SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    600201 7a4p:a (4.2) BS07 CHL ? GO:0009765 ... A0A2P6TT36 34462576
    600202 7a4p:a (4.2) BS08 CLA ? GO:0009765 ... A0A2P6TT36 34462576
    600203 7a4p:a (4.2) BS09 CLA ? GO:0009765 ... A0A2P6TT36 34462576
    600204 7a4p:a (4.2) BS10 CHL ? GO:0009765 ... A0A2P6TT36 34462576
    600205 7a4p:a (4.2) BS11 CHL ? GO:0009765 ... A0A2P6TT36 34462576
    600206 7a4p:a (4.2) BS12 CLA ? GO:0009765 ... A0A2P6TT36 34462576
    600207 7a4p:a (4.2) BS13 CLA ? GO:0009765 ... A0A2P6TT36 34462576
    600208 7a4p:a (4.2) BS14 CHL ? GO:0009765 ... A0A2P6TT36 34462576
    600209 7a4p:a (4.2) BS15 CLA ? GO:0009765 ... A0A2P6TT36 34462576
    600210 7a4p:a (4.2) BS16 LPX ? GO:0009765 ... A0A2P6TT36 34462576
    600211 7a4p:a (4.2) BS17 GG0 ? GO:0009765 ... A0A2P6TT36 34462576
    600212 7a4q:A (1.42) BS01 QY2 2.7.11.1 GO:0004672 ... P68400 37904048
    600213 7a4r:A (1.8) BS01 QY8 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600214 7a4r:B (1.8) BS01 QY8 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600215 7a4t:A (2.124) BS01 peptide N/A N/A N/A 33893235
    600216 7a4t:A (2.124) BS02 peptide N/A N/A N/A 33893235
    600217 7a4v:A (1.94) BS01 ADP 3.6.4.10 GO:0005524 ... G3I8R9 33295873
    600218 7a4w:A (2.7) BS01 QYH 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600219 7a4w:B (2.7) BS01 QYH 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600220 7a4x:A (2.05) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 34081441
    600221 7a4y:B (2.157) BS01 peptide N/A N/A N/A 33893235
    600222 7a4y:B (2.157) BS02 peptide N/A N/A N/A 33893235
    600223 7a4z:A (1.9) BS01 6SD 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600224 7a51:A (1.9) BS01 QYK 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600225 7a52:A (2.1) BS01 QYB 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600226 7a52:B (2.1) BS01 QYB 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600227 7a53:A (2.2) BS01 QYZ 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600228 7a53:B (2.2) BS01 QYZ 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600229 7a54:A (2.7) BS01 DAN 3.2.1.18 GO:0004308 ... P62575 33150981 BindingDB: IC50=4800nM, Ki=1.6e+3nM
    600230 7a54:B (2.7) BS01 DAN 3.2.1.18 GO:0004308 ... P62575 33150981 BindingDB: IC50=4800nM, Ki=1.6e+3nM
    600231 7a55:A (2.2) BS01 QZ2 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600232 7a55:B (2.2) BS01 QZ2 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600233 7a57:B (3.155) BS01 FUC ? GO:0019048 ... Q8JPR1 36827185
    600234 7a58:A (-1.00) BS01 SF4 ? GO:0009055 ... A1EBT4 33124176
    600235 7a5b:A (2.6) BS01 MFR 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600236 7a5b:B (2.6) BS01 MFR 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600237 7a5d:A (1.8) BS01 QYW 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34143631
