SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    600401 7a5g:f3 (4.33) BS01 rna ? GO:0005515 ... Q96GC5 33243891
    600402 7a5g:f3 (4.33) BS02 rna ? GO:0005515 ... Q96GC5 33243891
    600403 7a5g:g3 (4.33) BS01 rna ? GO:0003735 ... Q13405 33243891
    600404 7a5g:i3 (4.33) BS01 rna ? GO:0003735 ... Q4U2R6 33243891
    600405 7a5g:j3 (4.33) BS01 rna ? GO:0003735 ... Q86TS9 33243891
    600406 7a5g:n (4.33) BS01 rna ? GO:0000049 ... P27150 33243891
    600407 7a5g:n (4.33) BS02 rna ? GO:0000049 ... P27150 33243891
    600408 7a5g:n (4.33) BS03 MG ? GO:0000049 ... P27150 33243891
    600409 7a5g:o3 (4.33) BS01 rna ? GO:0003735 ... Q9BQC6 33243891
    600410 7a5g:q3 (4.33) BS01 rna ? GO:0005515 ... Q8TAE8 33243891
    600411 7a5g:r3 (4.33) BS01 rna ? GO:0003735 ... Q9NVS2 33243891
    600412 7a5g:r3 (4.33) BS02 ZN ? GO:0003735 ... Q9NVS2 33243891
    600413 7a5g:s3 (4.33) BS01 rna ? GO:0003723 ... Q9NP92 33243891
    600414 7a5h:0 (3.3) BS01 rna ? GO:0003723 ... Q9BYC8 33243891
    600415 7a5h:0 (3.3) BS02 ZN ? GO:0003723 ... Q9BYC8 33243891
    600416 7a5h:1 (3.3) BS01 rna ? GO:0003735 ... O75394 33243891
    600417 7a5h:2 (3.3) BS01 rna ? GO:0003735 ... Q9BQ48 33243891
    600418 7a5h:3 (3.3) BS01 rna ? GO:0003735 ... Q9NZE8 33243891
    600419 7a5h:5 (3.3) BS01 rna ? GO:0003723 ... Q9BZE1 33243891
    600420 7a5h:6 (3.3) BS01 rna ? GO:0005515 ... Q96DV4 33243891
    600421 7a5h:6 (3.3) BS02 rna ? GO:0005515 ... Q96DV4 33243891
    600422 7a5h:8 (3.3) BS01 rna ? GO:0003723 ... Q9NQ50 33243891
    600423 7a5h:9 (3.3) BS01 rna ? GO:0003723 ... Q8IXM3 33243891
    600424 7a5h:C (3.3) BS01 rna ? GO:0000049 ... Q9H3J6 33243891
    600425 7a5h:C (3.3) BS02 rna ? GO:0000049 ... Q9H3J6 33243891
    600426 7a5h:D (3.3) BS01 rna ? GO:0003723 ... Q5T653 33243891
    600427 7a5h:E (3.3) BS01 rna ? GO:0003723 ... P09001 33243891
    600428 7a5h:F (3.3) BS01 rna ? GO:0003723 ... Q9BYD3 33243891
    600429 7a5h:F (3.3) BS02 MG ? GO:0003723 ... Q9BYD3 33243891
    600430 7a5h:G (3.3) BS01 rna ? GO:0000049 ... Q9P0P8 33243891
    600431 7a5h:G (3.3) BS02 rna ? GO:0000049 ... Q9P0P8 33243891
    600432 7a5h:H (3.3) BS01 rna ? GO:0003723 ... Q9BYD2 33243891
    600433 7a5h:I (3.3) BS01 peptide ? GO:0003723 ... Q7Z7H8 33243891
    600434 7a5h:I (3.3) BS02 rna ? GO:0003723 ... Q7Z7H8 33243891
    600435 7a5h:J (3.3) BS01 rna ? GO:0003723 ... Q9Y3B7 33243891
    600436 7a5h:K (3.3) BS01 rna ? GO:0003723 ... Q9BYD1 33243891
    600437 7a5h:L (3.3) BS01 rna ? GO:0003723 ... Q6P1L8 33243891
    600438 7a5h:M (3.3) BS01 rna ? GO:0003723 ... Q9P015 33243891
    600439 7a5h:N (3.3) BS01 peptide ? GO:0003735 ... Q9NX20 33243891
    600440 7a5h:N (3.3) BS02 rna ? GO:0003735 ... Q9NX20 33243891
