SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    598601 6zyt:EEE (1.8) BS01 UJE N/A GO:0009374 ... N/A 34825690
    598602 6zyt:FFF (1.8) BS01 UJE N/A GO:0009374 ... N/A 34825690
    598603 6zyu:A (1.9) BS01 GLU ? GO:0015276 ... P19491 34242002
    598604 6zyu:A (1.9) BS02 QSZ ? GO:0015276 ... P19491 34242002
    598605 6zyu:A (1.9) BS03 QSW ? GO:0015276 ... P19491 34242002
    598606 6zyu:B (1.9) BS01 ZN ? GO:0015276 ... P19491 34242002
    598607 6zyu:B (1.9) BS02 GLU ? GO:0015276 ... P19491 34242002
    598608 6zyu:B (1.9) BS03 QSZ ? GO:0015276 ... P19491 34242002
    598609 6zyu:B (1.9) BS04 QSW ? GO:0015276 ... P19491 34242002
    598610 6zyu:B (1.9) BS05 QSZ ? GO:0015276 ... P19491 34242002
    598611 6zyu:B (1.9) BS06 QSW ? GO:0015276 ... P19491 34242002
    598612 6zyu:C (1.9) BS01 QSZ ? GO:0015276 ... P19491 34242002
    598613 6zyu:C (1.9) BS02 QSW ? GO:0015276 ... P19491 34242002
    598614 6zyu:C (1.9) BS03 ZN ? GO:0015276 ... P19491 34242002
    598615 6zyu:C (1.9) BS04 ZN ? GO:0015276 ... P19491 34242002
    598616 6zyu:C (1.9) BS05 GLU ? GO:0015276 ... P19491 34242002
    598617 6zyu:C (1.9) BS06 QSZ ? GO:0015276 ... P19491 34242002
    598618 6zyu:C (1.9) BS07 QSW ? GO:0015276 ... P19491 34242002
    598619 6zyw:C (8.78) BS01 ADP ? GO:0005524 ... Q22A67 33632841
    598620 6zyw:C (8.78) BS02 ATP ? GO:0005524 ... Q22A67 33632841
    598621 6zyw:C (8.78) BS03 ADP ? GO:0005524 ... Q22A67 33632841
    598622 6zyw:C (8.78) BS04 ADP ? GO:0005524 ... Q22A67 33632841
    598623 6zyw:Y (8.78) BS01 GTP ? N/A Q22YU3 33632841
    598624 6zyx:Y (4.3) BS01 GTP ? N/A Q22YU3 33632841
    598625 6zyy:C (4.4) BS01 ADP ? GO:0005524 ... Q22A67 33632841
    598626 6zyy:C (4.4) BS02 ATP ? GO:0005524 ... Q22A67 33632841
    598627 6zyy:C (4.4) BS03 ADP ? GO:0005524 ... Q22A67 33632841
    598628 6zyy:C (4.4) BS04 ADP ? GO:0005524 ... Q22A67 33632841
    598629 6zyz:A (2.27) BS01 PXN N/A GO:0016491 ... N/A 34262629
    598630 6zyz:A (2.27) BS02 NAD N/A GO:0016491 ... N/A 34262629
    598631 6zyz:B (2.27) BS01 NAD N/A GO:0016491 ... N/A 34262629
    598632 6zyz:C (2.27) BS01 NAD N/A GO:0016491 ... N/A 34262629
    598633 6zyz:D (2.27) BS01 NAD N/A GO:0016491 ... N/A 34262629
    598634 6zz1:A (1.64) BS01 QOK ? GO:0007166 ... Q8NB16 33318170
    598635 6zz1:B (1.64) BS01 QOK ? GO:0007166 ... Q8NB16 33318170
    598636 6zz2:A (1.14885) BS01 F63 3.4.23.22 GO:0004190 ... P11838 N/A
