SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2988 2989 2990 2991 2992 2993 2994 2995 2996 2997 2998 2999 3000 3001 3002 3003 3004 3005 3006 3007 3008 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    599401 7a01:D2 (3.6) BS02 rna ? GO:0003735 ... G1SYU7 33296660
    599402 7a01:E2 (3.6) BS01 rna ? GO:0003735 ... P63048 33296660
    599403 7a01:E2 (3.6) BS02 ZN ? GO:0003735 ... P63048 33296660
    599404 7a01:E3 (3.6) BS01 rna ? N/A G1T168 33296660
    599405 7a01:F2 (3.6) BS01 rna ? GO:0003735 ... G1T040 33296660
    599406 7a01:F2 (3.6) BS02 ZN ? GO:0003735 ... G1T040 33296660
    599407 7a01:F3 (3.6) BS01 rna ? GO:0003735 ... G1SP51 33296660
    599408 7a01:F3 (3.6) BS02 rna ? GO:0003735 ... G1SP51 33296660
    599409 7a01:G2 (3.6) BS01 rna ? GO:0000027 ... P19949 33296660
    599410 7a01:G2 (3.6) BS02 rna ? GO:0000027 ... P19949 33296660
    599411 7a01:G3 (3.6) BS01 rna ? GO:0003735 ... G1TRM4 33296660
    599412 7a01:G5 (3.6) BS01 rna ? GO:0003676 ... G1TPG3 33296660
    599413 7a01:H2 (3.6) BS01 rna ? GO:0003735 ... G1SCJ6 33296660
    599414 7a01:H2 (3.6) BS02 rna ? GO:0003735 ... G1SCJ6 33296660
    599415 7a01:H3 (3.6) BS01 rna ? GO:0002181 ... G1U7M4 33296660
    599416 7a01:H3 (3.6) BS02 ZN ? GO:0002181 ... G1U7M4 33296660
    599417 7a01:H5 (3.6) BS01 rna ? GO:0000028 ... G1TN62 33296660
    599418 7a01:I2 (3.6) BS01 rna ? GO:0003735 ... G1SY53 33296660
    599419 7a01:I2 (3.6) BS02 ZN ? GO:0003735 ... G1SY53 33296660
    599420 7a01:I3 (3.6) BS01 rna ? GO:0003723 ... A0A5F9CX53 33296660
    599421 7a01:I5 (3.6) BS01 rna ? GO:0003735 ... A0A5F9CBF4 33296660
    599422 7a01:J2 (3.6) BS01 rna ? GO:0003735 ... G1U7L1 33296660
    599423 7a01:J5 (3.6) BS01 rna ? GO:0003735 ... G1TG89 33296660
    599424 7a01:K2 (3.6) BS01 rna ? N/A G1SPK4 33296660
    599425 7a01:L2 (3.6) BS01 rna ? GO:0003735 ... B7NZQ2 33296660
    599426 7a01:L2 (3.6) BS02 rna ? GO:0003735 ... B7NZQ2 33296660
    599427 7a01:L3 (3.6) BS01 rna ? GO:0003735 ... G1TZ76 33296660
    599428 7a01:M2 (3.6) BS01 rna ? GO:0003723 ... G1SMR7 33296660
    599429 7a01:M3 (3.6) BS01 rna ? N/A G1TDB3 33296660
    599430 7a01:N3 (3.6) BS01 rna ? GO:0003723 ... U3KMN4 33296660
    599431 7a01:N3 (3.6) BS02 rna ? GO:0003723 ... U3KMN4 33296660
    599432 7a01:O3 (3.6) BS01 rna ? GO:0003735 ... Q56JV1 33296660
    599433 7a01:O3 (3.6) BS02 ZN ? GO:0003735 ... Q56JV1 33296660
    599434 7a01:P3 (3.6) BS01 rna ? GO:0003735 ... A6H769 33296660
    599435 7a01:Q3 (3.6) BS01 rna ? GO:0003735 ... G1SK22 33296660
    599436 7a01:R2 (3.6) BS01 rna ? GO:0003735 ... G1U1N5 33296660
    599437 7a01:S2 (3.6) BS01 rna ? GO:0002181 ... Q07020 33296660
    599438 7a01:T2 (3.6) BS01 rna ? GO:0003735 ... G1SKF7 33296660