    600441 7a5h:O (3.3) BS01 rna ? GO:0003735 ... Q9NRX2 33243891
    600442 7a5h:P (3.3) BS01 rna ? GO:0003735 ... A8K9D2 33243891
    600443 7a5h:P (3.3) BS02 rna ? GO:0003735 ... A8K9D2 33243891
    600444 7a5h:Q (3.3) BS01 rna ? GO:0003735 ... P49406 33243891
    600445 7a5h:R (3.3) BS01 rna ? GO:0003723 ... Q9BYC9 33243891
    600446 7a5h:S (3.3) BS01 rna ? GO:0003723 ... Q7Z2W9 33243891
    600447 7a5h:T (3.3) BS01 rna ? GO:0003735 ... E7ESL0 33243891
    600448 7a5h:U (3.3) BS01 rna ? GO:0001650 ... Q16540 33243891
    600449 7a5h:V (3.3) BS01 rna ? GO:0003723 ... Q96A35 33243891
    600450 7a5h:V (3.3) BS02 peptide ? GO:0003723 ... Q96A35 33243891
    600451 7a5h:W (3.3) BS01 rna ? GO:0003723 ... Q9P0M9 33243891
    600452 7a5h:X (3.3) BS01 rna ? GO:0003723 ... Q13084 33243891
    600453 7a5h:Y (3.3) BS01 rna ? GO:0003735 ... Q9HD33 33243891
    600454 7a5h:Z (3.3) BS01 rna ? GO:0003735 ... Q8TCC3 33243891
    600455 7a5h:a (3.3) BS01 rna ? GO:0003723 ... Q9Y6G3 33243891
    600456 7a5h:b (3.3) BS01 rna ? GO:0003735 ... Q8N983 33243891
    600457 7a5h:c (3.3) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 33243891
    600458 7a5h:d (3.3) BS01 rna ? GO:0003723 ... Q9BRJ2 33243891
    600459 7a5h:f (3.3) BS01 rna ? GO:0005515 ... Q96GC5 33243891
    600460 7a5h:f (3.3) BS02 rna ? GO:0005515 ... Q96GC5 33243891
    600461 7a5h:g (3.3) BS01 rna ? GO:0003735 ... Q13405 33243891
    600462 7a5h:i (3.3) BS01 rna ? GO:0003735 ... Q4U2R6 33243891
    600463 7a5h:j (3.3) BS01 rna ? GO:0003735 ... A8K7J6 33243891
    600464 7a5h:o (3.3) BS01 rna ? GO:0003735 ... Q9BQC6 33243891
    600465 7a5h:r (3.3) BS01 rna ? GO:0003735 ... Q9NVS2 33243891
    600466 7a5h:s (3.3) BS01 rna ? GO:0003723 ... Q9NP92 33243891
    600467 7a5h:u (3.3) BS01 rna ? GO:0005515 ... Q96EH3 33243891
    600468 7a5h:v (3.3) BS01 PNS ? GO:0000266 ... L0R8F8 33243891
    600469 7a5h:w (3.3) BS01 PNS ? GO:0000035 ... O14561 33243891
    600470 7a5i:03 (3.7) BS01 rna ? GO:0003723 ... Q9BYC8 33243891
    600471 7a5i:03 (3.7) BS02 ZN ? GO:0003723 ... Q9BYC8 33243891
    600472 7a5i:13 (3.7) BS01 rna ? GO:0003735 ... O75394 33243891
    600473 7a5i:23 (3.7) BS01 rna ? GO:0003735 ... Q9BQ48 33243891
    600474 7a5i:33 (3.7) BS01 rna ? GO:0003735 ... Q9NZE8 33243891
    600475 7a5i:43 (3.7) BS01 rna ? GO:0003735 ... Q9P0J6 33243891
    600476 7a5i:43 (3.7) BS02 ZN ? GO:0003735 ... Q9P0J6 33243891
    600477 7a5i:53 (3.7) BS01 rna ? GO:0003723 ... Q9BZE1 33243891
    600478 7a5i:63 (3.7) BS01 rna ? GO:0005515 ... Q96DV4 33243891
    600479 7a5i:63 (3.7) BS02 rna ? GO:0005515 ... Q96DV4 33243891
    600480 7a5i:83 (3.7) BS01 rna ? GO:0003723 ... Q9NQ50 33243891
