04 QSB ? GO:0046872 ... K2MB66 32887524
    598457 6zy1:B (1.99) BS01 SF4 ? GO:0046872 ... K2MB66 32887524
    598458 6zy1:B (1.99) BS02 SF4 ? GO:0046872 ... K2MB66 32887524
    598459 6zy1:B (1.99) BS03 B12 ? GO:0046872 ... K2MB66 32887524
    598460 6zy1:B (1.99) BS04 QSB ? GO:0046872 ... K2MB66 32887524
    598461 6zy1:C (1.99) BS01 SF4 ? GO:0046872 ... K2MB66 32887524
    598462 6zy1:C (1.99) BS02 SF4 ? GO:0046872 ... K2MB66 32887524
    598463 6zy1:C (1.99) BS03 B12 ? GO:0046872 ... K2MB66 32887524
    598464 6zy1:C (1.99) BS04 QSB ? GO:0046872 ... K2MB66 32887524
    598465 6zy4:F (4.1) BS01 ADP N/A GO:0005524 ... N/A 33199922
    598466 6zy4:G (4.1) BS01 ADP N/A GO:0005524 ... N/A 33199922
    598467 6zy5:A (3.6) BS01 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598468 6zy5:A (3.6) BS02 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598469 6zy5:A (3.6) BS03 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598470 6zy5:A (3.6) BS04 EVP 5.6.2.2 GO:0000228 ... P11388 34016969 BindingDB: EC50=810nM, IC50=56000nM
    598471 6zy5:B (3.6) BS01 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598472 6zy5:B (3.6) BS02 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598473 6zy5:B (3.6) BS03 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598474 6zy5:B (3.6) BS04 EVP 5.6.2.2 GO:0000228 ... P11388 34016969 BindingDB: EC50=810nM, IC50=56000nM
    598475 6zy6:A (4.1) BS01 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598476 6zy6:A (4.1) BS02 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598477 6zy6:A (4.1) BS03 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598478 6zy6:A (4.1) BS04 EVP 5.6.2.2 GO:0000228 ... P11388 34016969 BindingDB: EC50=810nM, IC50=56000nM
    598479 6zy6:B (4.1) BS01 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598480 6zy6:B (4.1) BS02 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598481 6zy6:B (4.1) BS03 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598482 6zy6:B (4.1) BS04 EVP 5.6.2.2 GO:0000228 ... P11388 34016969 BindingDB: EC50=810nM, IC50=56000nM
    598483 6zy7:A (4.64) BS01 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598484 6zy7:A (4.64) BS02 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598485 6zy7:A (4.64) BS03 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598486 6zy7:A (4.64) BS04 EVP 5.6.2.2 GO:0000228 ... P11388 34016969 BindingDB: EC50=810nM, IC50=56000nM
    598487 6zy7:A (4.64) BS05 ANP 5.6.2.2 GO:0000228 ... P11388 34016969
    598488 6zy7:B (4.64) BS01 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598489 6zy7:B (4.64) BS02 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598490 6zy7:B (4.64) BS03 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598491 6zy7:B (4.64) BS04 ANP 5.6.2.2 GO:0000228 ... P11388 34016969
    598492 6zy7:B (4.64) BS05 EVP 5.6.2.2 GO:0000228 ... P11388 34016969 BindingDB: EC50=810nM, IC50=56000nM
    598493 6zy8:A (7.4) BS01 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598494 6zy8:A (7.4) BS02 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598495 6zy8:A (7.4) BS03 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598496 6zy8:A (7.4) BS04 ANP 5.6.2.2 GO:0000228 ... P11388 34016969
    598497 6zy8:A (7.4) BS05 EVP 5.6.2.2 GO:0000228 ... P11388 34016969 BindingDB: EC50=810nM, IC50=56000nM
    598498 6zy8:B (7.4) BS01 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598499 6zy8:B (7.4) BS02 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598500 6zy8:B (7.4) BS03 dna 5.6.2.2 GO:0000228 ... P11388 34016969
    598501 6zy8:B (7.4) BS04 ANP 5.6.2.2 GO:0000228 ... P11388 34016969