    599439 7a01:T3 (3.6) BS01 rna ? GO:0003735 ... G1SZ47 33296660
    599440 7a01:U2 (3.6) BS01 rna ? GO:0000463 ... G1SV32 33296660
    599441 7a01:U2 (3.6) BS02 rna ? GO:0000463 ... G1SV32 33296660
    599442 7a01:U3 (3.6) BS01 rna ? GO:0003735 ... G1TJH8 33296660
    599443 7a01:V2 (3.6) BS01 rna ? GO:0000470 ... P62424 33296660
    599444 7a01:V2 (3.6) BS02 rna ? GO:0000470 ... P62424 33296660
    599445 7a01:V3 (3.6) BS01 rna ? GO:0003735 ... G1SS70 33296660
    599446 7a01:V3 (3.6) BS02 rna ? GO:0003735 ... G1SS70 33296660
    599447 7a01:W2 (3.6) BS01 rna ? GO:0002181 ... G1SWI6 33296660
    599448 7a01:W3 (3.6) BS01 rna N/A GO:0003723 ... N/A 33296660
    599449 7a01:W3 (3.6) BS02 rna N/A GO:0003723 ... N/A 33296660
    599450 7a01:X2 (3.6) BS01 rna ? GO:0003735 ... B7NZQ2 33296660
    599451 7a01:X2 (3.6) BS02 rna ? GO:0003735 ... B7NZQ2 33296660
    599452 7a01:Y2 (3.6) BS01 rna ? GO:0003735 ... G1TUB8 33296660
    599453 7a01:Y2 (3.6) BS02 rna ? GO:0003735 ... G1TUB8 33296660
    599454 7a01:Y3 (3.6) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 33296660
    599455 7a01:Y3 (3.6) BS02 rna 4.2.99.18 GO:0003677 ... G1TNM3 33296660
    599456 7a01:a3 (3.6) BS01 rna ? GO:0001891 ... G1SJB4 33296660
    599457 7a01:a5 (3.6) BS01 rna ? GO:0003735 ... G1T1F0 33296660
    599458 7a01:a7 (3.6) BS01 rna N/A GO:0003735 ... N/A 33296660
    599459 7a01:b3 (3.6) BS01 rna ? GO:0003735 ... G1TM55 33296660
    599460 7a01:c3 (3.6) BS01 rna ? GO:0003735 ... G1TJW1 33296660
    599461 7a01:c3 (3.6) BS02 rna ? GO:0003735 ... G1TJW1 33296660
    599462 7a01:d3 (3.6) BS01 rna ? GO:0003723 ... B7NZS8 33296660
    599463 7a01:e3 (3.6) BS01 rna ? GO:0003735 ... G1SFR8 33296660
    599464 7a01:f3 (3.6) BS01 rna ? GO:0000028 ... G1TIB4 33296660
    599465 7a01:j3 (3.6) BS01 rna ? GO:0003723 ... G1TK17 33296660
    599466 7a01:k2 (3.6) BS01 rna ? GO:0003735 ... G1T6D1 33296660
    599467 7a01:l2 (3.6) BS01 rna ? GO:0003735 ... G1SE28 33296660
    599468 7a01:m2 (3.6) BS01 rna ? GO:0003735 ... G1SE76 33296660
    599469 7a01:m2 (3.6) BS02 rna ? GO:0003735 ... G1SE76 33296660
    599470 7a01:o2 (3.6) BS01 rna ? GO:0003723 ... G1SQH0 33296660
    599471 7a01:o2 (3.6) BS02 rna ? GO:0003723 ... G1SQH0 33296660
    599472 7a01:p2 (3.6) BS01 rna ? GO:0003735 ... G1U001 33296660
    599473 7a01:q2 (3.6) BS01 rna ? GO:0003735 ... G1SNY0 33296660
    599474 7a01:r2 (3.6) BS01 rna ? GO:0003735 ... G1SGR6 33296660
    599475 7a01:s3 (3.6) BS01 rna ? GO:0003735 ... P62866 33296660
    599476 7a01:t2 (3.6) BS01 rna ? GO:0003735 ... G1SVW5 33296660
    599477 7a01:t2 (3.6) BS02 rna ? GO:0003735 ... G1SVW5 33296660
    599478 7a01:u2 (3.6) BS01 rna ? GO:0003735 ... G1SHG0 33296660
    599479 7a01:v2 (3.6) BS01 rna ? GO:0003735 ... G1TUN8 33296660