    600238 7a5e:A (1.904) BS01 ANP ? GO:0003777 ... P46873 33513284
    600239 7a5e:A (1.904) BS02 MG ? GO:0003777 ... P46873 33513284
    600240 7a5e:B (1.904) BS01 ANP ? GO:0003777 ... P46873 33513284
    600241 7a5e:B (1.904) BS02 MG ? GO:0003777 ... P46873 33513284
    600242 7a5f:03 (4.4) BS01 rna ? GO:0003723 ... Q9BYC8 33243891
    600243 7a5f:03 (4.4) BS02 ZN ? GO:0003723 ... Q9BYC8 33243891
    600244 7a5f:13 (4.4) BS01 rna ? GO:0003735 ... O75394 33243891
    600245 7a5f:23 (4.4) BS01 rna ? GO:0003735 ... Q9BQ48 33243891
    600246 7a5f:33 (4.4) BS01 rna ? GO:0003735 ... Q9NZE8 33243891
    600247 7a5f:43 (4.4) BS01 rna ? GO:0003735 ... Q9P0J6 33243891
    600248 7a5f:43 (4.4) BS02 ZN ? GO:0003735 ... Q9P0J6 33243891
    600249 7a5f:53 (4.4) BS01 rna ? GO:0003723 ... Q9BZE1 33243891
    600250 7a5f:63 (4.4) BS01 rna ? GO:0005515 ... Q96DV4 33243891
    600251 7a5f:63 (4.4) BS02 rna ? GO:0005515 ... Q96DV4 33243891
    600252 7a5f:93 (4.4) BS01 rna ? GO:0003723 ... Q8IXM3 33243891
    600253 7a5f:A (4.4) BS01 rna ? GO:0003723 ... Q9NQ50 33243891
    600254 7a5f:A (4.4) BS02 rna ? GO:0003723 ... Q9NQ50 33243891
    600255 7a5f:B6 (4.4) BS01 rna ? GO:0003735 ... Q9Y399 33243891
    600256 7a5f:B6 (4.4) BS02 ZN ? GO:0003735 ... Q9Y399 33243891
    600257 7a5f:C6 (4.4) BS01 rna ? GO:0003723 ... Q96EL2 33243891
    600258 7a5f:D (4.4) BS01 rna ? GO:0003723 ... Q9BYD2 33243891
    600259 7a5f:D3 (4.4) BS01 rna ? GO:0003723 ... Q5T653 33243891
    600260 7a5f:D6 (4.4) BS01 rna ? GO:0003723 ... P82675 33243891
    600261 7a5f:E3 (4.4) BS01 rna ? GO:0003723 ... P09001 33243891
    600262 7a5f:E6 (4.4) BS01 rna ? GO:0003735 ... P82932 33243891
    600263 7a5f:F3 (4.4) BS01 rna ? GO:0003723 ... Q9BYD3 33243891
    600264 7a5f:F6 (4.4) BS01 rna ? GO:0000028 ... Q9Y2R9 33243891
    600265 7a5f:F6 (4.4) BS02 rna ? GO:0000028 ... Q9Y2R9 33243891
    600266 7a5f:F6 (4.4) BS03 rna ? GO:0000028 ... Q9Y2R9 33243891
    600267 7a5f:G6 (4.4) BS01 rna ? GO:0003723 ... P82933 33243891
    600268 7a5f:H3 (4.4) BS01 rna ? GO:0003723 ... Q9BYD2 33243891
    600269 7a5f:H6 (4.4) BS01 rna ? GO:0005739 ... P82664 33243891
    600270 7a5f:I3 (4.4) BS01 rna ? GO:0003723 ... Q7Z7H8 33243891
    600271 7a5f:I3 (4.4) BS02 peptide ? GO:0003723 ... Q7Z7H8 33243891
    600272 7a5f:I6 (4.4) BS01 rna ? GO:0003723 ... P82912 33243891
    600273 7a5f:J3 (4.4) BS01 rna ? GO:0003723 ... Q9Y3B7 33243891
    600274 7a5f:J6 (4.4) BS01 rna ? GO:0003723 ... O15235 33243891
    600275 7a5f:K3 (4.4) BS01 rna ? GO:0003723 ... Q9BYD1 33243891
    600276 7a5f:K6 (4.4) BS01 rna ? GO:0003723 ... O60783 33243891
    600277 7a5f:L3 (4.4) BS01 rna ? GO:0003723 ... Q6P1L8 33243891