    598637 6zz3:A (2.095) BS01 GLC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    598638 6zz3:A (2.095) BS02 BGC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    598639 6zz3:A (2.095) BS03 BGC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    598640 6zz3:B (2.095) BS01 GLC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    598641 6zz3:B (2.095) BS02 BGC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    598642 6zz3:B (2.095) BS03 BGC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    598643 6zz3:C (2.095) BS01 GLC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    598644 6zz3:C (2.095) BS02 BGC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    598645 6zz3:C (2.095) BS03 BGC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    598646 6zz3:D (2.095) BS01 GLC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    598647 6zz3:D (2.095) BS02 BGC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    598648 6zz3:D (2.095) BS03 BGC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    598649 6zz6:A (3.4) BS01 dna ? GO:0005524 ... P32908 32930661
    598650 6zz6:A (3.4) BS02 ATP ? GO:0005524 ... P32908 32930661
    598651 6zz6:A (3.4) BS03 MG ? GO:0005524 ... P32908 32930661
    598652 6zz6:A (3.4) BS04 ATP ? GO:0005524 ... P32908 32930661
    598653 6zz6:B (3.4) BS01 dna ? GO:0005524 ... P47037 32930661
    598654 6zz6:B (3.4) BS02 ATP ? GO:0005524 ... P47037 32930661
    598655 6zz6:B (3.4) BS03 ATP ? GO:0005524 ... P47037 32930661
    598656 6zz6:B (3.4) BS04 MG ? GO:0005524 ... P47037 32930661
    598657 6zz6:D (3.4) BS01 dna ? GO:0000775 ... Q04002 32930661
    598658 6zz6:D (3.4) BS02 dna ? GO:0000775 ... Q04002 32930661
    598659 6zza:A (2.491) BS01 2BA ? N/A A0A076YWK5 N/A
    598660 6zzj:A (1.35) BS01 CAO 2.3.1.12 GO:0016746 ... Q8NNJ2 34819376
    598661 6zzk:A (2.09) BS01 COA 2.3.1.12 GO:0016746 ... Q8NNJ2 34819376
    598662 6zzk:A (2.09) BS02 LPM 2.3.1.12 GO:0016746 ... Q8NNJ2 34819376
    598663 6zzk:B (2.09) BS01 COA 2.3.1.12 GO:0016746 ... Q8NNJ2 34819376
    598664 6zzm:A (2.5) BS01 COA 2.3.1.- GO:0016746 ... A0A0G3H170 34819376
    598665 6zzm:B (2.5) BS01 COA 2.3.1.- GO:0016746 ... A0A0G3H170 34819376
    598666 6zzo:A (1.28) BS01 NAD 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598667 6zzo:A (1.28) BS02 AAE 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598668 6zzo:B (1.28) BS01 NAD 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598669 6zzo:B (1.28) BS02 AAE 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598670 6zzo:C (1.28) BS01 NAD 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598671 6zzo:C (1.28) BS02 AAE 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598672 6zzo:D (1.28) BS01 NAD 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598673 6zzo:D (1.28) BS02 AAE 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598674 6zzp:A (1.84) BS01 NAD 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598675 6zzp:A (1.84) BS02 QT8 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598676 6zzp:B (1.84) BS01 NAD 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598677 6zzp:B (1.84) BS02 QT8 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598678 6zzp:C (1.84) BS01 NAD 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598679 6zzp:C (1.84) BS02 QT8 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598680 6zzp:D (1.84) BS01 NAD 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598681 6zzp:D (1.84) BS02 QT8 1.1.1.30 GO:0000166 ... Q4FRT2 33391858