    600481 7a5i:93 (3.7) BS01 rna ? GO:0003723 ... Q8IXM3 33243891
    600482 7a5i:B6 (3.7) BS01 rna ? GO:0003735 ... Q9Y399 33243891
    600483 7a5i:B6 (3.7) BS02 ZN ? GO:0003735 ... Q9Y399 33243891
    600484 7a5i:C6 (3.7) BS01 rna ? GO:0003723 ... Q96EL2 33243891
    600485 7a5i:D3 (3.7) BS01 rna ? GO:0003723 ... Q5T653 33243891
    600486 7a5i:D6 (3.7) BS01 rna ? GO:0003723 ... P82675 33243891
    600487 7a5i:E3 (3.7) BS01 rna ? GO:0003723 ... P09001 33243891
    600488 7a5i:E6 (3.7) BS01 rna ? GO:0003735 ... P82932 33243891
    600489 7a5i:F3 (3.7) BS01 rna ? GO:0003723 ... Q9BYD3 33243891
    600490 7a5i:F6 (3.7) BS01 rna ? GO:0000028 ... Q9Y2R9 33243891
    600491 7a5i:F6 (3.7) BS02 rna ? GO:0000028 ... Q9Y2R9 33243891
    600492 7a5i:F6 (3.7) BS03 rna ? GO:0000028 ... Q9Y2R9 33243891
    600493 7a5i:G6 (3.7) BS01 rna ? GO:0003723 ... P82933 33243891
    600494 7a5i:H3 (3.7) BS01 rna ? GO:0003723 ... Q9BYD2 33243891
    600495 7a5i:H6 (3.7) BS01 rna ? GO:0005739 ... P82664 33243891
    600496 7a5i:I3 (3.7) BS01 rna ? GO:0003723 ... Q7Z7H8 33243891
    600497 7a5i:I3 (3.7) BS02 peptide ? GO:0003723 ... Q7Z7H8 33243891
    600498 7a5i:I6 (3.7) BS01 rna ? GO:0003723 ... P82912 33243891
    600499 7a5i:J3 (3.7) BS01 rna ? GO:0003723 ... Q9Y3B7 33243891
    600500 7a5i:J6 (3.7) BS01 rna ? GO:0003723 ... O15235 33243891
    600501 7a5i:K3 (3.7) BS01 rna ? GO:0003723 ... Q9BYD1 33243891
    600502 7a5i:K6 (3.7) BS01 rna ? GO:0003723 ... O60783 33243891
    600503 7a5i:L3 (3.7) BS01 rna ? GO:0003723 ... Q6P1L8 33243891
    600504 7a5i:L6 (3.7) BS01 rna ? GO:0003723 ... P82914 33243891
    600505 7a5i:M3 (3.7) BS01 rna ? GO:0003723 ... Q9P015 33243891
    600506 7a5i:M6 (3.7) BS01 rna ? GO:0003735 ... Q9Y3D3 33243891
    600507 7a5i:N3 (3.7) BS01 rna ? GO:0003735 ... Q9NX20 33243891
    600508 7a5i:N3 (3.7) BS02 peptide ? GO:0003735 ... Q9NX20 33243891
    600509 7a5i:N6 (3.7) BS01 rna ? GO:0003735 ... Q9Y2R5 33243891
    600510 7a5i:O3 (3.7) BS01 rna ? GO:0003735 ... Q9NRX2 33243891
    600511 7a5i:O6 (3.7) BS01 rna ? GO:0003735 ... Q9Y676 33243891
    600512 7a5i:P3 (3.7) BS01 rna ? GO:0003735 ... A8K9D2 33243891
    600513 7a5i:P3 (3.7) BS02 rna ? GO:0003735 ... A8K9D2 33243891
    600514 7a5i:P6 (3.7) BS01 rna ? GO:0003735 ... Q9Y3D5 33243891
    600515 7a5i:Q3 (3.7) BS01 rna ? GO:0003735 ... P49406 33243891
    600516 7a5i:Q6 (3.7) BS01 rna ? GO:0003723 ... P82921 33243891
    600517 7a5i:R3 (3.7) BS01 rna ? GO:0003723 ... Q9BYC9 33243891
    600518 7a5i:S3 (3.7) BS01 rna ? GO:0003723 ... Q7Z2W9 33243891
    600519 7a5i:S6 (3.7) BS01 rna ? GO:0003723 ... Q9Y3D9 33243891
    600520 7a5i:T3 (3.7) BS01 rna ? GO:0003735 ... E7ESL0 33243891