    600278 7a5f:L6 (4.4) BS01 rna ? GO:0003723 ... P82914 33243891
    600279 7a5f:M3 (4.4) BS01 rna ? GO:0003723 ... Q9P015 33243891
    600280 7a5f:M6 (4.4) BS01 rna ? GO:0003735 ... Q9Y3D3 33243891
    600281 7a5f:N3 (4.4) BS01 rna ? GO:0003735 ... Q9NX20 33243891
    600282 7a5f:N3 (4.4) BS02 peptide ? GO:0003735 ... Q9NX20 33243891
    600283 7a5f:N6 (4.4) BS01 rna ? GO:0003735 ... Q9Y2R5 33243891
    600284 7a5f:O3 (4.4) BS01 rna ? GO:0003735 ... Q9NRX2 33243891
    600285 7a5f:O6 (4.4) BS01 rna ? GO:0003735 ... Q9Y676 33243891
    600286 7a5f:P3 (4.4) BS01 rna ? GO:0003723 ... Q9H0U6 33243891
    600287 7a5f:P6 (4.4) BS01 rna ? GO:0003735 ... Q9Y3D5 33243891
    600288 7a5f:P6 (4.4) BS02 ZN ? GO:0003735 ... Q9Y3D5 33243891
    600289 7a5f:Q3 (4.4) BS01 rna ? GO:0003735 ... P49406 33243891
    600290 7a5f:Q6 (4.4) BS01 rna ? GO:0003723 ... P82921 33243891
    600291 7a5f:R3 (4.4) BS01 rna ? GO:0003723 ... Q9BYC9 33243891
    600292 7a5f:S3 (4.4) BS01 rna ? GO:0003723 ... Q7Z2W9 33243891
    600293 7a5f:S6 (4.4) BS01 rna ? GO:0003723 ... Q9Y3D9 33243891
    600294 7a5f:T3 (4.4) BS01 rna ? GO:0003723 ... Q9NWU5 33243891
    600295 7a5f:T6 (4.4) BS01 rna ? GO:0003735 ... P82663 33243891
    600296 7a5f:T6 (4.4) BS02 ZN ? GO:0003735 ... P82663 33243891
    600297 7a5f:U3 (4.4) BS01 rna ? GO:0001650 ... Q16540 33243891
    600298 7a5f:U6 (4.4) BS01 rna ? GO:0003723 ... Q9BYN8 33243891
    600299 7a5f:V3 (4.4) BS01 rna ? GO:0003723 ... Q96A35 33243891
    600300 7a5f:V6 (4.4) BS01 rna ? GO:0000049 ... Q92552 33243891
    600301 7a5f:W3 (4.4) BS01 rna ? GO:0003723 ... Q9P0M9 33243891
    600302 7a5f:X3 (4.4) BS01 rna ? GO:0003723 ... Q13084 33243891
    600303 7a5f:X3 (4.4) BS02 rna ? GO:0003723 ... Q13084 33243891
    600304 7a5f:X6 (4.4) BS01 rna ? GO:0003723 ... P51398 33243891
    600305 7a5f:X6 (4.4) BS02 GDP ? GO:0003723 ... P51398 33243891
    600306 7a5f:Y3 (4.4) BS01 rna ? GO:0003735 ... Q9HD33 33243891
    600307 7a5f:Z3 (4.4) BS01 rna ? GO:0003735 ... Q8TCC3 33243891
    600308 7a5f:Z6 (4.4) BS01 rna ? GO:0003735 ... Q9Y291 33243891
    600309 7a5f:a3 (4.4) BS01 rna ? GO:0003723 ... Q9Y6G3 33243891
    600310 7a5f:a6 (4.4) BS01 rna ? GO:0003735 ... P82930 33243891
    600311 7a5f:b3 (4.4) BS01 rna ? GO:0003723 ... Q8N983 33243891
    600312 7a5f:c3 (4.4) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 33243891
    600313 7a5f:c6 (4.4) BS01 rna ? GO:0001650 ... Q96BP2 33243891
    600314 7a5f:d6 (4.4) BS01 rna ? GO:0005515 ... Q9NWT8 33243891
    600315 7a5f:f3 (4.4) BS01 rna ? GO:0005515 ... Q96GC5 33243891
    600316 7a5f:f3 (4.4) BS02 rna ? GO:0005515 ... Q96GC5 33243891
    600317 7a5f:g3 (4.4) BS01 rna ? GO:0003735 ... Q13405 33243891
    600318 7a5f:i3 (4.4) BS01 rna ? GO:0003735 ... Q4U2R6 33243891
    600319 7a5f:j3 (4.4) BS01 rna ? GO:0003735 ... Q86TS9 33243891