    598682 6zzq:A (1.93) BS01 NAD ? GO:0000166 ... A0A1E3M3N6 33391858
    598683 6zzq:A (1.93) BS02 AAE ? GO:0000166 ... A0A1E3M3N6 33391858
    598684 6zzs:A (1.85) BS01 NAD ? GO:0000166 ... A0A1E3M3N6 33391858
    598685 6zzs:A (1.85) BS02 QT8 ? GO:0000166 ... A0A1E3M3N6 33391858
    598686 6zzs:B (1.85) BS01 NAD ? GO:0000166 ... A0A1E3M3N6 33391858
    598687 6zzs:B (1.85) BS02 QT8 ? GO:0000166 ... A0A1E3M3N6 33391858
    598688 6zzs:C (1.85) BS01 NAD ? GO:0000166 ... A0A1E3M3N6 33391858
    598689 6zzs:C (1.85) BS02 QT8 ? GO:0000166 ... A0A1E3M3N6 33391858
    598690 6zzs:C (1.85) BS03 QT8 ? GO:0000166 ... A0A1E3M3N6 33391858
    598691 6zzs:D (1.85) BS01 NAD ? GO:0000166 ... A0A1E3M3N6 33391858
    598692 6zzs:D (1.85) BS02 QT8 ? GO:0000166 ... A0A1E3M3N6 33391858
    598693 6zzs:E (1.85) BS01 NAD ? GO:0000166 ... A0A1E3M3N6 33391858
    598694 6zzs:F (1.85) BS01 NAD ? GO:0000166 ... A0A1E3M3N6 33391858
    598695 6zzs:F (1.85) BS02 QT8 ? GO:0000166 ... A0A1E3M3N6 33391858
    598696 6zzt:C (2.6) BS01 NAD N/A GO:0016491 ... N/A 34262629
    598697 6zzu:A (3.5) BS01 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    598698 6zzu:B (3.5) BS01 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    598699 6zzu:C (3.5) BS01 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    598700 6zzu:D (3.5) BS01 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    598701 6zzw:A (1.9) BS01 FUC ? N/A B4EH86 33769626
    598702 6zzw:A (1.9) BS02 FUC ? N/A B4EH86 33769626
    598703 6zzw:A (1.9) BS03 QT5 ? N/A B4EH86 33769626
    598704 6zzw:A (1.9) BS04 QT5 ? N/A B4EH86 33769626
    598705 6zzw:B (1.9) BS01 FUC ? N/A B4EH86 33769626
    598706 6zzw:B (1.9) BS02 FUC ? N/A B4EH86 33769626
    598707 6zzw:B (1.9) BS03 QT5 ? N/A B4EH86 33769626
    598708 6zzw:B (1.9) BS04 QT5 ? N/A B4EH86 33769626
    598709 6zzw:C (1.9) BS01 FUC ? N/A B4EH86 33769626
    598710 6zzw:C (1.9) BS02 FUC ? N/A B4EH86 33769626
    598711 6zzw:C (1.9) BS03 QT5 ? N/A B4EH86 33769626
    598712 6zzw:C (1.9) BS04 QT5 ? N/A B4EH86 33769626
    598713 6zzx:1 (2.7) BS01 AXT ? GO:0009765 ... A0A2P6TT36 34462576
    598714 6zzx:1 (2.7) BS02 CLA ? GO:0009765 ... A0A2P6TT36 34462576
    598715 6zzx:1 (2.7) BS03 CLA ? GO:0009765 ... A0A2P6TT36 34462576
    598716 6zzx:1 (2.7) BS04 CLA ? GO:0009765 ... A0A2P6TT36 34462576
    598717 6zzx:1 (2.7) BS05 CHL ? GO:0009765 ... A0A2P6TT36 34462576
    598718 6zzx:1 (2.7) BS06 CLA ? GO:0009765 ... A0A2P6TT36 34462576
    598719 6zzx:1 (2.7) BS07 CLA ? GO:0009765 ... A0A2P6TT36 34462576