    599480 7a01:w2 (3.6) BS01 rna ? GO:0003729 ... G5B8P1 33296660
    599481 7a01:x2 (3.6) BS01 rna ? GO:0000049 ... G1SF08 33296660
    599482 7a01:y2 (3.6) BS01 rna ? GO:0003735 ... G1TXG5 33296660
    599483 7a04:A (2.15) BS01 QTK 2.7.1.32
    2.7.1.82
    N/A P35790 32977218
    599484 7a04:B (2.15) BS01 QTK 2.7.1.32
    2.7.1.82
    N/A P35790 32977218
    599485 7a06:A (1.8) BS01 QTH 2.7.1.32
    2.7.1.82
    N/A P35790 32977218
    599486 7a06:A (1.8) BS02 QTH 2.7.1.32
    2.7.1.82
    N/A P35790 32977218
    599487 7a08:a (3.11) BS01 ZN 2.7.7.86 N/A Q8C6L5 32911480
    599488 7a08:b (3.11) BS01 dna ? GO:0000786 ... Q93077 32911480
    599489 7a08:b (3.11) BS02 dna ? GO:0000786 ... Q93077 32911480
    599490 7a08:c (3.11) BS01 dna ? GO:0000786 ... P62807 32911480
    599491 7a08:c (3.11) BS02 dna ? GO:0000786 ... P62807 32911480
    599492 7a08:d (3.11) BS01 dna ? GO:0000775 ... P84243 32911480
    599493 7a08:d (3.11) BS02 dna ? GO:0000775 ... P84243 32911480
    599494 7a08:e (3.11) BS01 dna ? GO:0000781 ... P62805 32911480
    599495 7a08:e (3.11) BS02 dna ? GO:0000781 ... P62805 32911480
    599496 7a08:f (3.11) BS01 dna ? GO:0000786 ... Q93077 32911480
    599497 7a08:f (3.11) BS02 dna ? GO:0000786 ... Q93077 32911480
    599498 7a08:g (3.11) BS01 dna ? GO:0000786 ... P62807 32911480
    599499 7a08:h (3.11) BS01 dna ? GO:0000775 ... P84243 32911480
    599500 7a08:h (3.11) BS02 dna ? GO:0000775 ... P84243 32911480
    599501 7a08:i (3.11) BS01 dna ? GO:0000781 ... P62805 32911480
    599502 7a09:4 (3.5) BS01 rna ? GO:0001701 ... P20042 33289941
    599503 7a09:4 (3.5) BS02 rna ? GO:0001701 ... P20042 33289941
    599504 7a09:4 (3.5) BS03 GTP ? GO:0001701 ... P20042 33289941
    599505 7a09:C (3.5) BS01 rna ? GO:0003723 ... Q99613 33289941
    599506 7a09:D (3.5) BS01 rna ? GO:0002181 ... P62244 33289941
    599507 7a09:G (3.5) BS01 rna ? GO:0003723 ... P47813 33289941
    599508 7a09:J (3.5) BS01 rna 3.6.5.- GO:0003924 ... P61221 33289941
    599509 7a09:J (3.5) BS02 SF4 3.6.5.- GO:0003924 ... P61221 33289941
    599510 7a09:J (3.5) BS03 SF4 3.6.5.- GO:0003924 ... P61221 33289941
    599511 7a09:J (3.5) BS04 ADP 3.6.5.- GO:0003924 ... P61221 33289941
    599512 7a09:J (3.5) BS05 ATP 3.6.5.- GO:0003924 ... P61221 33289941
    599513 7a09:J (3.5) BS06 MG 3.6.5.- GO:0003924 ... P61221 33289941
    599514 7a09:O (3.5) BS01 rna ? GO:0000423 ... P05198 33289941
    599515 7a09:P (3.5) BS01 rna ? GO:0002181 ... P62851 33289941
    599516 7a09:Q (3.5) BS01 rna ? GO:0002181 ... P62854 33289941
    599517 7a09:Q (3.5) BS02 ZN ? GO:0002181 ... P62854 33289941
    599518 7a09:R (3.5) BS01 rna ? GO:0000028 ... P42677 33289941
    599519 7a09:S (3.5) BS01 rna ? GO:0000028 ... P62857 33289941