    600521 7a5i:T6 (3.7) BS01 rna ? GO:0003735 ... P82663 33243891
    600522 7a5i:U3 (3.7) BS01 rna ? GO:0001650 ... Q16540 33243891
    600523 7a5i:U6 (3.7) BS01 rna ? GO:0003723 ... Q9BYN8 33243891
    600524 7a5i:V3 (3.7) BS01 rna ? GO:0003723 ... Q96A35 33243891
    600525 7a5i:V6 (3.7) BS01 rna ? GO:0000049 ... Q92552 33243891
    600526 7a5i:W3 (3.7) BS01 rna ? GO:0003723 ... Q9P0M9 33243891
    600527 7a5i:X3 (3.7) BS01 rna ? GO:0003723 ... Q13084 33243891
    600528 7a5i:X6 (3.7) BS01 rna ? GO:0003723 ... P51398 33243891
    600529 7a5i:X6 (3.7) BS02 GDP ? GO:0003723 ... P51398 33243891
    600530 7a5i:Y3 (3.7) BS01 rna ? GO:0003735 ... Q9HD33 33243891
    600531 7a5i:Z3 (3.7) BS01 rna ? GO:0003735 ... Q8TCC3 33243891
    600532 7a5i:Z6 (3.7) BS01 rna ? GO:0003735 ... Q9Y291 33243891
    600533 7a5i:a3 (3.7) BS01 rna ? GO:0003723 ... Q9Y6G3 33243891
    600534 7a5i:a6 (3.7) BS01 rna ? GO:0003735 ... P82930 33243891
    600535 7a5i:b3 (3.7) BS01 rna ? GO:0003735 ... Q8N983 33243891
    600536 7a5i:b6 (3.7) BS01 rna ? GO:0003723 ... P82673 33243891
    600537 7a5i:c3 (3.7) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 33243891
    600538 7a5i:c6 (3.7) BS01 rna ? GO:0001650 ... Q96BP2 33243891
    600539 7a5i:d6 (3.7) BS01 rna ? GO:0005515 ... Q9NWT8 33243891
    600540 7a5i:d6 (3.7) BS02 rna ? GO:0005515 ... Q9NWT8 33243891
    600541 7a5i:f3 (3.7) BS01 rna ? GO:0005515 ... Q96GC5 33243891
    600542 7a5i:f3 (3.7) BS02 rna ? GO:0005515 ... Q96GC5 33243891
    600543 7a5i:g3 (3.7) BS01 rna ? GO:0003735 ... Q13405 33243891
    600544 7a5i:i3 (3.7) BS01 rna ? GO:0003735 ... Q4U2R6 33243891
    600545 7a5i:j3 (3.7) BS01 rna ? GO:0003735 ... A8K7J6 33243891
    600546 7a5i:m3 (3.7) BS01 rna ? GO:0003735 ... Q7Z7F7 33243891
    600547 7a5i:o3 (3.7) BS01 rna ? GO:0003735 ... Q9BQC6 33243891
    600548 7a5i:q3 (3.7) BS01 rna ? GO:0005515 ... Q8TAE8 33243891
    600549 7a5i:r3 (3.7) BS01 rna ? GO:0003735 ... Q9NVS2 33243891
    600550 7a5i:s3 (3.7) BS01 rna ? GO:0003723 ... Q9NP92 33243891
    600551 7a5j:0 (3.1) BS01 rna ? GO:0003723 ... Q9BYC8 33243891
    600552 7a5j:0 (3.1) BS02 ZN ? GO:0003723 ... Q9BYC8 33243891
    600553 7a5j:1 (3.1) BS01 rna ? GO:0003735 ... O75394 33243891
    600554 7a5j:1 (3.1) BS02 rna ? GO:0003735 ... O75394 33243891
    600555 7a5j:2 (3.1) BS01 rna ? GO:0003735 ... Q9BQ48 33243891
    600556 7a5j:3 (3.1) BS01 rna ? GO:0003735 ... Q9NZE8 33243891
    600557 7a5j:4 (3.1) BS01 rna ? GO:0003735 ... Q9P0J6 33243891
    600558 7a5j:4 (3.1) BS02 ZN ? GO:0003735 ... Q9P0J6 33243891
    600559 7a5j:5 (3.1) BS01 rna ? GO:0003723 ... Q9BZE1 33243891
    600560 7a5j:6 (3.1) BS01 rna ? GO:0005515 ... Q96DV4 33243891