    598720 6zzx:1 (2.7) BS08 CLA ? GO:0009765 ... A0A2P6TT36 34462576
    598721 6zzx:1 (2.7) BS09 CLA ? GO:0009765 ... A0A2P6TT36 34462576
    598722 6zzx:1 (2.7) BS10 CHL ? GO:0009765 ... A0A2P6TT36 34462576
    598723 6zzx:1 (2.7) BS11 CHL ? GO:0009765 ... A0A2P6TT36 34462576
    598724 6zzx:1 (2.7) BS12 CLA ? GO:0009765 ... A0A2P6TT36 34462576
    598725 6zzx:1 (2.7) BS13 CHL ? GO:0009765 ... A0A2P6TT36 34462576
    598726 6zzx:1 (2.7) BS14 CLA ? GO:0009765 ... A0A2P6TT36 34462576
    598727 6zzx:1 (2.7) BS15 CHL ? GO:0009765 ... A0A2P6TT36 34462576
    598728 6zzx:2 (2.7) BS01 CLA ? GO:0009765 ... A0A2P6TMX4 34462576
    598729 6zzx:2 (2.7) BS02 CLA ? GO:0009765 ... A0A2P6TMX4 34462576
    598730 6zzx:2 (2.7) BS03 CLA ? GO:0009765 ... A0A2P6TMX4 34462576
    598731 6zzx:2 (2.7) BS04 CLA ? GO:0009765 ... A0A2P6TMX4 34462576
    598732 6zzx:2 (2.7) BS05 CLA ? GO:0009765 ... A0A2P6TMX4 34462576
    598733 6zzx:2 (2.7) BS06 CLA ? GO:0009765 ... A0A2P6TMX4 34462576
    598734 6zzx:2 (2.7) BS07 CLA ? GO:0009765 ... A0A2P6TMX4 34462576
    598735 6zzx:2 (2.7) BS08 CLA ? GO:0009765 ... A0A2P6TMX4 34462576
    598736 6zzx:2 (2.7) BS09 CHL ? GO:0009765 ... A0A2P6TMX4 34462576
    598737 6zzx:2 (2.7) BS10 CHL ? GO:0009765 ... A0A2P6TMX4 34462576
    598738 6zzx:2 (2.7) BS11 CLA ? GO:0009765 ... A0A2P6TMX4 34462576
    598739 6zzx:2 (2.7) BS12 CHL ? GO:0009765 ... A0A2P6TMX4 34462576
    598740 6zzx:2 (2.7) BS13 CLA ? GO:0009765 ... A0A2P6TMX4 34462576
    598741 6zzx:2 (2.7) BS14 CLA ? GO:0009765 ... A0A2P6TMX4 34462576
    598742 6zzx:3 (2.7) BS01 CLA ? GO:0009765 ... A0A2P6TMT4 34462576
    598743 6zzx:3 (2.7) BS02 CLA ? GO:0009765 ... A0A2P6TMT4 34462576
    598744 6zzx:3 (2.7) BS03 CLA ? GO:0009765 ... A0A2P6TMT4 34462576
    598745 6zzx:3 (2.7) BS04 RRX ? GO:0009765 ... A0A2P6TMT4 34462576
    598746 6zzx:3 (2.7) BS05 CLA ? GO:0009765 ... A0A2P6TMT4 34462576
    598747 6zzx:3 (2.7) BS06 CLA ? GO:0009765 ... A0A2P6TMT4 34462576
    598748 6zzx:3 (2.7) BS07 CHL ? GO:0009765 ... A0A2P6TMT4 34462576
    598749 6zzx:3 (2.7) BS08 CHL ? GO:0009765 ... A0A2P6TMT4 34462576
    598750 6zzx:3 (2.7) BS09 CLA ? GO:0009765 ... A0A2P6TMT4 34462576
    598751 6zzx:3 (2.7) BS10 CLA ? GO:0009765 ... A0A2P6TMT4 34462576
    598752 6zzx:3 (2.7) BS11 CLA ? GO:0009765 ... A0A2P6TMT4 34462576
    598753 6zzx:3 (2.7) BS12 CHL ? GO:0009765 ... A0A2P6TMT4 34462576
    598754 6zzx:3 (2.7) BS13 CLA ? GO:0009765 ... A0A2P6TMT4 34462576
    598755 6zzx:3 (2.7) BS14 CHL ? GO:0009765 ... A0A2P6TMT4 34462576
    598756 6zzx:3 (2.7) BS15 CLA ? GO:0009765 ... A0A2P6TMT4 34462576
    598757 6zzx:3 (2.7) BS16 CLA ? GO:0009765 ... A0A2P6TMT4 34462576
    598758 6zzx:3 (2.7) BS17 CLA ? GO:0009765 ... A0A2P6TMT4 34462576
    598759 6zzx:3 (2.7) BS18 CHL ? GO:0009765 ... A0A2P6TMT4 34462576