    599520 7a09:T (3.5) BS01 rna ? GO:0003735 ... P62861 33289941
    599521 7a09:U (3.5) BS01 rna ? GO:0002181 ... P62979 33289941
    599522 7a09:U (3.5) BS02 ZN ? GO:0002181 ... P62979 33289941
    599523 7a09:V (3.5) BS01 rna ? GO:0001891 ... P63244 33289941
    599524 7a09:Y (3.5) BS01 rna 3.6.5.3 GO:0000049 ... P41091 33289941
    599525 7a09:Y (3.5) BS02 GTP 3.6.5.3 GO:0000049 ... P41091 33289941
    599526 7a09:Y (3.5) BS03 MG 3.6.5.3 GO:0000049 ... P41091 33289941
    599527 7a09:Z (3.5) BS01 rna ? GO:0003723 ... P41567 33289941
    599528 7a09:a (3.5) BS01 rna ? GO:0000028 ... P08865 33289941
    599529 7a09:b (3.5) BS01 rna 4.2.99.18 GO:0000977 ... P23396 33289941
    599530 7a09:c (3.5) BS01 rna ? GO:0002181 ... P46781 33289941
    599531 7a09:d (3.5) BS01 rna ? GO:0002181 ... P15880 33289941
    599532 7a09:e (3.5) BS01 rna ? GO:0000028 ... P46782 33289941
    599533 7a09:g (3.5) BS01 rna ? GO:0000462 ... P62249 33289941
    599534 7a09:h (3.5) BS01 rna ? GO:0002181 ... P60866 33289941
    599535 7a09:i (3.5) BS01 rna ? GO:0000028 ... P62263 33289941
    599536 7a09:j (3.5) BS01 rna ? GO:0002181 ... P62266 33289941
    599537 7a09:k (3.5) BS01 rna ? GO:0002181 ... P62269 33289941
    599538 7a09:l (3.5) BS01 rna ? GO:0002181 ... P62273 33289941
    599539 7a09:l (3.5) BS02 ZN ? GO:0002181 ... P62273 33289941
    599540 7a09:m (3.5) BS01 rna ? GO:0002181 ... P62277 33289941
    599541 7a09:n (3.5) BS01 rna ? GO:0002181 ... P62280 33289941
    599542 7a09:o (3.5) BS01 rna ? GO:0000028 ... P62841 33289941
    599543 7a09:p (3.5) BS01 rna ? GO:0002181 ... P61247 33289941
    599544 7a09:q (3.5) BS01 rna ? GO:0002181 ... P62701 33289941
    599545 7a09:r (3.5) BS01 rna ? GO:0000082 ... P62753 33289941
    599546 7a09:s (3.5) BS01 rna ? GO:0001843 ... P62081 33289941
    599547 7a09:t (3.5) BS01 rna ? GO:0000462 ... P62241 33289941
    599548 7a09:u (3.5) BS01 rna ? GO:0002181 ... P46783 33289941
    599549 7a09:v (3.5) BS01 rna ? GO:0002181 ... P25398 33289941
    599550 7a09:w (3.5) BS01 rna ? GO:0002181 ... P08708 33289941
    599551 7a09:x (3.5) BS01 rna ? GO:0000028 ... P39019 33289941
    599552 7a09:z (3.5) BS01 rna ? GO:0003735 ... E7ETK0 33289941
    599553 7a0b:A (1.77) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 34081441
    599554 7a0b:A (1.77) BS02 QTQ 2.4.2.29 GO:0002099 ... P28720 34081441
    599555 7a0b:A (1.77) BS03 QTQ 2.4.2.29 GO:0002099 ... P28720 34081441
    599556 7a0c:A (1.9) BS01 QTT ? GO:0005515 ... P33590 33079395
    599557 7a0c:A (1.9) BS02 MG ? GO:0005515 ... P33590 33079395
    599558 7a0c:B (1.9) BS01 QTT ? GO:0005515 ... P33590 33079395
    599559 7a0c:B (1.9) BS02 MG ? GO:0005515 ... P33590 33079395
    599560 7a0c:B (1.9) BS03 MG ? GO:0005515 ... P33590 33079395