    598502 6zy8:B (7.4) BS05 EVP 5.6.2.2 GO:0000228 ... P11388 34016969 BindingDB: EC50=810nM, IC50=56000nM
    598503 6zy9:F (3.3) BS01 ANP N/A GO:0005524 ... N/A 33199922
    598504 6zy9:G (3.3) BS01 ANP N/A GO:0005524 ... N/A 33199922
    598505 6zyf:A (2.19) BS01 K4Q 3.1.1.98 GO:0016787 ... Q6P988 33647468
    598506 6zyf:B (2.19) BS01 K4Q 3.1.1.98 GO:0016787 ... Q6P988 33647468
    598507 6zyh:A (1.88) BS01 ADP 3.6.4.10 GO:0005524 ... G3I8R9 33295873
    598508 6zyh:A (1.88) BS02 CA 3.6.4.10 GO:0005524 ... G3I8R9 33295873
    598509 6zyh:B (1.88) BS01 ADP 3.6.4.10 GO:0005524 ... G3I8R9 33295873
    598510 6zyh:B (1.88) BS02 CA 3.6.4.10 GO:0005524 ... G3I8R9 33295873
    598511 6zyi:A (1.52) BS01 ADP ? GO:0005524 ... P0DMV8 33295873
    598512 6zyi:A (1.52) BS02 CA ? GO:0005524 ... P0DMV8 33295873
    598513 6zyj:A (1.85) BS01 CA 3.6.4.10 GO:0005524 ... P11142 33295873
    598514 6zyj:A (1.85) BS02 ADP 3.6.4.10 GO:0005524 ... P11142 33295873
    598515 6zyj:B (1.85) BS01 ADP 3.6.4.10 GO:0005524 ... P11142 33295873
    598516 6zyj:B (1.85) BS02 CA 3.6.4.10 GO:0005524 ... P11142 33295873
    598517 6zym:A (3.4) BS01 rna ? GO:0000398 ... Q6P2Q9 33007253
    598518 6zym:A (3.4) BS02 rna ? GO:0000398 ... Q6P2Q9 33007253
    598519 6zym:A (3.4) BS03 rna ? GO:0000398 ... Q6P2Q9 33007253
    598520 6zym:A (3.4) BS04 rna ? GO:0000398 ... Q6P2Q9 33007253
    598521 6zym:A (3.4) BS05 rna ? GO:0000398 ... Q6P2Q9 33007253
    598522 6zym:A (3.4) BS06 peptide ? GO:0000398 ... Q6P2Q9 33007253
    598523 6zym:A (3.4) BS07 IHP ? GO:0000398 ... Q6P2Q9 33007253
    598524 6zym:B (3.4) BS01 GTP ? GO:0000398 ... Q15029 33007253
    598525 6zym:C (3.4) BS01 rna ? GO:0000122 ... Q13573 33007253
    598526 6zym:D (3.4) BS01 rna ? GO:0000398 ... O43660 33007253
    598527 6zym:E (3.4) BS01 rna ? GO:0000398 ... O60508 33007253
    598528 6zym:L (3.4) BS01 rna ? GO:0000077 ... Q99459 33007253
    598529 6zym:O (3.4) BS01 rna ? GO:0000245 ... Q9BZJ0 33007253
    598530 6zym:P (3.4) BS01 rna ? GO:0003723 ... Q9NW64 33007253
    598531 6zym:P (3.4) BS02 rna ? GO:0003723 ... Q9NW64 33007253
    598532 6zym:P (3.4) BS03 ZN ? GO:0003723 ... Q9NW64 33007253
    598533 6zym:P (3.4) BS04 ZN ? GO:0003723 ... Q9NW64 33007253
    598534 6zym:P (3.4) BS05 ZN ? GO:0003723 ... Q9NW64 33007253
    598535 6zym:Q (3.4) BS01 rna ? GO:0000398 ... P41223 33007253
    598536 6zym:Q (3.4) BS02 ZN ? GO:0000398 ... P41223 33007253
    598537 6zym:Q (3.4) BS03 ZN ? GO:0000398 ... P41223 33007253
    598538 6zym:Q (3.4) BS04 ZN ? GO:0000398 ... P41223 33007253
    598539 6zym:R (3.4) BS01 rna ? GO:0000398 ... Q9P013 33007253
    598540 6zym:R (3.4) BS02 rna ? GO:0000398 ... Q9P013 33007253
    598541 6zym:S (3.4) BS01 rna ? GO:0000398 ... Q9UQ35 33007253
    598542 6zym:t (3.4) BS01 rna ? GO:0000398 ... Q9NXE8 33007253
    598543 6zym:t (3.4) BS02 rna ? GO:0000398 ... Q9NXE8 33007253
    598544 6zym:u (3.4) BS01 rna ? GO:0000398 ... Q9BW85 33007253
    598545 6zym:u (3.4) BS02 rna ? GO:0000398 ... Q9BW85 33007253
    598546 6zym:u (3.4) BS03 rna ? GO:0000398 ... Q9BW85 33007253
    598547 6zym:u (3.4) BS04 rna ? GO:0000398 ... Q9BW85 33007253
    598548 6zym:u (3.4) BS05 peptide ? GO:0000398 ... Q9BW85 33007253
    598549 6zym:u (3.4) BS06 ZN ? GO:0000398 ... Q9BW85 33007253
    598550 6zyn:A (1.40001) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34164056
    598551 6zyn:A (1.40001) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34164056
    598552 6zyn:A (1.40001) BS03 QT2 3.5.2.6 GO:0016787 ... Q9K2N0 34164056
    598553 6zyn:B (1.40001) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34164056
    598554 6zyn:B (1.40001) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34164056