    600320 7a5f:n (4.4) BS01 rna ? GO:0000049 ... P27150 33243891
    600321 7a5f:n (4.4) BS02 rna ? GO:0000049 ... P27150 33243891
    600322 7a5f:n (4.4) BS03 MG ? GO:0000049 ... P27150 33243891
    600323 7a5f:o3 (4.4) BS01 rna ? GO:0003735 ... Q9BQC6 33243891
    600324 7a5f:q3 (4.4) BS01 rna ? GO:0005515 ... Q8TAE8 33243891
    600325 7a5f:r3 (4.4) BS01 rna ? GO:0003735 ... Q9NVS2 33243891
    600326 7a5f:r3 (4.4) BS02 ZN ? GO:0003735 ... Q9NVS2 33243891
    600327 7a5f:s3 (4.4) BS01 rna ? GO:0003723 ... Q9NP92 33243891
    600328 7a5g:03 (4.33) BS01 rna ? GO:0003723 ... Q9BYC8 33243891
    600329 7a5g:03 (4.33) BS02 ZN ? GO:0003723 ... Q9BYC8 33243891
    600330 7a5g:13 (4.33) BS01 rna ? GO:0003735 ... O75394 33243891
    600331 7a5g:23 (4.33) BS01 rna ? GO:0003735 ... Q9BQ48 33243891
    600332 7a5g:33 (4.33) BS01 rna ? GO:0003735 ... Q9NZE8 33243891
    600333 7a5g:43 (4.33) BS01 rna ? GO:0003735 ... Q9P0J6 33243891
    600334 7a5g:43 (4.33) BS02 ZN ? GO:0003735 ... Q9P0J6 33243891
    600335 7a5g:53 (4.33) BS01 rna ? GO:0003723 ... Q9BZE1 33243891
    600336 7a5g:63 (4.33) BS01 rna ? GO:0005515 ... Q96DV4 33243891
    600337 7a5g:63 (4.33) BS02 rna ? GO:0005515 ... Q96DV4 33243891
    600338 7a5g:93 (4.33) BS01 rna ? GO:0003723 ... Q8IXM3 33243891
    600339 7a5g:A (4.33) BS01 rna ? GO:0003723 ... Q9NQ50 33243891
    600340 7a5g:A (4.33) BS02 rna ? GO:0003723 ... Q9NQ50 33243891
    600341 7a5g:B6 (4.33) BS01 rna ? GO:0003735 ... Q9Y399 33243891
    600342 7a5g:B6 (4.33) BS02 ZN ? GO:0003735 ... Q9Y399 33243891
    600343 7a5g:C6 (4.33) BS01 rna ? GO:0003723 ... Q96EL2 33243891
    600344 7a5g:D (4.33) BS01 rna ? GO:0003723 ... Q9BYD2 33243891
    600345 7a5g:D3 (4.33) BS01 rna ? GO:0003723 ... Q5T653 33243891
    600346 7a5g:D6 (4.33) BS01 rna ? GO:0003723 ... P82675 33243891
    600347 7a5g:E3 (4.33) BS01 rna ? GO:0003723 ... P09001 33243891
    600348 7a5g:E6 (4.33) BS01 rna ? GO:0003735 ... P82932 33243891
    600349 7a5g:F3 (4.33) BS01 rna ? GO:0003723 ... Q9BYD3 33243891
    600350 7a5g:F6 (4.33) BS01 rna ? GO:0000028 ... Q9Y2R9 33243891
    600351 7a5g:F6 (4.33) BS02 rna ? GO:0000028 ... Q9Y2R9 33243891
    600352 7a5g:F6 (4.33) BS03 rna ? GO:0000028 ... Q9Y2R9 33243891
    600353 7a5g:G6 (4.33) BS01 rna ? GO:0003723 ... P82933 33243891
    600354 7a5g:H3 (4.33) BS01 rna ? GO:0003723 ... Q9BYD2 33243891
    600355 7a5g:H6 (4.33) BS01 rna ? GO:0005739 ... P82664 33243891
    600356 7a5g:I3 (4.33) BS01 rna ? GO:0003723 ... Q7Z7H8 33243891
    600357 7a5g:I3 (4.33) BS02 peptide ? GO:0003723 ... Q7Z7H8 33243891
    600358 7a5g:I6 (4.33) BS01 rna ? GO:0003723 ... P82912 33243891
    600359 7a5g:J3 (4.33) BS01 rna ? GO:0003723 ... Q9Y3B7 33243891
    600360 7a5g:J6 (4.33) BS01 rna ? GO:0003723 ... O15235 33243891