    599561 7a0c:B (1.9) BS04 MG ? GO:0005515 ... P33590 33079395
    599562 7a0j:BBB (1.95) BS01 FUC 2.7.11.1 N/A Q9LX29 N/A
    599563 7a0j:CCC (1.95) BS01 FUC 2.7.11.1 N/A Q9LX29 N/A
    599564 7a0k:B (2.7) BS01 FUC ? N/A A9RKG8 N/A
    599565 7a0l:A (1.33) BS01 AZA 1.7.3.3 GO:0004846 ... Q00511 33520242
    599566 7a0p:A (2.18) BS01 ZN 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851
    599567 7a0p:A (2.18) BS02 QTW 6.1.1.4 GO:0000166 ... Q5FAJ3 33248851 MOAD: Ki=31.28nM
    599568 7a0r:1 (3.3) BS01 rna ? GO:0003735 ... Q9RSS4 34417608
    599569 7a0r:2 (3.3) BS01 rna ? GO:0003735 ... Q9RSH2 34417608
    599570 7a0r:3 (3.3) BS01 rna ? GO:0003735 ... Q9RSW6 34417608
    599571 7a0r:A (3.3) BS01 rna ? GO:0002181 ... Q9RXJ9 34417608
    599572 7a0r:A (3.3) BS02 MG ? GO:0002181 ... Q9RXJ9 34417608
    599573 7a0r:B (3.3) BS01 rna ? GO:0003735 ... Q9RXK2 34417608
    599574 7a0r:C (3.3) BS01 rna ? GO:0003735 ... Q9RXK1 34417608
    599575 7a0r:D (3.3) BS01 rna ? GO:0000049 ... Q9RXJ0 34417608
    599576 7a0r:D (3.3) BS02 rna ? GO:0000049 ... Q9RXJ0 34417608
    599577 7a0r:E (3.3) BS01 rna ? GO:0002181 ... Q9RSL3 34417608
    599578 7a0r:G (3.3) BS01 rna ? GO:0003735 ... Q9RXY1 34417608
    599579 7a0r:H (3.3) BS01 rna ? GO:0003735 ... Q9RXJ2 34417608
    599580 7a0r:I (3.3) BS01 rna ? GO:0003735 ... Q9RSK9 34417608
    599581 7a0r:J (3.3) BS01 rna ? GO:0000049 ... Q9RXJ5 34417608
    599582 7a0r:J (3.3) BS02 rna ? GO:0000049 ... Q9RXJ5 34417608
    599583 7a0r:J (3.3) BS03 MG ? GO:0000049 ... Q9RXJ5 34417608
    599584 7a0r:K (3.3) BS01 rna ? GO:0003735 ... Q9RSJ5 34417608
    599585 7a0r:L (3.3) BS01 rna ? GO:0003735 ... Q9RSL2 34417608
    599586 7a0r:L (3.3) BS02 rna ? GO:0003735 ... Q9RSL2 34417608
    599587 7a0r:M (3.3) BS01 rna ? GO:0003735 ... Q9RWB4 34417608
    599588 7a0r:M (3.3) BS02 MG ? GO:0003735 ... Q9RWB4 34417608
    599589 7a0r:N (3.3) BS01 rna ? GO:0000027 ... Q9RSW7 34417608
    599590 7a0r:O (3.3) BS01 rna ? GO:0003723 ... Q9RY64 34417608
    599591 7a0r:P (3.3) BS01 rna ? GO:0003735 ... Q9RXJ7 34417608
    599592 7a0r:Q (3.3) BS01 rna ? GO:0003735 ... Q9RXK0 34417608
    599593 7a0r:R (3.3) BS01 rna ? GO:0003723 ... Q9RXJ1 34417608
    599594 7a0r:S (3.3) BS01 rna ? GO:0003735 ... Q9RX88 34417608
    599595 7a0r:S (3.3) BS02 rna ? GO:0003735 ... Q9RX88 34417608
    599596 7a0r:T (3.3) BS01 rna ? GO:0003735 ... Q9RY65 34417608
    599597 7a0r:U (3.3) BS01 rna ? GO:0003735 ... Q9RRG8 34417608
    599598 7a0r:V (3.3) BS01 rna ? GO:0003735 ... Q9RXJ4 34417608
    599599 7a0r:W (3.3) BS01 rna ? GO:0003735 ... Q9RSL0 34417608
    599600 7a0r:W (3.3) BS02 rna ? GO:0003735 ... Q9RSL0 34417608

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).