    598555 6zyn:B (1.40001) BS03 QT2 3.5.2.6 GO:0016787 ... Q9K2N0 34164056
    598556 6zyo:A (1.45) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34164056
    598557 6zyo:A (1.45) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34164056
    598558 6zyo:A (1.45) BS03 QST 3.5.2.6 GO:0016787 ... Q9K2N0 34164056
    598559 6zyo:B (1.45) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34164056
    598560 6zyo:B (1.45) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34164056
    598561 6zyo:B (1.45) BS03 QST 3.5.2.6 GO:0016787 ... Q9K2N0 34164056
    598562 6zyp:A (1.4) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 34164056
    598563 6zyp:A (1.4) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 34164056
    598564 6zyp:A (1.4) BS03 QT2 3.5.2.6 GO:0008270 ... C7C422 34164056
    598565 6zyp:B (1.4) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 34164056
    598566 6zyp:B (1.4) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 34164056
    598567 6zyq:A (1.7) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 34164056
    598568 6zyq:A (1.7) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 34164056
    598569 6zyq:A (1.7) BS03 QST 3.5.2.6 GO:0008270 ... C7C422 34164056
    598570 6zyq:B (1.7) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 34164056
    598571 6zyq:B (1.7) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 34164056
    598572 6zyq:B (1.7) BS03 QST 3.5.2.6 GO:0008270 ... C7C422 34164056
    598573 6zyr:A (1.87) BS01 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598574 6zyr:A (1.87) BS02 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598575 6zyr:A (1.87) BS03 QT2 3.5.2.6 GO:0008270 ... P52699 34164056
    598576 6zyr:B (1.87) BS01 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598577 6zyr:B (1.87) BS02 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598578 6zyr:B (1.87) BS03 QT2 3.5.2.6 GO:0008270 ... P52699 34164056
    598579 6zyr:C (1.87) BS01 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598580 6zyr:C (1.87) BS02 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598581 6zyr:C (1.87) BS03 QT2 3.5.2.6 GO:0008270 ... P52699 34164056
    598582 6zyr:D (1.87) BS01 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598583 6zyr:D (1.87) BS02 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598584 6zyr:D (1.87) BS03 QT2 3.5.2.6 GO:0008270 ... P52699 34164056
    598585 6zys:A (1.87001) BS01 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598586 6zys:A (1.87001) BS02 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598587 6zys:A (1.87001) BS03 QST 3.5.2.6 GO:0008270 ... P52699 34164056
    598588 6zys:B (1.87001) BS01 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598589 6zys:B (1.87001) BS02 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598590 6zys:B (1.87001) BS03 QST 3.5.2.6 GO:0008270 ... P52699 34164056
    598591 6zys:C (1.87001) BS01 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598592 6zys:C (1.87001) BS02 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598593 6zys:C (1.87001) BS03 QST 3.5.2.6 GO:0008270 ... P52699 34164056
    598594 6zys:D (1.87001) BS01 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598595 6zys:D (1.87001) BS02 ZN 3.5.2.6 GO:0008270 ... P52699 34164056
    598596 6zys:D (1.87001) BS03 QST 3.5.2.6 GO:0008270 ... P52699 34164056
    598597 6zyt:AAA (1.8) BS01 UJE N/A GO:0009374 ... N/A 34825690
    598598 6zyt:BBB (1.8) BS01 UJE N/A GO:0009374 ... N/A 34825690
    598599 6zyt:CCC (1.8) BS01 UJE N/A GO:0009374 ... N/A 34825690
    598600 6zyt:DDD (1.8) BS01 UJE N/A GO:0009374 ... N/A 34825690

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).