    600361 7a5g:K3 (4.33) BS01 rna ? GO:0003723 ... Q9BYD1 33243891
    600362 7a5g:K6 (4.33) BS01 rna ? GO:0003723 ... O60783 33243891
    600363 7a5g:L3 (4.33) BS01 rna ? GO:0003723 ... Q6P1L8 33243891
    600364 7a5g:L6 (4.33) BS01 rna ? GO:0003723 ... P82914 33243891
    600365 7a5g:M3 (4.33) BS01 rna ? GO:0003723 ... Q9P015 33243891
    600366 7a5g:M6 (4.33) BS01 rna ? GO:0003735 ... Q9Y3D3 33243891
    600367 7a5g:N3 (4.33) BS01 rna ? GO:0003735 ... Q9NX20 33243891
    600368 7a5g:N6 (4.33) BS01 rna ? GO:0003735 ... Q9Y2R5 33243891
    600369 7a5g:O3 (4.33) BS01 rna ? GO:0003735 ... Q9NRX2 33243891
    600370 7a5g:O6 (4.33) BS01 rna ? GO:0003735 ... Q9Y676 33243891
    600371 7a5g:O6 (4.33) BS02 ZN ? GO:0003735 ... Q9Y676 33243891
    600372 7a5g:P3 (4.33) BS01 rna ? GO:0003723 ... Q9H0U6 33243891
    600373 7a5g:P6 (4.33) BS01 rna ? GO:0003735 ... Q9Y3D5 33243891
    600374 7a5g:Q3 (4.33) BS01 rna ? GO:0003735 ... P49406 33243891
    600375 7a5g:Q6 (4.33) BS01 rna ? GO:0003723 ... P82921 33243891
    600376 7a5g:R3 (4.33) BS01 rna ? GO:0003723 ... Q9BYC9 33243891
    600377 7a5g:S3 (4.33) BS01 rna ? GO:0003723 ... Q7Z2W9 33243891
    600378 7a5g:S6 (4.33) BS01 rna ? GO:0003723 ... Q9Y3D9 33243891
    600379 7a5g:T3 (4.33) BS01 rna ? GO:0003723 ... Q9NWU5 33243891
    600380 7a5g:T6 (4.33) BS01 rna ? GO:0003735 ... P82663 33243891
    600381 7a5g:U3 (4.33) BS01 rna ? GO:0001650 ... Q16540 33243891
    600382 7a5g:U6 (4.33) BS01 rna ? GO:0003723 ... Q9BYN8 33243891
    600383 7a5g:V3 (4.33) BS01 rna ? GO:0003723 ... Q96A35 33243891
    600384 7a5g:V6 (4.33) BS01 rna ? GO:0000049 ... Q92552 33243891
    600385 7a5g:W3 (4.33) BS01 rna ? GO:0003723 ... Q9P0M9 33243891
    600386 7a5g:X3 (4.33) BS01 rna ? GO:0003723 ... Q13084 33243891
    600387 7a5g:X3 (4.33) BS02 rna ? GO:0003723 ... Q13084 33243891
    600388 7a5g:X6 (4.33) BS01 rna ? GO:0003723 ... P51398 33243891
    600389 7a5g:X6 (4.33) BS02 GDP ? GO:0003723 ... P51398 33243891
    600390 7a5g:Y3 (4.33) BS01 rna ? GO:0003735 ... Q9HD33 33243891
    600391 7a5g:Z (4.33) BS01 rna ? GO:0000287 ... P49411 33243891
    600392 7a5g:Z (4.33) BS02 rna ? GO:0000287 ... P49411 33243891
    600393 7a5g:Z3 (4.33) BS01 rna ? GO:0003735 ... Q8TCC3 33243891
    600394 7a5g:Z6 (4.33) BS01 rna ? GO:0003735 ... Q9Y291 33243891
    600395 7a5g:a3 (4.33) BS01 rna ? GO:0003723 ... Q9Y6G3 33243891
    600396 7a5g:a6 (4.33) BS01 rna ? GO:0003735 ... P82930 33243891
    600397 7a5g:b3 (4.33) BS01 rna ? GO:0003723 ... Q8N983 33243891
    600398 7a5g:c3 (4.33) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 33243891
    600399 7a5g:c6 (4.33) BS01 rna ? GO:0001650 ... Q96BP2 33243891
    600400 7a5g:d6 (4.33) BS01 rna ? GO:0005515 ... Q9NWT8 33243891

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).