    600561 7a5j:6 (3.1) BS02 rna ? GO:0005515 ... Q96DV4 33243891
    600562 7a5j:8 (3.1) BS01 rna ? GO:0003723 ... Q9NQ50 33243891
    600563 7a5j:9 (3.1) BS01 rna ? GO:0003723 ... Q8IXM3 33243891
    600564 7a5j:C (3.1) BS01 rna ? GO:0003723 ... Q9BYD2 33243891
    600565 7a5j:D (3.1) BS01 rna ? GO:0003723 ... Q5T653 33243891
    600566 7a5j:E (3.1) BS01 rna ? GO:0003723 ... P09001 33243891
    600567 7a5j:F (3.1) BS01 rna ? GO:0003723 ... Q9BYD3 33243891
    600568 7a5j:H (3.1) BS01 rna ? GO:0003723 ... Q9BYD2 33243891
    600569 7a5j:I (3.1) BS01 peptide ? GO:0003723 ... Q7Z7H8 33243891
    600570 7a5j:I (3.1) BS02 rna ? GO:0003723 ... Q7Z7H8 33243891
    600571 7a5j:J (3.1) BS01 rna ? GO:0003723 ... Q9Y3B7 33243891
    600572 7a5j:K (3.1) BS01 rna ? GO:0003723 ... Q9BYD1 33243891
    600573 7a5j:L (3.1) BS01 rna ? GO:0003723 ... Q6P1L8 33243891
    600574 7a5j:M (3.1) BS01 rna ? GO:0003723 ... Q9P015 33243891
    600575 7a5j:N (3.1) BS01 rna ? GO:0003735 ... Q9NX20 33243891
    600576 7a5j:O (3.1) BS01 rna ? GO:0003735 ... Q9NRX2 33243891
    600577 7a5j:P (3.1) BS01 rna ? GO:0003723 ... Q9H0U6 33243891
    600578 7a5j:P (3.1) BS02 rna ? GO:0003723 ... Q9H0U6 33243891
    600579 7a5j:Q (3.1) BS01 rna ? GO:0003735 ... P49406 33243891
    600580 7a5j:R (3.1) BS01 rna ? GO:0003723 ... Q9BYC9 33243891
    600581 7a5j:S (3.1) BS01 rna ? GO:0003723 ... Q7Z2W9 33243891
    600582 7a5j:T (3.1) BS01 rna ? GO:0003735 ... E7ESL0 33243891
    600583 7a5j:U (3.1) BS01 rna ? GO:0001650 ... Q16540 33243891
    600584 7a5j:V (3.1) BS01 rna ? GO:0003723 ... Q96A35 33243891
    600585 7a5j:W (3.1) BS01 rna ? GO:0003723 ... Q9P0M9 33243891
    600586 7a5j:X (3.1) BS01 rna ? GO:0003723 ... Q13084 33243891
    600587 7a5j:X (3.1) BS02 rna ? GO:0003723 ... Q13084 33243891
    600588 7a5j:Y (3.1) BS01 rna ? GO:0003735 ... Q9HD33 33243891
    600589 7a5j:Z (3.1) BS01 rna ? GO:0003735 ... Q8TCC3 33243891
    600590 7a5j:a (3.1) BS01 rna ? GO:0003723 ... Q9Y6G3 33243891
    600591 7a5j:b (3.1) BS01 rna ? GO:0003735 ... Q8N983 33243891
    600592 7a5j:c (3.1) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 33243891
    600593 7a5j:d (3.1) BS01 rna ? GO:0003723 ... Q9BRJ2 33243891
    600594 7a5j:f (3.1) BS01 rna ? GO:0005515 ... Q96GC5 33243891
    600595 7a5j:f (3.1) BS02 rna ? GO:0005515 ... Q96GC5 33243891
    600596 7a5j:g (3.1) BS01 rna ? GO:0003735 ... Q13405 33243891
    600597 7a5j:i (3.1) BS01 rna ? GO:0003735 ... Q4U2R6 33243891
    600598 7a5j:j (3.1) BS01 rna ? GO:0003735 ... Q86TS9 33243891
    600599 7a5j:n (3.1) BS01 rna ? GO:0000049 ... P27150 33243891
    600600 7a5j:n (3.1) BS02 rna ? GO:0000049 ... P27150 33243891

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).