    598760 6zzx:4 (2.7) BS01 CHL N/A GO:0009765 ... N/A 34462576
    598761 6zzx:4 (2.7) BS02 CLA N/A GO:0009765 ... N/A 34462576
    598762 6zzx:4 (2.7) BS03 CLA N/A GO:0009765 ... N/A 34462576
    598763 6zzx:4 (2.7) BS04 CLA N/A GO:0009765 ... N/A 34462576
    598764 6zzx:4 (2.7) BS05 CLA N/A GO:0009765 ... N/A 34462576
    598765 6zzx:4 (2.7) BS06 CLA N/A GO:0009765 ... N/A 34462576
    598766 6zzx:4 (2.7) BS07 CLA N/A GO:0009765 ... N/A 34462576
    598767 6zzx:4 (2.7) BS08 CLA N/A GO:0009765 ... N/A 34462576
    598768 6zzx:4 (2.7) BS09 CLA N/A GO:0009765 ... N/A 34462576
    598769 6zzx:4 (2.7) BS10 CLA N/A GO:0009765 ... N/A 34462576
    598770 6zzx:4 (2.7) BS11 CLA N/A GO:0009765 ... N/A 34462576
    598771 6zzx:4 (2.7) BS12 CLA N/A GO:0009765 ... N/A 34462576
    598772 6zzx:4 (2.7) BS13 CHL N/A GO:0009765 ... N/A 34462576
    598773 6zzx:4 (2.7) BS14 CLA N/A GO:0009765 ... N/A 34462576
    598774 6zzx:4 (2.7) BS15 CLA N/A GO:0009765 ... N/A 34462576
    598775 6zzx:4 (2.7) BS16 CLA N/A GO:0009765 ... N/A 34462576
    598776 6zzx:4 (2.7) BS17 CHL N/A GO:0009765 ... N/A 34462576
    598777 6zzx:4 (2.7) BS18 CHL N/A GO:0009765 ... N/A 34462576
    598778 6zzx:5 (2.7) BS01 CLA ? GO:0009765 ... A0A2P6U4K1 34462576
    598779 6zzx:5 (2.7) BS02 CLA ? GO:0009765 ... A0A2P6U4K1 34462576
    598780 6zzx:5 (2.7) BS03 CLA ? GO:0009765 ... A0A2P6U4K1 34462576
    598781 6zzx:5 (2.7) BS04 CLA ? GO:0009765 ... A0A2P6U4K1 34462576
    598782 6zzx:5 (2.7) BS05 CLA ? GO:0009765 ... A0A2P6U4K1 34462576
    598783 6zzx:5 (2.7) BS06 CLA ? GO:0009765 ... A0A2P6U4K1 34462576
    598784 6zzx:5 (2.7) BS07 CLA ? GO:0009765 ... A0A2P6U4K1 34462576
    598785 6zzx:5 (2.7) BS08 CLA ? GO:0009765 ... A0A2P6U4K1 34462576
    598786 6zzx:5 (2.7) BS09 CLA ? GO:0009765 ... A0A2P6U4K1 34462576
    598787 6zzx:5 (2.7) BS10 CLA ? GO:0009765 ... A0A2P6U4K1 34462576
    598788 6zzx:5 (2.7) BS11 CHL ? GO:0009765 ... A0A2P6U4K1 34462576
    598789 6zzx:5 (2.7) BS12 CHL ? GO:0009765 ... A0A2P6U4K1 34462576
    598790 6zzx:5 (2.7) BS13 CLA ? GO:0009765 ... A0A2P6U4K1 34462576
    598791 6zzx:5 (2.7) BS14 CHL ? GO:0009765 ... A0A2P6U4K1 34462576
    598792 6zzx:5 (2.7) BS15 CLA ? GO:0009765 ... A0A2P6U4K1 34462576
    598793 6zzx:5 (2.7) BS16 CLA ? GO:0009765 ... A0A2P6U4K1 34462576
    598794 6zzx:5 (2.7) BS17 CHL ? GO:0009765 ... A0A2P6U4K1 34462576
    598795 6zzx:5 (2.7) BS18 CHL ? GO:0009765 ... A0A2P6U4K1 34462576
    598796 6zzx:5 (2.7) BS19 CLA ? GO:0009765 ... A0A2P6U4K1 34462576
    598797 6zzx:5 (2.7) BS20 CHL ? GO:0009765 ... A0A2P6U4K1 34462576
    598798 6zzx:6 (2.7) BS01 CLA ? GO:0009765 ... A0A2P6TPR7 34462576
    598799 6zzx:6 (2.7) BS02 CHL ? GO:0009765 ... A0A2P6TPR7 34462576
    598800 6zzx:6 (2.7) BS03 CLA ? GO:0009765 ... A0A2P6TPR7 34462576

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).